HHsearch alignment for GI: 254780177 and conserved domain: PRK08330
>PRK08330 biotin--protein ligase; Provisional.
Probab=96.76 E-value=0.057 Score=33.43 Aligned_cols=119 Identities=23% Similarity=0.359 Sum_probs=71.4
Q ss_pred CCCEEEEECC-CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 6670786078-924777651210012038999999999999998862885324588721674166766655565642101
Q gi|254780177|r 89 RGGGYTYHGP-GQRIIYIMLNLAKRRKDLRCFVAALEEVIIRTLKILGIVGERREDRVGIWVVRLNKTRDNQLLLIEEKI 167 (257)
Q Consensus 89 RGG~iTyHGP-GQlV~Ypii~L~~~~~~v~~yv~~lE~~ii~~l~~~gI~~~~~~~~~GVWV~~~~~~~~~~~~~~~~KI 167 (257)
T Consensus 48 R~gr-~W~Sp~G~l~~S~~l~~~~~~~~~~~l~~~~~lav~~al~~~~~~~~iK------WPN--------DIl~~~kKl 112 (236)
T PRK08330 48 RKGR-KWESPEGGLWMSVVLKPKVSQKDLPKLVFLGALAVVDTLREFSIDARIK------WPN--------DVLVNYRKI 112 (236)
T ss_pred CCCC-CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE------CCC--------CEEECCCEE
T ss_conf 9969-8659999868999933688978888999999999999999839886376------785--------031579779
Q ss_pred EEHHEECCCCEEEEEEEEEECCCCHHHCCEEECCCCCCCCCCHH-HHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 00000004888998899995499135173410567978521289-91898899999999999999874
Q gi|254780177|r 168 AAIGIRIRKWISFHGLSLNISPDLSYYTGIVPCGISQHGVTSLK-ELGYSYSMKYIDTLIRKSFESVF 234 (257)
Q Consensus 168 asIGi~i~~~vT~HG~alNv~~dL~~F~~IvPCGl~~~~vTSl~-~lg~~i~~~ev~~~l~~~f~~~F 234 (257)
T Consensus 113 ~GILiE~~~~~vviGIGiNvn~~~p------------~~atsl~~~~~~~~~~~~l~~~l~~~l~~~~ 168 (236)
T PRK08330 113 AGVLVEGKGDFVILGIGLNVNNEAP------------DGATSMKEELGSEVPLLEVFRALITNLDRLY 168 (236)
T ss_pred EEEEEEEECCEEEEEEEEECCCCCC------------CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9997840389799999895598799------------4063799986899999999999999999999