HHsearch alignment for GI: 254780180 and conserved domain: PRK01424

>PRK01424 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.
Probab=100.00  E-value=0  Score=1025.22  Aligned_cols=337  Identities=44%  Similarity=0.750  Sum_probs=318.1

Q ss_pred             CCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEEHHHHHHHCCCCCEEEEECCCEEEEEEEEEEECCCC
Q ss_conf             98633588889778616998781203135663788875315310143478726988799994795688899876404677
Q gi|254780180|r    1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHIN   80 (360)
Q Consensus         1 M~lsdfDy~LP~elIAq~P~~~Rd~SRLLV~~r~~~~~~~i~h~~F~dl~~~L~~gDLLV~NnTKVipARL~g~k~~~~~   80 (360)
T Consensus         1 M~lsdfdy~LP~elIAq~P~~~Rd~SRLLV~~~~~-----~-~~~F~dl~~~L~~gDlLV~NnTkVipARL~~-------   67 (366)
T PRK01424          1 MKLSDFDFDLPSELIAQYPSSERDNSDLLIAVTPP-----I-KTKFYNIIDYLKEGDLLVFNNSKVIKAKLNL-------   67 (366)
T ss_pred             CCHHHCCCCCCHHHHCCCCCCCCCCCEEEECCCCC-----C-EEEEECHHHHCCCCCEEEEECCEEEEEEEEC-------
T ss_conf             95213388989599767998997514221517986-----4-0566030642899999999899987568854-------


Q ss_pred             CCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCC
Q ss_conf             77650589981124866101122115643698579970578874069999603557724999726786300025442035
Q gi|254780180|r   81 RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI  160 (360)
Q Consensus        81 ~~g~~ieill~~~~~~~~w~~l~kp~kklk~G~~l~~~~~~~~~~l~~~vi~~~~~g~~~i~f~~~~~~~~~~L~~~G~i  160 (360)
T Consensus        68 --gk~vei~l~~~l~~~~w~~l~kp~kk~~~G~~l~~~~------~~~~v~~~~~~g~~~~~f~~~~~~~~~~l~~~G~~  139 (366)
T PRK01424         68 --GKNITINLNQKLSDNSWSAFAKPARKLNVGDEFYFDN------HKVIITEKLAMGEIKVKFELDNISVFEFLDKYGEM  139 (366)
T ss_pred             --CCCEEEEEEEECCCCEEEEEEECCCCCCCCCEEEECC------CEEEEEEECCCCEEEEEEECCCCCHHHHHHHCCCC
T ss_conf             --8823899876416874899995267874699898679------74899995069629999957998699999865999


Q ss_pred             CCCHHHCCCCC----------------------------CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             78522212345----------------------------65211433101345675740055568878999999999721
Q gi|254780180|r  161 PLPPYIARKRP----------------------------IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG  212 (360)
Q Consensus       161 PLPPYI~r~r~----------------------------~~~~D~~~YQTVyA~~~GSVAAPTAGLHFt~~ll~~L~~kG  212 (360)
T Consensus       140 PLPPYI~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~rYQTVyA~~~GSVAAPTAGLHFt~~ll~~L~~kG  219 (366)
T PRK01424        140 PLPVYIRRSHSLCHPVATLTGSKTNNNNDWIPWSNDGMTDQKNDNDRYQTIYSQIEGSVAAPTAGLHFTKDILDKLKAKG  219 (366)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCC
T ss_conf             99875205554553323333332333223444333456752014666412432888840167676888999999999869


Q ss_pred             CCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             55303787316566578874101356677000778599999999875379809996287899899998528984688872
Q gi|254780180|r  213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF  292 (360)
Q Consensus       213 i~~~~iTLHVG~GTF~Pi~~~~i~~h~mH~E~~~i~~~~~~~I~~ak~~g~rIiAVGTT~~R~LEs~~~~~~~~~~~~g~  292 (360)
T Consensus       220 v~ia~vTLHVG~GTF~PV~~e~i~~H~mH~E~~~I~~~t~~~In~ak~~g~RViAVGTT~vRaLEs~~~-~g~~~~~~g~  298 (366)
T PRK01424        220 IQTAFVTLHVGAGTFLPVKTENIHEHKMHTEYCSITPETAEIINKAKQEGRRIIAVGTTTLRTLESSCN-NGIVKAGSFE  298 (366)
T ss_pred             CCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH-CCCCCCCCCC
T ss_conf             927999998657764788877633588746689979999999999987189289994516887887751-6985778883


Q ss_pred             CCEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCHHHCCCC
Q ss_conf             2366574096114312552775545789999998719899999999999869826110102223367
Q gi|254780180|r  293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK  359 (360)
Q Consensus       293 T~lfI~Pg~~f~~vd~LiTNFH~P~Stll~Lv~Af~G~~~~~~~Y~~Ai~~~yrF~syGDamLi~~~  359 (360)
T Consensus       299 TdlfI~Pgy~fkvvD~LiTNFHlPkSTLlmLVsAfaG~~~~~~aY~~Ai~~~YRF~SyGDamLI~rk  365 (366)
T PRK01424        299 TDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKEMHELYKYAIKEKMRFFSYGDATLLYRK  365 (366)
T ss_pred             CCEEECCCCCCCEECEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHEECC
T ss_conf             2869789898858186454674782599999999579699999999999879861052305525336