HHsearch alignment of GI: 254780180 and MMDB domain: 1vky_A_77-173

>1vky_A (A:77-173) S-adenosylmethionine:tRNA ribosyltransferase- isomerase; TM0574, structural genomics, JCSG, protein structure initiative, PSI; 2.00A {Thermotoga maritima}
Probab=99.87  E-value=1.4e-22  Score=182.84  Aligned_cols=97  Identities=30%  Similarity=0.442  Sum_probs=88.2

Q ss_pred             EEEEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCC
Q ss_conf             88998764046777765058998112486610112211564369857997057887406999960355772499972678
Q gi|254780180|r   68 TAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISG  147 (360)
Q Consensus        68 pARL~g~k~~~~~~~g~~ieill~~~~~~~~w~~l~kp~kklk~G~~l~~~~~~~~~~l~~~vi~~~~~g~~~i~f~~~~  147 (360)
                      ||||+|+|     .+|++||++++++++++.|.||+||+|++|+|++|.|.+     .++++|+++.++|.++++|+.+ 
T Consensus         1 PARL~g~k-----~tG~~vEilll~~l~~~~w~~l~k~~k~~k~G~~l~~~~-----~~~~~v~~~~~~g~~~v~f~~~-   69 (97)
T 1vky_A            1 PARLYARK-----KTGASIEILLIERLEEGIWKCLVRPGQKVKKGTELVIDE-----DLSAVCLGRGEDGTRILKFQPQ-   69 (97)
T ss_dssp             SCEEEEBC--------CCEEEEEEEEEETTEEEEEEESCTTCCTTCEEEEET-----TEEEEEEEECTTSCEEEEEESC-
T ss_pred             EEEEEEEE-----CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEECC-----CCCEEEEEECCCCEEEEECCCC-
T ss_conf             88999981-----334642047776426876999961665677886798527-----7406999861541367731675-


Q ss_pred             CCHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHCC
Q ss_conf             63000254420357852221234565211433101
Q gi|254780180|r  148 IELERQISLVGTIPLPPYIARKRPIDARDYVDYQT  182 (360)
Q Consensus       148 ~~~~~~L~~~G~iPLPPYI~r~r~~~~~D~~~YQT  182 (360)
                        ++++|+++|+|||||||+|     +.|.+||||
T Consensus        70 --~~~~le~~G~iPLPPYI~r-----~~D~erYQT   97 (97)
T 1vky_A           70 --DDRLIFEKGRTPLPPYIKN-----EVPLERYQT   97 (97)
T ss_dssp             --CHHHHHHHC------------------------
T ss_pred             --CHHHHHHCCCCCCCCHHCC-----CCHHHHHHH
T ss_conf             --3577986599888932214-----315999999