HHSEARCH alignment of GI: 254780177 and SCOP domain: d2p5ia1

Alignment
>d2p5ia1 d.104.1.3 (A:14-278) Hypothetical protein BH3822 {Bacillus halodurans [TaxId: 86665]}
Probab=99.90  E-value=1.3e-22  Score=164.50  Aligned_cols=199  Identities=14%  Similarity=0.022  Sum_probs=165.2

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCH-----H--HHCCCCCCEEEEECCCCEEEEECCCCEEE
Q ss_conf             5889999999999999973997878999806873774347885-----5--61054782499805667078607892477
Q gi|254780177|r   31 VDYEESQIIMEREIQRISLGNAEELVWLLEHPPLYTSGTSAIS-----D--DLLSPKSLPVYTTGRGGGYTYHGPGQRII  103 (257)
Q Consensus        31 v~Y~~al~~q~~~~~~v~~~~~~d~l~llEH~pVyT~G~~~~~-----~--dll~~~~ipv~~t~RGG~iTyHGPGQlV~  103 (257)
                      .|....++.++.+.+.+.++..+.+|.|.+|+|++|+|++.+.     .  +.+...++||++-.+||+.+||+|||+..
T Consensus        14 ~~~~~~~A~de~Ll~~~~~~~~~p~lr~~~~~ptv~lG~~q~~~~~~~~~~~~~~~~gi~vvRR~tGGgaV~hd~g~l~~   93 (265)
T d2p5ia1          14 FQALQSFAYDDTLCTSIGKSQSPPTLRAWVHHNTVVLGIQDSRLPQIKAGIEALKGFQHDVIVRNSGGLAVVLDSGILNL   93 (265)
T ss_dssp             SCHHHHHHHHHHHHHHHTTTSSCCEEEEECCSSEEEEEHHHHTSTTHHHHHHHHHHTTCEEEEESSCCCCEEECTTEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCEE
T ss_conf             89889779999999987468999889999519989989888888535667999997698199961899559976998189


Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC-------CCCEEEECCCCCCCCCCCCCCCCCCEEHHEECCC
Q ss_conf             765121001203899999999999999886288532458-------8721674166766655565642101000000048
Q gi|254780177|r  104 YIMLNLAKRRKDLRCFVAALEEVIIRTLKILGIVGERRE-------DRVGIWVVRLNKTRDNQLLLIEEKIAAIGIRIRK  176 (257)
Q Consensus       104 Ypii~L~~~~~~v~~yv~~lE~~ii~~l~~~gI~~~~~~-------~~~GVWV~~~~~~~~~~~~~~~~KIasIGi~i~~  176 (257)
                      ++|+.... ..++..+.+.+.++++++|+.+||++...+       +...||++             .+||+.++.+.++
T Consensus        94 s~i~~~~~-~~~~~~~y~~~~~~i~~~l~~lGi~a~~~~~~~~~c~g~~Dl~v~-------------g~Ki~G~Aq~~~~  159 (265)
T d2p5ia1          94 SLVLKEEK-GFSIDDGYELMYELICSMFQDHREQIEAREIVGSYCPGSYDLSID-------------GKKFAGISQRRIR  159 (265)
T ss_dssp             EEEEECCT-TCCHHHHHHHHHHHHHHHTC---CCCEECCCTTSSSCCTTCEEET-------------TEEEEEEEEEEET
T ss_pred             EEEECCCC-CCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEC-------------CEEEEEEEEEEEC
T ss_conf             99974344-531789999999999999997297427746667779887746888-------------8899987678988


Q ss_pred             CEEEEEEEEEECCCCHHHCCEE----------------ECCCCCCCCCCHHH-HCCCCCHHHHHHHHHHHHHHHHCHHHH
Q ss_conf             8899889999549913517341----------------05679785212899-189889999999999999987461110
Q gi|254780177|r  177 WISFHGLSLNISPDLSYYTGIV----------------PCGISQHGVTSLKE-LGYSYSMKYIDTLIRKSFESVFGPTIL  239 (257)
Q Consensus       177 ~vT~HG~alNv~~dL~~F~~Iv----------------PCGl~~~~vTSl~~-lg~~i~~~ev~~~l~~~f~~~Fg~~~~  239 (257)
                      +...|.-+|.++.|++....+.                .|......||||++ +|..++++++.+.+++.|.+.+++...
T Consensus       160 ~~~l~hgsll~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vtsL~~~l~~~~~~~~v~~~l~~~f~~~~~~l~~  239 (265)
T d2p5ia1         160 GGVAVQIYLCVSGSGAERAKMIRTFYDKAVAGQPTKFVYPRIKPETMASLSELLGQPHNVSDVLLKALMTLQQHGASLLT  239 (265)
T ss_dssp             TEEEEEEEEECSSCHHHHHHHHHHHHHHHHTTSCCSSCCCCCCGGGBCCHHHHHTSCCCHHHHHHHHHHHHHHTTCCCEE
T ss_pred             CEEEEEEEEEECCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf             88999989996489899999971232222113564334566422202769998489999999999999999985686501


Q ss_pred             CHHH
Q ss_conf             2331
Q gi|254780177|r  240 HEYA  243 (257)
Q Consensus       240 ~~~~  243 (257)
                      .+++
T Consensus       240 ~~lt  243 (265)
T d2p5ia1         240 ESLS  243 (265)
T ss_dssp             CCCC
T ss_pred             CCCC
T ss_conf             7889


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Class II aaRS and biotin synthetases
superfamily: Class II aaRS and biotin synthetases
family: LplA-like
domain: Hypothetical protein BH3822
species: Bacillus halodurans [TaxId: 86665]