HHsearch results for GI: 254780177 and protein with PDBid: 2p0l_A
>2p0l_A Lipoate-protein ligase A; PFAM, lopoate-protein ligase A, structural genomics, protein structure initiative, PSI-2; 2.04A {Streptococcus agalactiae COH1} SCOP: d.104.1.3
Probab=99.79 E-value=5.5e-17 Score=129.45 Aligned_cols=195 Identities=13% Similarity=0.027 Sum_probs=153.6
Q ss_pred ECCCCCHHH---HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCH-----H--HHCCCCCCEEEEECCCCEEEEE
Q ss_conf 088858899---99999999999973997878999806873774347885-----5--6105478249980566707860
Q gi|254780177|r 27 MDNPVDYEE---SQIIMEREIQRISLGNAEELVWLLEHPPLYTSGTSAIS-----D--DLLSPKSLPVYTTGRGGGYTYH 96 (257)
Q Consensus 27 ~~G~v~Y~~---al~~q~~~~~~v~~~~~~d~l~llEH~pVyT~G~~~~~-----~--dll~~~~ipv~~t~RGG~iTyH 96 (257)
.....+..+ .+++-+.++.++..+..+.+|.|-+|+|.+.+|++... . +.+...|+++++-..||+.+||
T Consensus 17 ~~~~~~~~d~~~~~a~~e~ll~~v~~~~~~~il~~w~~~ptVvlG~~q~~~p~~e~~~~~l~~~Gi~vvrR~sGGgaV~~ 96 (288)
T 2p0l_A 17 KDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDRELPHLELAKKEIISRGYEPVVRNFGGLAVVA 96 (288)
T ss_dssp ECCBCSGGGTTHHHHHHHHHHHHHHHSCSCEEEEECCBSSEEEECTTGGGCTTHHHHHHHHHTTTCEEEECTTCCSCEEE
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEE
T ss_conf 73158754665766899999998404689978999547997998986665730888799999879978996589872898
Q ss_pred CCCCEEEEEEECCC-CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-------CCEEEECCCCCCCCCCCCCCCCCCE
Q ss_conf 78924777651210-012038999999999999998862885324588-------7216741667666555656421010
Q gi|254780177|r 97 GPGQRIIYIMLNLA-KRRKDLRCFVAALEEVIIRTLKILGIVGERRED-------RVGIWVVRLNKTRDNQLLLIEEKIA 168 (257)
Q Consensus 97 GPGQlV~Ypii~L~-~~~~~v~~yv~~lE~~ii~~l~~~gI~~~~~~~-------~~GVWV~~~~~~~~~~~~~~~~KIa 168 (257)
+||+|..++|++-. ....++..+.+.+.++++++|+.+||++...+- ..-|++ ..+||+
T Consensus 97 d~G~l~~s~i~p~~~~~~~~i~~~y~~~~~~i~~aL~~lGi~a~~~~~~~~~c~g~~Dl~v-------------~grKi~ 163 (288)
T 2p0l_A 97 DEGILNFSLVIPDVFERKLSISDGYLIMVDFIRSIFSDFYQPIEHFEVETSYCPGKFDLSI-------------NGKKFA 163 (288)
T ss_dssp STTEEEEEEEEESCC---CCHHHHHHHHHHHHHHHTTTSCSCCEECCCTTSSSCCTTCEEE-------------TTEEEE
T ss_pred CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEE-------------CCEEEE
T ss_conf 8995599999616644579989999999999999999749851783367877857550768-------------887899
Q ss_pred EHHEECCCCEEEEEEEEEECCCCHHH----C-------------CEEECCCCCCCCCCHHH-HCCCCCHHHHHHHHHHHH
Q ss_conf 00000048889988999954991351----7-------------34105679785212899-189889999999999999
Q gi|254780177|r 169 AIGIRIRKWISFHGLSLNISPDLSYY----T-------------GIVPCGISQHGVTSLKE-LGYSYSMKYIDTLIRKSF 230 (257)
Q Consensus 169 sIGi~i~~~vT~HG~alNv~~dL~~F----~-------------~IvPCGl~~~~vTSl~~-lg~~i~~~ev~~~l~~~f 230 (257)
-.+-+..++..+|..+|.++.|+... + ...|+- ....||||.+ +|.+++++++.+.|++.|
T Consensus 164 G~AQrr~~~~~l~hgtllv~~d~~~~~~vl~~~~~~~~~~~~~~~~~~~~-~~~~vtsL~~~lg~~~t~eev~~~l~~~~ 242 (288)
T 2p0l_A 164 GLAQRRIKNGIAVSIYLSVCGDQKGRSQMISDFYKIGLGDTGSPIAYPNV-DPEIMANLSDLLDCPMTVEDVIDRMLISL 242 (288)
T ss_dssp EEEEEEETTEEEEEEEEECSSCHHHHHHHHHHHHHHHHTTTCCSSCCCCC-CTTSBCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred EEEEEEECCEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CHHHEEEHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 98899989989999999985788999999877777411443343357875-52002459997299999999999999999
Q ss_pred HHHHC
Q ss_conf 98746
Q gi|254780177|r 231 ESVFG 235 (257)
Q Consensus 231 ~~~Fg 235 (257)
.+.++
T Consensus 243 ~~~~~ 247 (288)
T 2p0l_A 243 KQVGF 247 (288)
T ss_dssp HHHTC
T ss_pred HHHCC
T ss_conf 98657