HHsearch alignment for GI: 254780178 and conserved domain: PRK13533

>PRK13533 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Provisional.
Probab=100.00  E-value=0  Score=694.83  Aligned_cols=327  Identities=24%  Similarity=0.389  Sum_probs=305.2

Q ss_pred             CEEEEEEECCCCEEEEEEECCEEEECCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHCCCCHHHC
Q ss_conf             04999976499327999878875405857410686856886889998609989993226657387689986527420110
Q gi|254780178|r    5 FHFNLKAVSGSARLGEIITPRGVIKTPAFMPVGTAGTVKAMYFDQVRDLGADVILGNAYHLMLRPGAERIARLGGLHKFI   84 (378)
Q Consensus         5 ~~F~i~~~~~~aR~G~L~t~~g~i~TP~flpv~t~g~v~~lt~~~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gGlh~fl   84 (378)
T Consensus         1 ~~FEI~~~D~~aRiG~L~T~hG~IeTP~fmPV-inp~vk~i~p~el~~~Ga~iIItNtY~l~~rpg~~a~~~--GLH~fm   77 (486)
T PRK13533          1 GVFEIRDKDLAGRIGKLYTPHGVVETPALFPV-INPHKQEIPPEELKEFGFEALITNSYIIYRSERERALEK--GLHELL   77 (486)
T ss_pred             CCCEEEECCCCCCEEEEECCCCEEECCCCCCC-CCCCCCCCCHHHHHHHCCCEEEEECCCEECCCCHHHHHC--CHHHHC
T ss_conf             96568733576023789708946607853235-277457118999998179899310110002760667760--708760


Q ss_pred             CCCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCCCEEEECHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHH
Q ss_conf             15772241145432101221022333310210144541587129999999873289779960121332211589999999
Q gi|254780178|r   85 RWFKPILTDSGGFQVMSLSKLCSIDEQGVRFRSHIDGSLYRVSPEESVHIQNLLGSDIQMQLDECLALPAEDKELKRAME  164 (378)
Q Consensus        85 ~~~~~ilTDSGgfQv~sl~~~~~~~~~Gv~f~s~~dG~~~~ltpe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~sv~  164 (378)
T Consensus        78 ~wdgpImTDSGgFQv~~yG~V-------------------evtpeeiv~fQ~~IGSDI~m~lD~~t~~~~~~e~A~~sve  138 (486)
T PRK13533         78 GFDGVIMTDSGSYQLLVYGSV-------------------EVTNEEILEFQRKIGSDIGVPLDIPTGPDADREEAEEEVE  138 (486)
T ss_pred             CCCCCEEECCCCCEEEECCCE-------------------ECCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHH
T ss_conf             999973766887643563878-------------------4268999999998499889988618996999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCH--HHHHHHHHHHHHCCCHH
Q ss_conf             88999999988513588860554023444366899998876422234676641356-7516--78998999898507703
Q gi|254780178|r  165 LSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKELDLKGYAIGGLAV-GEPQ--EVMLHILSNVLPILPVE  241 (378)
Q Consensus       165 rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~G~aIgGl~~-ge~~--~~~~~ii~~~~~~LP~~  241 (378)
T Consensus       139 ~T~rrak~a~~~~~~-~~~~l~GpVQGg~y~DLR~~SA~~l~~l~FdgyaIGgvvplme~yry~~l~~~i~~ak~~lp~~  217 (486)
T PRK13533        139 ETLERAEEAAALIKD-DDMLWVGPVQGGTYPDLRERSAREASKLGFDIYPLGSPTPLMESYRYDELVDVVLAAKSGLSPG  217 (486)
T ss_pred             HHHHHHHHHHHHHCC-CCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCCC
T ss_conf             999999999986367-7877886316878699999999999868998705788718877614799999999997229999


Q ss_pred             HHEECCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHH
Q ss_conf             31002541018999999853898366200000233200245621002101232236885598669813368898999886
Q gi|254780178|r  242 RPHYLMGVGTPDDILKSVSYGVDMFDCVMPTRAGRHGLAFTRFGKINLRNARHIDDMRPLDAESHCSALRDYSRAYLHHL  321 (378)
Q Consensus       242 kPr~l~G~G~P~~i~~~v~~GvDlFD~~~ptr~Ar~G~~~t~~g~i~l~~~~~~~d~~pi~~~C~C~~C~~ytraYl~HL  321 (378)
T Consensus       218 ~PvHlFGaGHPm~f~lavAlG~DlFDSAsYalyArd~Rylt~~gT~~L~~l~~~--------Pc~cpvc~~ytp~el~~m  289 (486)
T PRK13533        218 APVHLFGAGHPMMFALAVALGCDLFDSASYALYARDGRYITRDGTYRLEDLEYL--------PCSCPVCSRYTPKELREM  289 (486)
T ss_pred             CCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCHHHCCCC--------CCCCCCCCCCCHHHHHHC
T ss_conf             971541588477899999957671436889988537946776666205431153--------667750367898999727


Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             85785089999999999999999999999998599899999999
Q gi|254780178|r  322 LRVNESLAGMILSWANLAYYQDLMKEIRSAIAEDCFVDFAMQTQ  365 (378)
Q Consensus       322 ~~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~~~  365 (378)
T Consensus       290 ---~~~er~~llA~HNL~v~~~Ei~~ikqaI~eg~Lwelve~r~  330 (486)
T PRK13533        290 ---PREERTRLLALHNLYVLFEEIRRIKQAIKEGRLWELVEERA  330 (486)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf             ---88789999999889999999999999987395999999997