RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= gi|254780179|ref|YP_003064592.1| hypothetical protein CLIBASIA_00310 [Candidatus Liberibacter asiaticus str. psy62] (75 letters) >1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* 1xk1_A* ... Length = 233 Score = 24.3 bits (52), Expect = 8.1 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Query: 15 IDFNSNHLLSSLSYCHYGKRLSTQY---KTLRKGILIPVVFSILYFTISKSIFPLSHFKK 71 + LL + +Y Y LS K +K + +P L F +I + FK+ Sbjct: 121 VGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQ 180 Query: 72 HYR 74 YR Sbjct: 181 LYR 183 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.327 0.140 0.417 Gapped Lambda K H 0.267 0.0697 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 646,393 Number of extensions: 22652 Number of successful extensions: 115 Number of sequences better than 10.0: 1 Number of HSP's gapped: 115 Number of HSP's successfully gapped: 10 Length of query: 75 Length of database: 5,693,230 Length adjustment: 44 Effective length of query: 31 Effective length of database: 4,626,494 Effective search space: 143421314 Effective search space used: 143421314 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 50 (23.1 bits)