HHsearch alignment of GI: 254780180 and MMDB domain: 1vky_A_77-173
>1vky_A (A:77-173) S-adenosylmethionine:tRNA ribosyltransferase- isomerase; TM0574, structural genomics, JCSG, protein structure initiative, PSI; 2.00A {Thermotoga maritima}
Probab=99.87 E-value=1.4e-22 Score=182.84 Aligned_cols=97 Identities=30% Similarity=0.442 Sum_probs=88.2
Q ss_pred EEEEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCC
Q ss_conf 88998764046777765058998112486610112211564369857997057887406999960355772499972678
Q gi|254780180|r 68 TAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISG 147 (360)
Q Consensus 68 pARL~g~k~~~~~~~g~~ieill~~~~~~~~w~~l~kp~kklk~G~~l~~~~~~~~~~l~~~vi~~~~~g~~~i~f~~~~ 147 (360)
||||+|+| .+|++||++++++++++.|.||+||+|++|+|++|.|.+ .++++|+++.++|.++++|+.+
T Consensus 1 PARL~g~k-----~tG~~vEilll~~l~~~~w~~l~k~~k~~k~G~~l~~~~-----~~~~~v~~~~~~g~~~v~f~~~- 69 (97)
T 1vky_A 1 PARLYARK-----KTGASIEILLIERLEEGIWKCLVRPGQKVKKGTELVIDE-----DLSAVCLGRGEDGTRILKFQPQ- 69 (97)
T ss_dssp SCEEEEBC--------CCEEEEEEEEEETTEEEEEEESCTTCCTTCEEEEET-----TEEEEEEEECTTSCEEEEEESC-
T ss_pred EEEEEEEE-----CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEECC-----CCCEEEEEECCCCEEEEECCCC-
T ss_conf 88999981-----334642047776426876999961665677886798527-----7406999861541367731675-
Q ss_pred CCHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHCC
Q ss_conf 63000254420357852221234565211433101
Q gi|254780180|r 148 IELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182 (360)
Q Consensus 148 ~~~~~~L~~~G~iPLPPYI~r~r~~~~~D~~~YQT 182 (360)
++++|+++|+|||||||+| +.|.+||||
T Consensus 70 --~~~~le~~G~iPLPPYI~r-----~~D~erYQT 97 (97)
T 1vky_A 70 --DDRLIFEKGRTPLPPYIKN-----EVPLERYQT 97 (97)
T ss_dssp --CHHHHHHHC------------------------
T ss_pred --CHHHHHHCCCCCCCCHHCC-----CCHHHHHHH
T ss_conf --3577986599888932214-----315999999