HHsearch alignment for GI: 254780178 and conserved domain: PRK13534
>PRK13534 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Provisional.
Probab=100.00 E-value=0 Score=635.75 Aligned_cols=324 Identities=25% Similarity=0.383 Sum_probs=304.0
Q ss_pred EEEEEEECCCCEEEEEEECCEEEECCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHCCCCHHHCC
Q ss_conf 49999764993279998788754058574106868568868899986099899932266573876899865274201101
Q gi|254780178|r 6 HFNLKAVSGSARLGEIITPRGVIKTPAFMPVGTAGTVKAMYFDQVRDLGADVILGNAYHLMLRPGAERIARLGGLHKFIR 85 (378)
Q Consensus 6 ~F~i~~~~~~aR~G~L~t~~g~i~TP~flpv~t~g~v~~lt~~~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gGlh~fl~ 85 (378)
T Consensus 1 mFEI~~~D~agRiG~L~t~~g~ieTP~~~PVi-np~~~~i~p~el~~~G~~~iITNsYi~~~~~~~~~~a~~~GlH~~l~ 79 (630)
T PRK13534 1 MFEIKARDALGRIGKLKTNGKKIETPTIMPVI-NPKKQTVDPKELKKMGFDIVITNSYIIYKNPELREKALEKGIHSLID 79 (630)
T ss_pred CCCEEECCCCCCEEEEECCCCCEECCCCCCCC-CCCCCCCCHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHCHHHHCC
T ss_conf 96046235661237897489626468310204-65536349999986186589750057750762346666404798718
Q ss_pred CCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCCCEEEECHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHHH
Q ss_conf 57722411454321012210223333102101445415871299999998732897799601213322115899999998
Q gi|254780178|r 86 WFKPILTDSGGFQVMSLSKLCSIDEQGVRFRSHIDGSLYRVSPEESVHIQNLLGSDIQMQLDECLALPAEDKELKRAMEL 165 (378)
Q Consensus 86 ~~~~ilTDSGgfQv~sl~~~~~~~~~Gv~f~s~~dG~~~~ltpe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~sv~r 165 (378)
T Consensus 80 ~dg~ImTDSG~fQ~~~yG~v-------------------ev~~~eiv~fQ~~IGsDI~~~LD~pt~p~~~~e~a~~~v~~ 140 (630)
T PRK13534 80 FDGPIMTDSGSFQLSVYGDV-------------------EVTNREIIEFQEKIGVDIGTILDIPTPPDVSREKAEEDLEE 140 (630)
T ss_pred CCCCEEECCCCEEEEEECCE-------------------EECHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 99857977886377773766-------------------20699999999985799888757789989899999999999
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCH--HHHHHHHHHHHHCCCHHH
Q ss_conf 899999998851358886055402344436689999887642223467664135-67516--789989998985077033
Q gi|254780178|r 166 SLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKELDLKGYAIGGLA-VGEPQ--EVMLHILSNVLPILPVER 242 (378)
Q Consensus 166 T~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~G~aIgGl~-~ge~~--~~~~~ii~~~~~~LP~~k 242 (378)
T Consensus 141 T~~R~~ea~~~----~~~~l~gpvQGg~y~DLr~~sa~~~~~~~f~~y~iG~~vplme~yry~~l~~~i~~~k~~lp~~~ 216 (630)
T PRK13534 141 TLERAKEAIEI----RELALNGTVQGSTYPDLRRKSAELMSKMNFDIYPIGAVVPLMESYRYRDLVDIIINSKMHLPTNK 216 (630)
T ss_pred HHHHHHHHHHH----HCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHHCCCCCC
T ss_conf 99999986520----13646325568872889999999987479877634885056554258999999999973499998
Q ss_pred HEECCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHH
Q ss_conf 10025410189999998538983662000002332002456210021012322368855986698133688989998868
Q gi|254780178|r 243 PHYLMGVGTPDDILKSVSYGVDMFDCVMPTRAGRHGLAFTRFGKINLRNARHIDDMRPLDAESHCSALRDYSRAYLHHLL 322 (378)
Q Consensus 243 Pr~l~G~G~P~~i~~~v~~GvDlFD~~~ptr~Ar~G~~~t~~g~i~l~~~~~~~d~~pi~~~C~C~~C~~ytraYl~HL~ 322 (378)
T Consensus 217 pvHlfG~GhP~~~~~avalG~DlFDsaay~lyA~d~rylt~~gt~~l~~l~~~--------Pc~c~~c~~~tp~el~~m~ 288 (630)
T PRK13534 217 PVHLFGAGHPMFFALAVALGCDLFDSASYALYAKDDRYLTPEGTLHLEDLKEF--------PCSCPVCSEYTPKELREMP 288 (630)
T ss_pred CEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCEEHHHHCCC--------CCCCCCCCCCCHHHHHHCC
T ss_conf 60237888767889999957660205789987148807876444027760027--------7536552657989997388
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 578508999999999999999999999999859989999999
Q gi|254780178|r 323 RVNESLAGMILSWANLAYYQDLMKEIRSAIAEDCFVDFAMQT 364 (378)
Q Consensus 323 ~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~~ 364 (378)
T Consensus 289 ~~---er~~llA~HNL~v~~~Ei~~vrqaI~~G~L~e~ve~r 327 (630)
T PRK13534 289 KE---ERTRLLAEHNLYVIFEEINRIKQAIKEGNLWELVEER 327 (630)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 87---8999999867999999999999999748299999998