RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddA 
           21,609 sequences; 6,263,737 total letters

Searching..................................................done

Query= gi|254780176|ref|YP_003064589.1| hypothetical protein
CLIBASIA_00295 [Candidatus Liberibacter asiaticus str. psy62]
         (119 letters)



>gnl|CDD|36919 KOG1707, KOG1707, KOG1707, Predicted Ras related/Rac-GTP binding
           protein [Defense mechanisms].
          Length = 625

 Score = 24.5 bits (53), Expect = 6.6
 Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 15/57 (26%)

Query: 61  EKSKADAIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVETKEAGKTA 117
             S+A AI+    RK      + +RK               V    VV  K  GK+A
Sbjct: 399 AGSQASAIRVTRKRKLDRKKKQTDRK---------------VFQCFVVGPKNCGKSA 440


>gnl|CDD|34473 COG4864, COG4864, Uncharacterized protein conserved in bacteria
           [Function unknown].
          Length = 328

 Score = 24.2 bits (52), Expect = 9.3
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query: 2   AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAK 49
           A+L+T QAEAD  IA+AKA++    A        A+ +    ++ EA+
Sbjct: 231 AKLQTEQAEADKNIAQAKAEERRAMAVALEQEMRARVEEMRAKVVEAE 278


  Database: CddA
    Posted date:  Feb 4, 2011  9:38 PM
  Number of letters in database: 6,263,737
  Number of sequences in database:  21,609
  
Lambda     K      H
   0.302    0.116    0.279 

Gapped
Lambda     K      H
   0.267   0.0520    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 1,018,508
Number of extensions: 43605
Number of successful extensions: 120
Number of sequences better than 10.0: 1
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 47
Length of query: 119
Length of database: 6,263,737
Length adjustment: 81
Effective length of query: 38
Effective length of database: 4,513,408
Effective search space: 171509504
Effective search space used: 171509504
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 51 (23.9 bits)