HHsearch results for GI: 254780178 and protein with PDBid: 1rqb_A
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transferase; HET: KCX; 1.90A {Propionibacterium freudenreichiisubsp} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=94.27 E-value=0.3 Score=27.08 Aligned_cols=219 Identities=16% Similarity=0.176 Sum_probs=114.8
Q ss_pred HHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC-CCHHHHHHHHHHHHHH
Q ss_conf 999998732897799601213322115899999998899999998851358886055402344-4366899998876422
Q gi|254780178|r 130 ESVHIQNLLGSDIQMQLDECLALPAEDKELKRAMELSLRWAERSLVAFGNQPGKALFGIVQGG-DNINLRSFSAERLKEL 208 (378)
Q Consensus 130 ~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~sv~rT~~w~~~~~~~~~~~~~~~lfgiVqGG-~~~dLR~~Sa~~l~~~ 208 (378)
..++.-..-+-|++-.+|..... ...+.++ ..+++ ... .-+..+...-++ ..+|.-...++.+.+.
T Consensus 121 ~~v~~s~~~g~~~~r~~~~~~~~----~~~~~~~----~~~~~----~g~-~~~~~~~~~~~~~~~~~~~~~~a~~l~~~ 187 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVFDAMNDP----RNMAHAM----AAVKK----AGK-HAQGTICYTISPVHTVEGYVKLAGQLLDM 187 (539)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCT----HHHHHHH----HHHHH----TTC-EEEEEEECCCSTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCHHHCCCCHHHHH----HHHHHHH----HHHHH----CCC-EEEEEEEECCCCCCCHHHHHHHHHHHHHC
T ss_conf 99999998451666168679999----9889999----99997----699-56899995578877899999999998725
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHEECCCC----HHHHHHHHHHHCCCCEEEECCEEECCCCCCCCC--
Q ss_conf 23467664135675167899899989850770331002541----018999999853898366200000233200245--
Q gi|254780178|r 209 DLKGYAIGGLAVGEPQEVMLHILSNVLPILPVERPHYLMGV----GTPDDILKSVSYGVDMFDCVMPTRAGRHGLAFT-- 282 (378)
Q Consensus 209 ~~~G~aIgGl~~ge~~~~~~~ii~~~~~~LP~~kPr~l~G~----G~P~~i~~~v~~GvDlFD~~~ptr~Ar~G~~~t-- 282 (378)
+.+.+.|.--.....-+...+++..+...+|.+.|.++++- --....+.|++.|+|.|||+..-.-.+-|..-+
T Consensus 188 Gad~I~l~Dt~G~~~P~~v~~lv~~lk~~~~~~~~i~~H~Hnt~Gla~An~laAieaGad~vD~ai~glGg~tgnp~~E~ 267 (539)
T 1rqb_A 188 GADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDTAISSMSLGPGHNPTES 267 (539)
T ss_dssp TCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSBCBHHH
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHH
T ss_conf 98789955866665899999999999986586443256634887629999999998599999968656788888976999
Q ss_pred ------CCC---CHHHHH----HHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ------621---002101----2322368855986698133688989998868578508999999999999999999999
Q gi|254780178|r 283 ------RFG---KINLRN----ARHIDDMRPLDAESHCSALRDYSRAYLHHLLRVNESLAGMILSWANLAYYQDLMKEIR 349 (378)
Q Consensus 283 ------~~g---~i~l~~----~~~~~d~~pi~~~C~C~~C~~ytraYl~HL~~~~E~l~~~Ll~iHNl~~~~~~~~~iR 349 (378)
..| -+|+.. +.|..+..+.-....... .--+.-|.| ++=|..+ ..+..+.+
T Consensus 268 vv~~L~~~g~~t~id~~~l~~i~~~~~~~r~~y~~~~~~~-~~~~~v~~~------~~PGG~~---------snl~~q~~ 331 (539)
T 1rqb_A 268 VAEMLEGTGYTTNLDYDRLHKIRDHFKAIRPKYKKFESKT-LVDTSIFKS------QIPGGML---------SNMESQLR 331 (539)
T ss_dssp HHHHTTTSSEECCCCHHHHHHHHHHHHHHGGGGGGGCCSC-SCCCTHHHH------CCCHHHH---------HHHHHHHH
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCEEEEC------CCCCCCC---------CCHHHHHH
T ss_conf 9999863898887689999999999999998743576544-566501333------8984503---------56688998
Q ss_pred HHHHCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9998599899999999985327998665
Q gi|254780178|r 350 SAIAEDCFVDFAMQTQENWKKGDIPPIF 377 (378)
Q Consensus 350 ~aI~~g~f~~~~~~~~~~~~~~~~~~~~ 377 (378)
+.=..++|.+-.+++-+.++..-.|+.-
T Consensus 332 ~~g~~~~~~ev~~e~~~v~~~lG~~~~V 359 (539)
T 1rqb_A 332 AQGAEDKMDEVMAEVPRVRKAAGFPPLV 359 (539)
T ss_dssp TTSCCTTHHHHHHHHHHHHHHTTCCCCC
T ss_pred HCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 6784766999999999999976999730