Query gi|254780178|ref|YP_003064591.1| queuine tRNA-ribosyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 378
No_of_seqs 151 out of 1891
Neff 6.3
Searched_HMMs 13730
Date Mon May 23 06:39:44 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780178.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1r5ya_ c.1.20.1 (A:) Queosine 100.0 0 0 881.5 32.3 368 2-369 1-372 (372)
2 d1iq8a1 c.1.20.1 (A:6-360) Arc 100.0 0 0 755.0 20.1 329 3-366 1-332 (355)
3 d1xkya1 c.1.10.1 (A:1-292) Dih 89.4 0.34 2.5E-05 25.1 5.2 22 250-271 188-209 (292)
4 d1xxxa1 c.1.10.1 (A:5-300) Dih 86.4 0.72 5.2E-05 22.9 5.4 18 129-146 92-109 (296)
5 d1rqba2 c.1.10.5 (A:4-306) Tra 86.3 0.97 7.1E-05 22.0 7.8 88 193-280 158-249 (303)
6 d1hl2a_ c.1.10.1 (A:) N-acetyl 85.6 0.79 5.7E-05 22.6 5.3 18 129-146 87-104 (295)
7 d1nvma2 c.1.10.5 (A:2-290) 4-h 84.7 1.2 8.4E-05 21.5 12.3 136 132-282 98-238 (289)
8 d1o5ka_ c.1.10.1 (A:) Dihydrod 83.0 1.1 8E-05 21.7 5.1 30 242-271 182-211 (295)
9 d2a6na1 c.1.10.1 (A:1-292) Dih 76.5 2.2 0.00016 19.7 6.0 29 243-271 179-207 (292)
10 d1f74a_ c.1.10.1 (A:) N-acetyl 72.7 2.7 0.00019 19.1 5.1 18 129-146 89-106 (293)
11 d1geqa_ c.1.2.4 (A:) Trp synth 70.4 3 0.00022 18.7 7.3 120 125-267 94-218 (248)
12 d1rd5a_ c.1.2.4 (A:) Trp synth 69.1 3.2 0.00023 18.6 6.3 109 136-267 114-227 (261)
13 d1w3ia_ c.1.10.1 (A:) 2-keto-3 68.5 3.3 0.00024 18.5 6.0 19 128-146 80-98 (293)
14 d2btma_ c.1.1.1 (A:) Triosepho 58.3 5 0.00036 17.3 4.2 75 150-233 173-248 (251)
15 d1m6ja_ c.1.1.1 (A:) Triosepho 55.9 4.7 0.00034 17.5 3.2 19 127-145 81-99 (260)
16 d1mo0a_ c.1.1.1 (A:) Triosepho 53.8 5.9 0.00043 16.8 3.7 42 183-234 212-254 (257)
17 d1kv5a_ c.1.1.1 (A:) Triosepho 46.9 6.7 0.00049 16.4 2.8 21 209-232 226-246 (249)
18 d1vhca_ c.1.10.1 (A:) Hypothet 45.8 6 0.00044 16.7 2.4 73 183-273 65-137 (212)
19 d1mxsa_ c.1.10.1 (A:) KDPG ald 44.0 6.4 0.00046 16.6 2.3 46 219-273 95-140 (216)
20 d1gtea2 c.1.4.1 (A:533-844) Di 43.6 8.4 0.00061 15.7 8.2 41 226-267 241-282 (312)
21 d1o5xa_ c.1.1.1 (A:) Triosepho 43.1 5.9 0.00043 16.8 2.0 23 208-233 222-244 (246)
22 d1wbha1 c.1.10.1 (A:1-213) KDP 42.5 6.8 0.00049 16.4 2.3 46 219-273 93-138 (213)
23 d1n55a_ c.1.1.1 (A:) Triosepho 42.3 6.7 0.00049 16.4 2.2 23 208-233 225-247 (249)
24 d1b9ba_ c.1.1.1 (A:) Triosepho 41.6 6.1 0.00045 16.7 1.9 24 208-234 226-249 (252)
25 d1tx2a_ c.1.21.1 (A:) Dihydrop 40.6 9.3 0.00068 15.4 5.2 38 116-154 30-70 (273)
26 d1neya_ c.1.1.1 (A:) Triosepho 40.4 7 0.00051 16.3 2.1 74 150-233 171-245 (247)
27 d1xm3a_ c.1.31.1 (A:) Thiazole 38.4 10 0.00073 15.2 4.3 185 21-266 3-203 (251)
28 d1r2ra_ c.1.1.1 (A:) Triosepho 38.3 9.6 0.0007 15.4 2.5 24 206-232 220-243 (246)
29 d1ccwa_ c.23.6.1 (A:) Glutamat 38.2 10 0.00074 15.2 2.9 21 125-145 40-60 (137)
30 d1wv2a_ c.1.31.1 (A:) Thiazole 37.9 7.1 0.00052 16.2 1.8 185 22-266 4-205 (243)
31 d1trea_ c.1.1.1 (A:) Triosepho 37.3 10 0.00076 15.1 4.6 76 150-234 174-249 (255)
32 d1wa3a1 c.1.10.1 (A:2-203) KDP 36.3 11 0.00079 15.0 2.6 46 219-273 88-133 (202)
33 d1sr9a2 c.1.10.5 (A:61-370) 2- 35.8 11 0.0008 14.9 9.8 102 188-290 158-272 (310)
34 d1muma_ c.1.12.7 (A:) 2-methyl 30.5 13 0.00098 14.4 4.9 54 205-267 175-232 (289)
35 d1szia_ a.24.23.1 (A:) Mannose 29.4 14 0.001 14.3 3.5 17 227-243 196-212 (226)
36 d1qopa_ c.1.2.4 (A:) Trp synth 27.5 15 0.0011 14.1 7.0 120 125-267 108-232 (267)
37 d1jr8a_ a.24.15.1 (A:) Thiol o 26.8 6.6 0.00048 16.5 0.1 33 305-337 46-81 (105)
38 d1pvna1 c.1.5.1 (A:2-99,A:231- 26.3 16 0.0011 13.9 4.3 119 128-266 111-246 (362)
39 d1ajza_ c.1.21.1 (A:) Dihydrop 26.0 16 0.0012 13.9 4.2 50 117-167 27-79 (282)
40 d7reqb2 c.23.6.1 (B:476-638) M 25.8 15 0.0011 14.0 1.8 20 126-145 73-92 (163)
41 d1h6za1 c.1.12.2 (A:538-903) P 24.7 17 0.0012 13.7 4.2 47 227-274 295-346 (366)
42 d1q0qa3 d.81.1.3 (A:126-274) 1 23.4 13 0.00092 14.5 1.0 20 87-106 54-74 (149)
43 d1goxa_ c.1.4.1 (A:) Glycolate 23.4 18 0.0013 13.5 3.1 45 230-274 268-313 (359)
44 d1tb3a1 c.1.4.1 (A:1-349) Hydr 22.7 18 0.0013 13.5 2.6 73 201-274 230-306 (349)
45 d1r3sa_ c.1.22.1 (A:) Uroporph 21.5 19 0.0014 13.3 7.6 18 249-266 253-270 (356)
46 d1oqca_ a.24.15.1 (A:) Augment 21.3 8.3 0.0006 15.8 -0.3 18 304-321 47-64 (112)
47 d1a53a_ c.1.2.4 (A:) Indole-3- 20.8 20 0.0015 13.2 4.2 35 233-267 195-230 (247)
48 d1ea0a2 c.1.4.1 (A:423-1193) A 20.7 19 0.0014 13.3 1.5 27 248-274 650-676 (771)
49 d1aw1a_ c.1.1.1 (A:) Triosepho 20.2 21 0.0015 13.1 3.6 43 184-235 208-251 (255)
No 1
>d1r5ya_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
Probab=100.00 E-value=0 Score=881.47 Aligned_cols=368 Identities=55% Similarity=0.932 Sum_probs=361.1
Q ss_pred CCCCEEEEEEECCCCEEEEEEECCEEEECCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHCCCCH
Q ss_conf 88704999976499327999878875405857410686856886889998609989993226657387689986527420
Q gi|254780178|r 2 DKNFHFNLKAVSGSARLGEIITPRGVIKTPAFMPVGTAGTVKAMYFDQVRDLGADVILGNAYHLMLRPGAERIARLGGLH 81 (378)
Q Consensus 2 ~~~~~F~i~~~~~~aR~G~L~t~~g~i~TP~flpv~t~g~v~~lt~~~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gGlh 81 (378)
+.+|+|+|+++|++||+|+|.|+||+|+||+||||+|+|+||||+||+|+++|++++++||||++++||.+.+++.||||
T Consensus 1 ~~~~~Fei~~~d~~AR~G~L~~~~g~i~TP~fmpv~t~g~v~~ltpd~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gglh 80 (372)
T d1r5ya_ 1 RPRFSFSIAAREGKARTGTIEMKRGVIRTPAFMPVGTAATVKALKPETVRATGADIILGNTYHLMLRPGAERIAKLGGLH 80 (372)
T ss_dssp CCSCEEEEEEEETTEEEEEEEETTEEEEESEEECBCTTSSCTTCCHHHHHHTTCSCEEEEHHHHHHTTCHHHHHHTTCHH
T ss_pred CCCEEEEEEECCCCEEEEEEEECCEEEECCEEEECCCCCCCCCCCHHHHHHCCCCEEECHHHHHHHCCCCHHHHHCCCHH
T ss_conf 99607999965585004899979977679978754778808847999999728988833188887587617877426513
Q ss_pred HHCCCCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCCCEEEECHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHH
Q ss_conf 11015772241145432101221022333310210144541587129999999873289779960121332211589999
Q gi|254780178|r 82 KFIRWFKPILTDSGGFQVMSLSKLCSIDEQGVRFRSHIDGSLYRVSPEESVHIQNLLGSDIQMQLDECLALPAEDKELKR 161 (378)
Q Consensus 82 ~fl~~~~~ilTDSGgfQv~sl~~~~~~~~~Gv~f~s~~dG~~~~ltpe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~ 161 (378)
+||+|++++||||||||++|++++.+++++||+|+|++||+++.+|||++|++|+.|||||+|+||+|++++++++++++
T Consensus 81 ~f~~~~~~iltdsGg~q~~sl~~~~~~~~~gv~f~s~~~g~~~~ltpe~~i~~q~~ig~DI~~~Ldd~~~~~~~~~~~~~ 160 (372)
T d1r5ya_ 81 SFMGWDRPILTDSGGYQVMSLSSLTKQSEEGVTFKSHLDGSRHMLSPERSIEIQHLLGSDIVMAFDECTPYPATPSRAAS 160 (372)
T ss_dssp HHHTCCSCEEEECSHHHHC-CC-CCEEETTEEEC---------CBCHHHHHHHHHHHTCSEEECCCCCCCSSCCHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH
T ss_conf 34204565200247654323223455577885353226872111000779999985088467522446653101678899
Q ss_pred HHHHHHHHHHHHHHHHCCC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 9998899999998851358----886055402344436689999887642223467664135675167899899989850
Q gi|254780178|r 162 AMELSLRWAERSLVAFGNQ----PGKALFGIVQGGDNINLRSFSAERLKELDLKGYAIGGLAVGEPQEVMLHILSNVLPI 237 (378)
Q Consensus 162 sv~rT~~w~~~~~~~~~~~----~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~G~aIgGl~~ge~~~~~~~ii~~~~~~ 237 (378)
+++||++|+++|++++... .+|.+|||||||.++|||++|++++.+++|+||+|||++++++++++.++++.+.+.
T Consensus 161 ~~~rt~~w~~~~~~~~~~~~~~~~~~~lfgivqGg~~~dlR~~s~~~l~~~~~~G~aiGgl~~~~~~~~~~~~v~~~~~~ 240 (372)
T d1r5ya_ 161 SMERSMRWAKRSRDAFDSRKEQAENAALFGIQQGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDEMFRVLDFSVPM 240 (372)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHCEEEEEECCTTCHHHHHHHHHHHHHHCCSEEEECSCSSSSCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 99999999999999875055667666321131541265688889999986213732122445675067788899850200
Q ss_pred CCHHHHEECCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHH
Q ss_conf 77033100254101899999985389836620000023320024562100210123223688559866981336889899
Q gi|254780178|r 238 LPVERPHYLMGVGTPDDILKSVSYGVDMFDCVMPTRAGRHGLAFTRFGKINLRNARHIDDMRPLDAESHCSALRDYSRAY 317 (378)
Q Consensus 238 LP~~kPr~l~G~G~P~~i~~~v~~GvDlFD~~~ptr~Ar~G~~~t~~g~i~l~~~~~~~d~~pi~~~C~C~~C~~ytraY 317 (378)
||++|||||||+|+|++|+.+|++|||||||++|+|+||+|+|||++|.+||++++|++|++||+++|+||+|++|||||
T Consensus 241 Lp~~kPr~l~Gvg~P~~il~~V~~GvD~FD~~~p~r~Ar~G~alt~~g~~~l~~~~~~~d~~Pl~~~C~C~~C~~~sraY 320 (372)
T d1r5ya_ 241 LPDDKPHYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTWDGPINIRNARFSEDLKPLDSECHCAVCQKWSRAY 320 (372)
T ss_dssp SCTTSCEEETTCCSHHHHHHHHTTTCCEEECSHHHHHHHTTEECCTTCCEETTSGGGTTCCSCSSSSCCSHHHHHCCHHH
T ss_pred CCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCHHH
T ss_conf 12011022047898789888360589954543113111136157259832321232335689869898992325159999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 9886857850899999999999999999999999985998999999999853
Q gi|254780178|r 318 LHHLLRVNESLAGMILSWANLAYYQDLMKEIRSAIAEDCFVDFAMQTQENWK 369 (378)
Q Consensus 318 l~HL~~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~~~~~~~ 369 (378)
||||++++||+|++||++|||++|.+||++||+||++|+|++|+++|+++|+
T Consensus 321 l~HL~~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~f~~~y~ 372 (372)
T d1r5ya_ 321 IHHLIRAGEILGAMLMTEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYF 372 (372)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHC
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 9877638836899999999999999999999999985999999999999649
No 2
>d1iq8a1 c.1.20.1 (A:6-360) Archaeosine tRNA-guanine transglycosylase, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=100.00 E-value=0 Score=755.05 Aligned_cols=329 Identities=24% Similarity=0.348 Sum_probs=309.3
Q ss_pred CCCEEEEEEECCCCEEEEEEECCEEEECCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHCCCCHH
Q ss_conf 87049999764993279998788754058574106868568868899986099899932266573876899865274201
Q gi|254780178|r 3 KNFHFNLKAVSGSARLGEIITPRGVIKTPAFMPVGTAGTVKAMYFDQVRDLGADVILGNAYHLMLRPGAERIARLGGLHK 82 (378)
Q Consensus 3 ~~~~F~i~~~~~~aR~G~L~t~~g~i~TP~flpv~t~g~v~~lt~~~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gGlh~ 82 (378)
+||+|+|+++|++||+|+|.|+||+|+||+||||+|+|+| +++|++|+++|+|++|+|||||+++|+.+.++..||||+
T Consensus 1 ~m~~F~i~~~d~~AR~G~l~~~~g~i~TP~fmpv~t~~~v-~~~p~~l~~~g~~iil~NtYhl~~~p~~~~~~~~gGLh~ 79 (355)
T d1iq8a1 1 KMLKFEIKARDGAGRIGKLEVNGKKIETPAIMPVVNPKQM-VVEPKELEKMGFEIIITNSYIIYKDEELRRKALELGIHR 79 (355)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTEEEEESEEEEBCCSSSC-SSCHHHHHHTTCCEEEEEHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEECCCCEEEEEECCEEEECCCEEEEECCCCC-CCCHHHHHHHCCCEEECCCCCCCCCCCCEEEECCCCHHH
T ss_conf 9568999861177224899969966608915565458740-148999998389989211130678987344312477044
Q ss_pred HCCCCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCCCEEEECHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHH
Q ss_conf 10157722411454321012210223333102101445415871299999998732897799601213322115899999
Q gi|254780178|r 83 FIRWFKPILTDSGGFQVMSLSKLCSIDEQGVRFRSHIDGSLYRVSPEESVHIQNLLGSDIQMQLDECLALPAEDKELKRA 162 (378)
Q Consensus 83 fl~~~~~ilTDSGgfQv~sl~~~~~~~~~Gv~f~s~~dG~~~~ltpe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~s 162 (378)
||+|++||||||||||++|+++. .++||++|++|+.+||||+|+||+|+++++++++++++
T Consensus 80 F~~w~~~ilTDSGgfQv~sl~~~-------------------~~~~e~~i~~q~~lgsDI~m~lD~~~~~~~~~~~~~~s 140 (355)
T d1iq8a1 80 MLDYNGIIEVDSGSFQLMKYGSI-------------------EVSNREIIEFQHRIGVDIGTFLDIPTPPDAPREQAVKE 140 (355)
T ss_dssp HHTCCSEEEEECSTTHHHHSSCC-------------------SSCHHHHHHHHHHTTCSBBCCCCCCCCTTCCHHHHHHH
T ss_pred HHCCCCCEECCCCCCEEECCCHH-------------------HHHHHHHHEECCCCCCEEEEEECCCCCCCCCHHHHHHH
T ss_conf 30278962305566312112001-------------------12445662012045761798403467877779999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH---HHHHHHHHCCC
Q ss_conf 998899999998851358886055402344436689999887642223467664135675167899---89998985077
Q gi|254780178|r 163 MELSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKELDLKGYAIGGLAVGEPQEVML---HILSNVLPILP 239 (378)
Q Consensus 163 v~rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~G~aIgGl~~ge~~~~~~---~ii~~~~~~LP 239 (378)
++||.+|+++|... ..+.+|||||||.++|||++|++++.+++|+||+|||++.+++.+++. +++..+.+.||
T Consensus 141 ~~rt~~~~~~~~~~----~~~~~~givqGG~~~dLR~~sa~~l~~~~~dG~aiGG~~~~~~~~~~~~~~~~i~~~~~~Lp 216 (355)
T d1iq8a1 141 LEITLSRAREAEEI----KEIPMNATIQGSTYTDLRRYAARRLSSMNFEIHPIGGVVPLLESYRFRDVVDIVISSKMALR 216 (355)
T ss_dssp HHHHHHHHHHHHHH----CCSCBBCCBCCTTCHHHHHHHHHHHHHSCCSBEEECSCHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHH----HHCCCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999988887653----20564200012257317699986654178103201166765204789999998864101486
Q ss_pred HHHHEECCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHH
Q ss_conf 03310025410189999998538983662000002332002456210021012322368855986698133688989998
Q gi|254780178|r 240 VERPHYLMGVGTPDDILKSVSYGVDMFDCVMPTRAGRHGLAFTRFGKINLRNARHIDDMRPLDAESHCSALRDYSRAYLH 319 (378)
Q Consensus 240 ~~kPr~l~G~G~P~~i~~~v~~GvDlFD~~~ptr~Ar~G~~~t~~g~i~l~~~~~~~d~~pi~~~C~C~~C~~ytraYl~ 319 (378)
++|||||||+|+|.+|+.+|++|||||||++|+|+||+|+++|++|.+++++..|. +|+||+|++|||||||
T Consensus 217 ~~kPrylmGvG~P~di~~~v~~GiD~FD~~~p~r~ar~g~~~t~~g~~~l~~~d~~--------pC~C~~C~~~srayl~ 288 (355)
T d1iq8a1 217 PDRPVHLFGAGHPIVFALAVAMGVDLFDSASYALYAKDDRYMTPEGTKRLDELDYF--------PCSCPVCSKYTPQELR 288 (355)
T ss_dssp TTSCEEETTCCCGGGHHHHHHTTCCEEEESHHHHHHHTTEEEETTEEEEGGGCSSC--------CCCSTTTTTCCHHHHT
T ss_pred CCCCEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCC--------CCCCCCCCCCCHHHHH
T ss_conf 33644413788756799999855896520588887640332157885235411013--------4578521405899999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 86857850899999999999999999999999985998999999999
Q gi|254780178|r 320 HLLRVNESLAGMILSWANLAYYQDLMKEIRSAIAEDCFVDFAMQTQE 366 (378)
Q Consensus 320 HL~~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~~~~ 366 (378)
||++++|+ +||++|||++|.+||++||+||++|+|++|++++..
T Consensus 289 HL~~~~e~---~LltiHNl~~~~~l~~~iR~aI~~g~f~~~~e~~~~ 332 (355)
T d1iq8a1 289 EMPKEERT---RLLALHNLWVIKEEIKRVKQAIKEGELWRLVDERAR 332 (355)
T ss_dssp TSCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHCCHH---HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 76346488---999999999999999999999985999999999998
No 3
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]}
Probab=89.37 E-value=0.34 Score=25.07 Aligned_cols=22 Identities=18% Similarity=0.191 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHCCCCEEEECCE
Q ss_conf 0189999998538983662000
Q gi|254780178|r 250 GTPDDILKSVSYGVDMFDCVMP 271 (378)
Q Consensus 250 G~P~~i~~~v~~GvDlFD~~~p 271 (378)
|.-..++....+|.|-|-|...
T Consensus 188 G~~~~~~~~~~~G~~G~~~~~~ 209 (292)
T d1xkya1 188 GDDGLTLPAMAVGAKGIVSVAS 209 (292)
T ss_dssp SSGGGHHHHHHTTCCEEEESTH
T ss_pred CCCCCCCHHHHCCCCCCCCCHH
T ss_conf 9765643298759974005514
No 4
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=86.44 E-value=0.72 Score=22.92 Aligned_cols=18 Identities=6% Similarity=-0.110 Sum_probs=11.7
Q ss_pred HHHHHHHHHCCCCEEEEE
Q ss_conf 999999873289779960
Q gi|254780178|r 129 EESVHIQNLLGSDIQMQL 146 (378)
Q Consensus 129 e~~i~~q~~lg~DI~~~L 146 (378)
.+..+..+.+|.|.++..
T Consensus 92 i~~a~~a~~~Gad~v~i~ 109 (296)
T d1xxxa1 92 IRLAKACAAEGAHGLLVV 109 (296)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHCCCEEEEE
T ss_conf 999888787337849997
No 5
>d1rqba2 c.1.10.5 (A:4-306) Transcarboxylase 5S subunit, N-terminal domain {Propionibacterium freudenreichii shermanii [TaxId: 1752]}
Probab=86.33 E-value=0.97 Score=22.04 Aligned_cols=88 Identities=15% Similarity=0.123 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHEECCCC----HHHHHHHHHHHCCCCEEEE
Q ss_conf 436689999887642223467664135675167899899989850770331002541----0189999998538983662
Q gi|254780178|r 193 DNINLRSFSAERLKELDLKGYAIGGLAVGEPQEVMLHILSNVLPILPVERPHYLMGV----GTPDDILKSVSYGVDMFDC 268 (378)
Q Consensus 193 ~~~dLR~~Sa~~l~~~~~~G~aIgGl~~ge~~~~~~~ii~~~~~~LP~~kPr~l~G~----G~P~~i~~~v~~GvDlFD~ 268 (378)
..++.-...++.+.+.+.+.+.|.--.....-+++.+++..+...++++-|..+++- --....+.|+..|++.||+
T Consensus 158 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~li~~l~~~~~~~i~i~~H~Hnd~Gla~AN~laA~~aG~~~id~ 237 (303)
T d1rqba2 158 HTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDT 237 (303)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 88999999999998439857760476300346799999999986437742314214763788999999999829988988
Q ss_pred CCEEECCCCCCC
Q ss_conf 000002332002
Q gi|254780178|r 269 VMPTRAGRHGLA 280 (378)
Q Consensus 269 ~~ptr~Ar~G~~ 280 (378)
+..=.-.|-|.+
T Consensus 238 ti~GlG~~~GN~ 249 (303)
T d1rqba2 238 AISSMSLGPGHN 249 (303)
T ss_dssp BCGGGCSTTSBC
T ss_pred CCCCCCCCCCCC
T ss_conf 770699998885
No 6
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]}
Probab=85.60 E-value=0.79 Score=22.64 Aligned_cols=18 Identities=11% Similarity=0.069 Sum_probs=12.2
Q ss_pred HHHHHHHHHCCCCEEEEE
Q ss_conf 999999873289779960
Q gi|254780178|r 129 EESVHIQNLLGSDIQMQL 146 (378)
Q Consensus 129 e~~i~~q~~lg~DI~~~L 146 (378)
-+..+..+.+|.|.++.+
T Consensus 87 i~~a~~a~~~Gad~~~v~ 104 (295)
T d1hl2a_ 87 QQLAASAKRYGFDAVSAV 104 (295)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHCCCCEEEEE
T ss_conf 898877986397322221
No 7
>d1nvma2 c.1.10.5 (A:2-290) 4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain {Pseudomonas sp. [TaxId: 306]}
Probab=84.68 E-value=1.2 Score=21.53 Aligned_cols=136 Identities=9% Similarity=0.034 Sum_probs=81.2
Q ss_pred HHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99987328977996012133221158999999988999999988513588860554023444366899998876422234
Q gi|254780178|r 132 VHIQNLLGSDIQMQLDECLALPAEDKELKRAMELSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKELDLK 211 (378)
Q Consensus 132 i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~sv~rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~ 211 (378)
+......+.|++..++.........+..+ +++ +. .-....+...-+....+.-...++.+.+.+++
T Consensus 98 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~--------~a~---~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 163 (289)
T d1nvma2 98 LKNAYQAGARVVRVATHCTEADVSKQHIE--------YAR---NL---GMDTVGFLMMSHMIPAEKLAEQGKLMESYGAT 163 (289)
T ss_dssp HHHHHHHTCCEEEEEEETTCGGGGHHHHH--------HHH---HH---TCEEEEEEESTTSSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCCEEEEEEHHHHHHHHHHHH--------HHH---HH---CCCEEEEEEECCCCCCHHHHHHHHHHCCCCCE
T ss_conf 99999704561688732103366767899--------999---70---77324676402356711446788764022110
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHEECC-----CCHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCC
Q ss_conf 676641356751678998999898507703310025-----41018999999853898366200000233200245
Q gi|254780178|r 212 GYAIGGLAVGEPQEVMLHILSNVLPILPVERPHYLM-----GVGTPDDILKSVSYGVDMFDCVMPTRAGRHGLAFT 282 (378)
Q Consensus 212 G~aIgGl~~ge~~~~~~~ii~~~~~~LP~~kPr~l~-----G~G~P~~i~~~v~~GvDlFD~~~ptr~Ar~G~~~t 282 (378)
.+.|.--.-...-+.+.+++..+...++++.|..++ |. .....+.|++.|+|.||++..-.-.|.|.+-|
T Consensus 164 ~I~l~DT~G~~~P~~v~~~v~~l~~~~~~~~~i~~H~Hn~~g~-a~an~l~A~~~G~~~id~si~GlG~~~GN~~t 238 (289)
T d1nvma2 164 CIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSL-GVANSIVAVEEGCDRVDASLAGMGAGAGNAPL 238 (289)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSC-HHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBH
T ss_pred EEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHHH-HHHHHHHHHHHCCCEEECCCCCCCCCCCCCCH
T ss_conf 3443222100000469999999998703132222430327889-88999999993884761255655887788549
No 8
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=83.03 E-value=1.1 Score=21.69 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=18.2
Q ss_pred HHEECCCCHHHHHHHHHHHCCCCEEEECCE
Q ss_conf 310025410189999998538983662000
Q gi|254780178|r 242 RPHYLMGVGTPDDILKSVSYGVDMFDCVMP 271 (378)
Q Consensus 242 kPr~l~G~G~P~~i~~~v~~GvDlFD~~~p 271 (378)
.+......|....++....+|.|-+-+...
T Consensus 182 ~~~~~v~~g~~~~~~~~~~~Ga~G~i~~~~ 211 (295)
T d1o5ka_ 182 RSDFMVWSGNDDRTFYLLCAGGDGVISVVS 211 (295)
T ss_dssp CTTCEEEESSGGGHHHHHHHTCCEEEESGG
T ss_pred CCCCEECCCCCCCHHHHHHCCCCCCCCCCC
T ss_conf 886223044321012344159985245434
No 9
>d2a6na1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Escherichia coli [TaxId: 562]}
Probab=76.51 E-value=2.2 Score=19.71 Aligned_cols=29 Identities=14% Similarity=0.146 Sum_probs=18.4
Q ss_pred HEECCCCHHHHHHHHHHHCCCCEEEECCE
Q ss_conf 10025410189999998538983662000
Q gi|254780178|r 243 PHYLMGVGTPDDILKSVSYGVDMFDCVMP 271 (378)
Q Consensus 243 Pr~l~G~G~P~~i~~~v~~GvDlFD~~~p 271 (378)
+++....|....++....+|.|-+-+...
T Consensus 179 ~~~~~~~g~~~~~~~~~~~G~~G~i~~~~ 207 (292)
T d2a6na1 179 DDFVLLSGDDASALDFMQLGGHGVISVTA 207 (292)
T ss_dssp TTSEEEECCGGGHHHHHHTTCCEEEESGG
T ss_pred CCCEEEECCHHHHHHHHHCCCEEEEEECC
T ss_conf 96079535535410576479459884110
No 10
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]}
Probab=72.74 E-value=2.7 Score=19.09 Aligned_cols=18 Identities=22% Similarity=0.088 Sum_probs=11.2
Q ss_pred HHHHHHHHHCCCCEEEEE
Q ss_conf 999999873289779960
Q gi|254780178|r 129 EESVHIQNLLGSDIQMQL 146 (378)
Q Consensus 129 e~~i~~q~~lg~DI~~~L 146 (378)
.+..+..+.+|.|.++..
T Consensus 89 iela~~a~~~Gad~i~~~ 106 (293)
T d1f74a_ 89 VELGKYATELGYDCLSAV 106 (293)
T ss_dssp HHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHHCCCCEEECC
T ss_conf 999999997699976515
No 11
>d1geqa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=70.37 E-value=3 Score=18.75 Aligned_cols=120 Identities=13% Similarity=0.102 Sum_probs=70.3
Q ss_pred EECHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 71299999998732897799601213322115899999998899999998851358886055402344436689999887
Q gi|254780178|r 125 RVSPEESVHIQNLLGSDIQMQLDECLALPAEDKELKRAMELSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAER 204 (378)
Q Consensus 125 ~ltpe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~sv~rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~ 204 (378)
....+++++--...|.|-....|.++ .. ...|...|.+. . ..--.|..+ .-.+.|.+.+..
T Consensus 94 ~~G~~~f~~~~~~~Gv~GliipDLP~--eE-----------~~~~~~~~~~~-g-l~~I~lvaP----tt~~~ri~~i~~ 154 (248)
T d1geqa_ 94 RAGVRNFLAEAKASGVDGILVVDLPV--FH-----------AKEFTEIAREE-G-IKTVFLAAP----NTPDERLKVIDD 154 (248)
T ss_dssp HHCHHHHHHHHHHHTCCEEEETTCCG--GG-----------HHHHHHHHHHH-T-CEEEEEECT----TCCHHHHHHHHH
T ss_pred CCCHHHHHHHHCCCCEEEEECCCCCH--HH-----------HHHHHHHCCCC-C-CCEEEEECC----CCHHHHHHHHHH
T ss_conf 36777886541016726875367847--78-----------88987650246-8-526888645----341578898885
Q ss_pred HHHHHHHHHHHHCCCC-CC---CHHHHHHHHHHHHHCCCHHHHEEC-CCCHHHHHHHHHHHCCCCEEE
Q ss_conf 6422234676641356-75---167899899989850770331002-541018999999853898366
Q gi|254780178|r 205 LKELDLKGYAIGGLAV-GE---PQEVMLHILSNVLPILPVERPHYL-MGVGTPDDILKSVSYGVDMFD 267 (378)
Q Consensus 205 l~~~~~~G~aIgGl~~-ge---~~~~~~~ii~~~~~~LP~~kPr~l-~G~G~P~~i~~~v~~GvDlFD 267 (378)
.+. +| -|.++-.++ |. ..+...+.+..+.... +.|..+ ||+.+|+++..++..|.|-.-
T Consensus 155 ~s~-gF-iY~vs~~GvTG~~~~~~~~~~~~v~~vk~~t--~~Pv~vGFGI~~~e~v~~~~~~~ADGvI 218 (248)
T d1geqa_ 155 MTT-GF-VYLVSLYGTTGAREEIPKTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLLKEGANGVV 218 (248)
T ss_dssp HCS-SE-EEEECCC-------CCCHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred CCC-CE-EEEEECCCCCCCCHHHHHHHHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHCCCCEEE
T ss_conf 388-72-8998414665420113356778888876503--6414661364999999999865999999
No 12
>d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]}
Probab=69.13 E-value=3.2 Score=18.57 Aligned_cols=109 Identities=13% Similarity=0.085 Sum_probs=57.2
Q ss_pred HHCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 73289779960121332211589999999889999999885135888605540234443668999988764222346766
Q gi|254780178|r 136 NLLGSDIQMQLDECLALPAEDKELKRAMELSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKELDLKGYAI 215 (378)
Q Consensus 136 ~~lg~DI~~~LD~~~~~~~~~k~~~~sv~rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~G~aI 215 (378)
...|.|=.+..|.+.. ....+...|.+. .- .--.|..+ .-.+.|.+.+...+. +| -|.+
T Consensus 114 ~~~GvdG~IipDlp~e-------------E~~~~~~~~~~~-gl-~~I~lvaP----tt~~~Ri~~i~~~a~-gF-vY~v 172 (261)
T d1rd5a_ 114 KEAGVHGLIVPDLPYV-------------AAHSLWSEAKNN-NL-ELVLLTTP----AIPEDRMKEITKASE-GF-VYLV 172 (261)
T ss_dssp HHTTCCEEECTTCBTT-------------THHHHHHHHHHT-TC-EECEEECT----TSCHHHHHHHHHHCC-SC-EEEE
T ss_pred HHCCCEEEEECCCCHH-------------HHHHHHHHHHCC-CC-CEEEEECC----CCCHHHHHHHHHCCC-CH-HHHH
T ss_conf 7559205420576077-------------777888887434-65-36987456----772367888885096-45-3211
Q ss_pred HCCCC-CC---CHHHHHHHHHHHHHCCCHHHHEEC-CCCHHHHHHHHHHHCCCCEEE
Q ss_conf 41356-75---167899899989850770331002-541018999999853898366
Q gi|254780178|r 216 GGLAV-GE---PQEVMLHILSNVLPILPVERPHYL-MGVGTPDDILKSVSYGVDMFD 267 (378)
Q Consensus 216 gGl~~-ge---~~~~~~~ii~~~~~~LP~~kPr~l-~G~G~P~~i~~~v~~GvDlFD 267 (378)
+-.++ |+ ..+...+.+..+... .++|..+ ||+.+|+++-.....|.|-.-
T Consensus 173 s~~GvTG~~~~~~~~~~~~i~~ik~~--t~~Pi~vGFGI~~~e~v~~~~~~gaDGvI 227 (261)
T d1rd5a_ 173 SVNGVTGPRANVNPRVESLIQEVKKV--TNKPVAVGFGISKPEHVKQIAQWGADGVI 227 (261)
T ss_dssp CSSCCBCTTSCBCTHHHHHHHHHHHH--CSSCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCEEEECCCCCHHHHHHHHHCCCCEEE
T ss_conf 11376532222115799999876203--67876998177999999999865999999
No 13
>d1w3ia_ c.1.10.1 (A:) 2-keto-3-deoxy gluconate aldolase Eda {Sulfolobus solfataricus [TaxId: 2287]}
Probab=68.54 E-value=3.3 Score=18.50 Aligned_cols=19 Identities=0% Similarity=-0.227 Sum_probs=13.9
Q ss_pred HHHHHHHHHHCCCCEEEEE
Q ss_conf 9999999873289779960
Q gi|254780178|r 128 PEESVHIQNLLGSDIQMQL 146 (378)
Q Consensus 128 pe~~i~~q~~lg~DI~~~L 146 (378)
..+..+..+.+|.|-++.+
T Consensus 80 ~i~~a~~a~~~Ga~~~~~~ 98 (293)
T d1w3ia_ 80 AIRLAKLSKDFDIVGIASY 98 (293)
T ss_dssp HHHHHHHGGGSCCSEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCC
T ss_conf 6664256654213232223
No 14
>d2btma_ c.1.1.1 (A:) Triosephosphate isomerase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=58.27 E-value=5 Score=17.26 Aligned_cols=75 Identities=9% Similarity=0.147 Sum_probs=29.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCHHHHH
Q ss_conf 3322115899999998899999998851358886055402344436689999887642-223467664135675167899
Q gi|254780178|r 150 LALPAEDKELKRAMELSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKE-LDLKGYAIGGLAVGEPQEVML 228 (378)
Q Consensus 150 ~~~~~~~k~~~~sv~rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~-~~~~G~aIgGl~~ge~~~~~~ 228 (378)
|...++.+.+++...--..++.++........-..|+| |.+.++- ++++.+ .++||+.|||.++ +.+.+.
T Consensus 173 TG~~a~~~~i~e~~~~Ir~~l~~~~~~~~~~~i~ilYG---GSV~~~N----~~~i~~~~~vDG~LVG~ASl--~~~~F~ 243 (251)
T d2btma_ 173 TGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYG---GSVKPDN----IRDFLAQQQIDGALVGGASL--EPASFL 243 (251)
T ss_dssp TSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEE---SSCCTTT----HHHHHTSTTCCEEEESGGGS--SHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEE---CCCCHHH----HHHHHCCCCCCEEEECHHHC--CHHHHH
T ss_conf 56678826666668999999986406334165858850---8979869----99996688999799535767--989999
Q ss_pred HHHHH
Q ss_conf 89998
Q gi|254780178|r 229 HILSN 233 (378)
Q Consensus 229 ~ii~~ 233 (378)
+|+..
T Consensus 244 ~Ii~a 248 (251)
T d2btma_ 244 QLVEA 248 (251)
T ss_dssp HHHHT
T ss_pred HHHHH
T ss_conf 99997
No 15
>d1m6ja_ c.1.1.1 (A:) Triosephosphate isomerase {Entamoeba histolytica [TaxId: 5759]}
Probab=55.93 E-value=4.7 Score=17.46 Aligned_cols=19 Identities=11% Similarity=-0.127 Sum_probs=8.3
Q ss_pred CHHHHHHHHHHCCCCEEEE
Q ss_conf 2999999987328977996
Q gi|254780178|r 127 SPEESVHIQNLLGSDIQMQ 145 (378)
Q Consensus 127 tpe~~i~~q~~lg~DI~~~ 145 (378)
|-|-+....+.+|.+.++.
T Consensus 81 TGeiSa~mLkd~G~~yvii 99 (260)
T d1m6ja_ 81 TGEVHVGMLVDCQVPYVIL 99 (260)
T ss_dssp TTCCBHHHHHHTTCCEEEE
T ss_pred HCCCCHHHHHHHCCCEEEE
T ss_conf 2023589998637530110
No 16
>d1mo0a_ c.1.1.1 (A:) Triosephosphate isomerase {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=53.80 E-value=5.9 Score=16.78 Aligned_cols=42 Identities=24% Similarity=0.628 Sum_probs=22.7
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 6055402344436689999887642-223467664135675167899899989
Q gi|254780178|r 183 KALFGIVQGGDNINLRSFSAERLKE-LDLKGYAIGGLAVGEPQEVMLHILSNV 234 (378)
Q Consensus 183 ~~lfgiVqGG~~~dLR~~Sa~~l~~-~~~~G~aIgGl~~ge~~~~~~~ii~~~ 234 (378)
..|+| |.+.++- ++++.+ -++||+.|||.++. + + +.+|+.+.
T Consensus 212 ~iLYG---GSV~~~N----~~~i~~~~~vDG~LVGgASL~-~-~-F~~Ii~~~ 254 (257)
T d1mo0a_ 212 RIIYG---GSVTADN----AAELGKKPDIDGFLVGGASLK-P-D-FVKIINAR 254 (257)
T ss_dssp CEEEE---SSCCTTT----HHHHTTSTTCCEEEESGGGGS-T-H-HHHHHHHH
T ss_pred CEEEE---CCCCHHH----HHHHHCCCCCCEEEEEHHHCC-H-H-HHHHHHHH
T ss_conf 58862---8859879----999956889886995147578-6-7-99999997
No 17
>d1kv5a_ c.1.1.1 (A:) Triosephosphate isomerase {Trypanosoma brucei [TaxId: 5691]}
Probab=46.90 E-value=6.7 Score=16.40 Aligned_cols=21 Identities=33% Similarity=0.898 Sum_probs=9.5
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 234676641356751678998999
Q gi|254780178|r 209 DLKGYAIGGLAVGEPQEVMLHILS 232 (378)
Q Consensus 209 ~~~G~aIgGl~~ge~~~~~~~ii~ 232 (378)
++||+.|||.++. + + +.+|+.
T Consensus 226 ~vDG~LVGgASl~-~-e-F~~Ii~ 246 (249)
T d1kv5a_ 226 DVNGFLVGGASLK-P-E-FVDIIK 246 (249)
T ss_dssp TCCEEEESGGGGS-T-T-HHHHHH
T ss_pred CCCEEEECHHHCC-H-H-HHHHHH
T ss_conf 9997895227569-8-9-999998
No 18
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=45.78 E-value=6 Score=16.72 Aligned_cols=73 Identities=15% Similarity=0.145 Sum_probs=41.7
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHCC
Q ss_conf 60554023444366899998876422234676641356751678998999898507703310025410189999998538
Q gi|254780178|r 183 KALFGIVQGGDNINLRSFSAERLKELDLKGYAIGGLAVGEPQEVMLHILSNVLPILPVERPHYLMGVGTPDDILKSVSYG 262 (378)
Q Consensus 183 ~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~G~aIgGl~~ge~~~~~~~ii~~~~~~LP~~kPr~l~G~G~P~~i~~~v~~G 262 (378)
..++|+ |... ....++...+.+.+ |. ++.+-+.+ ++..+.. ..--++.|+.+|.++..+.++|
T Consensus 65 ~~~vGa--GTV~---~~~~~~~a~~aGa~-Fi---vSP~~~~~----v~~~a~~----~~i~~iPGv~TpsEi~~A~~~G 127 (212)
T d1vhca_ 65 DFLIAA--GTVL---TAEQVVLAKSSGAD-FV---VTPGLNPK----IVKLCQD----LNFPITPGVNNPMAIEIALEMG 127 (212)
T ss_dssp TCEEEE--ESCC---SHHHHHHHHHHTCS-EE---ECSSCCHH----HHHHHHH----TTCCEECEECSHHHHHHHHHTT
T ss_pred CCEEEE--EECC---CHHHHHHHHHHCCC-EE---ECCCCCHH----HHHHHHH----CCCCCCCCCCCHHHHHHHHHCC
T ss_conf 734766--3146---58999999861786-89---77888799----9999985----5997168868889999999879
Q ss_pred CCEEEECCEEE
Q ss_conf 98366200000
Q gi|254780178|r 263 VDMFDCVMPTR 273 (378)
Q Consensus 263 vDlFD~~~ptr 273 (378)
.|+.- .+|+.
T Consensus 128 ~~~vK-~FPA~ 137 (212)
T d1vhca_ 128 ISAVK-FFPAE 137 (212)
T ss_dssp CCEEE-ETTTT
T ss_pred CCEEE-ECCCC
T ss_conf 99799-75543
No 19
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=43.97 E-value=6.4 Score=16.56 Aligned_cols=46 Identities=24% Similarity=0.462 Sum_probs=30.4
Q ss_pred CCCCCHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHCCCCEEEECCEEE
Q ss_conf 5675167899899989850770331002541018999999853898366200000
Q gi|254780178|r 219 AVGEPQEVMLHILSNVLPILPVERPHYLMGVGTPDDILKSVSYGVDMFDCVMPTR 273 (378)
Q Consensus 219 ~~ge~~~~~~~ii~~~~~~LP~~kPr~l~G~G~P~~i~~~v~~GvDlFD~~~ptr 273 (378)
+.+-+.+ +++.+.. ..--++.|+.+|.++..+.++|.|+.- .+|.-
T Consensus 95 sP~~~~~----v~~~a~~----~~i~~iPGv~TpsEi~~A~~~G~~~vK-lFPA~ 140 (216)
T d1mxsa_ 95 TPGITED----ILEAGVD----SEIPLLPGISTPSEIMMGYALGYRRFK-LFPAE 140 (216)
T ss_dssp CSSCCHH----HHHHHHH----CSSCEECEECSHHHHHHHHTTTCCEEE-ETTHH
T ss_pred CCCCCHH----HHHHHHH----CCCCCCCCCCCHHHHHHHHHCCCCEEE-ECCCC
T ss_conf 8998499----9999986----599864884988999999987999788-51532
No 20
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=43.57 E-value=8.4 Score=15.74 Aligned_cols=41 Identities=17% Similarity=0.374 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHCCCHHHHEECC-CCHHHHHHHHHHHCCCCEEE
Q ss_conf 8998999898507703310025-41018999999853898366
Q gi|254780178|r 226 VMLHILSNVLPILPVERPHYLM-GVGTPDDILKSVSYGVDMFD 267 (378)
Q Consensus 226 ~~~~ii~~~~~~LP~~kPr~l~-G~G~P~~i~~~v~~GvDlFD 267 (378)
.-.+++..+...+| +-|..-. |+.++.|+++.+.+|.|..-
T Consensus 241 ~al~~v~~~~~~~~-~ipIi~~GGI~~~~d~~~~l~aGA~~Vq 282 (312)
T d1gtea2 241 IALRAVTTIARALP-GFPILATGGIDSAESGLQFLHSGASVLQ 282 (312)
T ss_dssp HHHHHHHHHHHHST-TCCEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHCC-CCCEEEECCCCCHHHHHHHHHCCCCEEE
T ss_conf 45999999999748-9839998687999999999983999047
No 21
>d1o5xa_ c.1.1.1 (A:) Triosephosphate isomerase {Plasmodium falciparum [TaxId: 5833]}
Probab=43.05 E-value=5.9 Score=16.79 Aligned_cols=23 Identities=22% Similarity=0.589 Sum_probs=12.2
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 22346766413567516789989998
Q gi|254780178|r 208 LDLKGYAIGGLAVGEPQEVMLHILSN 233 (378)
Q Consensus 208 ~~~~G~aIgGl~~ge~~~~~~~ii~~ 233 (378)
.++||+.|||-++. +.+.+|+..
T Consensus 222 ~~idG~LVG~ASL~---~~F~~Ii~~ 244 (246)
T d1o5xa_ 222 EDIDGFLVGNASLK---ESFVDIIKS 244 (246)
T ss_dssp TTCCEEEECGGGGS---TTHHHHHHH
T ss_pred CCCCEEEEECCCCC---HHHHHHHHH
T ss_conf 89897996232088---899999998
No 22
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}
Probab=42.47 E-value=6.8 Score=16.37 Aligned_cols=46 Identities=17% Similarity=0.418 Sum_probs=30.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHCCCCEEEECCEEE
Q ss_conf 5675167899899989850770331002541018999999853898366200000
Q gi|254780178|r 219 AVGEPQEVMLHILSNVLPILPVERPHYLMGVGTPDDILKSVSYGVDMFDCVMPTR 273 (378)
Q Consensus 219 ~~ge~~~~~~~ii~~~~~~LP~~kPr~l~G~G~P~~i~~~v~~GvDlFD~~~ptr 273 (378)
+.+-+.+ +++.+.. ..--++.|+.+|.++..+.++|.|+.- .+|+.
T Consensus 93 SP~~~~~----v~~~a~~----~~i~~iPGv~TpsEi~~A~~~G~~~vK-lFPA~ 138 (213)
T d1wbha1 93 SPGLTEP----LLKAATE----GTIPLIPGISTVSELMLGMDYGLKEFK-FFPAE 138 (213)
T ss_dssp ESSCCHH----HHHHHHH----SSSCEEEEESSHHHHHHHHHTTCCEEE-ETTTT
T ss_pred CCCCCHH----HHHHHHH----CCCCCCCCCCCHHHHHHHHHCCCCEEE-ECCCH
T ss_conf 8989889----9999985----598755882877999999977999798-53104
No 23
>d1n55a_ c.1.1.1 (A:) Triosephosphate isomerase {Leishmania mexicana [TaxId: 5665]}
Probab=42.33 E-value=6.7 Score=16.42 Aligned_cols=23 Identities=30% Similarity=0.745 Sum_probs=11.5
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 22346766413567516789989998
Q gi|254780178|r 208 LDLKGYAIGGLAVGEPQEVMLHILSN 233 (378)
Q Consensus 208 ~~~~G~aIgGl~~ge~~~~~~~ii~~ 233 (378)
.++||+.|||-++. + + +.+|++.
T Consensus 225 ~~vdG~LVG~ASl~-~-~-F~~Ii~~ 247 (249)
T d1n55a_ 225 PDINGFLVGGASLK-P-E-FRDIIDA 247 (249)
T ss_dssp TTCCEEEESGGGGS-T-T-HHHHHHT
T ss_pred CCCCEEEEEHHHCC-H-H-HHHHHHH
T ss_conf 89896995226558-9-9-9999996
No 24
>d1b9ba_ c.1.1.1 (A:) Triosephosphate isomerase {Thermotoga maritima [TaxId: 2336]}
Probab=41.63 E-value=6.1 Score=16.67 Aligned_cols=24 Identities=21% Similarity=0.443 Sum_probs=13.6
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 223467664135675167899899989
Q gi|254780178|r 208 LDLKGYAIGGLAVGEPQEVMLHILSNV 234 (378)
Q Consensus 208 ~~~~G~aIgGl~~ge~~~~~~~ii~~~ 234 (378)
.++||+.|||-++. +.+.+|+..+
T Consensus 226 ~~vDG~LVGgASL~---~~F~~I~~~~ 249 (252)
T d1b9ba_ 226 KDIDGGLVGGASLK---ESFIELARIM 249 (252)
T ss_dssp TTCCEEEESGGGTS---THHHHHHHHH
T ss_pred CCCCEEEEECHHCC---HHHHHHHHHH
T ss_conf 79997996122088---7899999998
No 25
>d1tx2a_ c.1.21.1 (A:) Dihydropteroate synthetase {Bacillus anthracis [TaxId: 1392]}
Probab=40.63 E-value=9.3 Score=15.45 Aligned_cols=38 Identities=18% Similarity=0.062 Sum_probs=22.8
Q ss_pred ECCCCCCEEEECHHHHHHHHHHC---CCCEEEEEHHHCCCCC
Q ss_conf 01445415871299999998732---8977996012133221
Q gi|254780178|r 116 RSHIDGSLYRVSPEESVHIQNLL---GSDIQMQLDECLALPA 154 (378)
Q Consensus 116 ~s~~dG~~~~ltpe~~i~~q~~l---g~DI~~~LD~~~~~~~ 154 (378)
-|.+||++ +.+++..++-.+.+ |+||+=.=.+-|.+.+
T Consensus 30 DSFsdgg~-~~~~~~a~~~a~~~i~~GAdiIDIGaeSTrPg~ 70 (273)
T d1tx2a_ 30 DSFSDGGS-YNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGF 70 (273)
T ss_dssp CTTCSSCB-HHHHHHHHHHHHHHHHTTCSEEEEESCC----C
T ss_pred CCCCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEECEECCCCC
T ss_conf 99999976-889999999999999879988995161335655
No 26
>d1neya_ c.1.1.1 (A:) Triosephosphate isomerase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.38 E-value=7 Score=16.27 Aligned_cols=74 Identities=22% Similarity=0.397 Sum_probs=34.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCHHHHH
Q ss_conf 33221158999999988999999988513588860554023444366899998876422-23467664135675167899
Q gi|254780178|r 150 LALPAEDKELKRAMELSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKEL-DLKGYAIGGLAVGEPQEVML 228 (378)
Q Consensus 150 ~~~~~~~k~~~~sv~rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~-~~~G~aIgGl~~ge~~~~~~ 228 (378)
|...++.+.+++...--..++.+.........-..|+| |.+.++ .++++.+. ++||+.|||-++. + + +.
T Consensus 171 tG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~i~iLYG---GSV~~~----N~~~i~~~~~iDG~LVGgASL~-~-e-F~ 240 (247)
T d1neya_ 171 TGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYG---GSANGS----NAVTFKDKADVDGFLVGGASLK-P-E-FV 240 (247)
T ss_dssp TSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEE---SSCCTT----TGGGGTTCTTCCEEEESGGGGS-T-H-HH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE---CCCCHH----HHHHHHCCCCCCEEEEEHHHCC-H-H-HH
T ss_conf 77666726665456788889987632311466748980---788888----9999966889886995237588-6-8-99
Q ss_pred HHHHH
Q ss_conf 89998
Q gi|254780178|r 229 HILSN 233 (378)
Q Consensus 229 ~ii~~ 233 (378)
+|+..
T Consensus 241 ~Ii~~ 245 (247)
T d1neya_ 241 DIINS 245 (247)
T ss_dssp HHHTT
T ss_pred HHHHC
T ss_conf 99862
No 27
>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]}
Probab=38.43 E-value=10 Score=15.22 Aligned_cols=185 Identities=18% Similarity=0.195 Sum_probs=86.7
Q ss_pred EEECCEEEECCCEEECCCCCCCC-CCCHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHCCCCHHHCCCCCC-E-EECCCCC
Q ss_conf 98788754058574106868568-8688999860998999322665738768998652742011015772-2-4114543
Q gi|254780178|r 21 IITPRGVIKTPAFMPVGTAGTVK-AMYFDQVRDLGADVILGNAYHLMLRPGAERIARLGGLHKFIRWFKP-I-LTDSGGF 97 (378)
Q Consensus 21 L~t~~g~i~TP~flpv~t~g~v~-~lt~~~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gGlh~fl~~~~~-i-lTDSGgf 97 (378)
|..+...+.-- +.++|..-.. .+..+-++..|++++-.. ..|-.... .....+-.++.|.+. + -..+|.
T Consensus 3 L~I~g~~f~SR--LilGTgkY~s~~~~~~ai~aSgaeiVTVA----lRR~~~~~-~~~~~~l~~i~~~~~~lLPNTAGc- 74 (251)
T d1xm3a_ 3 LTIGGKSFQSR--LLLGTGKYPSFDIQKEAVAVSESDILTFA----VRRMNIFE-ASQPNFLEQLDLSKYTLLPNTAGA- 74 (251)
T ss_dssp EEETTEEESCC--EEEECSCSSCHHHHHHHHHHHTCSEEEEE----TTSSTTC--------CTTCCGGGSEEEEECTTC-
T ss_pred EEECCEEEECC--EEEECCCCCCHHHHHHHHHHHCCCEEEEE----EEEECCCC-CCCCCHHHHCCCCCEEECCCHHHH-
T ss_conf 59999998853--58874899999999999998699879999----86313767-888641443155545972542987-
Q ss_pred CCCHHHHCCCCCCCCEEEECCCCCCEEEECHHHHHHH----HHHCCCCEEE---EEHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 2101221022333310210144541587129999999----8732897799---60121332211589999999889999
Q gi|254780178|r 98 QVMSLSKLCSIDEQGVRFRSHIDGSLYRVSPEESVHI----QNLLGSDIQM---QLDECLALPAEDKELKRAMELSLRWA 170 (378)
Q Consensus 98 Qv~sl~~~~~~~~~Gv~f~s~~dG~~~~ltpe~~i~~----q~~lg~DI~~---~LD~~~~~~~~~k~~~~sv~rT~~w~ 170 (378)
.|.++.++. .+.++.|++= .-|+-+-++++.+ |.+-+
T Consensus 75 ----------------------------~tA~EAvr~A~lARE~~~t~~IKLEVi~D~~~L~PD~~e--------tl~Aa 118 (251)
T d1xm3a_ 75 ----------------------------STAEEAVRIARLAKASGLCDMIKVEVIGCSRSLLPDPVE--------TLKAS 118 (251)
T ss_dssp ----------------------------SSHHHHHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHHH--------HHHHH
T ss_pred ----------------------------HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHH--------HHHHH
T ss_conf ----------------------------509999999999998158966899973488776888779--------99999
Q ss_pred HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH-----HHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHEE
Q ss_conf 99988513588860554023444366899998876422234-----6766413567516789989998985077033100
Q gi|254780178|r 171 ERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKELDLK-----GYAIGGLAVGEPQEVMLHILSNVLPILPVERPHY 245 (378)
Q Consensus 171 ~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~-----G~aIgGl~~ge~~~~~~~ii~~~~~~LP~~kPr~ 245 (378)
+...+ ++=..|+-+ ..|+.. ++.+.+.+.. |=.||+ ..|-......+++- +. .+-|..
T Consensus 119 e~Lv~-----eGF~VlpY~----~~D~v~--ak~Le~~Gc~avMPlgsPIGS-g~Gl~n~~~l~~i~---~~--~~vPvI 181 (251)
T d1xm3a_ 119 EQLLE-----EGFIVLPYT----SDDVVL--ARKLEELGVHAIMPGASPIGS-GQGILNPLNLSFII---EQ--AKVPVI 181 (251)
T ss_dssp HHHHH-----TTCCEEEEE----CSCHHH--HHHHHHHTCSCBEECSSSTTC-CCCCSCHHHHHHHH---HH--CSSCBE
T ss_pred HHHHH-----CCCEEEEEC----CCCHHH--HHHHHHCCCHHHHHHHHHHHC-CCCCCCHHHHHHHH---HC--CCCCEE
T ss_conf 99986-----896799961----789899--999987487138876645414-88757867999998---61--896689
Q ss_pred C-CCCHHHHHHHHHHHCCCCEE
Q ss_conf 2-54101899999985389836
Q gi|254780178|r 246 L-MGVGTPDDILKSVSYGVDMF 266 (378)
Q Consensus 246 l-~G~G~P~~i~~~v~~GvDlF 266 (378)
+ -|+|.|-+...+.++|+|-.
T Consensus 182 vDAGIG~pSdAa~AMElG~daV 203 (251)
T d1xm3a_ 182 VDAGIGSPKDAAYAMELGADGV 203 (251)
T ss_dssp EESCCCSHHHHHHHHHTTCSEE
T ss_pred EECCCCCHHHHHHHHHCCCCEE
T ss_conf 7358898899999997039999
No 28
>d1r2ra_ c.1.1.1 (A:) Triosephosphate isomerase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=38.34 E-value=9.6 Score=15.37 Aligned_cols=24 Identities=29% Similarity=0.786 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 422234676641356751678998999
Q gi|254780178|r 206 KELDLKGYAIGGLAVGEPQEVMLHILS 232 (378)
Q Consensus 206 ~~~~~~G~aIgGl~~ge~~~~~~~ii~ 232 (378)
..-++||+.|||-++. + + +.+|+.
T Consensus 220 ~~~~vDG~LVGgASL~-~-e-F~~Ii~ 243 (246)
T d1r2ra_ 220 SQPDVDGFLVGGASLK-P-E-FVDIIN 243 (246)
T ss_dssp TSTTCCEEEESGGGGS-T-H-HHHHHT
T ss_pred CCCCCCEEEEEHHHCC-H-H-HHHHHH
T ss_conf 6889896885026488-7-9-999997
No 29
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=38.22 E-value=10 Score=15.20 Aligned_cols=21 Identities=10% Similarity=-0.091 Sum_probs=18.7
Q ss_pred EECHHHHHHHHHHCCCCEEEE
Q ss_conf 712999999987328977996
Q gi|254780178|r 125 RVSPEESVHIQNLLGSDIQMQ 145 (378)
Q Consensus 125 ~ltpe~~i~~q~~lg~DI~~~ 145 (378)
..+++++++....-+||++..
T Consensus 40 ~~p~e~iv~a~~~~~~d~v~l 60 (137)
T d1ccwa_ 40 LSPQELFIKAAIETKADAILV 60 (137)
T ss_dssp EECHHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHHCCCCEEEE
T ss_conf 569999999998439877887
No 30
>d1wv2a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Pseudomonas aeruginosa [TaxId: 287]}
Probab=37.92 E-value=7.1 Score=16.25 Aligned_cols=185 Identities=18% Similarity=0.156 Sum_probs=83.1
Q ss_pred EECCEEEECCCEEECCCCCC-CCCCCHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHCCCCHHHCCCCCCEE--ECCCCCC
Q ss_conf 87887540585741068685-68868899986099899932266573876899865274201101577224--1145432
Q gi|254780178|r 22 ITPRGVIKTPAFMPVGTAGT-VKAMYFDQVRDLGADVILGNAYHLMLRPGAERIARLGGLHKFIRWFKPIL--TDSGGFQ 98 (378)
Q Consensus 22 ~t~~g~i~TP~flpv~t~g~-v~~lt~~~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gGlh~fl~~~~~il--TDSGgfQ 98 (378)
...+.++.-- +.++|..- -+.+..+-++..|++++-.- ..|...........+-.|+.|.+..+ ..+|
T Consensus 4 ~I~~~~f~SR--LilGTGky~s~~~~~~ai~aSgaeiVTVA----vRR~~~~~~~~~~~l~~~i~~~~~~~LPNTAG--- 74 (243)
T d1wv2a_ 4 VIAGRTYGSR--LLVGTGKYKDLDETRRAIEASGAEIVTVA----VRRTNIGQNPDEPNLLDVIPPDRYTILPNTAG--- 74 (243)
T ss_dssp EETTEEESCC--EEECCSCSSSHHHHHHHHHHSCCSEEEEE----GGGCCC-------------CTTTSEEEEECTT---
T ss_pred EECCEEEECC--EEEECCCCCCHHHHHHHHHHHCCCEEEEE----CCCCCCCCCCCCCHHHHHCCCCCEEECCCCCC---
T ss_conf 9998988811--57871789999999999998699789997----13516677765401777602357033365202---
Q ss_pred CCHHHHCCCCCCCCEEEECCCCCCEEEECHHHHHHHHH---H-CCCCEEEEEHH----HCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 10122102233331021014454158712999999987---3-28977996012----1332211589999999889999
Q gi|254780178|r 99 VMSLSKLCSIDEQGVRFRSHIDGSLYRVSPEESVHIQN---L-LGSDIQMQLDE----CLALPAEDKELKRAMELSLRWA 170 (378)
Q Consensus 99 v~sl~~~~~~~~~Gv~f~s~~dG~~~~ltpe~~i~~q~---~-lg~DI~~~LD~----~~~~~~~~k~~~~sv~rT~~w~ 170 (378)
-.|+|+.++.-+ . ++.+..+-|.. .+-.++..+ |..=+
T Consensus 75 --------------------------c~taeeAv~~A~larE~~~~~~~iKLEVi~d~~~L~Pd~~e--------tl~Aa 120 (243)
T d1wv2a_ 75 --------------------------CYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVE--------TLKAA 120 (243)
T ss_dssp --------------------------CCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHH--------HHHHH
T ss_pred --------------------------CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHH--------HHHHH
T ss_conf --------------------------31599999999999997079825787651564344885888--------89988
Q ss_pred HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-----HHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHEE
Q ss_conf 9998851358886055402344436689999887642223-----46766413567516789989998985077033100
Q gi|254780178|r 171 ERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKELDL-----KGYAIGGLAVGEPQEVMLHILSNVLPILPVERPHY 245 (378)
Q Consensus 171 ~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~-----~G~aIgGl~~ge~~~~~~~ii~~~~~~LP~~kPr~ 245 (378)
+.- . .++=..++-+ ..|+.. ++.+.+.+. -|=.||+ ..|.......+++. ... +-|..
T Consensus 121 ~~L----v-~egF~Vlpy~----~~D~v~--ak~le~~Gc~~vMplgsPIGs-g~Gi~n~~~l~~i~---~~~--~vpvi 183 (243)
T d1wv2a_ 121 EQL----V-KDGFDVMVYT----SDDPII--ARQLAEIGCIAVMPLAGLIGS-GLGICNPYNLRIIL---EEA--KVPVL 183 (243)
T ss_dssp HHH----H-TTTCEEEEEE----CSCHHH--HHHHHHSCCSEEEECSSSTTC-CCCCSCHHHHHHHH---HHC--SSCBE
T ss_pred HHH----H-CCCEEEEECC----CCCHHH--HHHHHHCCCEEEEECCCCCCC-CCCCCCHHHHHHCC---CCC--CCCEE
T ss_conf 876----1-3766787506----878898--767887175046632652224-63203678887600---157--83368
Q ss_pred C-CCCHHHHHHHHHHHCCCCEE
Q ss_conf 2-54101899999985389836
Q gi|254780178|r 246 L-MGVGTPDDILKSVSYGVDMF 266 (378)
Q Consensus 246 l-~G~G~P~~i~~~v~~GvDlF 266 (378)
+ -|+|+|.|...+.++|.|-.
T Consensus 184 vdAGIg~psdaa~AMElG~dgV 205 (243)
T d1wv2a_ 184 VDAGVGTASDAAIAMELGCEAV 205 (243)
T ss_dssp EESCCCSHHHHHHHHHHTCSEE
T ss_pred EECCCCCHHHHHHHHHCCCCEE
T ss_conf 5246687777999997459899
No 31
>d1trea_ c.1.1.1 (A:) Triosephosphate isomerase {Escherichia coli [TaxId: 562]}
Probab=37.29 E-value=10 Score=15.11 Aligned_cols=76 Identities=14% Similarity=0.204 Sum_probs=34.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 33221158999999988999999988513588860554023444366899998876422234676641356751678998
Q gi|254780178|r 150 LALPAEDKELKRAMELSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKELDLKGYAIGGLAVGEPQEVMLH 229 (378)
Q Consensus 150 ~~~~~~~k~~~~sv~rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~G~aIgGl~~ge~~~~~~~ 229 (378)
|...++.+.+++....-..++.+..... ..+-..|+| |++.++- +.+.+...++||+.|||-++ +.+.+.+
T Consensus 174 tG~~a~~~~~~~~~~~ir~~l~~~~~~~-~~~v~iLYG---GSV~~~N---~~~i~~~~~vdG~LVGgASl--~~~~F~~ 244 (255)
T d1trea_ 174 TGKSATPAQAQAVHKFIRDHIAKVDANI-AEQVIIQYG---GSVNASN---AAELFAQPDIDGALVGGASL--KADAFAV 244 (255)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHCEEEEC---SCCCTTT---HHHHHTSTTCCEEEESGGGG--CHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCHHH-CCCCCEEEC---CCCCHHH---HHHHHCCCCCCEEEECHHHC--CHHHHHH
T ss_conf 5546674102456788888886403222-377518861---7868738---99996688998799535546--8899999
Q ss_pred HHHHH
Q ss_conf 99989
Q gi|254780178|r 230 ILSNV 234 (378)
Q Consensus 230 ii~~~ 234 (378)
|++.+
T Consensus 245 Ii~~~ 249 (255)
T d1trea_ 245 IVKAA 249 (255)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 32
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]}
Probab=36.34 E-value=11 Score=15.01 Aligned_cols=46 Identities=22% Similarity=0.371 Sum_probs=31.4
Q ss_pred CCCCCHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHCCCCEEEECCEEE
Q ss_conf 5675167899899989850770331002541018999999853898366200000
Q gi|254780178|r 219 AVGEPQEVMLHILSNVLPILPVERPHYLMGVGTPDDILKSVSYGVDMFDCVMPTR 273 (378)
Q Consensus 219 ~~ge~~~~~~~ii~~~~~~LP~~kPr~l~G~G~P~~i~~~v~~GvDlFD~~~ptr 273 (378)
+.+-+.+ +++.+. ...--++.|+.+|.++..+.++|.|..- .+|..
T Consensus 88 sP~~~~~----v~~~~~----~~~i~~iPGv~TpsEi~~A~~~G~~~lK-~fPa~ 133 (202)
T d1wa3a1 88 SPHLDEE----ISQFCK----EKGVFYMPGVMTPTELVKAMKLGHTILK-LFPGE 133 (202)
T ss_dssp CSSCCHH----HHHHHH----HHTCEEECEECSHHHHHHHHHTTCCEEE-ETTHH
T ss_pred CCCCCHH----HHHHHH----HCCCCEECCCCCHHHHHHHHHCCCCEEE-ECCHH
T ss_conf 7877399----999998----6599561781868899999977999897-54332
No 33
>d1sr9a2 c.1.10.5 (A:61-370) 2-isopropylmalate synthase LeuA, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=35.76 E-value=11 Score=14.95 Aligned_cols=102 Identities=12% Similarity=0.018 Sum_probs=56.5
Q ss_pred ECCCCCCHHHHHHHHHHHHHH------HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHH--HHEECC-----CCHHHHH
Q ss_conf 023444366899998876422------234676641356751678998999898507703--310025-----4101899
Q gi|254780178|r 188 IVQGGDNINLRSFSAERLKEL------DLKGYAIGGLAVGEPQEVMLHILSNVLPILPVE--RPHYLM-----GVGTPDD 254 (378)
Q Consensus 188 iVqGG~~~dLR~~Sa~~l~~~------~~~G~aIgGl~~ge~~~~~~~ii~~~~~~LP~~--kPr~l~-----G~G~P~~ 254 (378)
...++...+.-...++...+. +++.+.|..-.....-++..+++......+|.. -|..++ |. -...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~Dt~G~~~P~~v~~~v~~~~~~~~~~~~i~i~~H~Hn~~Gl-a~AN 236 (310)
T d1sr9a2 158 ESYTGTELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGT-AVAA 236 (310)
T ss_dssp ETGGGSCHHHHHHHHHHHHHHHCCBTTBCEEEEEEESSCCSCHHHHHHHHHHHHHHSSSGGGEEEEEEEBCTTSC-HHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHH-HHHH
T ss_conf 337777689888899999998326644965885256445440568999999999745686520454114532456-6677
Q ss_pred HHHHHHCCCCEEEECCEEECCCCCCCCCCCCCHHHH
Q ss_conf 999985389836620000023320024562100210
Q gi|254780178|r 255 ILKSVSYGVDMFDCVMPTRAGRHGLAFTRFGKINLR 290 (378)
Q Consensus 255 i~~~v~~GvDlFD~~~ptr~Ar~G~~~t~~g~i~l~ 290 (378)
.+.++..|+|.|||+..=.-.+.|.+-|-.=..+|.
T Consensus 237 ~laA~~aG~~~iD~si~GmG~~aGN~~tE~lv~~l~ 272 (310)
T d1sr9a2 237 AELGFAAGADRIEGCLFGNGERTGNVCLVTLGLNLF 272 (310)
T ss_dssp HHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHH
T ss_pred HHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 898874367789317766353227843999999998
No 34
>d1muma_ c.1.12.7 (A:) 2-methylisocitrate lyase {Escherichia coli [TaxId: 562]}
Probab=30.47 E-value=13 Score=14.38 Aligned_cols=54 Identities=15% Similarity=-0.079 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHEE---CCCCHHHH-HHHHHHHCCCCEEE
Q ss_conf 64222346766413567516789989998985077033100---25410189-99999853898366
Q gi|254780178|r 205 LKELDLKGYAIGGLAVGEPQEVMLHILSNVLPILPVERPHY---LMGVGTPD-DILKSVSYGVDMFD 267 (378)
Q Consensus 205 l~~~~~~G~aIgGl~~ge~~~~~~~ii~~~~~~LP~~kPr~---l~G~G~P~-~i~~~v~~GvDlFD 267 (378)
-.+.+.|+.-+.|+ .+.+++.++...+ + .|.. +.|-.+|. ..-++.++|+.++-
T Consensus 175 Y~eAGAD~vf~~~~---~~~~~~~~~~~~~----~--~Pl~~~~~~~~~~p~~s~~eL~~~Gv~~v~ 232 (289)
T d1muma_ 175 YVEAGAEMLFPEAI---TELAMYRQFADAV----Q--VPILANITEFGATPLFTTDELRSAHVAMAL 232 (289)
T ss_dssp HHHTTCSEEEETTC---CCHHHHHHHHHHH----C--SCBEEECCSSSSSCCCCHHHHHHTTCSEEE
T ss_pred HHHCCCCEEEECCC---CCHHHHHHHHHHC----C--CCEEEEECCCCCCCCCHHHHHHHHCCCEEE
T ss_conf 66459958984588---9999999998735----9--987976257677864039999971053677
No 35
>d1szia_ a.24.23.1 (A:) Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.37 E-value=14 Score=14.26 Aligned_cols=17 Identities=18% Similarity=0.286 Sum_probs=6.6
Q ss_pred HHHHHHHHHHCCCHHHH
Q ss_conf 99899989850770331
Q gi|254780178|r 227 MLHILSNVLPILPVERP 243 (378)
Q Consensus 227 ~~~ii~~~~~~LP~~kP 243 (378)
+.+.++.+++++-.+-|
T Consensus 196 ~~~~ld~lldyl~~ntP 212 (226)
T d1szia_ 196 AREALDNTVEYVAQNTP 212 (226)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHCCCC
T ss_conf 99999999999960899
No 36
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]}
Probab=27.54 E-value=15 Score=14.05 Aligned_cols=120 Identities=11% Similarity=0.080 Sum_probs=68.3
Q ss_pred EECHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 71299999998732897799601213322115899999998899999998851358886055402344436689999887
Q gi|254780178|r 125 RVSPEESVHIQNLLGSDIQMQLDECLALPAEDKELKRAMELSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAER 204 (378)
Q Consensus 125 ~ltpe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~sv~rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~ 204 (378)
....+.+++--...|.|=...-|.+.. .. ..+...|.+. .-. --.|..+ ...+.|.+.+..
T Consensus 108 ~~G~~~f~~~~~~~Gv~GliipDlP~e--e~-----------~~~~~~~~~~-~l~-~I~lvaP----tt~~~Ri~~i~~ 168 (267)
T d1qopa_ 108 NNGIDAFYARCEQVGVDSVLVADVPVE--ES-----------APFRQAALRH-NIA-PIFICPP----NADDDLLRQVAS 168 (267)
T ss_dssp TTCHHHHHHHHHHHTCCEEEETTCCGG--GC-----------HHHHHHHHHT-TCE-EECEECT----TCCHHHHHHHHH
T ss_pred HCCCHHHHHHHHHCCCCCEECCCHHHH--HH-----------HHHHHHHHCC-CCE-EEEEECC----CCCHHHHHHHHH
T ss_conf 068157899998659772124540345--46-----------7887765125-760-8997155----662788888875
Q ss_pred HHHHHHHHHHHHCCCC-CCC---HHHHHHHHHHHHHCCCHHHHEEC-CCCHHHHHHHHHHHCCCCEEE
Q ss_conf 6422234676641356-751---67899899989850770331002-541018999999853898366
Q gi|254780178|r 205 LKELDLKGYAIGGLAV-GEP---QEVMLHILSNVLPILPVERPHYL-MGVGTPDDILKSVSYGVDMFD 267 (378)
Q Consensus 205 l~~~~~~G~aIgGl~~-ge~---~~~~~~ii~~~~~~LP~~kPr~l-~G~G~P~~i~~~v~~GvDlFD 267 (378)
.+. + +-|.++..++ |.. .+...+.+..+.... ++|..+ ||+.+|+++...++.|.|..-
T Consensus 169 ~a~-g-FiY~vs~~GvTG~~~~~~~~~~~~i~~ik~~t--~~Pv~vGFGI~~~e~v~~~~~~~ADGvI 232 (267)
T d1qopa_ 169 YGR-G-YTYLLSRSGVTGAENRGALPLHHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAI 232 (267)
T ss_dssp HCC-S-CEEEESSSSCCCSSSCC--CCHHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HCC-H-HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCEEECCCCCHHHHHHHHHCCCCEEE
T ss_conf 073-3-55651033567753232124789998876523--6873120165999999999864899999
No 37
>d1jr8a_ a.24.15.1 (A:) Thiol oxidase Erv2p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.85 E-value=6.6 Score=16.46 Aligned_cols=33 Identities=9% Similarity=-0.095 Sum_probs=16.3
Q ss_pred CCCHHHCCCCHHHHHHHH---HCCCHHHHHHHHHHH
Q ss_conf 698133688989998868---578508999999999
Q gi|254780178|r 305 SHCSALRDYSRAYLHHLL---RVNESLAGMILSWAN 337 (378)
Q Consensus 305 C~C~~C~~ytraYl~HL~---~~~E~l~~~Ll~iHN 337 (378)
-.|..|+.|-..||.-.- .+++-+..-+..+||
T Consensus 46 lPC~~C~~h~~~~l~~~p~~~~sr~~l~~wl~~~HN 81 (105)
T d1jr8a_ 46 YPCGECSYHFVKLIEKYPVQTSSRTAAAMWGCHIHN 81 (105)
T ss_dssp CSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 386999989999998684446889999999999999
No 38
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]}
Probab=26.30 E-value=16 Score=13.91 Aligned_cols=119 Identities=15% Similarity=0.104 Sum_probs=53.5
Q ss_pred HHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 99999998732897799601213322115899999998899999998851358886055402344436689999887642
Q gi|254780178|r 128 PEESVHIQNLLGSDIQMQLDECLALPAEDKELKRAMELSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKE 207 (378)
Q Consensus 128 pe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~sv~rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~ 207 (378)
.++-++.....++|+++. |. ..-.. +. +.++.++.++... .....+.|-| -. .+.++.+.+
T Consensus 111 ~~~~~~~L~~ag~d~i~I-Dv-AhG~~--~~----v~~~i~~ir~~~~----~~~~IiAGNV----aT---~e~~~~L~~ 171 (362)
T d1pvna1 111 FRERVPALVEAGADVLCI-DS-SDGFS--EW----QKITIGWIREKYG----DKVKVGAGNI----VD---GEGFRYLAD 171 (362)
T ss_dssp HHHHHHHHHHHTCSEEEE-CC-SCCCB--HH----HHHHHHHHHHHHG----GGSCEEEEEE----CS---HHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEE-CH-HCCCH--HH----HHHHHHHHHHHHC----CCEEEECCCC----CC---HHHHHHHHH
T ss_conf 677777776418547753-00-00101--57----8899999988653----3103421244----67---889999997
Q ss_pred HHHHHHHHH--CC---------CCCCCH-HHHHHHHHHHHHCCCH----HHHEEC-CCCHHHHHHHHHHHCCCCEE
Q ss_conf 223467664--13---------567516-7899899989850770----331002-54101899999985389836
Q gi|254780178|r 208 LDLKGYAIG--GL---------AVGEPQ-EVMLHILSNVLPILPV----ERPHYL-MGVGTPDDILKSVSYGVDMF 266 (378)
Q Consensus 208 ~~~~G~aIg--Gl---------~~ge~~-~~~~~ii~~~~~~LP~----~kPr~l-~G~G~P~~i~~~v~~GvDlF 266 (378)
.+.|+.-+| += .+|-|+ ....++..... .... +-|..- =|+-+|-||..|.++|.|..
T Consensus 172 aGaD~vkVGIG~Gs~CTTr~~tGvG~Pq~sAv~e~a~~~~-~~~~~~~~~v~iiaDGGi~~~gdi~KAla~GAd~V 246 (362)
T d1pvna1 172 AGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERN-KYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFI 246 (362)
T ss_dssp HTCSEEEECSSCSTTBCHHHHTCBCCCHHHHHHHHHHHHH-HHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred HCCCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHH-HHHHHCCCCCCEEECCCCCCCCCEEEEEEEECCCE
T ss_conf 2975798443034343436555037716779999999998-75332036875353323474662357888713400
No 39
>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli [TaxId: 562]}
Probab=25.96 E-value=16 Score=13.87 Aligned_cols=50 Identities=22% Similarity=0.191 Sum_probs=22.3
Q ss_pred CCCCCCEEEECHHHHHHHHHH---CCCCEEEEEHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 144541587129999999873---289779960121332211589999999889
Q gi|254780178|r 117 SHIDGSLYRVSPEESVHIQNL---LGSDIQMQLDECLALPAEDKELKRAMELSL 167 (378)
Q Consensus 117 s~~dG~~~~ltpe~~i~~q~~---lg~DI~~~LD~~~~~~~~~k~~~~sv~rT~ 167 (378)
|..||++ +.+++..++-.+. -|+||+=.=.+-|.+.+..--.++-.+|..
T Consensus 27 SFsdgg~-~~~~~~a~~~a~~mi~~GAdiIDIGgeSTrPga~~vs~eeE~~Rl~ 79 (282)
T d1ajza_ 27 SFSDGGT-HNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVI 79 (282)
T ss_dssp TSTTTTC-SSHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHH
T ss_pred CCCCCCC-CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9989985-7799999999999998799799977823456666776889999899
No 40
>d7reqb2 c.23.6.1 (B:476-638) Methylmalonyl-CoA mutase beta subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=25.82 E-value=15 Score=14.03 Aligned_cols=20 Identities=15% Similarity=0.069 Sum_probs=16.5
Q ss_pred ECHHHHHHHHHHCCCCEEEE
Q ss_conf 12999999987328977996
Q gi|254780178|r 126 VSPEESVHIQNLLGSDIQMQ 145 (378)
Q Consensus 126 ltpe~~i~~q~~lg~DI~~~ 145 (378)
+++++.++.-..-++|+++.
T Consensus 73 ~~~~e~v~aa~~~~a~vvvi 92 (163)
T d7reqb2 73 GTTAEIVEAFKKSGAQVADL 92 (163)
T ss_dssp CCHHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHCCCCEEEE
T ss_conf 89489999999479988998
No 41
>d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]}
Probab=24.70 E-value=17 Score=13.71 Aligned_cols=47 Identities=19% Similarity=0.254 Sum_probs=29.8
Q ss_pred HHHHHHHHHHC---CCHHHHEECCC--CHHHHHHHHHHHCCCCEEEECCEEEC
Q ss_conf 99899989850---77033100254--10189999998538983662000002
Q gi|254780178|r 227 MLHILSNVLPI---LPVERPHYLMG--VGTPDDILKSVSYGVDMFDCVMPTRA 274 (378)
Q Consensus 227 ~~~ii~~~~~~---LP~~kPr~l~G--~G~P~~i~~~v~~GvDlFD~~~ptr~ 274 (378)
..+++..+... .-.+.|.-+.| +|+|..+..++.+|+|-|=| .|.+.
T Consensus 295 v~~lI~~a~~~~r~~~~~i~vsiCGE~a~dp~~~~~Li~lGi~~lSv-sp~~i 346 (366)
T d1h6za1 295 IGELVRIAVTKGRRVKPMLKMGICGEHGGDPATIGFCHKVGLDYVSC-SPFRV 346 (366)
T ss_dssp HHHHHHHHHHHHHHHSTTCEEEECSGGGGCHHHHHHHHHHTCSEEEE-CGGGH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEE-CHHHH
T ss_conf 99999999998775189981997064023999999999869997998-92776
No 42
>d1q0qa3 d.81.1.3 (A:126-274) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=23.44 E-value=13 Score=14.55 Aligned_cols=20 Identities=40% Similarity=0.627 Sum_probs=14.3
Q ss_pred CCCEEECCCC-CCCCHHHHCC
Q ss_conf 7722411454-3210122102
Q gi|254780178|r 87 FKPILTDSGG-FQVMSLSKLC 106 (378)
Q Consensus 87 ~~~ilTDSGg-fQv~sl~~~~ 106 (378)
...+||-||| |+-+++....
T Consensus 54 ~ki~LTASGGPF~~~~~~~l~ 74 (149)
T d1q0qa3 54 VSILLTGSGGPFRETPLRDLA 74 (149)
T ss_dssp EEEEEEECCCTTTTSCGGGGG
T ss_pred EEEEEECCCCCCCCCCHHHHH
T ss_conf 499997277510315656500
No 43
>d1goxa_ c.1.4.1 (A:) Glycolate oxidase {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=23.36 E-value=18 Score=13.55 Aligned_cols=45 Identities=22% Similarity=0.246 Sum_probs=31.3
Q ss_pred HHHHHHHCCCHHHHEECC-CCHHHHHHHHHHHCCCCEEEECCEEEC
Q ss_conf 999898507703310025-410189999998538983662000002
Q gi|254780178|r 230 ILSNVLPILPVERPHYLM-GVGTPDDILKSVSYGVDMFDCVMPTRA 274 (378)
Q Consensus 230 ii~~~~~~LP~~kPr~l~-G~G~P~~i~~~v~~GvDlFD~~~ptr~ 274 (378)
.+..+....+.+-|...- |+-+..||+.+++||.|..=-.-|..+
T Consensus 268 ~l~~i~~~~~~~~~iiadGGIR~G~Di~KALaLGAd~vgigrp~L~ 313 (359)
T d1goxa_ 268 ALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVF 313 (359)
T ss_dssp HHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEECHHHHH
T ss_conf 4556650347862146505757577899999848998987689999
No 44
>d1tb3a1 c.1.4.1 (A:1-349) Hydroxyacid oxidase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.70 E-value=18 Score=13.46 Aligned_cols=73 Identities=19% Similarity=0.241 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHCC---CCCCCHHHHHHHHHHHHHCCCHHHHEECC-CCHHHHHHHHHHHCCCCEEEECCEEEC
Q ss_conf 988764222346766413---56751678998999898507703310025-410189999998538983662000002
Q gi|254780178|r 201 SAERLKELDLKGYAIGGL---AVGEPQEVMLHILSNVLPILPVERPHYLM-GVGTPDDILKSVSYGVDMFDCVMPTRA 274 (378)
Q Consensus 201 Sa~~l~~~~~~G~aIgGl---~~ge~~~~~~~ii~~~~~~LP~~kPr~l~-G~G~P~~i~~~v~~GvDlFD~~~ptr~ 274 (378)
.+....+.+++|..+++- ... ......+.+..+....+.+.|.+.- |+-+..||+.+++||.|..=-.-|..+
T Consensus 230 da~~a~~~G~d~i~vsnhggr~~d-~~~~~~~~l~~i~~~~~~~~~iiadGGIR~G~Dv~KALALGA~~V~igrp~L~ 306 (349)
T d1tb3a1 230 DAELAMKHNVQGIVVSNHGGRQLD-EVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILW 306 (349)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSSC-SBCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSCEEESHHHHH
T ss_pred HHHHHHHHHCCCEEEECCCCCCCC-CCCCCHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECHHHHH
T ss_conf 899999851210011021100002-46531221210220157875688606767577899999858998998769999
No 45
>d1r3sa_ c.1.22.1 (A:) Uroporphyrinogen decarboxylase, UROD {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.46 E-value=19 Score=13.30 Aligned_cols=18 Identities=6% Similarity=-0.025 Sum_probs=9.0
Q ss_pred CHHHHHHHHHHHCCCCEE
Q ss_conf 101899999985389836
Q gi|254780178|r 249 VGTPDDILKSVSYGVDMF 266 (378)
Q Consensus 249 ~G~P~~i~~~v~~GvDlF 266 (378)
.+....+-.....|+|.+
T Consensus 253 ~~~~~~l~~~~~~g~d~i 270 (356)
T d1r3sa_ 253 KDGHFALEELAQAGYEVV 270 (356)
T ss_dssp TTCGGGHHHHTTSSCSEE
T ss_pred HHHHHHHHHHHCCCCCCC
T ss_conf 447878888742485612
No 46
>d1oqca_ a.24.15.1 (A:) Augmenter of liver regeneration {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.29 E-value=8.3 Score=15.79 Aligned_cols=18 Identities=11% Similarity=0.095 Sum_probs=12.5
Q ss_pred CCCCHHHCCCCHHHHHHH
Q ss_conf 669813368898999886
Q gi|254780178|r 304 ESHCSALRDYSRAYLHHL 321 (378)
Q Consensus 304 ~C~C~~C~~ytraYl~HL 321 (378)
-..|..|+.|-..||...
T Consensus 47 ~lPC~~Cr~h~~~~l~~~ 64 (112)
T d1oqca_ 47 FYPCEECAEDIRKRIDRS 64 (112)
T ss_dssp HCSCHHHHHHHHHHHHHS
T ss_pred HCCCHHHHHHHHHHHHHC
T ss_conf 076488998999999856
No 47
>d1a53a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=20.78 E-value=20 Score=13.21 Aligned_cols=35 Identities=17% Similarity=0.369 Sum_probs=27.7
Q ss_pred HHHHCCCHHHHEEC-CCCHHHHHHHHHHHCCCCEEE
Q ss_conf 89850770331002-541018999999853898366
Q gi|254780178|r 233 NVLPILPVERPHYL-MGVGTPDDILKSVSYGVDMFD 267 (378)
Q Consensus 233 ~~~~~LP~~kPr~l-~G~G~P~~i~~~v~~GvDlFD 267 (378)
...+.+|.+.++.. .|+.+|.++..+.+.|+|-|=
T Consensus 195 ~L~~~ip~~~~~IaESGI~t~~dv~~l~~~G~davL 230 (247)
T d1a53a_ 195 KLISMIPSNVVKVAESGISERNEIEELRKLGVNAFL 230 (247)
T ss_dssp HHHHHSCTTSEEEEESCCCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEE
T ss_conf 998528889869996389999999999977999999
No 48
>d1ea0a2 c.1.4.1 (A:423-1193) Alpha subunit of glutamate synthase, central and FMN domains {Azospirillum brasilense [TaxId: 192]}
Probab=20.72 E-value=19 Score=13.30 Aligned_cols=27 Identities=22% Similarity=0.303 Sum_probs=19.5
Q ss_pred CCHHHHHHHHHHHCCCCEEEECCEEEC
Q ss_conf 410189999998538983662000002
Q gi|254780178|r 248 GVGTPDDILKSVSYGVDMFDCVMPTRA 274 (378)
Q Consensus 248 G~G~P~~i~~~v~~GvDlFD~~~ptr~ 274 (378)
|+.+|.|++.+.+||.|.|-..-....
T Consensus 650 gl~t~~Dv~ka~aLGAD~v~~gt~~m~ 676 (771)
T d1ea0a2 650 GLKTGRDIVIAAMLGAEEFGIGTASLI 676 (771)
T ss_dssp SCCSHHHHHHHHHTTCSEEECCHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 988899999999837891677699999
No 49
>d1aw1a_ c.1.1.1 (A:) Triosephosphate isomerase {Vibrio marinus [TaxId: 90736]}
Probab=20.19 E-value=21 Score=13.12 Aligned_cols=43 Identities=21% Similarity=0.321 Sum_probs=22.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHH-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 0554023444366899998876-422234676641356751678998999898
Q gi|254780178|r 184 ALFGIVQGGDNINLRSFSAERL-KELDLKGYAIGGLAVGEPQEVMLHILSNVL 235 (378)
Q Consensus 184 ~lfgiVqGG~~~dLR~~Sa~~l-~~~~~~G~aIgGl~~ge~~~~~~~ii~~~~ 235 (378)
.|+| |.+.++- ++++ ...++||+.|||.++ +.+.+.+|+..+.
T Consensus 208 ilYG---GSV~~~N----~~~i~~~~~vDG~LVG~ASl--~~~~F~~Ii~~~~ 251 (255)
T d1aw1a_ 208 IQYG---GSVKPEN----AAAYFAQPDIDGALVGGAAL--DAKSFAAIAKAAA 251 (255)
T ss_dssp EEEC---SCCCTTT----HHHHHTSTTCCEEEESGGGG--SHHHHHHHHHHHH
T ss_pred EEEC---CCCCHHH----HHHHHCCCCCCEEEECHHHC--CHHHHHHHHHHHH
T ss_conf 8971---8878758----99995688988699536866--9899999999999
Done!