RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780179|ref|YP_003064592.1| hypothetical protein CLIBASIA_00310 [Candidatus Liberibacter asiaticus str. psy62] (75 letters) >gnl|CDD|140234 PTZ00207, PTZ00207, hypothetical protein; Provisional. Length = 591 Score = 24.8 bits (54), Expect = 5.1 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Query: 33 KRLSTQYKTLRKGILIPVVFSI----LYFTISKSIFPLSHF 69 KR + + + IP V I L+ T+ K+ PL +F Sbjct: 420 KRRAEDRVPITIALFIPSVCIITMLTLFLTLPKAALPLPYF 460 >gnl|CDD|183667 PRK12667, PRK12667, putative monovalent cation/H+ antiporter subunit D; Reviewed. Length = 520 Score = 24.2 bits (53), Expect = 7.1 Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 1/47 (2%) Query: 23 LSSLSYCHYGKRLSTQYKTLRKGILIPVVFSILYFTISKSIFPLSHF 69 LS+ + + + ++ FTI +IFP HF Sbjct: 199 LSAKIRGLSFPLTGGLAGNPPLALGVALALALWAFTIKAAIFPN-HF 244 >gnl|CDD|162112 TIGR00926, 2A1704, Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors). Length = 654 Score = 24.0 bits (52), Expect = 9.1 Identities = 7/26 (26%), Positives = 13/26 (50%) Query: 46 ILIPVVFSILYFTISKSIFPLSHFKK 71 I +P+ I+Y I+K + +K Sbjct: 295 IFVPIFDYIVYPAIAKCGTRFTSLRK 320 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.327 0.140 0.417 Gapped Lambda K H 0.267 0.0742 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 1,185,225 Number of extensions: 56654 Number of successful extensions: 160 Number of sequences better than 10.0: 1 Number of HSP's gapped: 160 Number of HSP's successfully gapped: 14 Length of query: 75 Length of database: 5,994,473 Length adjustment: 45 Effective length of query: 30 Effective length of database: 5,022,113 Effective search space: 150663390 Effective search space used: 150663390 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 50 (23.0 bits)