HHSEARCH alignment of GI: 254780177 and SCOP domain: d2zgwa2

Alignment

Probab=97.89  E-value=0.00013  Score=47.61  Aligned_cols=121  Identities=21%  Similarity=0.200  Sum_probs=85.8

Q ss_pred             CCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             66707860789247776512100120389999999999999988628853245-88721674166766655565642101
Q gi|254780177|r   89 RGGGYTYHGPGQRIIYIMLNLAKRRKDLRCFVAALEEVIIRTLKILGIVGERR-EDRVGIWVVRLNKTRDNQLLLIEEKI  167 (257)
Q Consensus        89 RGG~iTyHGPGQlV~Ypii~L~~~~~~v~~yv~~lE~~ii~~l~~~gI~~~~~-~~~~GVWV~~~~~~~~~~~~~~~~KI  167 (257)
                      |.|..=..-+|.+.+-.++...........+.-..--++++++..|+++...+ |.  -|+++             ++||
T Consensus        48 R~gr~W~sp~g~l~~S~~~~~~~~~~~~~~l~~~~~~av~~~l~~~~~~~~iKWPN--DI~~~-------------~kKi  112 (188)
T d2zgwa2          48 ALNRKWESPEGGLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSIDGRIKWPN--DVLVN-------------YKAI  112 (188)
T ss_dssp             GGGCBCCCCTTSEEEEEEECCCSCTTTGGGHHHHHHHHHHHHHHHTTCCCEEETTT--EEEET-------------TEEE
T ss_pred             CCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC--HHEEC-------------CCCE
T ss_conf             79987869852213178862133124555566777777887643104102678742--21268-------------8723


Q ss_pred             EEHHEECCCCEEEEEEEEEECCCCHHHCCEEECCCCCCCCCCHH-HHCCCCCHHHHHHHHHHHHHHHHCH
Q ss_conf             00000004888998899995499135173410567978521289-9189889999999999999987461
Q gi|254780177|r  168 AAIGIRIRKWISFHGLSLNISPDLSYYTGIVPCGISQHGVTSLK-ELGYSYSMKYIDTLIRKSFESVFGP  236 (257)
Q Consensus       168 asIGi~i~~~vT~HG~alNv~~dL~~F~~IvPCGl~~~~vTSl~-~lg~~i~~~ev~~~l~~~f~~~Fg~  236 (257)
                      |-|=+--+.....-|+.+|++.++.            ..+|||. +++.+++.+++-..+..+|.+.|..
T Consensus       113 ~GILiE~~~~~~iiGiGiNvn~~~~------------~~atsl~~~~~~~~~~~~l~~~l~~~l~~~~~~  170 (188)
T d2zgwa2         113 AGVLVEGKGDKIVLGIGLNVNNKVP------------NGATSMKLELGSEVPLLSVFRSLITNLDRLYLN  170 (188)
T ss_dssp             EEEEEEESSSCEEEEEEECSSSCCC------------TTCCCHHHHHSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEECCCCEEEEEEEEECCCCCC------------CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             7998713466599988765488799------------875009998689999999999999999999999

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Class II aaRS and biotin synthetases
superfamily: Class II aaRS and biotin synthetases
family: Biotin holoenzyme synthetase
domain: Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]