HHsearch alignment for GI: 254780180 and conserved domain: PRK00147
>PRK00147 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.
Probab=100.00 E-value=0 Score=1065.66 Aligned_cols=345 Identities=48% Similarity=0.788 Sum_probs=333.8
Q ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEEHHHHHHHCCCCCEEEEECCCEEEEEEEEEEECCCC
Q ss_conf 98633588889778616998781203135663788875315310143478726988799994795688899876404677
Q gi|254780180|r 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHIN 80 (360)
Q Consensus 1 M~lsdfDy~LP~elIAq~P~~~Rd~SRLLV~~r~~~~~~~i~h~~F~dl~~~L~~gDLLV~NnTKVipARL~g~k~~~~~ 80 (360)
T Consensus 1 M~lsdfdy~LP~elIAq~P~~~Rd~sRLLV~~~~~~---~i~h~~F~dl~~~L~~gDlLV~NnTkVipARL~g~k----- 72 (345)
T PRK00147 1 MKLSDFDFDLPEELIAQYPLEPRDASRLLVLDRRTG---EIEHRHFRDLLDYLRPGDLLVFNDTRVIPARLFGRK----- 72 (345)
T ss_pred CCHHHCCCCCCHHHHCCCCCCCCCCCEEEEEECCCC---CEEEEEHHHHHHHCCCCCEEEEECCEEEEEEEEEEE-----
T ss_conf 963342989995997579999866464889988999---477645644585479998999978989998999992-----
Q ss_pred CCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCC
Q ss_conf 77650589981124866101122115643698579970578874069999603557724999726786300025442035
Q gi|254780180|r 81 RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160 (360)
Q Consensus 81 ~~g~~ieill~~~~~~~~w~~l~kp~kklk~G~~l~~~~~~~~~~l~~~vi~~~~~g~~~i~f~~~~~~~~~~L~~~G~i 160 (360)
T Consensus 73 ~tgg~vEilll~~~~~~~w~~lvk~~kk~k~G~~l~~~~-----~~~~~v~~~~~~g~~~l~f~~~~~~~~~~l~~~G~~ 147 (345)
T PRK00147 73 ETGGKIEVLLLRPLGEDRWLALVRPAKRPKPGTKLLFGD-----GLKAEVLERLEDGGRILRFSYDGEIFLELLEELGHM 147 (345)
T ss_pred CCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEECC-----CEEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCC
T ss_conf 689879999987748987999995488899999998179-----848999996389769999758842799999975998
Q ss_pred CCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 78522212345652114331013456757400555688789999999997215530378731656657887410135667
Q gi|254780180|r 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240 (360)
Q Consensus 161 PLPPYI~r~r~~~~~D~~~YQTVyA~~~GSVAAPTAGLHFt~~ll~~L~~kGi~~~~iTLHVG~GTF~Pi~~~~i~~h~m 240 (360)
T Consensus 148 PLPPYI--kr~~~~~D~~rYQTVyA~~~GSVAAPTAGLHFt~~ll~~L~~kGi~~~~vTLHVG~GTF~Pv~~e~i~~H~m 225 (345)
T PRK00147 148 PLPPYI--KRPDEDADRERYQTVYAKEPGAVAAPTAGLHFTEELLEKLKAKGVEIAFVTLHVGAGTFRPVRVEDIEEHKM 225 (345)
T ss_pred CCCCCC--CCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 998302--577653468876465427998343475778789999999997797289999985566575555455455777
Q ss_pred CCHHEEECHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCHHHH
Q ss_conf 70007785999999998753798099962878998999985289846888722366574096114312552775545789
Q gi|254780180|r 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTL 320 (360)
Q Consensus 241 H~E~~~i~~~~~~~I~~ak~~g~rIiAVGTT~~R~LEs~~~~~~~~~~~~g~T~lfI~Pg~~f~~vd~LiTNFH~P~Stl 320 (360)
T Consensus 226 H~E~~~I~~~t~~~I~~ak~~g~rIiAVGTT~~RaLEsa~~~~g~~~~~~g~TdlfI~Pgy~f~~vd~LiTNFHlPkStL 305 (345)
T PRK00147 226 HSEWYEVSQETADAINATKARGGRVIAVGTTSVRTLESAARADGELKPFSGETDIFIYPGYRFKVVDALITNFHLPKSTL 305 (345)
T ss_pred CCEEEEECHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEECEEEECCCCCCCHH
T ss_conf 66589989999999998886498699992528999999997379704677844879789997618187422573783489
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCHHHCCCCC
Q ss_conf 9999987198999999999998698261101022233679
Q gi|254780180|r 321 LMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360 (360)
Q Consensus 321 l~Lv~Af~G~~~~~~~Y~~Ai~~~yrF~syGDamLi~~~~ 360 (360)
T Consensus 306 lmLVsAf~G~~~~~~aY~~Ai~~~YrF~SyGDamLi~~~~ 345 (345)
T PRK00147 306 LMLVSAFAGRERILAAYKHAIEEKYRFFSYGDAMLILRNA 345 (345)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCHHEECCCC
T ss_conf 9999996797999999999998598345324230043689