HHsearch alignment for GI: 254780180 and conserved domain: PRK01424
>PRK01424 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.
Probab=100.00 E-value=0 Score=1025.22 Aligned_cols=337 Identities=44% Similarity=0.750 Sum_probs=318.1
Q ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEEHHHHHHHCCCCCEEEEECCCEEEEEEEEEEECCCC
Q ss_conf 98633588889778616998781203135663788875315310143478726988799994795688899876404677
Q gi|254780180|r 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHIN 80 (360)
Q Consensus 1 M~lsdfDy~LP~elIAq~P~~~Rd~SRLLV~~r~~~~~~~i~h~~F~dl~~~L~~gDLLV~NnTKVipARL~g~k~~~~~ 80 (360)
T Consensus 1 M~lsdfdy~LP~elIAq~P~~~Rd~SRLLV~~~~~-----~-~~~F~dl~~~L~~gDlLV~NnTkVipARL~~------- 67 (366)
T PRK01424 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLIAVTPP-----I-KTKFYNIIDYLKEGDLLVFNNSKVIKAKLNL------- 67 (366)
T ss_pred CCHHHCCCCCCHHHHCCCCCCCCCCCEEEECCCCC-----C-EEEEECHHHHCCCCCEEEEECCEEEEEEEEC-------
T ss_conf 95213388989599767998997514221517986-----4-0566030642899999999899987568854-------
Q ss_pred CCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCC
Q ss_conf 77650589981124866101122115643698579970578874069999603557724999726786300025442035
Q gi|254780180|r 81 RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160 (360)
Q Consensus 81 ~~g~~ieill~~~~~~~~w~~l~kp~kklk~G~~l~~~~~~~~~~l~~~vi~~~~~g~~~i~f~~~~~~~~~~L~~~G~i 160 (360)
T Consensus 68 --gk~vei~l~~~l~~~~w~~l~kp~kk~~~G~~l~~~~------~~~~v~~~~~~g~~~~~f~~~~~~~~~~l~~~G~~ 139 (366)
T PRK01424 68 --GKNITINLNQKLSDNSWSAFAKPARKLNVGDEFYFDN------HKVIITEKLAMGEIKVKFELDNISVFEFLDKYGEM 139 (366)
T ss_pred --CCCEEEEEEEECCCCEEEEEEECCCCCCCCCEEEECC------CEEEEEEECCCCEEEEEEECCCCCHHHHHHHCCCC
T ss_conf --8823899876416874899995267874699898679------74899995069629999957998699999865999
Q ss_pred CCCHHHCCCCC----------------------------CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 78522212345----------------------------65211433101345675740055568878999999999721
Q gi|254780180|r 161 PLPPYIARKRP----------------------------IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212 (360)
Q Consensus 161 PLPPYI~r~r~----------------------------~~~~D~~~YQTVyA~~~GSVAAPTAGLHFt~~ll~~L~~kG 212 (360)
T Consensus 140 PLPPYI~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~rYQTVyA~~~GSVAAPTAGLHFt~~ll~~L~~kG 219 (366)
T PRK01424 140 PLPVYIRRSHSLCHPVATLTGSKTNNNNDWIPWSNDGMTDQKNDNDRYQTIYSQIEGSVAAPTAGLHFTKDILDKLKAKG 219 (366)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCC
T ss_conf 99875205554553323333332333223444333456752014666412432888840167676888999999999869
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 55303787316566578874101356677000778599999999875379809996287899899998528984688872
Q gi|254780180|r 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292 (360)
Q Consensus 213 i~~~~iTLHVG~GTF~Pi~~~~i~~h~mH~E~~~i~~~~~~~I~~ak~~g~rIiAVGTT~~R~LEs~~~~~~~~~~~~g~ 292 (360)
T Consensus 220 v~ia~vTLHVG~GTF~PV~~e~i~~H~mH~E~~~I~~~t~~~In~ak~~g~RViAVGTT~vRaLEs~~~-~g~~~~~~g~ 298 (366)
T PRK01424 220 IQTAFVTLHVGAGTFLPVKTENIHEHKMHTEYCSITPETAEIINKAKQEGRRIIAVGTTTLRTLESSCN-NGIVKAGSFE 298 (366)
T ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH-CCCCCCCCCC
T ss_conf 927999998657764788877633588746689979999999999987189289994516887887751-6985778883
Q ss_pred CCEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCHHHCCCC
Q ss_conf 2366574096114312552775545789999998719899999999999869826110102223367
Q gi|254780180|r 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359 (360)
Q Consensus 293 T~lfI~Pg~~f~~vd~LiTNFH~P~Stll~Lv~Af~G~~~~~~~Y~~Ai~~~yrF~syGDamLi~~~ 359 (360)
T Consensus 299 TdlfI~Pgy~fkvvD~LiTNFHlPkSTLlmLVsAfaG~~~~~~aY~~Ai~~~YRF~SyGDamLI~rk 365 (366)
T PRK01424 299 TDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKEMHELYKYAIKEKMRFFSYGDATLLYRK 365 (366)
T ss_pred CCEEECCCCCCCEECEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHEECC
T ss_conf 2869789898858186454674782599999999579699999999999879861052305525336