HHsearch alignment for GI: 254780180 and conserved domain: PRK00147

>PRK00147 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.
Probab=100.00  E-value=0  Score=1065.66  Aligned_cols=345  Identities=48%  Similarity=0.788  Sum_probs=333.8

Q ss_pred             CCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEEHHHHHHHCCCCCEEEEECCCEEEEEEEEEEECCCC
Q ss_conf             98633588889778616998781203135663788875315310143478726988799994795688899876404677
Q gi|254780180|r    1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHIN   80 (360)
Q Consensus         1 M~lsdfDy~LP~elIAq~P~~~Rd~SRLLV~~r~~~~~~~i~h~~F~dl~~~L~~gDLLV~NnTKVipARL~g~k~~~~~   80 (360)
T Consensus         1 M~lsdfdy~LP~elIAq~P~~~Rd~sRLLV~~~~~~---~i~h~~F~dl~~~L~~gDlLV~NnTkVipARL~g~k-----   72 (345)
T PRK00147          1 MKLSDFDFDLPEELIAQYPLEPRDASRLLVLDRRTG---EIEHRHFRDLLDYLRPGDLLVFNDTRVIPARLFGRK-----   72 (345)
T ss_pred             CCHHHCCCCCCHHHHCCCCCCCCCCCEEEEEECCCC---CEEEEEHHHHHHHCCCCCEEEEECCEEEEEEEEEEE-----
T ss_conf             963342989995997579999866464889988999---477645644585479998999978989998999992-----


Q ss_pred             CCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCC
Q ss_conf             77650589981124866101122115643698579970578874069999603557724999726786300025442035
Q gi|254780180|r   81 RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI  160 (360)
Q Consensus        81 ~~g~~ieill~~~~~~~~w~~l~kp~kklk~G~~l~~~~~~~~~~l~~~vi~~~~~g~~~i~f~~~~~~~~~~L~~~G~i  160 (360)
T Consensus        73 ~tgg~vEilll~~~~~~~w~~lvk~~kk~k~G~~l~~~~-----~~~~~v~~~~~~g~~~l~f~~~~~~~~~~l~~~G~~  147 (345)
T PRK00147         73 ETGGKIEVLLLRPLGEDRWLALVRPAKRPKPGTKLLFGD-----GLKAEVLERLEDGGRILRFSYDGEIFLELLEELGHM  147 (345)
T ss_pred             CCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEECC-----CEEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCC
T ss_conf             689879999987748987999995488899999998179-----848999996389769999758842799999975998


Q ss_pred             CCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             78522212345652114331013456757400555688789999999997215530378731656657887410135667
Q gi|254780180|r  161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM  240 (360)
Q Consensus       161 PLPPYI~r~r~~~~~D~~~YQTVyA~~~GSVAAPTAGLHFt~~ll~~L~~kGi~~~~iTLHVG~GTF~Pi~~~~i~~h~m  240 (360)
T Consensus       148 PLPPYI--kr~~~~~D~~rYQTVyA~~~GSVAAPTAGLHFt~~ll~~L~~kGi~~~~vTLHVG~GTF~Pv~~e~i~~H~m  225 (345)
T PRK00147        148 PLPPYI--KRPDEDADRERYQTVYAKEPGAVAAPTAGLHFTEELLEKLKAKGVEIAFVTLHVGAGTFRPVRVEDIEEHKM  225 (345)
T ss_pred             CCCCCC--CCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf             998302--577653468876465427998343475778789999999997797289999985566575555455455777


Q ss_pred             CCHHEEECHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCHHHH
Q ss_conf             70007785999999998753798099962878998999985289846888722366574096114312552775545789
Q gi|254780180|r  241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTL  320 (360)
Q Consensus       241 H~E~~~i~~~~~~~I~~ak~~g~rIiAVGTT~~R~LEs~~~~~~~~~~~~g~T~lfI~Pg~~f~~vd~LiTNFH~P~Stl  320 (360)
T Consensus       226 H~E~~~I~~~t~~~I~~ak~~g~rIiAVGTT~~RaLEsa~~~~g~~~~~~g~TdlfI~Pgy~f~~vd~LiTNFHlPkStL  305 (345)
T PRK00147        226 HSEWYEVSQETADAINATKARGGRVIAVGTTSVRTLESAARADGELKPFSGETDIFIYPGYRFKVVDALITNFHLPKSTL  305 (345)
T ss_pred             CCEEEEECHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEECEEEECCCCCCCHH
T ss_conf             66589989999999998886498699992528999999997379704677844879789997618187422573783489


Q ss_pred             HHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCHHHCCCCC
Q ss_conf             9999987198999999999998698261101022233679
Q gi|254780180|r  321 LMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR  360 (360)
Q Consensus       321 l~Lv~Af~G~~~~~~~Y~~Ai~~~yrF~syGDamLi~~~~  360 (360)
T Consensus       306 lmLVsAf~G~~~~~~aY~~Ai~~~YrF~SyGDamLi~~~~  345 (345)
T PRK00147        306 LMLVSAFAGRERILAAYKHAIEEKYRFFSYGDAMLILRNA  345 (345)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCHHEECCCC
T ss_conf             9999996797999999999998598345324230043689