HHsearch alignment for GI: 254780178 and conserved domain: PRK13534

>PRK13534 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Provisional.
Probab=100.00  E-value=0  Score=635.75  Aligned_cols=324  Identities=25%  Similarity=0.383  Sum_probs=304.0

Q ss_pred             EEEEEEECCCCEEEEEEECCEEEECCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHCCCCHHHCC
Q ss_conf             49999764993279998788754058574106868568868899986099899932266573876899865274201101
Q gi|254780178|r    6 HFNLKAVSGSARLGEIITPRGVIKTPAFMPVGTAGTVKAMYFDQVRDLGADVILGNAYHLMLRPGAERIARLGGLHKFIR   85 (378)
Q Consensus         6 ~F~i~~~~~~aR~G~L~t~~g~i~TP~flpv~t~g~v~~lt~~~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gGlh~fl~   85 (378)
T Consensus         1 mFEI~~~D~agRiG~L~t~~g~ieTP~~~PVi-np~~~~i~p~el~~~G~~~iITNsYi~~~~~~~~~~a~~~GlH~~l~   79 (630)
T PRK13534          1 MFEIKARDALGRIGKLKTNGKKIETPTIMPVI-NPKKQTVDPKELKKMGFDIVITNSYIIYKNPELREKALEKGIHSLID   79 (630)
T ss_pred             CCCEEECCCCCCEEEEECCCCCEECCCCCCCC-CCCCCCCCHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHCHHHHCC
T ss_conf             96046235661237897489626468310204-65536349999986186589750057750762346666404798718


Q ss_pred             CCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCCCEEEECHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHHH
Q ss_conf             57722411454321012210223333102101445415871299999998732897799601213322115899999998
Q gi|254780178|r   86 WFKPILTDSGGFQVMSLSKLCSIDEQGVRFRSHIDGSLYRVSPEESVHIQNLLGSDIQMQLDECLALPAEDKELKRAMEL  165 (378)
Q Consensus        86 ~~~~ilTDSGgfQv~sl~~~~~~~~~Gv~f~s~~dG~~~~ltpe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~sv~r  165 (378)
T Consensus        80 ~dg~ImTDSG~fQ~~~yG~v-------------------ev~~~eiv~fQ~~IGsDI~~~LD~pt~p~~~~e~a~~~v~~  140 (630)
T PRK13534         80 FDGPIMTDSGSFQLSVYGDV-------------------EVTNREIIEFQEKIGVDIGTILDIPTPPDVSREKAEEDLEE  140 (630)
T ss_pred             CCCCEEECCCCEEEEEECCE-------------------EECHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf             99857977886377773766-------------------20699999999985799888757789989899999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCH--HHHHHHHHHHHHCCCHHH
Q ss_conf             899999998851358886055402344436689999887642223467664135-67516--789989998985077033
Q gi|254780178|r  166 SLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKELDLKGYAIGGLA-VGEPQ--EVMLHILSNVLPILPVER  242 (378)
Q Consensus       166 T~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~G~aIgGl~-~ge~~--~~~~~ii~~~~~~LP~~k  242 (378)
T Consensus       141 T~~R~~ea~~~----~~~~l~gpvQGg~y~DLr~~sa~~~~~~~f~~y~iG~~vplme~yry~~l~~~i~~~k~~lp~~~  216 (630)
T PRK13534        141 TLERAKEAIEI----RELALNGTVQGSTYPDLRRKSAELMSKMNFDIYPIGAVVPLMESYRYRDLVDIIINSKMHLPTNK  216 (630)
T ss_pred             HHHHHHHHHHH----HCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHHCCCCCC
T ss_conf             99999986520----13646325568872889999999987479877634885056554258999999999973499998


Q ss_pred             HEECCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHH
Q ss_conf             10025410189999998538983662000002332002456210021012322368855986698133688989998868
Q gi|254780178|r  243 PHYLMGVGTPDDILKSVSYGVDMFDCVMPTRAGRHGLAFTRFGKINLRNARHIDDMRPLDAESHCSALRDYSRAYLHHLL  322 (378)
Q Consensus       243 Pr~l~G~G~P~~i~~~v~~GvDlFD~~~ptr~Ar~G~~~t~~g~i~l~~~~~~~d~~pi~~~C~C~~C~~ytraYl~HL~  322 (378)
T Consensus       217 pvHlfG~GhP~~~~~avalG~DlFDsaay~lyA~d~rylt~~gt~~l~~l~~~--------Pc~c~~c~~~tp~el~~m~  288 (630)
T PRK13534        217 PVHLFGAGHPMFFALAVALGCDLFDSASYALYAKDDRYLTPEGTLHLEDLKEF--------PCSCPVCSEYTPKELREMP  288 (630)
T ss_pred             CEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCEEHHHHCCC--------CCCCCCCCCCCHHHHHHCC
T ss_conf             60237888767889999957660205789987148807876444027760027--------7536552657989997388


Q ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf             578508999999999999999999999999859989999999
Q gi|254780178|r  323 RVNESLAGMILSWANLAYYQDLMKEIRSAIAEDCFVDFAMQT  364 (378)
Q Consensus       323 ~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~~  364 (378)
T Consensus       289 ~~---er~~llA~HNL~v~~~Ei~~vrqaI~~G~L~e~ve~r  327 (630)
T PRK13534        289 KE---ERTRLLAEHNLYVIFEEINRIKQAIKEGNLWELVEER  327 (630)
T ss_pred             HH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf             87---8999999867999999999999999748299999998