BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780180|ref|YP_003064593.1| S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Candidatus Liberibacter asiaticus str.
psy62]
(360 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
Results from round 1
>gi|254780180|ref|YP_003064593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter asiaticus str. psy62]
gi|254039857|gb|ACT56653.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter asiaticus str. psy62]
Length = 360
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV
Sbjct: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ
Sbjct: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY
Sbjct: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM
Sbjct: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG
Sbjct: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR
Sbjct: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
>gi|315122778|ref|YP_004063267.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496180|gb|ADR52779.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 359
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 285/359 (79%), Positives = 321/359 (89%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
MMVKEFDF LP SRIALRPV PRDSARLMVV+PNLSC +ISD+ V DLP FLNSNDAIV
Sbjct: 1 MMVKEFDFHLPSSRIALRPVSPRDSARLMVVYPNLSCSQMISDYSVRDLPIFLNSNDAIV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI AQL G R N E ISCTLHMR+S NSWS Y RP K+I++GD ++FFSQ
Sbjct: 61 FNNTKVIAAQLRGRRLRRTNDSEHWISCTLHMRISSNSWSAYVRPGKIIRQGDTIYFFSQ 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQS+LEA VI+K +TGEILLVF +SG EL+RQI+L+GT+PLPPYIA+KRPID RDYVDY
Sbjct: 121 DGQSKLEANVIEKRDTGEILLVFPLSGTELDRQIALIGTMPLPPYIAKKRPIDERDYVDY 180
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTTYA IQGSVAAPTAGLHFTS+LLS+L+S+G+ VYF+TLHVGAGTFMPV+VEDTDDHIM
Sbjct: 181 QTTYASIQGSVAAPTAGLHFTSDLLSKLVSMGVAVYFITLHVGAGTFMPVRVEDTDDHIM 240
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEIGFIDA TAQ LN+VK RGGRIV+VGTTSLRLLETATTEDGII P SG+TNIFITPG
Sbjct: 241 HSEIGFIDAQTAQDLNAVKLRGGRIVAVGTTSLRLLETATTEDGIIMPLSGYTNIFITPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFRAVD+L+SNFHLPKSTLLMLVSAFCG+EETK MYQHAI+++YRFYSYGD SL+F+K
Sbjct: 301 YRFRAVDVLLSNFHLPKSTLLMLVSAFCGVEETKTMYQHAIANSYRFYSYGDASLIFKK 359
>gi|325293064|ref|YP_004278928.1| S-adenosylmethionine tRNA ribosyltransferase [Agrobacterium sp.
H13-3]
gi|325060917|gb|ADY64608.1| S-adenosylmethionine tRNA ribosyltransferase [Agrobacterium sp.
H13-3]
Length = 374
Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/363 (61%), Positives = 267/363 (73%), Gaps = 8/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSARL+VV PN + D +VSDL +FL DA+V
Sbjct: 15 MRVDLFDFDLPEANIALRPANPRDSARLLVVDPNADH---MEDRIVSDLTSFLKPGDALV 71
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FS 119
FN+T+VI AQL GVR E +S TLHMR + W +ARP K IK+GD + F +
Sbjct: 72 FNDTRVIPAQLEGVRLRE-GAPETAVSATLHMRADQSRWKAFARPGKRIKQGDRIRFGYE 130
Query: 120 QD---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+D G + LEATV +K GEI L+F +SG L+ I+ VG IPLPPYIA KRP DA+D
Sbjct: 131 RDNACGLAHLEATVEEKGEEGEITLLFDVSGPVLDEAIASVGHIPLPPYIAAKRPEDAQD 190
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGTF+PVK +DTD
Sbjct: 191 QTDYQTIYAREKGAVAAPTAGLHFTPDLFAALDEAGIERHFVTLHVGAGTFLPVKADDTD 250
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH EIG + TA LN+VK+RGGRIVSVGTTSLRL+E+AT E+G+I PWSG T IF
Sbjct: 251 DHKMHFEIGHVSQETAAKLNAVKARGGRIVSVGTTSLRLIESATDENGVIQPWSGATGIF 310
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVDILM+NFHLPKSTL MLVSAFCG+E + Y HAI YRFYSYGD+SLL
Sbjct: 311 ITPGYRFRAVDILMTNFHLPKSTLFMLVSAFCGLETMRAAYAHAIETGYRFYSYGDSSLL 370
Query: 357 FQK 359
F+K
Sbjct: 371 FRK 373
>gi|222148799|ref|YP_002549756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium vitis S4]
gi|254764261|sp|B9JWX0|QUEA_AGRVS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221735785|gb|ACM36748.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium vitis S4]
Length = 352
Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/359 (61%), Positives = 265/359 (73%), Gaps = 9/359 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD AR ++V P+ S L++ D V +LP+FL + DA+V
Sbjct: 1 MRVDLFDFDLPDENIALRPANPRDQARFLIVRPDGS--LMLEDRRVFELPSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR R +SCTLHMRV+ N W +ARP K IK+GD++ F
Sbjct: 59 FNDTKVIPAQLEGVRIREGAER-TPVSCTLHMRVAANRWKAFARPGKRIKQGDVIDF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG L A V +K GEI L F+ SG +L+R I+ VG IPLPPYIA KRP D++D DY
Sbjct: 115 DG---LSANVAEKGEAGEIDLEFAASGPDLDRAIAGVGHIPLPPYIAAKRPEDSQDRTDY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTDDH M
Sbjct: 172 QTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTDDHKM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H EIG + A TA+ALN+VK+RGGRIVSVGTTSLRLLE+A +EDG + PWS T IFITPG
Sbjct: 232 HQEIGHVSAETAEALNAVKARGGRIVSVGTTSLRLLESAASEDGRLLPWSDATGIFITPG 291
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+AVD+LM+NFHLPKSTL MLVSAF G+E + Y HAI YRFYSYGD+SLLF+K
Sbjct: 292 YRFKAVDVLMTNFHLPKSTLFMLVSAFAGLETMRAAYAHAIETGYRFYSYGDSSLLFRK 350
>gi|327193336|gb|EGE60240.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CNPAF512]
Length = 366
Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/366 (59%), Positives = 265/366 (72%), Gaps = 9/366 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPN---LSCPLVISDHLVSDLPAFLNSND 57
M V FDFDLP RIALRP PRDSARL+VV+P+ + +SDH V DLP+FL + D
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESVHAESALSDHHVYDLPSFLRAGD 60
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
A+VFN+TKVI AQL G+R +++S TLHMR+ PN W +A+P K IK+GD +
Sbjct: 61 ALVFNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRIGPNRWKAFAKPGKRIKEGDRI-A 118
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
F G+S L+ATV +K GE+ L F ++G LE I+ VG IPLPPYIA KRP D
Sbjct: 119 FGHSGESCFLGSLDATVEEKGEAGEVTLAFDLTGPALEEAIAAVGHIPLPPYIAAKRPED 178
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGTF+PVK +
Sbjct: 179 ERDRADYQTIYAREEGAVAAPTAGLHFTPDLFAALDKAGIERHFVTLHVGAGTFLPVKAD 238
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DTDDH MH E G++ A A LN+VK+RGGRIV VGTTSLRLLE+A EDG I PW+G T
Sbjct: 239 DTDDHKMHLESGYVSAEIAARLNAVKARGGRIVCVGTTSLRLLESAAGEDGKIKPWAGAT 298
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD
Sbjct: 299 GIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYEHAISTGYRFYSYGDA 358
Query: 354 SLLFQK 359
SLLF+K
Sbjct: 359 SLLFRK 364
>gi|159184871|ref|NP_354665.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium tumefaciens str. C58]
gi|22096020|sp|Q8UES7|QUEA_AGRT5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|159140152|gb|AAK87450.2| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Agrobacterium tumefaciens str. C58]
Length = 366
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/369 (60%), Positives = 266/369 (72%), Gaps = 14/369 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRDSARL+VV PN + + DH V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPEENIALRPANPRDSARLLVVDPNEN---RMEDHRVFDLPSFLRPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FS 119
FN+T+VI AQL GVR E +S TLHMR + W +ARP K IK+GD + F +
Sbjct: 58 FNDTRVIPAQLEGVRLRE-GAPETAVSATLHMRADQSRWKAFARPGKRIKEGDRIRFGYD 116
Query: 120 QD---------GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+D G + LEATV +K GEI L+F ISG L+ I+ VG IPLPPYIA KR
Sbjct: 117 RDTVNSSSGACGLAHLEATVEEKGEEGEITLLFDISGPVLDEAIASVGHIPLPPYIAAKR 176
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P D +D DYQT YA+ +G+VAAPTAGLHFT +L L S GI+ +FVTLHVGAGTF+PV
Sbjct: 177 PEDQQDQTDYQTIYAREKGAVAAPTAGLHFTPDLFEALDSAGIERHFVTLHVGAGTFLPV 236
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
K +DTDDH MH EIG++ TA LN+VK+RGGRIV VGTTSLRL+E+A TEDG I+PWS
Sbjct: 237 KSDDTDDHKMHFEIGYVSQETADRLNAVKARGGRIVCVGTTSLRLIESAATEDGTIHPWS 296
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAFCG+E + Y+HAI YRFYSY
Sbjct: 297 DATGIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFCGLETMRDAYRHAIETGYRFYSY 356
Query: 351 GDTSLLFQK 359
GD+SLLF+K
Sbjct: 357 GDSSLLFRK 365
>gi|227822132|ref|YP_002826103.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium fredii NGR234]
gi|227341132|gb|ACP25350.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium fredii NGR234]
Length = 366
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/367 (60%), Positives = 268/367 (73%), Gaps = 16/367 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P L SD V DLP+FL+ DA+V
Sbjct: 6 MRVDLFDFDLPETSIALRPASPRDSARMLVVRPQREPAL--SDFGVLDLPSFLSPGDALV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKVI AQL G+R RR + ++S TLHMRV+P+ W +ARP++ +K GD +
Sbjct: 64 FNDTKVIPAQLEGIR-----RRGEDVATQVSLTLHMRVAPDRWKAFARPARRLKPGDRIS 118
Query: 117 FFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G + L+ATV +K GE+ L F +SG L+ I VG IPLPPYIA KR
Sbjct: 119 F-GHGGNACLLGSLDATVEEKGEAGEVTLRFELSGPVLDEAIMSVGHIPLPPYIASKRSE 177
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
DARD DYQT YA+ +G+VAAPTAGLHFT L +L GI+ +FVTLHVGAGTF+PVK
Sbjct: 178 DARDRADYQTVYAREEGAVAAPTAGLHFTDRLFGKLDEAGIERHFVTLHVGAGTFLPVKA 237
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+DTDDH+MH EIG +DA TA+ LN+V++RGGRIV VGTTSLRL+E+A TEDG I+PWSG
Sbjct: 238 DDTDDHVMHEEIGHVDAVTAEKLNAVRARGGRIVCVGTTSLRLIESAATEDGKIHPWSGT 297
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E + Y HAI+ YRFYSYGD
Sbjct: 298 TGIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMRGAYTHAIAAGYRFYSYGD 357
Query: 353 TSLLFQK 359
SLLF+K
Sbjct: 358 ASLLFRK 364
>gi|190891762|ref|YP_001978304.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CIAT 652]
gi|238692548|sp|B3PZR1|QUEA_RHIE6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|190697041|gb|ACE91126.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CIAT 652]
Length = 373
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/373 (58%), Positives = 267/373 (71%), Gaps = 16/373 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNL-------SCP---LVISDHLVSDLP 50
M V FDFDLP RIALRP PRDSARL+VV+P+ S P +SDH V DLP
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESGPHAESVPHAESALSDHHVYDLP 60
Query: 51 AFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK 110
+FL + DA+VFN+TKVI AQL G+R +++S TLHMR+ P+ W +A+P K IK
Sbjct: 61 SFLRAGDALVFNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRIGPSRWKAFAKPGKRIK 119
Query: 111 KGDILHFFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI 166
+GD + F G+S L+ATV +K GE+ L F ++G L+ I+ VG IPLPPYI
Sbjct: 120 EGDRI-AFGHSGESCFLGALDATVEEKGEAGEVTLAFDLTGPALDEAIAAVGHIPLPPYI 178
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
A KRP D RD DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGT
Sbjct: 179 AAKRPEDERDRADYQTIYAREEGAVAAPTAGLHFTPDLFAALDKAGIERHFVTLHVGAGT 238
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F+PVK +DTDDH MH E G++ A A LN+VK+RGGRIV VGTTSLRL+E+A EDG I
Sbjct: 239 FLPVKADDTDDHKMHLESGYVSAEIAARLNAVKARGGRIVCVGTTSLRLIESAAGEDGKI 298
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
PW+G T IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E + Y+HAIS YR
Sbjct: 299 KPWAGATGIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMRAAYEHAISTGYR 358
Query: 347 FYSYGDTSLLFQK 359
FYSYGD SLLF+K
Sbjct: 359 FYSYGDASLLFRK 371
>gi|86357735|ref|YP_469627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli CFN 42]
gi|123511943|sp|Q2K8D6|QUEA_RHIEC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|86281837|gb|ABC90900.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis)protein [Rhizobium etli CFN 42]
Length = 361
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/363 (59%), Positives = 259/363 (71%), Gaps = 8/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV P+ L SDH V DLP+FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPDAESAL--SDHHVCDLPSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR+ P+ W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRIGPSRWKAFAKPGKRIKEGDRIAF-GH 116
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+S L+ATV +K GE+ L F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 117 SGESCMIGSLDATVEEKGEAGEVTLAFDLSGPVLDEAIAAVGHIPLPPYIAAKRPEDERD 176
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTD
Sbjct: 177 RADYQTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTD 236
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E G++ A LN+VK+RGGRIV VGTTSLRL+E+A E G I PW+G T IF
Sbjct: 237 DHKMHLESGYVSGEIAAGLNAVKARGGRIVCVGTTSLRLIESAAGESGEIKPWAGATGIF 296
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD SLL
Sbjct: 297 ITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYKHAISTGYRFYSYGDASLL 356
Query: 357 FQK 359
F+K
Sbjct: 357 FRK 359
>gi|222085994|ref|YP_002544526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium radiobacter K84]
gi|254764260|sp|B9JFA8|QUEA_AGRRK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221723442|gb|ACM26598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium radiobacter K84]
Length = 360
Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/366 (58%), Positives = 263/366 (71%), Gaps = 14/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV PN +V+SD + DL ++L DAIV
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPN--AEMVLSDRQIRDLSSYLRPGDAIV 58
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKVI AQL G+R RE +++S TLHMR +P+ W +A+P K IK GD +
Sbjct: 59 FNDTKVIPAQLEGIR-----HREGAPGQQVSATLHMRAAPDRWKAFAKPGKRIKIGDRIQ 113
Query: 117 FFSQD---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
F + L+A V +K GEI L F +SG L+ I+ VG IPLPPYIA KRP D
Sbjct: 114 FGHGENVCALGALDAVVEEKGEGGEITLRFDLSGPALDEAIAAVGHIPLPPYIAAKRPED 173
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT +L + L ++G++ +FVTLHVGAGTF+PVK +
Sbjct: 174 ERDRADYQTIYAREEGAVAAPTAGLHFTPSLFATLDAMGVERHFVTLHVGAGTFLPVKAD 233
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT+DH MH EIG +DA TA+ LN+VK+RGGRIV VGTTSLRLLE+A EDG I PWSG T
Sbjct: 234 DTEDHKMHFEIGHVDAATAEKLNAVKARGGRIVCVGTTSLRLLESAAAEDGTIKPWSGAT 293
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRF+ VD+LM+NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD
Sbjct: 294 GIFITPGYRFKTVDLLMTNFHLPRSTLFMLVSAFAGLDTMRAAYTHAIETGYRFYSYGDG 353
Query: 354 SLLFQK 359
SLL +K
Sbjct: 354 SLLHRK 359
>gi|241204662|ref|YP_002975758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858552|gb|ACS56219.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 361
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/363 (59%), Positives = 257/363 (70%), Gaps = 8/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV PN L SDH V DL +FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPNAESHL--SDHRVGDLTSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR PN W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRTGPNRWKAFAKPGKRIKQGDRISF-GH 116
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+S L+A V +K GE+ L+F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 117 SGESCFLGSLDAAVEEKGEAGEVTLLFDLSGPALDEAIAAVGHIPLPPYIAAKRPEDERD 176
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTD
Sbjct: 177 RADYQTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTD 236
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E G++ A A LN+V+ RGGRIV VGTTSLRL+E+A E G I PW+G T IF
Sbjct: 237 DHKMHLESGYVSAEIAARLNAVRERGGRIVCVGTTSLRLVESAAEEGGEIMPWAGATGIF 296
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRF+AVD+LM+NFHLP+STL MLV+AF G E Y+HAIS YRFYSYGD SLL
Sbjct: 297 ITPGYRFKAVDMLMTNFHLPRSTLFMLVAAFAGFETMHAAYKHAISTGYRFYSYGDASLL 356
Query: 357 FQK 359
F+K
Sbjct: 357 FRK 359
>gi|116252158|ref|YP_767996.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. viciae 3841]
gi|166216743|sp|Q1MGM3|QUEA_RHIL3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115256806|emb|CAK07896.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhizobium leguminosarum bv. viciae 3841]
Length = 361
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/363 (59%), Positives = 258/363 (71%), Gaps = 8/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+V+ PN L SDH V DL +FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVIDPNAENSL--SDHRVGDLTSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR SP+ W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRTSPSRWKAFAKPGKRIKQGDRISF-GH 116
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+S L+ATV +K GE+ L+F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 117 SGESCFLGSLDATVEEKGEAGEVTLLFDLSGPALDEAIAAVGHIPLPPYIAAKRPEDERD 176
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 177 RADYQTIYAREEGAVAAPTAGLHFTPGLFEALDRAGIERHFVTLHVGAGTFLPVKADDTA 236
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E G++ A A LN+V+ RGGRIV VGTTSLRL+E+A E G I PW+G T IF
Sbjct: 237 DHKMHLESGYVSAEIAARLNAVRERGGRIVCVGTTSLRLIESAAEESGEIMPWAGATGIF 296
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD SLL
Sbjct: 297 ITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFAGFETMHAAYKHAISTGYRFYSYGDASLL 356
Query: 357 FQK 359
F+K
Sbjct: 357 FRK 359
>gi|307317196|ref|ZP_07596637.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti AK83]
gi|306897284|gb|EFN28029.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti AK83]
Length = 360
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/366 (59%), Positives = 262/366 (71%), Gaps = 14/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ P V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD-GAP-VLEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL GVR+ R E +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRY----RGEDISTPVSLTLHMRVAPSRWKAFARPARRLKPGDRISF 114
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
G + LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D
Sbjct: 115 -GHGGNACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADD 173
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +
Sbjct: 174 ERDRTDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKAD 233
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT DH+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T
Sbjct: 234 DTADHVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGAT 293
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+
Sbjct: 294 GIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDS 353
Query: 354 SLLFQK 359
SLLF+K
Sbjct: 354 SLLFRK 359
>gi|15965338|ref|NP_385691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium meliloti 1021]
gi|21263893|sp|Q92PY5|QUEA_RHIME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|15074518|emb|CAC46164.1| Probable S-adenosylmethionine:tRNA
ribosyltransferase-isomerase(queuosine biosynthesis
protein QueA) [Sinorhizobium meliloti 1021]
Length = 360
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/366 (59%), Positives = 262/366 (71%), Gaps = 14/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ P V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD-GAP-VLEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL GVR+ R E +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRY----RGEDISTPVSLTLHMRVAPSRWKAFARPARRLKPGDRISF 114
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
G + LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D
Sbjct: 115 -GHGGSACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADD 173
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +
Sbjct: 174 ERDRTDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKAD 233
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT DH+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T
Sbjct: 234 DTADHVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGAT 293
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+
Sbjct: 294 GIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDS 353
Query: 354 SLLFQK 359
SLLF+K
Sbjct: 354 SLLFRK 359
>gi|307312710|ref|ZP_07592341.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti BL225C]
gi|306899435|gb|EFN30067.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti BL225C]
Length = 360
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/366 (59%), Positives = 261/366 (71%), Gaps = 14/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ P V D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD-GAP-VFEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL GVR+ R E +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRY----RGEDISTPVSLTLHMRVAPSRWKAFARPARRLKPGDRISF 114
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
G + LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D
Sbjct: 115 -GHGGSACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADD 173
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +
Sbjct: 174 ERDRTDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKAD 233
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT DH+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T
Sbjct: 234 DTADHVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGAT 293
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+
Sbjct: 294 GIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDS 353
Query: 354 SLLFQK 359
SLLF+K
Sbjct: 354 SLLFRK 359
>gi|150396485|ref|YP_001326952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium medicae WSM419]
gi|166218742|sp|A6U8Y7|QUEA_SINMW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150028000|gb|ABR60117.1| Queuosine biosynthesis protein [Sinorhizobium medicae WSM419]
Length = 360
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/365 (58%), Positives = 261/365 (71%), Gaps = 12/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP +ALRP PRDSAR++VV P V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPEDSVALRPASPRDSARMLVVRPGGEP--VLEDRGVLDLPSFLRQGDALV 58
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+TKVI AQL GVR+ HI+ +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRYRGEHIS---TPVSLTLHMRVAPDRWKAFARPARRLKPGDRVSF- 114
Query: 119 SQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
G + L+A V +K + GE+ L F +SG L+ I VG IPLPPYIA KR DA
Sbjct: 115 GHGGNACLLGSLDAMVEEKGDAGEVTLRFDLSGPSLDEAIMSVGHIPLPPYIASKRADDA 174
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
RD DYQT YA+ +G+VAAPTAGLHFT L + L GI+ +FVTLHVGAGTF+PVK +D
Sbjct: 175 RDRTDYQTVYAREEGAVAAPTAGLHFTDRLFAMLDEAGIERHFVTLHVGAGTFLPVKADD 234
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
TDDH+MH EIG +DA TA LN+V+ RGGR+V VGTTSLRL+E+A EDG I+ WSG T
Sbjct: 235 TDDHVMHEEIGHVDAVTAAKLNAVRERGGRVVCVGTTSLRLVESAAAEDGTIHAWSGATG 294
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGYRFRA +LM+NFHLPKSTL MLVSAF G+E + Y HAI+ YRFYSYGD+S
Sbjct: 295 IFITPGYRFRAAHMLMTNFHLPKSTLFMLVSAFAGLETMRDAYAHAIATGYRFYSYGDSS 354
Query: 355 LLFQK 359
LLF+K
Sbjct: 355 LLFRK 359
>gi|209549347|ref|YP_002281264.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|226713846|sp|B5ZPR8|QUEA_RHILW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209535103|gb|ACI55038.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 379
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/379 (57%), Positives = 260/379 (68%), Gaps = 22/379 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNL-------SCP---------LVISDH 44
M V FDFDLP RIALRP PRDSARL+VV+P+ S P SDH
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESRPHAESVPHAESRPHAESAFSDH 60
Query: 45 LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR 104
V DLP+FL + DA+VFN+TKVI AQL G+R +++S TLHMRV P+ W +A+
Sbjct: 61 RVGDLPSFLRAGDALVFNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRVGPSRWKAFAK 119
Query: 105 PSKVIKKGDILHFFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
P K IK+GD + F G+S L+ATV +K GE+ L F +SG L+ I+ VG I
Sbjct: 120 PGKRIKEGDRI-AFGHSGESCLLGSLDATVEEKGEAGEVTLAFDLSGPALDEAIAAVGHI 178
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPYIA KRP D RD DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTL
Sbjct: 179 PLPPYIAAKRPEDERDRADYQTIYAREEGAVAAPTAGLHFTPALFEALDRAGIERHFVTL 238
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVGAGTF+PVK +DT DH MH E G + A TA LN+VK+RGGRIV VGTTSLRL+E+A
Sbjct: 239 HVGAGTFLPVKADDTADHKMHLESGTVSAETAARLNAVKARGGRIVCVGTTSLRLIESAA 298
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
E G I WSG T IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HA
Sbjct: 299 EESGEIRGWSGATGIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYKHA 358
Query: 341 ISHAYRFYSYGDTSLLFQK 359
IS YRFYSYGD SLLF+K
Sbjct: 359 ISTGYRFYSYGDASLLFRK 377
>gi|254719159|ref|ZP_05180970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|265984153|ref|ZP_06096888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|306838150|ref|ZP_07471006.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NF 2653]
gi|264662745|gb|EEZ33006.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|306406740|gb|EFM62963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NF 2653]
Length = 363
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/360 (58%), Positives = 257/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPGQP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDGI+ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGIVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|17987172|ref|NP_539806.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. 16M]
gi|23501970|ref|NP_698097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis 1330]
gi|62290007|ref|YP_221800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 1 str. 9-941]
gi|82699935|ref|YP_414509.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis biovar Abortus 2308]
gi|148560477|ref|YP_001259016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ovis ATCC 25840]
gi|161619043|ref|YP_001592930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
canis ATCC 23365]
gi|163843359|ref|YP_001627763.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis ATCC 23445]
gi|189024248|ref|YP_001935016.1| Queuosine biosynthesis protein [Brucella abortus S19]
gi|237815515|ref|ZP_04594512.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus str. 2308 A]
gi|254689322|ref|ZP_05152576.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|254697454|ref|ZP_05159282.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|254701839|ref|ZP_05163667.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|254704384|ref|ZP_05166212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|254706720|ref|ZP_05168548.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|254710173|ref|ZP_05171984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|254714171|ref|ZP_05175982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|254717606|ref|ZP_05179417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|254730352|ref|ZP_05188930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|256031667|ref|ZP_05445281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|256044752|ref|ZP_05447656.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|256061179|ref|ZP_05451331.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|256113652|ref|ZP_05454463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|256159818|ref|ZP_05457555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|256255069|ref|ZP_05460605.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|256257569|ref|ZP_05463105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|256369519|ref|YP_003107029.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
microti CCM 4915]
gi|260546562|ref|ZP_05822301.1| queuosine biosynthesis protein [Brucella abortus NCTC 8038]
gi|260565646|ref|ZP_05836130.1| queuosine biosynthesis protein [Brucella melitensis bv. 1 str. 16M]
gi|260566370|ref|ZP_05836840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 4 str. 40]
gi|260754835|ref|ZP_05867183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|260758052|ref|ZP_05870400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|260761877|ref|ZP_05874220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|260883847|ref|ZP_05895461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|261219439|ref|ZP_05933720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|261222259|ref|ZP_05936540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|261314184|ref|ZP_05953381.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|261317727|ref|ZP_05956924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|261321935|ref|ZP_05961132.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|261325182|ref|ZP_05964379.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|261752398|ref|ZP_05996107.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|261755058|ref|ZP_05998767.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|265988758|ref|ZP_06101315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|265991173|ref|ZP_06103730.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|265995009|ref|ZP_06107566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|265998224|ref|ZP_06110781.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|294852432|ref|ZP_06793105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NVSL 07-0026]
gi|297248409|ref|ZP_06932127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 5 str. B3196]
gi|54038975|sp|P65949|QUEA_BRUSU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54041779|sp|P65948|QUEA_BRUME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|75496776|sp|Q57D45|QUEA_BRUAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207414|sp|Q2YPY7|QUEA_BRUA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216704|sp|A5VQL9|QUEA_BRUO2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038511|sp|A9M5A4|QUEA_BRUC2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038512|sp|B0CGP2|QUEA_BRUSI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238689369|sp|B2S5U5|QUEA_BRUA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|17982839|gb|AAL52070.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. 16M]
gi|23347918|gb|AAN30012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis 1330]
gi|62196139|gb|AAX74439.1| QueA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brucella abortus bv. 1 str. 9-941]
gi|82616036|emb|CAJ11072.1| Queuosine biosynthesis protein [Brucella melitensis biovar Abortus
2308]
gi|148371734|gb|ABQ61713.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ovis ATCC 25840]
gi|161335854|gb|ABX62159.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
canis ATCC 23365]
gi|163674082|gb|ABY38193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis ATCC 23445]
gi|189019820|gb|ACD72542.1| Queuosine biosynthesis protein [Brucella abortus S19]
gi|237788813|gb|EEP63024.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus str. 2308 A]
gi|255999681|gb|ACU48080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
microti CCM 4915]
gi|260095612|gb|EEW79489.1| queuosine biosynthesis protein [Brucella abortus NCTC 8038]
gi|260151714|gb|EEW86808.1| queuosine biosynthesis protein [Brucella melitensis bv. 1 str. 16M]
gi|260155888|gb|EEW90968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 4 str. 40]
gi|260668370|gb|EEX55310.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|260672309|gb|EEX59130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|260674943|gb|EEX61764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|260873375|gb|EEX80444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|260920843|gb|EEX87496.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|260924528|gb|EEX91096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|261294625|gb|EEX98121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|261296950|gb|EEY00447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|261301162|gb|EEY04659.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|261303210|gb|EEY06707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|261742151|gb|EEY30077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|261744811|gb|EEY32737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|262552692|gb|EEZ08682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|262766122|gb|EEZ11911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|263001957|gb|EEZ14532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|264660955|gb|EEZ31216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|294821021|gb|EFG38020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NVSL 07-0026]
gi|297175578|gb|EFH34925.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 5 str. B3196]
Length = 363
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/360 (58%), Positives = 258/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPGEP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|110633758|ref|YP_673966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mesorhizobium sp. BNC1]
gi|123057977|sp|Q11IH4|QUEA_MESSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110284742|gb|ABG62801.1| Queuosine biosynthesis protein [Chelativorans sp. BNC1]
Length = 358
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/366 (57%), Positives = 261/366 (71%), Gaps = 17/366 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSAR++VV P + D +V DLP FL DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPASPRDSARMLVVRPGKP----LEDCIVRDLPQFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI A+L+G+R RR + +I TLHMR P+ W + +P+K + G+ + F
Sbjct: 57 FNDTKVIPARLSGIR-----RRGETVAQIEATLHMRAGPDRWKAFLKPAKRVAVGERIQF 111
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
DG+S L+ATV +K GE LLVF SG L+ I+ G +PLPPYIA KRP D
Sbjct: 112 -GHDGESCFLGSLDATVAEKGEGGEALLVFDFSGPVLDEAIAAAGHVPLPPYIASKRPDD 170
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT +L S L +IG++ +FVTLHVGAGTF+PVK E
Sbjct: 171 ERDRADYQTIYAREEGAVAAPTAGLHFTPDLFSALDTIGVERHFVTLHVGAGTFLPVKAE 230
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT+ H MH+E G +D TA ALN+V++RGG I++VGTTSLRLLE+A G++ WSG T
Sbjct: 231 DTEAHRMHAEWGEVDGMTADALNAVRARGGCIIAVGTTSLRLLESAAEPSGLLKAWSGET 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPGYRFRA+DILM+NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD+
Sbjct: 291 DIFITPGYRFRAIDILMTNFHLPRSTLFMLVSAFSGLETMKSAYSHAIDQGYRFYSYGDS 350
Query: 354 SLLFQK 359
SLLF++
Sbjct: 351 SLLFRE 356
>gi|306841819|ref|ZP_07474502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO2]
gi|306288100|gb|EFM59494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO2]
Length = 363
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/360 (58%), Positives = 256/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPGQP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMR--ERTGSISQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDGI+ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGIVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|225627567|ref|ZP_03785604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti str. Cudo]
gi|260168801|ref|ZP_05755612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. F5/99]
gi|261758283|ref|ZP_06001992.1| queuosine biosynthesis protein [Brucella sp. F5/99]
gi|225617572|gb|EEH14617.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti str. Cudo]
gi|261738267|gb|EEY26263.1| queuosine biosynthesis protein [Brucella sp. F5/99]
Length = 363
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/360 (58%), Positives = 257/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RI LRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERITLRPVEPRDHAKLLHVRPGEP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|254693807|ref|ZP_05155635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
gi|261214086|ref|ZP_05928367.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
gi|260915693|gb|EEX82554.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
Length = 363
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/360 (58%), Positives = 257/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPGEP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATYIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|306843960|ref|ZP_07476555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO1]
gi|306275715|gb|EFM57439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO1]
Length = 363
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/360 (58%), Positives = 257/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ + P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHIRPGQP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+A+ EDGI+ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESASGEDGIVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADDYRFYSYGDASLL 353
>gi|153009507|ref|YP_001370722.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum anthropi ATCC 49188]
gi|166216733|sp|A6X0Y9|QUEA_OCHA4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151561395|gb|ABS14893.1| Queuosine biosynthesis protein [Ochrobactrum anthropi ATCC 49188]
Length = 363
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/360 (57%), Positives = 253/360 (70%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD ARL+ V P D V +LP L DA+V
Sbjct: 1 MRVDLFDFDLPEESIALRPAEPRDHARLLRVRPGQP----FEDRQVFELPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMR P+ W + RP K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERDGNI--SQVSATLHMRTGPDRWKAFLRPGKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KR D RD
Sbjct: 114 SGSSCFLGTLDATVAEKGDAGEALLVFDLSGAMLDEAIASVGHIPLPPYIASKRAEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + G++ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKAKGVEEHFVTLHVGAGTFLPVKADDTT 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSEIG++ TA ALN+V RGG+I+ VGTTSLRL+E+A EDGII PW+G T+IF
Sbjct: 234 DHKMHSEIGYVSQRTADALNAVHERGGKIICVGTTSLRLIESAAGEDGIIRPWAGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FRAVD+LM+NFHLP+STL MLVSAF G E Y+HAIS+ YRFYSYGD SLL
Sbjct: 294 ITPGYKFRAVDLLMTNFHLPRSTLFMLVSAFSGFETMHAAYEHAISNGYRFYSYGDASLL 353
>gi|225852594|ref|YP_002732827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis ATCC 23457]
gi|256263912|ref|ZP_05466444.1| queuosine biosynthesis protein [Brucella melitensis bv. 2 str.
63/9]
gi|254764268|sp|C0RJ65|QUEA_BRUMB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|225640959|gb|ACO00873.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis ATCC 23457]
gi|263094045|gb|EEZ17979.1| queuosine biosynthesis protein [Brucella melitensis bv. 2 str.
63/9]
gi|326409115|gb|ADZ66180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis M28]
gi|326538822|gb|ADZ87037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis M5-90]
Length = 363
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/360 (58%), Positives = 257/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DL L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPGEP----FEDRHVYDLFDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|239831893|ref|ZP_04680222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum intermedium LMG 3301]
gi|239824160|gb|EEQ95728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum intermedium LMG 3301]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/360 (57%), Positives = 254/360 (70%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP+ PRD ARL+ V P D V +LP L+ DA+V
Sbjct: 1 MRVDLFDFDLPEESIALRPIEPRDHARLLRVRPGQP----FEDRQVFELPDLLHPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMR + W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERDGNI--SQVSATLHMRSGADRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KR D RD
Sbjct: 114 SGSSCFLGTLDATVAEKGDAGEALLVFDLSGAMLDEAIASVGHIPLPPYIASKRAEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT LL ++ + G++ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPELLEKIKAKGVEEHFVTLHVGAGTFLPVKADDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSEIG + TA ALN+V RGGRIV VGTTSLRL+E+A EDG+I PWSG T+IF
Sbjct: 234 DHKMHSEIGHVSQRTADALNAVHERGGRIVCVGTTSLRLIESAAGEDGVIRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FRAVD+LM+NFHLP+STL MLVSAF G++ + Y HAIS+ YRFYSYGD SLL
Sbjct: 294 ITPGYKFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMRAAYDHAISNGYRFYSYGDGSLL 353
>gi|114707080|ref|ZP_01439979.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Fulvimarina
pelagi HTCC2506]
gi|114537630|gb|EAU40755.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Fulvimarina
pelagi HTCC2506]
Length = 358
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/359 (57%), Positives = 257/359 (71%), Gaps = 9/359 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LPP RIALRP PR+SA L+ V +L+ +SD ++DLPA + D +V
Sbjct: 1 MRVDLFDFELPPERIALRPAEPRESAMLLGV--SLTG---LSDLRIADLPALIEPGDVLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL G R +R + ++ TLHMR+SP SW+ + RP K IK GD L F
Sbjct: 56 FNDTKVIPAQLFGTRVREDSRDGEGVAQVEATLHMRLSPGSWAAFVRPGKRIKVGDTLVF 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
S D ++ L A V + GE L F SG +L+ I+ VG +PLPPYIA +R DARD+
Sbjct: 116 ASDDAET-LAAEVTARGEGGEATLTFEHSGPDLDAAIAAVGHVPLPPYIAARRGDDARDW 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ G+VAAPTAGLHFT NLL +L G+ F+TLHVGAGTF+PVK +DT+D
Sbjct: 175 TDYQTIYAREAGAVAAPTAGLHFTDNLLEKLHERGVATEFLTLHVGAGTFLPVKADDTED 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG IDA A LN+ +S GGRI+SVGTTSLRLLE+A +DG I P++G T+IFI
Sbjct: 235 HRMHAEIGTIDAAMADRLNAARSAGGRIISVGTTSLRLLESAAGDDGRIAPFTGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
TPGYRF+AVD LM+NFHLP+STL MLVSAFCG+E ++ Y+HAI + YRFYSYGD LL
Sbjct: 295 TPGYRFKAVDRLMTNFHLPRSTLFMLVSAFCGLERMRRAYEHAIENGYRFYSYGDACLL 353
>gi|163760249|ref|ZP_02167332.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hoeflea
phototrophica DFL-43]
gi|162282648|gb|EDQ32936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hoeflea
phototrophica DFL-43]
Length = 359
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/364 (58%), Positives = 254/364 (69%), Gaps = 15/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IALRP PRDSAR++ V P+ +SD +V DL A L DA+V
Sbjct: 1 MRVDLFDFHLPDESIALRPASPRDSARMLCVAPDGG----LSDAIVRDLAAQLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEI--SCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI AQL G R NR + ++ S TLHMR P+ W + RP K IK GD L F
Sbjct: 57 FNDTRVIPAQLEGFR----NRGDNQVRVSATLHMRSGPDRWKAFVRPGKRIKPGDRLSF- 111
Query: 119 SQDG----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
DG Q L+AT ++ GEI L+F +SG L+ I G IPLPPYIA KR DA
Sbjct: 112 GGDGSACLQGVLDATAGERGEGGEIELIFDLSGPALDEAIMATGHIPLPPYIASKRGEDA 171
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+D DYQT YA+ G+VAAPTAGLHFT L + L + GI +FVTLHVGAGTF+PVK +D
Sbjct: 172 QDRKDYQTIYAREDGAVAAPTAGLHFTDALFASLDARGIVRHFVTLHVGAGTFLPVKADD 231
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
T +H MHSEIG + A TA ALN V++ GGRIVSVGTTSLRLLE+A E+G I PWSG T+
Sbjct: 232 TAEHRMHSEIGHVSAETAAALNQVRASGGRIVSVGTTSLRLLESAADENGTIQPWSGPTD 291
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG+E + Y HAI YRFYSYGD+S
Sbjct: 292 IFITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLETMRAAYDHAIETGYRFYSYGDSS 351
Query: 355 LLFQ 358
LLF+
Sbjct: 352 LLFR 355
>gi|254469478|ref|ZP_05082883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudovibrio sp. JE062]
gi|211961313|gb|EEA96508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudovibrio sp. JE062]
Length = 375
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/362 (55%), Positives = 256/362 (70%), Gaps = 7/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FDFDLPP IALRP PRDS+RL+VV P+ +++D V LP L DA+V
Sbjct: 15 MLVDDFDFDLPPENIALRPAVPRDSSRLLVVRPD--GEQLLTDDQVLSLPDLLEPGDALV 72
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FS 119
FN+TKVI AQL G R + ++ TLH R S W + RP+K +K GD + F F
Sbjct: 73 FNDTKVIPAQLLGFRTR--DGVTAKVGVTLHQRASAKEWRAFVRPAKKLKVGDTVRFAFD 130
Query: 120 QDGQ--SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
++G+ + L A V +K G+IL F S +L+ I+ VG IPLPPYIA KR D +D
Sbjct: 131 EEGKDAAELSAVVTEKSEAGDILFEFDRSAGDLDAAIAQVGHIPLPPYIAAKRAEDDQDR 190
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YAK +G+VAAPTAGLHFT L + L GI+ +FVTLHVGAGTF+PVK + T+D
Sbjct: 191 KDYQTIYAKHEGAVAAPTAGLHFTDRLFAALEERGIEKHFVTLHVGAGTFLPVKADKTED 250
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E G I TA ALN+V++RG +IVSVGTTSLR+LE++ TEDG+INP S T+IFI
Sbjct: 251 HKMHFEYGEISEETAAALNAVRARGNKIVSVGTTSLRILESSVTEDGVINPISQSTDIFI 310
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+F+A+D LM+NFHLP+STL MLVSA G+EE + Y+HAIS YRFYSYGD+SLLF
Sbjct: 311 TPGYQFKAIDALMTNFHLPRSTLFMLVSALSGMEEMRGAYEHAISSGYRFYSYGDSSLLF 370
Query: 358 QK 359
+K
Sbjct: 371 KK 372
>gi|218531243|ref|YP_002422059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium chloromethanicum CM4]
gi|254764283|sp|B7KTS1|QUEA_METC4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218523546|gb|ACK84131.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacterium chloromethanicum CM4]
Length = 368
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 257/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P PL +D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG--DPL--ADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRH-RAGGSGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KRP DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRPTDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|163852486|ref|YP_001640529.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium extorquens PA1]
gi|226713844|sp|A9VX03|QUEA_METEP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|163664091|gb|ABY31458.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium extorquens PA1]
Length = 368
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 257/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P PL +D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG--DPL--ADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRH-RAGGSGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KRP DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRPTDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+ H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 EAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|188582509|ref|YP_001925954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium populi BJ001]
gi|238692892|sp|B1ZIL2|QUEA_METPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|179346007|gb|ACB81419.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium populi BJ001]
Length = 366
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/369 (53%), Positives = 257/369 (69%), Gaps = 14/369 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P + ++D V DLPA LN DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPGET----LADRGVRDLPALLNPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F +
Sbjct: 57 FNDTRVIPARLSGIRH-RAGGTGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGGE 115
Query: 121 DGQ---------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
S L+ATV ++ GEILL F ++G L+ I+ +G +PLPPYIA KR
Sbjct: 116 GANQGASEVCVLSGLDATVEERGEGGEILLRFDLAGPALDEAIAGLGALPLPPYIAGKRA 175
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
DARD DYQT YA+ G+VAAPTAGLHF+ LL + + GI+ VTLHVGAGTF+PVK
Sbjct: 176 TDARDTTDYQTVYAREPGAVAAPTAGLHFSDALLDGIDAAGIERIHVTLHVGAGTFLPVK 235
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+DT+ H MH+EIG +D TA+ LN+V++RG RIV+VGTT+LRLLE+AT DG + P+SG
Sbjct: 236 ADDTEAHRMHAEIGILDTATAERLNAVRARGNRIVAVGTTALRLLESATDPDGTVRPFSG 295
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI+ YRFYSYG
Sbjct: 296 ATDIFITPGYRFRAVDALVTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIASGYRFYSYG 355
Query: 352 DTSLLFQKR 360
D SLLF +R
Sbjct: 356 DASLLFPER 364
>gi|240139823|ref|YP_002964300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
AM1]
gi|240009797|gb|ACS41023.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
AM1]
Length = 368
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 256/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P PL +D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG--DPL--ADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRH-RAGGSGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KR DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRATDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|13470903|ref|NP_102472.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mesorhizobium loti MAFF303099]
gi|21263904|sp|Q98M55|QUEA_RHILO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|14021646|dbj|BAB48258.1| S-adenosylmethionine tRNA ribosyltransferase [Mesorhizobium loti
MAFF303099]
Length = 361
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/362 (56%), Positives = 255/362 (70%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSA+++VV + + D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFELPEERIALRPAEPRDSAKMLVVKSGEA----LDDRKVGDLPSLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + ++ TLHMRV+P+ W + RP K I GD +HF
Sbjct: 57 FNDTKVIPAQLKGIR--RRGEAQAQVEATLHMRVAPDRWLAFMRPGKRIAAGDRIHF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG S +L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 114 DGNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT L + L + G++ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RADYQTIYAREEGAVAAPTAGLHFTPELFAALDAKGVERHFVTLHVGAGTFLPVKADDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+ K+RGGRI++VGTTSLRLLE+A EDG + WSG T+IF
Sbjct: 234 DHKMHAEIGSVSRETADALNAAKARGGRIIAVGTTSLRLLESAAREDGTVPAWSGPTDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR D+LM+NFHLP+STL MLVSAF G++ Y HAI++ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLDTMGAAYAHAIANRYRFYSYGDASLL 353
Query: 357 FQ 358
++
Sbjct: 354 YR 355
>gi|16125834|ref|NP_420398.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus CB15]
gi|221234595|ref|YP_002517031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus NA1000]
gi|21263914|sp|Q9A7Y2|QUEA_CAUCR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764271|sp|B8GVF3|QUEA_CAUCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13422980|gb|AAK23566.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Caulobacter
crescentus CB15]
gi|220963767|gb|ACL95123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus NA1000]
Length = 366
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/366 (54%), Positives = 257/366 (70%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIALRP PRDSAR +VV P + ++DH+VSDLP FL DA+V
Sbjct: 1 MRLSDFDFDLPEDRIALRPAEPRDSARFLVVRPGQA----VADHIVSDLPDFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L+G+R + TLH R++P+ WS + RP K +K GD +
Sbjct: 57 FNDTRVIPARLSGLREGRTTGGADGTPVAVEATLHRRLAPDRWSAFMRPGKRLKVGDRVA 116
Query: 117 FFSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F +G+ RL+A + +K + GE++L F +SG +L+ I+ G +PLPPYIA KR
Sbjct: 117 FGGHEGRVGDLGRLDAVIAEKHDGGEVVLAFDLSGPDLDVGIAQHGDMPLPPYIAAKRGE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFT LL RL + G+ ++FVTLHVGAGTF+PVK
Sbjct: 177 DERDRADYQTVYAREDGSVAAPTAGLHFTPQLLERLKAKGVSLHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
++ +H MH+E G + A ALN+ ++ GGRIV VGTTSLRLLE+AT EDGI+ P++
Sbjct: 237 DEVSEHRMHAEYGQVTQEIADALNAARAAGGRIVCVGTTSLRLLESATGEDGIVRPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFR D+LM+NFHLPKSTL MLVSAF G E + Y+HAI+ YRFYSYGD
Sbjct: 297 TAIFITPGYRFRTADVLMTNFHLPKSTLFMLVSAFAGTEAMRAAYEHAIATGYRFYSYGD 356
Query: 353 TSLLFQ 358
+SLLF+
Sbjct: 357 SSLLFK 362
>gi|254562239|ref|YP_003069334.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium extorquens DM4]
gi|254269517|emb|CAX25483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
DM4]
Length = 368
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/364 (54%), Positives = 256/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P PL +D V DLP+ L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG--DPL--ADRGVRDLPSLLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRH-RAGGSGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KR DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRATDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|319783733|ref|YP_004143209.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169621|gb|ADV13159.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 362
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/362 (55%), Positives = 253/362 (69%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSA++++V P + D V DLP+ L++ D +V
Sbjct: 1 MRVDLFDFELPEERIALRPAQPRDSAKMLLVKPGEE----LEDRTVGDLPSLLSAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R ++ TLHMR++P+ W + RP K I GD +HF
Sbjct: 57 FNDTKVIPAQLKGIR--RRGEATAQVEATLHMRMAPDRWLAFMRPGKRIAAGDRIHF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG S +L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 114 DGNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA +G+VAAPTAGLHFT L + L + G++ FVTLHVGAGTF+PVK +DT
Sbjct: 174 RADYQTIYASEEGAVAAPTAGLHFTPELFAALDAKGVERRFVTLHVGAGTFLPVKADDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+E G + TA ALN+ ++RGGRIV+VGTTSLRLLE+A EDG + WSG T+IF
Sbjct: 234 DHKMHAETGSVSEATADALNAARARGGRIVAVGTTSLRLLESAAREDGTLAAWSGPTDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR D+LM+NFHLP+STL MLVSAF G++ + Y HAI++ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIANRYRFYSYGDASLL 353
Query: 357 FQ 358
F+
Sbjct: 354 FR 355
>gi|304391768|ref|ZP_07373710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ahrensia
sp. R2A130]
gi|303295997|gb|EFL90355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ahrensia
sp. R2A130]
Length = 371
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/360 (53%), Positives = 254/360 (70%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF+LP RIALRPV PRDSA+L+ ++ L +D +V++L L+ DA+V
Sbjct: 1 MKIDAFDFELPEERIALRPVNPRDSAKLLTINAGRDGEL--ADRVVNELAELLSPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL G+R RRE + TLHM +P++W + R +K +K G+++ F
Sbjct: 59 FNDTKVIPAQLEGIR-----RREDVEARVGLTLHMEEAPDTWRAFVRGAKKLKLGELVEF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G + A V++K + GEI+ F+ SG L ++ G IPLPPYIA KR D RD
Sbjct: 114 ----GGADFTAEVLEKGDAGEIVFRFNRSGQALRDALAKRGHIPLPPYIALKRGEDERDR 169
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L+++L + GI+ +FVTLHVGAGTF+PVKV+DTDD
Sbjct: 170 SDYQTIYARDEGAVAAPTAGLHFTDELMAKLDARGIERHFVTLHVGAGTFLPVKVDDTDD 229
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MHSE G + TA AL V+SRGG++V+VGTTSLRLLE+A E G + W G T+IFI
Sbjct: 230 HVMHSERGIVTQETADALARVRSRGGKVVAVGTTSLRLLESAAQETGKVTAWQGATDIFI 289
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F AVD LM+NFHLPKSTL MLVSAF G++ ++ Y+HAI + YRFYSYGD+SLLF
Sbjct: 290 QPGYNFLAVDALMTNFHLPKSTLFMLVSAFAGLDTMRRAYEHAIENQYRFYSYGDSSLLF 349
>gi|170743609|ref|YP_001772264.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium sp. 4-46]
gi|238688051|sp|B0U9V5|QUEA_METS4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|168197883|gb|ACA19830.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium sp. 4-46]
Length = 362
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/363 (53%), Positives = 251/363 (69%), Gaps = 10/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRPV PRD+ARL+ V P +++ V DLPA L D +V
Sbjct: 1 MRVDLFDFDLPEALIALRPVEPRDAARLLRVAPGHP----LAEARVRDLPALLRPGDCLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS- 119
FN+T+VI A+L G+R + + LH R P+ W +ARP K +++GD + F S
Sbjct: 57 FNDTRVIPARLRGLR-ARPDGSSVRVEAMLHRREGPDCWRAFARPGKRLREGDRIRFGSG 115
Query: 120 QDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+DG + L+ATV + GEI L F ++G L+ ++ +G +PLPPYIA +RP DAR
Sbjct: 116 RDGSACDLGHLDATVAARGEEGEITLAFDLAGAFLDEAVARLGELPLPPYIAGRRPADAR 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHFT +LL+RL + GI +TLHVGAGTF+PVK +DT
Sbjct: 176 DAADYQTVYAREPGAVAAPTAGLHFTPDLLARLGAAGIGEARLTLHVGAGTFLPVKAQDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+ H MH+E G I TA LN ++ GGRIV+VGTTSLRLLE+A DG I P++G T+I
Sbjct: 236 EAHRMHAETGEITPGTAARLNRARAEGGRIVAVGTTSLRLLESAAEPDGTIRPFAGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAF G+E + Y HA++ YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFAGLETMRAAYAHAVAQGYRFYSYGDASL 355
Query: 356 LFQ 358
LF+
Sbjct: 356 LFR 358
>gi|90419655|ref|ZP_01227565.1| S-adenosylmethionine, tRNA ribosyltransferase-isomerase
[Aurantimonas manganoxydans SI85-9A1]
gi|90336592|gb|EAS50333.1| S-adenosylmethionine, tRNA ribosyltransferase-isomerase
[Aurantimonas manganoxydans SI85-9A1]
Length = 363
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/368 (55%), Positives = 248/368 (67%), Gaps = 22/368 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LPP RIALRPV PR+SARL+ V P ++D V DLP+ L D +V
Sbjct: 1 MRVDLFDFELPPERIALRPVSPRESARLLCVDPARG----LADQTVGDLPSLLTPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRRE--------KEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+TKVI AQL G+R RR +IS TLHMR +P+ W + RP K +K G
Sbjct: 57 FNDTKVIPAQLEGLR-----RRPGSVDGEGVAQISATLHMREAPDRWLAFVRPGKRVKVG 111
Query: 113 DILHFFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
D + F G + LEATV + GE L F +SG L+ I+ VG IPLPPYIA
Sbjct: 112 DRIAF-GHGGNACLAGTLEATVETRGEGGEASLRFDLSGPALDEAIAAVGHIPLPPYIAS 170
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
KRP D++D DYQT YA+ G+VAAPTAGLHFT +L +RL + I ++TLHVGAGTF+
Sbjct: 171 KRPDDSQDRSDYQTVYAREDGAVAAPTAGLHFTPDLFARLAARDIAAEYLTLHVGAGTFL 230
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PVK EDT DH MHSEIG + +A+ LN+ + G RIVSVGTTSLRLLE+A DG I P
Sbjct: 231 PVKAEDTADHRMHSEIGRVTEESAERLNAARREGRRIVSVGTTSLRLLESAADADGTIRP 290
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+SG T+IFITPGYRFRAVD LM+NFHLP+STL MLVSAF GI+ K Y HAI + YRFY
Sbjct: 291 FSGPTDIFITPGYRFRAVDRLMTNFHLPRSTLFMLVSAFSGIDTMKSAYAHAIGNEYRFY 350
Query: 349 SYGDTSLL 356
SYGD LL
Sbjct: 351 SYGDACLL 358
>gi|307947103|ref|ZP_07662438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseibium
sp. TrichSKD4]
gi|307770767|gb|EFO29993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseibium
sp. TrichSKD4]
Length = 357
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/360 (55%), Positives = 252/360 (70%), Gaps = 6/360 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP RIALRP PRDSAR++VV P + L SD V DLP L DA+V
Sbjct: 1 MRVEDFDFVLPNERIALRPARPRDSARMLVVQPGDTAEL--SDFGVRDLPLLLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G R E IS TLH+R + + W + RP K ++ GD+L F +
Sbjct: 59 FNDTKVIPAQLEGKRVR--GDIEARISATLHLRAAADRWKAFVRPGKKVQLGDVLVF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G L A +K G++LLVF S EL+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 EGGVTLTARAEEKSPAGDVLLVFDRSAAELDEAIASVGHIPLPPYIAQKRGEDEQDRSDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT +LL+ L + GI+ + VTLHVGAGTF+PVKV+DTDDH M
Sbjct: 175 QTMFAEKDGAVAAPTAGLHFTPDLLAALDARGIEQHRVTLHVGAGTFLPVKVDDTDDHQM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK+RG ++VSVGTTSLR+LE+A G + ++G T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALQAVKARGNKVVSVGTTSLRILESAAQGSGGLQAFAGETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y FRA+D LM+NFHLP+STL MLVSA G++ K+ Y HAI H YRFYSYGD SLLF ++
Sbjct: 295 YEFRAIDALMTNFHLPRSTLFMLVSALSGLDVMKRAYTHAIDHEYRFYSYGDASLLFPQK 354
>gi|220922620|ref|YP_002497922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium nodulans ORS 2060]
gi|219947227|gb|ACL57619.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacterium nodulans ORS 2060]
Length = 364
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/363 (53%), Positives = 252/363 (69%), Gaps = 10/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSARLM V P +D V DLP L D +V
Sbjct: 4 MRVDLFDFDLPEALIALRPAVPRDSARLMRVRPGEPP----ADAQVRDLPDLLRPGDCLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS- 119
FN+TKVI A+L G+R + + LH R + + W +ARP+K +++GD + F +
Sbjct: 60 FNDTKVIPARLRGLR-ARPDGTVVRVEAMLHHREAADCWRAFARPAKRLREGDRIRFGAG 118
Query: 120 QDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
Q+G + L+ATV+ + GEI L F ++G L+ + +G +PLPPYIA +RP DAR
Sbjct: 119 QEGAACDLGHLDATVVARGEGGEITLAFDLAGAVLDEAVVRLGELPLPPYIAGRRPADAR 178
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHFT +LL+RL + GI VTLHVGAGTF+PVK EDT
Sbjct: 179 DAADYQTVYARAPGAVAAPTAGLHFTPDLLARLDAAGIGQARVTLHVGAGTFLPVKAEDT 238
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MH+E G I TA ALN V++ GGRIV+VGTT+LRL+E+A DG + P++G T+I
Sbjct: 239 ADHRMHAETGEITPETAAALNRVRAAGGRIVAVGTTALRLVESAAAPDGTLRPFAGETDI 298
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ ++ Y AI+ YRFYSYGD+SL
Sbjct: 299 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFAGLDTMREAYAAAIARGYRFYSYGDSSL 358
Query: 356 LFQ 358
LF+
Sbjct: 359 LFR 361
>gi|295689992|ref|YP_003593685.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Caulobacter
segnis ATCC 21756]
gi|295431895|gb|ADG11067.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Caulobacter
segnis ATCC 21756]
Length = 368
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/366 (54%), Positives = 256/366 (69%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIALRP PRD+ARL+VV P ++DH+V +LP FL DA+V
Sbjct: 1 MHLSDFDFDLPEDRIALRPAEPRDAARLLVVRPGQP----LADHVVRELPDFLQPGDAMV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L+G+R + TLH R++P+ WS + RP K +K GD +
Sbjct: 57 FNDTRVIPARLSGLREGRTTGGADGTPVAVEATLHRRLTPDRWSAFMRPGKRLKVGDRVA 116
Query: 117 FFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F +D ++ RL+ATV +K GE++L F +SG +L+ I+ G +PLPPYIA KR
Sbjct: 117 FGGRDDRACALDRLDATVAEKHEGGEVVLAFDLSGPDLDVGIARHGDMPLPPYIAAKRGE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFT +LL L + G+ +FVTLHVGAGTF+PVK
Sbjct: 177 DERDRADYQTVYAREDGSVAAPTAGLHFTPSLLEALKAKGVSTHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H MH+E G + A ALN+ ++ GGRI+ VGTTSLRLLE+AT EDG++ P++
Sbjct: 237 DDVSEHKMHAEYGQVTREVADALNAARAAGGRIICVGTTSLRLLESATGEDGVVKPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFRA DILM+NFHLPKSTL MLVSAF G E + Y+HAIS YRFYSYGD
Sbjct: 297 TAIFITPGYRFRAADILMTNFHLPKSTLFMLVSAFAGRETMRAAYEHAISTGYRFYSYGD 356
Query: 353 TSLLFQ 358
SLLF+
Sbjct: 357 GSLLFR 362
>gi|302383465|ref|YP_003819288.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Brevundimonas subvibrioides ATCC 15264]
gi|302194093|gb|ADL01665.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Brevundimonas subvibrioides ATCC 15264]
Length = 356
Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/367 (55%), Positives = 251/367 (68%), Gaps = 19/367 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP RIALRP PRDSARL+VV ++DH++ DLPAFL DA+V
Sbjct: 1 MKTADFDFDLPEDRIALRPAEPRDSARLLVVQDG-----ALADHVIRDLPAFLRPGDALV 55
Query: 61 FNNTKVITAQLNGVRFCH---INRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+T+VI A+L+GVR + E E + TLH R +P++WS + +P K I+
Sbjct: 56 FNDTRVIPARLSGVRQRPNPVVGSPEGETLTVPVEATLHHRDTPDTWSAFMKPGKRIRPD 115
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
D + F S L ATVI K + G + L F +SG L+ I VG +PLPPYIA KRP
Sbjct: 116 DRIVFDS------LSATVIAKSDDGLVTLRFDVSGPALDDAIRAVGVMPLPPYIAAKRPE 169
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD +DYQT +A GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK
Sbjct: 170 DDRDRLDYQTVFATHDGSVAAPTAGLHFTPALLDAIRAKGVTTHAVTLHVGAGTFLPVKA 229
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+DT DH MHSE G + TA ALN+V + GGRIV VGTTSLRLLE+ATT DG+I P+ G
Sbjct: 230 DDTADHRMHSEWGTVSGETAAALNAVHANGGRIVCVGTTSLRLLESATTPDGVIQPFHGD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGY FRA D+L++NFHLPKSTL MLVSAF G++ K Y HA++ YRFYSYGD
Sbjct: 290 TAIFITPGYAFRAADVLVTNFHLPKSTLFMLVSAFAGLDTMKTAYAHAVADGYRFYSYGD 349
Query: 353 TSLLFQK 359
SLLF++
Sbjct: 350 GSLLFRQ 356
>gi|254418229|ref|ZP_05031953.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas sp. BAL3]
gi|196184406|gb|EDX79382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas sp. BAL3]
Length = 372
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/365 (56%), Positives = 245/365 (67%), Gaps = 12/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP RIALRP PRDSARL+VV + D ++ DLP FL DA+V
Sbjct: 7 MKTADFDFDLPEDRIALRPADPRDSARLLVVKDG-----ALDDRIIRDLPDFLRPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L+GVR E + TLH R +P+ WS + +P K IK GD + F
Sbjct: 62 FNDTRVIPARLSGVRTRPGPEGETLTVAVEATLHHRDAPDVWSAFMKPGKRIKPGDRIRF 121
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + RL+ATV K + G I L F +SG L+ I VG +PLPPYIA KRP D
Sbjct: 122 GQEADAACDLGRLDATVTAKGDDGLITLKFDLSGPALDDAIRDVGVMPLPPYIAAKRPED 181
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT +A+ GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK +
Sbjct: 182 DRDRSDYQTVFAEHDGSVAAPTAGLHFTPALLDAIRARGVSTHAVTLHVGAGTFLPVKAD 241
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D DH MHSE G + TA ALN+V + GGRIV VGTTSLRLLE+ATTE G I P+ G T
Sbjct: 242 DLADHRMHSEWGEVSPETADALNAVHAAGGRIVCVGTTSLRLLESATTEAGEIRPFHGDT 301
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G K Y HAI+ YRFYSYGD
Sbjct: 302 AIFITPGYRFRAVDVLMTNFHLPKSTLFMLVSAFAGRAAMKTAYAHAIADGYRFYSYGDG 361
Query: 354 SLLFQ 358
SLLF+
Sbjct: 362 SLLFR 366
>gi|158423932|ref|YP_001525224.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azorhizobium caulinodans ORS 571]
gi|172047956|sp|A8I5Q2|QUEA_AZOC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|158330821|dbj|BAF88306.1| S-adenosylmethionine [Azorhizobium caulinodans ORS 571]
Length = 354
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/356 (53%), Positives = 249/356 (69%), Gaps = 4/356 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PR+SARL+ V P + L D ++DLP L DA+V
Sbjct: 1 MRVDAFDFDLPPERIALRPAEPRESARLLRVRPGAAPEL--EDRTIADLPDLLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L+G R I TL R+S ++W+ +A+P+K + G+ + F
Sbjct: 59 VNDTKVIPARLDGTR-TRAGGSTVAIEATLIRRLSGSAWAAFAKPAKRLAVGETVVFAGA 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + LEA V+DK +GE+ F++SG EL+ I +G +PLPPYIA KRP D RD DY
Sbjct: 118 SGGT-LEARVLDKLESGEVHFAFALSGPELDAAIDAIGHMPLPPYIAAKRPEDDRDRTDY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q +A+++GSVAAPTA LHFT +LL+++ + G+ Y VTLHVGAGTF+PVK EDT DH M
Sbjct: 177 QPVFARVEGSVAAPTASLHFTPDLLAKIAARGVSRYTVTLHVGAGTFLPVKAEDTTDHQM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA LN+VK+RGGRI++VG+T+ RL+ETA T +G I P+ G T+IFITPG
Sbjct: 237 HAEWGEVSPETAAELNAVKARGGRIITVGSTATRLIETAATPEGSIRPYLGETDIFITPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FRA D++++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL
Sbjct: 297 YAFRASDVMLTNFHLPRSTLVMLVAAFVGHETQKRAYAHAIASGYRFYSYGDACLL 352
>gi|254503766|ref|ZP_05115917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Labrenzia
alexandrii DFL-11]
gi|222439837|gb|EEE46516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Labrenzia
alexandrii DFL-11]
Length = 360
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/357 (54%), Positives = 252/357 (70%), Gaps = 6/357 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+L RIALRP PRD+AR++VV P P +SD V DLPA L DA+V
Sbjct: 1 MRVDQFDFELSNERIALRPARPRDAARMLVVRPG-EIP-ELSDMGVRDLPALLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G R E IS TLH+R + + W + RP+K ++ D++ F +
Sbjct: 59 FNDTKVIPAQLEGKRVR--GDIEAGISVTLHLRSAADGWKAFVRPAKKLQVEDLVVF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+RL ATV +K + GE+LL F SG +L+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 GNGARLTATVKEKSDGGEVLLAFDCSGPDLDVAIAQVGHIPLPPYIAQKRGEDEQDRQDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL+ + GI+++ VTLHVGAGTF+PVK +DTDDH M
Sbjct: 175 QTIFAEKDGAVAAPTAGLHFTPELLAAIKDRGIEMHRVTLHVGAGTFLPVKADDTDDHKM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK+RG ++VS+GTTSLR+LE+A E G I P++ T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALQAVKARGNKVVSIGTTSLRILESAAQETGTIVPFADETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D LM+NFHLP+STL MLVSA G+E + YQHAI YRFYSYGD SLLF
Sbjct: 295 YKFKAIDALMTNFHLPRSTLFMLVSALSGLETMRAAYQHAIDTEYRFYSYGDASLLF 351
>gi|298291669|ref|YP_003693608.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Starkeya
novella DSM 506]
gi|296928180|gb|ADH88989.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Starkeya
novella DSM 506]
Length = 364
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 251/363 (69%), Gaps = 6/363 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD+AR++VV P + L +D V DL L DA+V
Sbjct: 1 MRVDLFDFDLPPERIALRPVSPRDAARMLVVRPGATPEL--ADAHVHDLANLLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK-EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L+G+R ++ E + LH RV+P+ W ARP+K + GD + F
Sbjct: 59 VNDTRVVPARLDGIRRRETSQGEGVRVEAMLHKRVAPDRWLALARPAKRLAPGDRIAFGG 118
Query: 120 QDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ L+ATV K GEI L F ++G L+ I+ VG IPLPPYIA KRP DA+D
Sbjct: 119 EGNACLLGTLDATVEGKGEAGEIELRFDLAGAALDEAIAAVGHIPLPPYIAAKRPDDAQD 178
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +GSVAAPTAGLHFT L++RL G++ + VTLHVGAGTF+PVK +DT
Sbjct: 179 RADYQTMFAAHEGSVAAPTAGLHFTPELIARLEERGVETHRVTLHVGAGTFLPVKADDTT 238
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A TA ALN+VK+RGGR++++GTT+ RL+E+A +E G ++ W G T+IF
Sbjct: 239 GHRMHAEWGEVSAETAVALNAVKARGGRVITIGTTATRLIESAASEGGRLDAWRGETDIF 298
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR +D +++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL
Sbjct: 299 ITPGYRFRFIDGMLTNFHLPRSTLVMLVAAFIGHEVQKRAYAHAIASGYRFYSYGDACLL 358
Query: 357 FQK 359
K
Sbjct: 359 LPK 361
>gi|260459151|ref|ZP_05807406.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium opportunistum WSM2075]
gi|259034705|gb|EEW35961.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium opportunistum WSM2075]
Length = 362
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/362 (56%), Positives = 256/362 (70%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSA ++VV P + + D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFDLPEERIALRPAEPRDSAGMLVVRPGET----LDDRRVGDLPSLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + ++ TLHMR++P+ W + RP K + GD +HF
Sbjct: 57 FNDTKVIPAQLKGIR--RRGEAQAQVEATLHMRMAPDRWLAFMRPGKRVAAGDRIHF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG S +L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 114 DGNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT L + L + G++ FVTLHVGAGTF+PVK +DT
Sbjct: 174 RADYQTIYAREEGAVAAPTAGLHFTPELFAALDAKGVERRFVTLHVGAGTFLPVKADDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + A TA+ALN+ K+RGGRI++VGTTSLRLLE+A +DG + WSG T+IF
Sbjct: 234 DHKMHAEIGSVSAATAEALNAAKARGGRIIAVGTTSLRLLESAARDDGTLAAWSGPTDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR D+LM+NFHLP+STL MLVSAF G+E + Y HAI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLETMRAAYAHAIAERYRFYSYGDASLL 353
Query: 357 FQ 358
++
Sbjct: 354 YR 355
>gi|91977073|ref|YP_569732.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisB5]
gi|123721830|sp|Q137A8|QUEA_RHOPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91683529|gb|ABE39831.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisB5]
Length = 360
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/363 (53%), Positives = 248/363 (68%), Gaps = 11/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP S IALRPV PRD+AR++VV P + + D V DLPA L D +V
Sbjct: 1 MRTELFDFDLPASSIALRPVSPRDAARMLVVRPGAT----LEDRAVRDLPALLQPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E I TL R+ + W +P+K + +GD++ F
Sbjct: 57 VNDTRVIAAQLTGRRIGRAT--EPRIEATLIKRLDGSRWQALVKPAKKLAEGDVVRF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ L+ATV K + GE+ L F+ G L++ I+ +G PLPPYIA KR D +D
Sbjct: 114 DGRVCLLGHLDATVEAKGDAGEVTLAFTFHGPALDQAIAELGATPLPPYIASKRTPDDQD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L + L + G+ ++ +TLHVGAGTF+PVKV+DT
Sbjct: 174 AADYQTMFAANEGAVAAPTAGLHFTPELDAALKARGVTLHRLTLHVGAGTFLPVKVDDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G I TA ALN+ +++GGRIV+VGTTSLRLLE+A EDG I P++ T IF
Sbjct: 234 EHKMHAEWGTISEATADALNAARAQGGRIVAVGTTSLRLLESAAREDGTIAPFADETAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD LM+NFHLP+STL MLVSAFCG+E + Y+HAI YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDALMTNFHLPRSTLFMLVSAFCGLETMQAAYRHAIDSGYRFYSYGDASLL 353
Query: 357 FQK 359
F++
Sbjct: 354 FRE 356
>gi|209885349|ref|YP_002289206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oligotropha
carboxidovorans OM5]
gi|226713845|sp|B6JFC2|QUEA_OLICO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209873545|gb|ACI93341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oligotropha
carboxidovorans OM5]
Length = 361
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/362 (52%), Positives = 248/362 (68%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLPP IALRP PRDSARL++V PN+ + DH V DLP L D IV
Sbjct: 1 MRTDLFDFDLPPECIALRPAEPRDSARLLLVRPNVG----VEDHSVRDLPGLLAPGDQIV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R + E I TL R+ + W RP++ + +GD+L F
Sbjct: 57 VNDTKVIAAQLSGRRIGGTS--EPHIDVTLIKRIDGSRWQALVRPARKLSEGDVLRF-GN 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+G+ L+A+V K GE+ L F+ G L++ I+ +G PLPPYIA +R D +D
Sbjct: 114 EGRVCLLGNLDASVEAKGEAGEVTLAFAFHGPVLDQAIADLGAPPLPPYIASRRAPDDKD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +AK +G+VAAPTAGLHFT L + L + GI + +TLHVGAGTF+PVK +DTD
Sbjct: 174 VGDYQTMFAKNEGAVAAPTAGLHFTPALEAALAARGIGIQRLTLHVGAGTFLPVKADDTD 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSE G + TA+ LN +++GGR+V+VG+TS+RLLE+A TEDGII P++G T IF
Sbjct: 234 DHKMHSEWGTVSEETAKTLNEARAKGGRVVAVGSTSMRLLESAATEDGIIQPFTGETAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FRAVD++M+NFHLP+STL MLVSAF G++ + Y HAI+ YRFYSYGD LL
Sbjct: 294 ITPGYKFRAVDVMMTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIAKGYRFYSYGDACLL 353
Query: 357 FQ 358
F+
Sbjct: 354 FR 355
>gi|118589194|ref|ZP_01546601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stappia
aggregata IAM 12614]
gi|118438523|gb|EAV45157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stappia
aggregata IAM 12614]
Length = 357
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/357 (55%), Positives = 247/357 (69%), Gaps = 6/357 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP RIALRP PRDSAR++VV P PL +SD V DLP L DA+V
Sbjct: 1 MRVDQFDFDLPNERIALRPARPRDSARMLVVRPG-EQPL-LSDAGVRDLPQLLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R I TLHMR P+ W + RP+K ++ GD + F +
Sbjct: 59 FNDTRVIPAQLEGTRLR--GDISAGIGATLHMRTGPDRWKAFVRPAKKLQLGDTVLF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+RL A V +K +GE+LL F SG +L+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 GFGTRLTAEVTEKGYSGEVLLTFDRSGPDLDVAIASVGHIPLPPYIAQKRGEDDQDRKDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL L GI+ + VTLHVGAGTF+PVK EDT DH M
Sbjct: 175 QTIFAEKDGAVAAPTAGLHFTPELLQALSYRGIEQHRVTLHVGAGTFLPVKAEDTADHKM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK RG ++VSVGTTSLR+LE++ + G+I ++G T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALLAVKVRGNKVVSVGTTSLRILESSAQKTGVITAFAGETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+A+D LM+NFHLP+STL MLVSA G++ + Y HAIS YRFYSYGD SLLF
Sbjct: 295 YRFKAIDALMTNFHLPRSTLFMLVSALSGLDTMRHAYAHAISQEYRFYSYGDASLLF 351
>gi|300023678|ref|YP_003756289.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525499|gb|ADJ23968.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Hyphomicrobium denitrificans ATCC 51888]
Length = 370
Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/365 (55%), Positives = 245/365 (67%), Gaps = 11/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCP---LVISDHLVSDLPAFLNSN 56
M FDF+LP S IALRP PRDSARL+VVHP C +SD V DLP LN
Sbjct: 1 MRTDLFDFELPDSAIALRPAEPRDSARLLVVHPVKGGCARDDAELSDKTVRDLPGLLNPG 60
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
DA+VFN+T+VI A L+GVR + ++ L +V +SW +ARP+K ++ GD +H
Sbjct: 61 DALVFNDTRVIPAALSGVR--TRGDVQAKVDFNLTKQVGDSSWRAFARPAKRLEVGDRVH 118
Query: 117 FFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G+S L+ATV K GE+ L F SG L+ I VG +PLPPYIA KR
Sbjct: 119 F-GHSGESCFLGALDATVSAKGEAGEVELAFDYSGSILDDAIRAVGVMPLPPYIALKRGA 177
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD YQT YAK G+VAAPTAGLHFT L + L + GI +FVTLHVG GTF+PVK
Sbjct: 178 DDRDRQSYQTVYAKNDGAVAAPTAGLHFTPELFAALDARGISRHFVTLHVGPGTFLPVKA 237
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+DT +H MHSE G I A TA ALN ++RGGRIV+VGTTSLR+LE+A +DG I WSG
Sbjct: 238 DDTSEHKMHSEWGEISAETAAALNETRARGGRIVAVGTTSLRVLESAAGDDGSIPAWSGD 297
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPGYRF+A+D LM+NFHLP+STL MLV+AF G+ + Y HAI YRFYSYGD
Sbjct: 298 TSIFITPGYRFKAIDALMTNFHLPRSTLFMLVAAFSGLGTMRAAYGHAIHSGYRFYSYGD 357
Query: 353 TSLLF 357
SLLF
Sbjct: 358 ASLLF 362
>gi|85716503|ref|ZP_01047474.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
sp. Nb-311A]
gi|85696692|gb|EAQ34579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
sp. Nb-311A]
Length = 371
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/365 (54%), Positives = 246/365 (67%), Gaps = 13/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PR+SAR++VVHP + D VSDLP +L D +V
Sbjct: 12 MRTDLFDFELPAESIALRPASPRNSARMLVVHPGTR----LHDQRVSDLPEWLRPGDQLV 67
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL+G R I R E I TL R+ + WS RP+K + GD++ F
Sbjct: 68 VNDTRVIAAQLHGRR---IGREAEPRIDATLIKRLDGSRWSALVRPAKKLVAGDVVRF-G 123
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG+ L+A V K GE+ FS G L+R I+ +G+ PLPPYIA KR D +
Sbjct: 124 NDGRVCFLGHLDAQVESKGEEGEVTFAFSFHGPTLDRAIAELGSTPLPPYIASKRAPDDQ 183
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 184 DAADYQTMFAAHEGAVAAPTAGLHFTPVIETALRERGVGLHRITLHVGAGTFLPVKAEDT 243
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MHSE G I A TA ALN+ +SRGGRIV+VGTTSLRLLE+A EDG I P++G T I
Sbjct: 244 AGHRMHSEWGTISAETADALNTARSRGGRIVAVGTTSLRLLESAAAEDGRIAPFTGETAI 303
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRA+DILM+NFHLP+STL MLVSAF G++ K+ Y HAI+ YRFYSYGD L
Sbjct: 304 FITPGYRFRAIDILMTNFHLPRSTLFMLVSAFSGLKTMKQAYAHAIAAGYRFYSYGDACL 363
Query: 356 LFQKR 360
LF +R
Sbjct: 364 LFPER 368
>gi|170746470|ref|YP_001752730.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium radiotolerans JCM 2831]
gi|238688890|sp|B1M584|QUEA_METRJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|170652992|gb|ACB22047.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium radiotolerans JCM 2831]
Length = 354
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/357 (56%), Positives = 249/357 (69%), Gaps = 11/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD+ R++VV P PLV D V DLP L + DA+V
Sbjct: 1 MRVDLFDFELPETSIALRPAEPRDAGRMLVVRPG--APLV--DRTVRDLPDALRAGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+LNGVR + LH+R +P+ W +ARP+K + GD L F
Sbjct: 57 FNDTRVIPARLNGVR-TRPGAPGQRTEVMLHLREAPDRWRAFARPAKRLTAGDALRF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV++K GEI+L F +G EL+ I+ G +PLPPYIA KR DARD DY
Sbjct: 113 ---GDLTATVLEKAEAGEIVLAFDRAGPELDAAIAAEGALPLPPYIAGKRATDARDATDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF+ LL+ L + G++ + VTLHVGAGTF+PVK EDTD H M
Sbjct: 170 QTVYARNPGAVAAPTAGLHFSDALLADLDAAGLQRHHVTLHVGAGTFLPVKAEDTDGHRM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+EIG +DA TA ALN+ ++ GGRIV+VGTT+LRLLE+A DG + P+SG T IFITPG
Sbjct: 230 HAEIGILDAATADALNAARAAGGRIVAVGTTALRLLESAARPDGTLAPFSGPTEIFITPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRFRAVD L++NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD SLLF
Sbjct: 290 YRFRAVDALVTNFHLPRSTLFMLVSAFSGLETMRAAYAHAIGAGYRFYSYGDASLLF 346
>gi|197104869|ref|YP_002130246.1| S-adenosylmethionine tRNA ribosyltransferase [Phenylobacterium
zucineum HLK1]
gi|238690135|sp|B4R9Q3|QUEA_PHEZH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196478289|gb|ACG77817.1| S-adenosylmethionine tRNA ribosyltransferase [Phenylobacterium
zucineum HLK1]
Length = 357
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/362 (52%), Positives = 240/362 (66%), Gaps = 10/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IALRP PRD+ARL++V P D V DLP L + D +V
Sbjct: 1 MKLADFDFDLPEEAIALRPANPRDAARLLLVEPGQD----FRDLAVRDLPGLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L GVR +R + TLH R + + W+ + RP K + GD + F
Sbjct: 57 LNDTRVIPARLKGVRTREGSR--VAVEATLHQRKAGHVWTAFMRPGKRLAPGDRVSFGET 114
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D ++ L+ATV +K GE+ L F +SG +L+ I+ G +PLPPYIA KR D +D
Sbjct: 115 DDRACFLGALDATVKEKGEGGEVTLAFDLSGPDLDAAIAERGAMPLPPYIAAKRAEDEQD 174
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ GSVAAPTAGLHFT LL+RL G+ VTLHVGAGTF+PVK ED
Sbjct: 175 RADYQTVYAEEDGSVAAPTAGLHFTPELLARLAQAGVTTERVTLHVGAGTFLPVKTEDIS 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G +DA TA LN+ ++ GGRIV VGTTSLRLLE+A EDG++ P+ T IF
Sbjct: 235 EHRMHAEWGEVDAATADRLNAARAAGGRIVCVGTTSLRLLESAAGEDGVVRPFRDETAIF 294
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRA D LM+NFHLPKSTL MLV AF G + + Y+HAI YRFYSYGD+SLL
Sbjct: 295 ITPGYRFRAADGLMTNFHLPKSTLFMLVCAFAGTDTMRAAYRHAIETGYRFYSYGDSSLL 354
Query: 357 FQ 358
++
Sbjct: 355 WR 356
>gi|217979658|ref|YP_002363805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylocella silvestris BL2]
gi|254764284|sp|B8EIV1|QUEA_METSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|217505034|gb|ACK52443.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocella silvestris BL2]
Length = 361
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/359 (51%), Positives = 243/359 (67%), Gaps = 8/359 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP + IALRP PRD+ARL+VV P P + D + DLP L + D +V
Sbjct: 1 MRVDQFDFDLPDASIALRPAHPRDAARLLVVRPGRLSPAALDDRFIRDLPELLAAGDVLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R R E I TLH R + W + RP+K ++ G+ + F
Sbjct: 61 VNDTRVIPARLDGFR----ARGEALARIEATLHKREGGDLWRAFLRPAKKLRAGETILFS 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S G ++L A V++K GE+LL F +SG EL+ + VG +PLPPYI+ KR D D
Sbjct: 117 S--GDAKLAARVVEKGEDGEVLLGFELSGAELDLALERVGRMPLPPYISSKRGADESDAA 174
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A G+VAAPTA LHFT LL+ L++ G+++ VTLHVGAGTF+PVK EDTDDH
Sbjct: 175 DYQTLFADRPGAVAAPTASLHFTPALLAALVAKGVQIERVTLHVGAGTFLPVKAEDTDDH 234
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A TA ALN+ + G R+V+ GTTSLR+LE+A DG + +SG T+IFIT
Sbjct: 235 RMHAEWGEVSAETAGALNAARRAGRRVVAAGTTSLRILESAAGPDGAVAAFSGDTSIFIT 294
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+AVD+L++NFHLP+STL MLV AF G++ + Y HAI+ YRFYSYGD LL+
Sbjct: 295 PGYSFKAVDLLLTNFHLPRSTLFMLVCAFSGLQTMRDAYNHAIAAGYRFYSYGDACLLY 353
>gi|167646153|ref|YP_001683816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
sp. K31]
gi|189038513|sp|B0T8H5|QUEA_CAUSK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167348583|gb|ABZ71318.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Caulobacter sp. K31]
Length = 373
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/366 (54%), Positives = 250/366 (68%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP + IALRP PRDSARL+VV P + D +V DLP FL DA+V
Sbjct: 1 MRLSDFDFHLPDAAIALRPAEPRDSARLLVVRPGEG----LEDRIVRDLPDFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHI----NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L G R + + TLH R++P+ W + RP K +K+GD +
Sbjct: 57 FNDTRVIPARLMGRRAGRETGGGDGSPVAVEATLHRRIAPDRWVAFMRPGKRLKEGDRIA 116
Query: 117 F-FSQDGQSR---LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F QD + L+ATVI K GEI L F +G++L+ ++ G +PLPPYIA KR
Sbjct: 117 FGHDQDRACQAGMLDATVIAKHEGGEIELAFDFAGVDLDLAVAAHGEMPLPPYIAAKRAE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFTS+LL RL + G+ ++FVTLHVGAGTF+PVK
Sbjct: 177 DDRDRADYQTVYAREDGSVAAPTAGLHFTSDLLERLKAGGVSLHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+ DH MH+E G + A A ALN+ ++ GGRIV VGTTSLRLLE+AT ED II P++
Sbjct: 237 DVVADHKMHAEFGEVPAAVADALNAARAAGGRIVCVGTTSLRLLESATGEDRIIKPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFRA D+LM+NFHLPKSTL MLVSAF G K Y+HAI+ YRFYSYGD
Sbjct: 297 TAIFITPGYRFRAADVLMTNFHLPKSTLFMLVSAFAGQATMKAAYEHAIAAGYRFYSYGD 356
Query: 353 TSLLFQ 358
SLLF+
Sbjct: 357 GSLLFR 362
>gi|75675988|ref|YP_318409.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
winogradskyi Nb-255]
gi|91207388|sp|Q3SRN4|QUEA_NITWN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|74420858|gb|ABA05057.1| Queuosine biosynthesis protein [Nitrobacter winogradskyi Nb-255]
Length = 360
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/365 (53%), Positives = 244/365 (66%), Gaps = 13/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PRDSAR++VV P + D VSDLP +L D +V
Sbjct: 1 MRTDLFDFELPAGSIALRPASPRDSARMLVVQPGSG----VRDQQVSDLPEWLRPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL+G R I R E I TL R+ + WS RP++ + GDI+
Sbjct: 57 VNDTRVIAAQLHGRR---IGREAEPRIDATLIKRLDGSRWSALVRPARKLMAGDIVRL-G 112
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+G+ L+A V K GE+ FS G L++ I+ +G+ PLPPYIA KR D R
Sbjct: 113 NEGRVCFLGHLDARVESKGEEGEVTFAFSFHGPMLDQAIAELGSTPLPPYIASKRAPDDR 172
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVKV+DT
Sbjct: 173 DASDYQTMFATHEGAVAAPTAGLHFTPEIETALRGRGVGLHRITLHVGAGTFLPVKVDDT 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MHSE G I TA ALN+ +SRGGRIV+VGTTSLRLLE+A +DG I P++G T I
Sbjct: 233 AGHRMHSEWGAISTETADALNAARSRGGRIVAVGTTSLRLLESAADDDGRIKPFTGETAI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPG+RFRAVDILM+NFHLP+STL MLVSAF G+E K+ Y HAIS YRFYSYGD L
Sbjct: 293 FITPGHRFRAVDILMTNFHLPRSTLFMLVSAFSGLETMKQAYAHAISAGYRFYSYGDACL 352
Query: 356 LFQKR 360
LF +R
Sbjct: 353 LFPER 357
>gi|299133970|ref|ZP_07027164.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Afipia sp.
1NLS2]
gi|298591806|gb|EFI52007.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Afipia sp.
1NLS2]
Length = 361
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/361 (52%), Positives = 242/361 (67%), Gaps = 11/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLPP IALRPV PR+SARL+VV P + D+ V DLP L + D +V
Sbjct: 1 MRTDLFDFDLPPESIALRPVEPRESARLLVVRPGDG----LDDYTVRDLPDLLRAGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL G R E I TL RV + W RP++ + +GD++ F
Sbjct: 57 VNDTKVIAAQLAGRRVGGAT--EPRIDVTLIKRVDGSRWQALVRPARKLAEGDVVRF-GN 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+G+ L+ATV K GEI L F+ G L++ I+ +G PLPPYIA +R D +D
Sbjct: 114 EGRVCLLGNLDATVEAKGEAGEITLSFAFHGPVLDQAIADLGAPPLPPYIASRRAPDEKD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +AK +G+VAAPTAGLHFT L + L + GI V +TLHVGAGTF+PVK +DT
Sbjct: 174 VGDYQTMFAKHEGAVAAPTAGLHFTPALEAALQARGIGVQRLTLHVGAGTFLPVKTDDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+E G I A TA+ LN +++GGRIV+VG+T++RLLE+A E+G I P++G T IF
Sbjct: 234 DHKMHAEWGTISAETARTLNEARAKGGRIVAVGSTAMRLLESAADENGTIQPFTGETAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD++M+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LL
Sbjct: 294 ITPGYRFRAVDVMMTNFHLPRSTLFMLVSAFSGLETMQAAYAHAIEKGYRFYSYGDACLL 353
Query: 357 F 357
F
Sbjct: 354 F 354
>gi|148255729|ref|YP_001240314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. BTAi1]
gi|166216702|sp|A5EJR4|QUEA_BRASB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146407902|gb|ABQ36408.1| S-adenosylmethionine [Bradyrhizobium sp. BTAi1]
Length = 364
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 242/363 (66%), Gaps = 11/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IALRP PR++AR++VV + V+ D +V+DLP +L D +V
Sbjct: 1 MRTDLFDFHLPPENIALRPASPREAARMLVVQGDG----VLRDRIVADLPDWLEPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R E +I TL R+ + W RP+K + GD + F
Sbjct: 57 VNDTKVIAAQLSGRRVS--RETEAKIEATLIKRLDGSRWQALVRPAKKLAPGDTIRF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+G+ L+ATV K GE+ L F G L++ I+ +G PLPPYIA KRP D +D
Sbjct: 114 EGKVCLLGHLDATVEAKGEEGEVTLSFVFHGPALDQAIADLGRPPLPPYIAGKRPADEQD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L RL + G+ + VTLHVGAGTF+PVKVEDT+
Sbjct: 174 AADYQTMFAAKEGAVAAPTAGLHFTPALEQRLRARGVGLQRVTLHVGAGTFLPVKVEDTE 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A TA ALN +++GGRIV+VGTTS+RLLE+A DG I P+ T+IF
Sbjct: 234 GHRMHAEWGSLSAETAAALNEARAKGGRIVAVGTTSMRLLESAALPDGTIAPFEAETSIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVDILM+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LL
Sbjct: 294 ITPGYRFRAVDILMTNFHLPRSTLFMLVSAFAGLETMQAAYAHAIRSGYRFYSYGDACLL 353
Query: 357 FQK 359
F++
Sbjct: 354 FRQ 356
>gi|154248190|ref|YP_001419148.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Xanthobacter autotrophicus Py2]
gi|238686741|sp|A7IN97|QUEA_XANP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154162275|gb|ABS69491.1| Queuosine biosynthesis protein [Xanthobacter autotrophicus Py2]
Length = 362
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/362 (50%), Positives = 244/362 (67%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD+AR++VV P + L SD V DLP F+ +NDA+V
Sbjct: 1 MRVDAFDFDLPEEHIALRPAEPRDAARMLVVRPGGAPEL--SDLKVRDLPDFITANDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A L GVR I L R+ + W +A+P K ++ GD + F +
Sbjct: 59 VNDTRVIPAALEGVR-ERDGGSAVRIEANLIKRLDASRWQAFAKPGKRLRVGDRVRFGGE 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A + K + G ++L F ++G L+ ++ VG +P+PPYIA +R D RD
Sbjct: 118 GSACLLGALDAQIAAKEDDGSVILAFDLAGTALDEAVTAVGHMPIPPYIAARRAEDDRDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A++ GSVAAPTA LHFT L++R+ + G ++ VTLHVGAGTF+PVK EDT
Sbjct: 178 ADYQTLFARVSGSVAAPTASLHFTPELMARIAATGASMHTVTLHVGAGTFLPVKAEDTTG 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A TA ALN+VK++GGRI +VG+TS RL+E+AT EDG I P+ G T+IFI
Sbjct: 238 HRMHAEWGEVSADTAAALNAVKAKGGRIFTVGSTSTRLIESATGEDGTIRPFVGETDIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD +++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL
Sbjct: 298 TPGYRFRAVDGMLTNFHLPRSTLVMLVAAFVGHEAQKRAYAHAIAAGYRFYSYGDACLLL 357
Query: 358 QK 359
+
Sbjct: 358 PE 359
>gi|91207399|sp|Q6N6L0|QUEA_RHOPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 360
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 252/364 (69%), Gaps = 13/364 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P PL D +V DLPA L D +V
Sbjct: 1 MRTELFDFDLPAENIALRPVSPRDAARMLVVRPG--APL--EDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL G R I R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLTGRR---IGRGLEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRF-G 112
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG+ L+ATV K + GE+ LVFS G L++ I+ VG PLPPYIA KR DA+
Sbjct: 113 HDGRVCLLGHLDATVEAKGDAGEVTLVFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQ 172
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 173 DIADYQTMFASNEGAVAAPTAGLHFTAELETALAACGVGLHRITLHVGAGTFLPVKAEDT 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+I
Sbjct: 233 SEHRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SL
Sbjct: 293 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASL 352
Query: 356 LFQK 359
LF+
Sbjct: 353 LFRN 356
>gi|39935671|ref|NP_947947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris CGA009]
gi|39649524|emb|CAE28046.1| S-adenosylmethionine tRNA ribosyltransferase [Rhodopseudomonas
palustris CGA009]
Length = 364
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 252/364 (69%), Gaps = 13/364 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P PL D +V DLPA L D +V
Sbjct: 5 MRTELFDFDLPAENIALRPVSPRDAARMLVVRPG--APL--EDRIVRDLPALLAPGDQLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL G R I R E +I TL R+ W +P+K + GD++ F
Sbjct: 61 VNDTRVIAAQLTGRR---IGRGLEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRF-G 116
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG+ L+ATV K + GE+ LVFS G L++ I+ VG PLPPYIA KR DA+
Sbjct: 117 HDGRVCLLGHLDATVEAKGDAGEVTLVFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQ 176
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 177 DIADYQTMFASNEGAVAAPTAGLHFTAELETALAACGVGLHRITLHVGAGTFLPVKAEDT 236
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+I
Sbjct: 237 SEHRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSI 296
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SL
Sbjct: 297 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASL 356
Query: 356 LFQK 359
LF+
Sbjct: 357 LFRN 360
>gi|90424090|ref|YP_532460.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisB18]
gi|90106104|gb|ABD88141.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisB18]
Length = 379
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/359 (52%), Positives = 248/359 (69%), Gaps = 11/359 (3%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP + IALRP PRD+ARL+VV P + + D +V DLP +L DA+V N+T+
Sbjct: 27 FDFELPATAIALRPAQPRDAARLLVVRPGAA----LHDGVVRDLPDWLAPGDALVVNDTR 82
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ-- 123
VI AQL+G R + E +I TL R+ + W + +K + +GD++ F DG+
Sbjct: 83 VIAAQLSGRRIGRDS--EAKIEATLIKRLDGSRWQALVKGAKKLNEGDVVRF-GHDGRVC 139
Query: 124 --SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+L+ATV K GEI L FS G L++ I+ +G PLPPYIA KR D RD DYQ
Sbjct: 140 LLGQLDATVEHKGEAGEITLSFSFHGPTLDQAIAELGAPPLPPYIASKRAPDDRDAADYQ 199
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A +G+VAAPTAGLHFT L + L + G+ ++ VTLHVGAGTF+PVKV+DT+DH MH
Sbjct: 200 TMFAAHEGAVAAPTAGLHFTPELEAALAARGVSIHRVTLHVGAGTFLPVKVDDTEDHKMH 259
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I TA ALN+V ++G RIV+VG+TSLRLLE+A +DG I P++ T IFITPGY
Sbjct: 260 AEWGTISRATADALNAVHAKGCRIVAVGSTSLRLLESAAADDGSIQPFADDTAIFITPGY 319
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
RF+AVD++M+NFHLP+STL MLVSAF G E ++ Y HAI+ YRFYSYGD LLF +R
Sbjct: 320 RFKAVDLMMTNFHLPRSTLFMLVSAFAGRETMQRAYAHAIATGYRFYSYGDACLLFPER 378
>gi|328543843|ref|YP_004303952.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Polymorphum gilvum SL003B-26A1]
gi|326413587|gb|ADZ70650.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Polymorphum gilvum SL003B-26A1]
Length = 365
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/365 (54%), Positives = 250/365 (68%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PRD+ARL+VV P S L +D V DL L DA+V
Sbjct: 1 MRVDVFDFDLPPERIALRPARPRDAARLLVVRPGQSPEL--ADCGVRDLARELEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI AQL G R R E I TLH+R + W + RP+K + GD + F
Sbjct: 59 FNDTRVIPAQLEGTR----TRGEAVAGIGATLHLRAGADRWWAFVRPAKKLAVGDRVRF- 113
Query: 119 SQDGQSR------LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
G+ R L+ATV DK ++GE+LL F ++G +L++ I+ VG IPLPPYIA +R
Sbjct: 114 --GGEGRACLLGTLDATVADKRDSGEVLLAFDLAGPDLDQAIAAVGHIPLPPYIAARRGE 171
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D +D DYQT +A G+VAAPTAGLHFT L+ L + GI+ + VTLHVGAGTF+PVK
Sbjct: 172 DEQDRSDYQTMFADKDGAVAAPTAGLHFTPALIEALDARGIERHTVTLHVGAGTFLPVKA 231
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
EDT DH MH+E G + A TA AL +V++RG R+V+VGTTSLR+LE+A + +SG
Sbjct: 232 EDTADHRMHAEWGKVSAATAAALKAVRARGNRVVAVGTTSLRILESAAQGADGLTAFSGE 291
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ ++ Y HAI+ YRFYSYGD
Sbjct: 292 TSIFITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFSGLQTMRRAYAHAIASGYRFYSYGD 351
Query: 353 TSLLF 357
LLF
Sbjct: 352 ACLLF 356
>gi|323136311|ref|ZP_08071393.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocystis sp. ATCC 49242]
gi|322398385|gb|EFY00905.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocystis sp. ATCC 49242]
Length = 359
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/362 (51%), Positives = 238/362 (65%), Gaps = 10/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSAR++VV P D V DLPA L DA+V
Sbjct: 1 MRVDLFDFELPQDRIALRPANPRDSARMLVV-PGKGA---FEDKSVRDLPACLRGGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R + TL R+ + W RP+K + GD++ F +
Sbjct: 57 VNDTRVIHARLSGRRL--RGELSAGVEATLIERLDASRWRALMRPAKKLAIGDLIRFGRE 114
Query: 121 DG----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G Q L+A V + + GE+ L F +SG L+ I + G +PLPPYIA KR DA D
Sbjct: 115 GGEACLQGALDARVEGRGDAGEVTLAFDLSGASLDEAIEVAGEMPLPPYIAGKRAADASD 174
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTAGLHFT NLL+ + + G++++ VTLHVGAGTF+PVK +DT
Sbjct: 175 ETDYQTVFAREAGAVAAPTAGLHFTPNLLAAVEARGVQLHRVTLHVGAGTFLPVKADDTG 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH E ID+ TA ALN ++RGGRIV+VGTT+LR+LE+A DG + P++ T IF
Sbjct: 235 SHRMHEEFARIDSGTAAALNEARARGGRIVAVGTTALRVLESAAAPDGRLAPYAQRTGIF 294
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRA D+L++NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD LL
Sbjct: 295 ITPGYRFRATDMLLTNFHLPRSTLFMLVSAFSGLERMKAAYAHAIEDGYRFYSYGDACLL 354
Query: 357 FQ 358
+
Sbjct: 355 HR 356
>gi|192291253|ref|YP_001991858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris TIE-1]
gi|238692597|sp|B3QIN0|QUEA_RHOPT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|192285002|gb|ACF01383.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris TIE-1]
Length = 360
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 252/364 (69%), Gaps = 13/364 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P S PL D +V DLPA L D +V
Sbjct: 1 MRTELFDFDLPTQNIALRPVSPRDAARMLVVRP--SVPL--EDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL G R I R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLTGRR---IGRGLEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRF-G 112
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG+ L+ATV K + GE+ L FS G L++ I+ VG PLPPYIA KR DA+
Sbjct: 113 HDGRVCLLGHLDATVEAKGDAGEVTLAFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQ 172
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 173 DIADYQTMFASNEGAVAAPTAGLHFTAELETALAARGVGLHRITLHVGAGTFLPVKAEDT 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+I
Sbjct: 233 SEHRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SL
Sbjct: 293 FITPGYRFRAVDMLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASL 352
Query: 356 LFQK 359
LF+
Sbjct: 353 LFRN 356
>gi|146340922|ref|YP_001205970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. ORS278]
gi|166216703|sp|A4YV19|QUEA_BRASO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146193728|emb|CAL77745.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. ORS278]
Length = 364
Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 238/363 (65%), Gaps = 11/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IALRP PR++AR++VV + V+ D + DLP +L D +V
Sbjct: 1 MRTDLFDFHLPPENIALRPASPREAARMLVVQGDG----VLRDRTIGDLPDWLEPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R E +I TL R+ + W RP+K + GD + F
Sbjct: 57 VNDTKVIAAQLSGRRIS--RETEAKIEATLIKRLDGSRWQALVRPAKKLLAGDTIRF-GN 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+G+ L+ATV K GE+ L F G L++ I+ +G PLPPYIA KRP D +D
Sbjct: 114 EGKVCLLGHLDATVEAKGEEGEVTLSFVFHGPALDQAIADLGRPPLPPYIAGKRPADEQD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L RL + G+ + VTLHVGAGTF+PVKVEDT+
Sbjct: 174 AQDYQTMFAAKEGAVAAPTAGLHFTPALEQRLRARGVGLQRVTLHVGAGTFLPVKVEDTE 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + TA ALN K+ GGRIV+VGTTS+RLLE+A DG I P+ T+IF
Sbjct: 234 GHRMHAEWGSLTPETAAALNQAKAEGGRIVAVGTTSMRLLESAALPDGTIAPFEAETSIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVDILM+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LL
Sbjct: 294 ITPGYRFRAVDILMTNFHLPRSTLFMLVSAFAGLETMQAAYAHAIESGYRFYSYGDACLL 353
Query: 357 FQK 359
F++
Sbjct: 354 FRQ 356
>gi|92117315|ref|YP_577044.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
hamburgensis X14]
gi|91800209|gb|ABE62584.1| Queuosine biosynthesis protein [Nitrobacter hamburgensis X14]
Length = 365
Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 194/362 (53%), Positives = 242/362 (66%), Gaps = 13/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PRDSAR++VV P + D VSDLP +L D +V
Sbjct: 6 MRTDLFDFELPSESIALRPASPRDSARMLVVQPGAG----LHDQRVSDLPKWLRPGDQLV 61
Query: 61 FNNTKVITAQLNGVRFCHINR-REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL G R I R E I TL R+ + W+ +P++ + GDI+ F
Sbjct: 62 VNDTRVIAAQLRGRR---IGRDAEPRIEATLIKRLDGSRWNALVKPARKLIAGDIVRF-G 117
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+G+ L+A V K GE+ FS G L++ I+ +G+ PLPPYIA KR D R
Sbjct: 118 NEGRVCFLGHLDAQVESKGEEGEVTFAFSFHGPTLDQAIADLGSPPLPPYIASKREPDDR 177
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 178 DVADYQTMFAVHEGAVAAPTAGLHFTPAVEAVLRERGVGLHRLTLHVGAGTFLPVKTEDT 237
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MHSE G I A TA ALN+ ++ GGRIV+VGTTSLRLLE+AT +DG I P++G T I
Sbjct: 238 VGHRMHSEWGTISAETADALNAARASGGRIVAVGTTSLRLLESATADDGRIAPFTGETAI 297
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVDILM+NFHLP+STL MLVSAF G+E K+ Y HAI+ YRFYSYGD L
Sbjct: 298 FITPGYRFRAVDILMTNFHLPRSTLFMLVSAFSGLETMKQAYAHAIAAGYRFYSYGDACL 357
Query: 356 LF 357
LF
Sbjct: 358 LF 359
>gi|329889500|ref|ZP_08267843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas diminuta ATCC 11568]
gi|328844801|gb|EGF94365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas diminuta ATCC 11568]
Length = 364
Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/368 (53%), Positives = 249/368 (67%), Gaps = 16/368 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP + IALRP PRDSARL+VV + ++ DLP FL DA+V
Sbjct: 1 MRTSDFDFDLPEACIALRPADPRDSARLLVVKGG-----DLQHRIIRDLPDFLQPGDALV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
FN+T+VI A+L+GVR H E E + TLH R +P+ WS + +P K +K GD +
Sbjct: 56 FNDTRVIPARLSGVR--HRTAPEGELLSVPVEATLHHRDAPDVWSAFMKPGKRLKVGDRV 113
Query: 116 HFFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
F ++ + +++A + K G + L F ++G L+ I VG +PLPPYIA KR
Sbjct: 114 RFGREEDNACLLGQVDAEITAKGEDGLVTLRFDLAGPVLDDAIREVGVMPLPPYIAAKRA 173
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D +D DYQT +A+ GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK
Sbjct: 174 EDDQDLKDYQTVFAEHDGSVAAPTAGLHFTPALLDAIRARGVTTHAVTLHVGAGTFLPVK 233
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+DT DH MHSE G + A TA ALN+V++ GGRIV VGTTSLRLLE+AT EDG+I P+ G
Sbjct: 234 ADDTADHKMHSEWGEVSAETAAALNAVRAAGGRIVCVGTTSLRLLESATGEDGVIQPFHG 293
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFITPGYRFRA D+LM+NFHLPKSTL MLVSAF G+E + Y HAI YRFYSYG
Sbjct: 294 DTAIFITPGYRFRACDVLMTNFHLPKSTLFMLVSAFAGLETMRAAYAHAIDSGYRFYSYG 353
Query: 352 DTSLLFQK 359
D SLLF++
Sbjct: 354 DGSLLFRE 361
>gi|86749987|ref|YP_486483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris HaA2]
gi|86573015|gb|ABD07572.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris HaA2]
Length = 384
Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 247/363 (68%), Gaps = 11/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRP+ PRD+AR++VV P + P D +V DLPA L D +V
Sbjct: 27 MRTDLFDFDLPAENIALRPMSPRDAARMLVVRPG-AAP---EDRVVRDLPALLQPGDQLV 82
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL+G R E +I TL R+ + W +P+K + +GD++ F
Sbjct: 83 VNDTRVIAAQLSGRRIGRAT--EPKIEATLIKRLDGSRWQALVKPAKKLAEGDVVRF-GH 139
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ L+ATV K GE+ L F G L++ I+ +G PLPPYIA KR D RD
Sbjct: 140 DGRVCLLGHLDATVEVKGEAGEVTLAFCFHGPALDQAIAELGATPLPPYIASKRAPDDRD 199
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L + L + G+ V+ VTLHVGAGTF+PVK +DT
Sbjct: 200 AADYQTMFAANEGAVAAPTAGLHFTPELDAALAARGVTVHRVTLHVGAGTFLPVKTDDTA 259
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G I TA ALN+ +++GGRIV+VGTTSLRLLE+A +DG I P++ T IF
Sbjct: 260 EHRMHAEWGTIGRDTAAALNAARAQGGRIVAVGTTSLRLLESAARDDGTIAPFADETAIF 319
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FRAVD+LM+NFHLP+STL MLVSAFCG+E + Y+HAI YRFYSYGD SLL
Sbjct: 320 ITPGYKFRAVDVLMTNFHLPRSTLFMLVSAFCGLETMQAAYRHAIETGYRFYSYGDASLL 379
Query: 357 FQK 359
F++
Sbjct: 380 FRE 382
>gi|296445819|ref|ZP_06887771.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylosinus trichosporium OB3b]
gi|296256647|gb|EFH03722.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylosinus trichosporium OB3b]
Length = 371
Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/356 (54%), Positives = 239/356 (67%), Gaps = 11/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF+LP IALRP PRDSARL+VV P+ SD VSDLP L DA+V
Sbjct: 24 MRVELFDFELPQEAIALRPASPRDSARLLVVPPDGH----FSDRSVSDLPQLLAPGDALV 79
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R +R I TL RV + W RP+K + G+ + F
Sbjct: 80 VNDTQVIHARLSGFRARGESR--AHIDATLIERVGADRWRALVRPAKKLGVGESVRF--- 134
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LEA V++K GEIL FS++G L+ + G +PLPPYIA KR DARD DY
Sbjct: 135 --AEGLEARVVEKGENGEILFAFSLAGSALDAAVEASGVMPLPPYIAGKRAADARDEADY 192
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT L+ L + G+ ++ VTLHVGAGTF+PVK EDT +H M
Sbjct: 193 QTLFAARAGAVAAPTAGLHFTPRLVDALTARGVSLHSVTLHVGAGTFLPVKAEDTAEHRM 252
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA TA ALN ++RGGRIV+VGTT+LR+LE+A DG I+P++ T IFITPG
Sbjct: 253 HAEWGAIDAATADALNETRARGGRIVAVGTTALRVLESAAGADGRISPFADRTAIFITPG 312
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFRAVD L++NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD LL
Sbjct: 313 YRFRAVDALLTNFHLPRSTLFMLVSAFSGLERMKAAYAHAIGSGYRFYSYGDACLL 368
>gi|27379800|ref|NP_771329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium japonicum USDA 110]
gi|46577026|sp|Q89L59|QUEA_BRAJA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|27352953|dbj|BAC49954.1| S-adenosylmethionine tRNA ribosyltransferase [Bradyrhizobium
japonicum USDA 110]
Length = 366
Score = 365 bits (936), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 242/363 (66%), Gaps = 14/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP RIALRP PRDSA+++VV + D +S+LP +L D +V
Sbjct: 1 MRTDLFDFDLPAERIALRPASPRDSAKMLVVEGG-----ALRDRTISELPQWLKRGDQLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+TKVI AQL G R I R E +I TL R+ + W +P+K + GD + F
Sbjct: 56 VNDTKVIAAQLKGRR---IGRETEPKIEATLIKRLDGSRWQALVKPAKKLIAGDRIRF-G 111
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+G+ L+A V K + GE+ L FS G L++ I+ +G+ PLPPYIA KR D +
Sbjct: 112 NEGKVCLLGHLDAEVEAKGSEGEVTLSFSFHGPALDQAIADLGSPPLPPYIASKRTPDDQ 171
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D+ DYQT +A +G+VAAPTAGLHFT L L G+ + VTLHVGAGTF+PVKVEDT
Sbjct: 172 DFADYQTMFAANEGAVAAPTAGLHFTPALEQALRERGVGLNRVTLHVGAGTFLPVKVEDT 231
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MH+E G I A TA+ LN + GGRI++VGTTSLRLLE+A +EDG I P++ T+I
Sbjct: 232 AGHKMHAEWGTISAETAERLNIARHNGGRIIAVGTTSLRLLESAASEDGTIQPFAAETSI 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVDIL++NFHLPKSTL MLVSAF G+E ++ Y HAI+ YRFYSYGD L
Sbjct: 292 FITPGYRFRAVDILLTNFHLPKSTLFMLVSAFSGLETMRRAYAHAIAQGYRFYSYGDACL 351
Query: 356 LFQ 358
LF+
Sbjct: 352 LFR 354
>gi|316934200|ref|YP_004109182.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris DX-1]
gi|315601914|gb|ADU44449.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris DX-1]
Length = 360
Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/364 (53%), Positives = 248/364 (68%), Gaps = 13/364 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRPV PRD+AR++VV P PL D +V DLPA L D +V
Sbjct: 1 MRTDLFDFDLPAGNIALRPVSPRDAARMLVVRPG--APL--EDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL G R I R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLAGHR---IGRGPEPKIDATLIKRLDGARWQALVKPAKKLVPGDVVRF-G 112
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG+ L+ATV K GEI L FS G L++ I+ +G PLPPYIA KRP D +
Sbjct: 113 HDGRVCLLGHLDATVEAKGEAGEITLAFSFHGPVLDQAIAEIGATPLPPYIASKRPPDVQ 172
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT++L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 173 DVADYQTMFAANEGAVAAPTAGLHFTADLEAALAARGVGLHRITLHVGAGTFLPVKAEDT 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MH+E G I TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I ++ T+I
Sbjct: 233 AEHKMHAEWGTISRATAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAAFADETSI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SL
Sbjct: 293 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASL 352
Query: 356 LFQK 359
LF+
Sbjct: 353 LFRN 356
>gi|182679292|ref|YP_001833438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Beijerinckia indica subsp. indica ATCC 9039]
gi|238691230|sp|B2IHG4|QUEA_BEII9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|182635175|gb|ACB95949.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 367
Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 252/361 (69%), Gaps = 8/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD++RL+VV P+ ++DH + +LP FL + D +V
Sbjct: 1 MRVDLFDFDLPPERIALRPVEPRDASRLLVVRPDSGD---MTDHGMRELPDFLRAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R +R +I TLH R W + +P+K ++ G+ + F Q
Sbjct: 58 VNDTRVIPARLHGFRSRGESR--AKIEATLHKREGEALWRAFVKPAKKLRVGETICFARQ 115
Query: 121 DGQSR---LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ + LEA V++K GE++L F+ +G L+ + L+G +PLPPYIA KR D++D
Sbjct: 116 EPGTEVESLEAEVLEKGAEGEVVLGFNRAGAALDAALDLLGEMPLPPYIAGKRAPDSQDS 175
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+DYQT +A G+VAAPTA LHFT L++ + + G+ + VTLHVGAGTF+PVK EDTD
Sbjct: 176 LDYQTLFANRSGAVAAPTASLHFTPRLIAAIEARGVTICKVTLHVGAGTFLPVKAEDTDA 235
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A A LN V + GGRI++ GTTSLRLLE+A EDG+I P+ G T+IF+
Sbjct: 236 HRMHAEWGEVSAEVAAFLNKVHAAGGRIIAAGTTSLRLLESAVDEDGLIQPFQGETSIFM 295
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+RFRAVDIL++NFHLP+STL MLV AF G+E ++ Y HAI+ +YRFYSYGD LLF
Sbjct: 296 TPGFRFRAVDILLTNFHLPRSTLFMLVCAFAGLETMRRAYAHAIAASYRFYSYGDACLLF 355
Query: 358 Q 358
+
Sbjct: 356 R 356
>gi|307293389|ref|ZP_07573235.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Sphingobium
chlorophenolicum L-1]
gi|306881455|gb|EFN12671.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Sphingobium
chlorophenolicum L-1]
Length = 342
Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/358 (52%), Positives = 232/358 (64%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSARL++V S + D +V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPESIALRPASPRDSARLLLV----SGDALFEDRIVRDLPGLLRPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R E I TLH R+S W + R +K ++ GD + F +
Sbjct: 57 FNDTKVIPAQLEGMRG------EARIGATLHKRLSLRQWQAFLRNAKRVRDGDRIDFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A + G + L F G E +E + G +PLPPYIA KRP D RD D
Sbjct: 111 -----VTAIAGPRDEDGGVTLSFE--GEEPVEVLLERAGRMPLPPYIASKRPTDERDRSD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFT +L + L G+ +TLHVGAGTF+PVK EDTDDH
Sbjct: 164 YQTMFAREDGAVAAPTAALHFTPDLTAALAKAGVGTETLTLHVGAGTFLPVKAEDTDDHR 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G ID TA LN+ + GGR+++VGTTSLRLLE+AT E G+I+P++ T IFITP
Sbjct: 224 MHAEWGRIDQATADRLNAARQAGGRLIAVGTTSLRLLESATDEHGVIHPFADETRIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRFRAVD LM+NFHLPKSTL MLVSA G E + Y HAI+ YRFYSYGD+SLL
Sbjct: 284 GYRFRAVDGLMTNFHLPKSTLFMLVSALMGRERMQAAYAHAIAQGYRFYSYGDSSLLL 341
>gi|312116034|ref|YP_004013630.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodomicrobium vannielii ATCC 17100]
gi|311221163|gb|ADP72531.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodomicrobium vannielii ATCC 17100]
Length = 391
Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 181/355 (50%), Positives = 241/355 (67%), Gaps = 6/355 (1%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP S IALRP PRD+ARL+ V P + P +S+ + DLPAF D +VFN
Sbjct: 30 LTDFDFELPKSAIALRPASPRDAARLLRVDP--AAPQPLSEATIRDLPAFFRPGDIMVFN 87
Query: 63 NTKVITAQLNGVRFCH-INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+T+V++A+L+G R + ++S L R + SW +ARP++ ++ GD +HF +
Sbjct: 88 DTRVLSAELSGTRPPRDADAPAVDVSLNLIEREASGSWKAFARPARRLRPGDAIHFETGG 147
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
SRL V+ K + GEI L + G +E + G +PLPPYIAR+RP D RD DYQ
Sbjct: 148 HASRL--IVVAKSDEGEITLA-APDGDSVEAIMQRHGAMPLPPYIARQRPADERDRSDYQ 204
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ +G+VAAPTAGLHFT LL+RL GI+ FVTLHVGAGTF+PVK E +DH +H
Sbjct: 205 TVFARNEGAVAAPTAGLHFTPELLARLAERGIETAFVTLHVGAGTFLPVKSETVEDHEIH 264
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E I TA+A+N+ + RGGRI++ GTTSLR+LETAT EDG I P GFT IFI PG+
Sbjct: 265 AEWFEIGDATARAINAARERGGRIIAAGTTSLRVLETATREDGFIEPAKGFTRIFIKPGH 324
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
FR+ D+L++NFHLPKSTL MLV AF G + K+ Y HA+ +RFYSYGD LL
Sbjct: 325 CFRSADLLVTNFHLPKSTLFMLVCAFSGTDLMKRAYAHAVEAGFRFYSYGDACLL 379
>gi|148552954|ref|YP_001260536.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas wittichii RW1]
gi|166218743|sp|A5V282|QUEA_SPHWW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148498144|gb|ABQ66398.1| Queuosine biosynthesis protein [Sphingomonas wittichii RW1]
Length = 344
Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 190/358 (53%), Positives = 237/358 (66%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSAR+++V + ++D VSDLP L D +V
Sbjct: 1 MRVDLFDFDLPPENIALRPASPRDSARMLLVEGSEGA---LADRHVSDLPGLLRVGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E I TLH R W + R +K ++ GD + F +
Sbjct: 58 FNDTRVIPAQLEG------RRGEARIGATLHKREGLRQWRAFVRNAKRVRTGDRIDFGAG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A ++ G ILL F G E +E + GT+PLPPYIA KRP D RD D
Sbjct: 112 -----VSAIAAERGEDGSILLDFE--GDEPVELLLERAGTMPLPPYIAGKRPTDDRDRDD 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ +G+VAAPTA LHFT L+ L + GI +TLHVGAGTF+PVK +DTDDH
Sbjct: 165 YQTMFAREKGAVAAPTAALHFTPRLMEALAAAGIASETLTLHVGAGTFLPVKADDTDDHR 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G IDA TA LN++++ GGR+++VGTTSLRLLE+AT EDG+I P+ G T IFITP
Sbjct: 225 MHAEWGRIDAATADHLNAIRAAGGRVIAVGTTSLRLLESATGEDGVIRPFDGDTAIFITP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRFRA+D LM+NFHLPKSTL MLVSA G + + Y HAI+ YRFYSYGD+SLL
Sbjct: 285 GYRFRAIDGLMTNFHLPKSTLFMLVSALMGRDRMQAAYAHAIAEGYRFYSYGDSSLLL 342
>gi|85373945|ref|YP_458007.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Erythrobacter litoralis HTCC2594]
gi|122544578|sp|Q2NAT1|QUEA_ERYLH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|84787028|gb|ABC63210.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter
litoralis HTCC2594]
Length = 347
Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 190/357 (53%), Positives = 234/357 (65%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PRDSARL+V + I D +V DLP L D +V
Sbjct: 1 MRVDLFDFELPQELIALRPAVPRDSARLLVA----AGAGAIDDRIVRDLPQLLMPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E + TLH R+ W + R +K + GD + F +
Sbjct: 57 FNDTRVIPAQLTG------KRGEATVGVTLHKRLDLRRWQAFVRNAKRLAPGDTVDFGND 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A V D+ + G F+ G E +E + GT+PLPPYIA KR D RD D
Sbjct: 111 -----VSADVEDRADDGS--FTFAFRGDEPVEVLLDRAGTMPLPPYIAGKRATDERDRDD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFTS L++ L G+ +TLHVGAGTF+PVK +DTDDH
Sbjct: 164 YQTMFAREDGAVAAPTAALHFTSELIAALDERGVARQTLTLHVGAGTFLPVKADDTDDHR 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE G I+ TA LN+ KSRGGRI++VGTTSLRLLE+AT EDG+I ++G T+IFITP
Sbjct: 224 MHSEWGRIEHDTADRLNAAKSRGGRIIAVGTTSLRLLESATGEDGVIRTFAGDTDIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRFRAVD LM+NFHLPKSTL+MLVSA G E +Y HAI+ YRFYSYGD+SLL
Sbjct: 284 GYRFRAVDGLMTNFHLPKSTLMMLVSALMGRERMMDIYAHAIAQRYRFYSYGDSSLL 340
>gi|332187845|ref|ZP_08389579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas sp. S17]
gi|332012195|gb|EGI54266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas sp. S17]
Length = 345
Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 184/358 (51%), Positives = 237/358 (66%), Gaps = 19/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LPP RIAL P PRDSAR++V+ + + D VSDLP L + D +V
Sbjct: 1 MNVDLFDFALPPERIALYPASPRDSARMLVLDGDAT-----RDERVSDLPQALRAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R + +I TLH R W + R +K +++GD++ F
Sbjct: 56 FNDTRVIPAQLQG------TRGDAKIGATLHKREGVRRWRAFIRNAKRLREGDVIDF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + AT D+ G L F+ G E +E + GT+PLPPYIA+KR + +D D
Sbjct: 107 --GAGVSATANDRAEDGSFALDFA--GDEPVELLLERAGTMPLPPYIAQKRGVTEKDAED 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFT LL L + GI+ +TLHVGAGTF+PVK +DT DH
Sbjct: 163 YQTMFAQEPGAVAAPTAALHFTPGLLESLAAAGIEHATLTLHVGAGTFLPVKADDTVDHK 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G IDA TA LN+VK+RGGR+++VGTTSLRL+E+A EDG+I P+ G T IFITP
Sbjct: 223 MHAEWGRIDAATAHRLNAVKARGGRVIAVGTTSLRLIESAAGEDGVIRPFEGDTAIFITP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRFR +D LM+NFHLP+STL MLVSA G++ + Y HAI+ YRFYSYGD SLL
Sbjct: 283 GYRFRGIDGLMTNFHLPRSTLFMLVSALMGLDRMQAAYAHAIAQGYRFYSYGDASLLL 340
>gi|294013326|ref|YP_003546786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sphingobium
japonicum UT26S]
gi|292676656|dbj|BAI98174.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sphingobium
japonicum UT26S]
Length = 344
Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 187/358 (52%), Positives = 233/358 (65%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PR SARL++ + P D +V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPESIALRPASPRHSARLLLAAGD--APF--QDRIVRDLPGLLRPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + +I TLH R+ W + R +K ++ GD + F +
Sbjct: 57 FNDTKVIPAQLEGMRG------QAKIGATLHKRLGLRQWQAFLRNAKRVRDGDRIDFGNG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A + G ++L F G E +E + G +PLPPYIA KRP D RD D
Sbjct: 111 -----VTAVAGPRDEEGGVMLRFE--GEEPVELLLERAGRMPLPPYIASKRPTDERDRSD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFT L++ + GI +TLHVGAGTF+PVK EDTDDH
Sbjct: 164 YQTMFAREDGAVAAPTAALHFTPELMTAIEKAGIGTETLTLHVGAGTFLPVKAEDTDDHH 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G ID TA LN+ ++ GGR+++VGTTSLRLLE+AT EDGII P+ T IFITP
Sbjct: 224 MHAEWGRIDQATAGRLNAARAAGGRLIAVGTTSLRLLESATGEDGIIRPFEDETRIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRFRAVD LM+NFHLPKSTL MLVSA G E+ + +Y+HAI YRFYSYGD+SLL
Sbjct: 284 GYRFRAVDGLMTNFHLPKSTLFMLVSALMGTEKMQSVYRHAIDGGYRFYSYGDSSLLL 341
>gi|85708532|ref|ZP_01039598.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter sp.
NAP1]
gi|85690066|gb|EAQ30069.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter sp.
NAP1]
Length = 345
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 188/358 (52%), Positives = 239/358 (66%), Gaps = 15/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRPV PRD+AR++VV + PL +DH VSDLP L D +V
Sbjct: 1 MRVDLFDFELPQERIALRPVRPRDAARMLVVEGS-QGPL--ADHGVSDLPCLLRPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R + E +I TLH R+ W + R +K +K+GD L F
Sbjct: 58 FNDTRVIPAQLEGRR----SGGEAKIGATLHKRIDLRRWQAFIRNAKRVKEGDHLVFGGG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A + G + L+F G E +E + GT+PLPPYIA++R +D +D D
Sbjct: 114 -----VTAIAEKRHRDGSMTLLFE--GTEPVEVLLDRAGTMPLPPYIAQRRGVDDQDQSD 166
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTA LHFT+ L+S L GIK +TLHVGAGTF+PVK EDT DH
Sbjct: 167 YQTMFAAEDGAVAAPTASLHFTTRLVSALDHAGIKREMLTLHVGAGTFLPVKAEDTKDHQ 226
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE G I+A TA +N ++ GGR+++VGTTSLRLLE+A EDG + ++G T+IFITP
Sbjct: 227 MHSEFGRINAGTASRINEARAAGGRVIAVGTTSLRLLESAAGEDGKLREFAGDTDIFITP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY FR VD LM+NFHLPKSTL+MLVSA G E + Y+HAI+ YRFYSYGD+SLL
Sbjct: 287 GYPFRVVDGLMTNFHLPKSTLMMLVSALMGRERMMEAYEHAIAQNYRFYSYGDSSLLL 344
>gi|115524776|ref|YP_781687.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisA53]
gi|122296024|sp|Q07MX7|QUEA_RHOP5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115518723|gb|ABJ06707.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisA53]
Length = 358
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/362 (51%), Positives = 244/362 (67%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRP PRD+AR++VV + + + D +VS+LP +L DA+V
Sbjct: 1 MRTDLFDFDLPQGAIALRPASPRDAARMLVVEASGA----LHDRVVSELPEWLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL G R E +I TL R+ + W +P+K + GDI+ F
Sbjct: 57 VNDTKVIAAQLTGRRIGRDT--EPKIDATLIKRLDGSRWQALVKPAKKLLPGDIVRF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ +L+ATV K GEI+L F++ G L++ I+ +G PLPPYIA KR D RD
Sbjct: 114 DGRVCLLGQLDATVEAKGEAGEIILAFTLHGPVLDQAIAELGAPPLPPYIASKRAPDDRD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L L + G+ ++ VTLHVGAGTF+PVK EDT
Sbjct: 174 AADYQTMFAANEGAVAAPTAGLHFTKALEQALAARGVTLHRVTLHVGAGTFLPVKTEDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G + TA ALN+ ++ GRIV+VGTTSLRLLE+A +DG + P++ T IF
Sbjct: 234 EHKMHAEWGCLSRETADALNAARAADGRIVAVGTTSLRLLESAAGDDGRLAPFADDTAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRF+AVD+LM+NFHLP+STL MLVSAF G++ ++ Y HAI YRFYSYGD LL
Sbjct: 294 ITPGYRFKAVDVLMTNFHLPRSTLFMLVSAFAGLDTMQRAYAHAIKSGYRFYSYGDACLL 353
Query: 357 FQ 358
F+
Sbjct: 354 FR 355
>gi|103487672|ref|YP_617233.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingopyxis alaskensis RB2256]
gi|122984871|sp|Q1GR22|QUEA_SPHAL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|98977749|gb|ABF53900.1| Queuosine biosynthesis protein [Sphingopyxis alaskensis RB2256]
Length = 351
Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 184/361 (50%), Positives = 239/361 (66%), Gaps = 19/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRD+AR++VV I D V DLP +L D +V
Sbjct: 1 MRVDAFDFDLPSERIALRPARPRDAARMLVVDAG-----NIVDAGVRDLPQWLRPGDCLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G+R E +I TLH R+ W + R +K ++ G+ + F S
Sbjct: 56 FNDTRVIPAQLEGLRG------EAKIGATLHKRIDLRRWQAFVRNAKRLRVGETVDFGSG 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A ++ G +L F+ G E +E + GT+PLPPYIA KR D D D
Sbjct: 110 -----VAALAEERLADGSFVLAFA--GDEPVELLLERAGTMPLPPYIAGKRGADEADRDD 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFT LL+ L + GI +TLHVGAGTF+PVK +DTDDH+
Sbjct: 163 YQTMFAREDGAVAAPTAALHFTPELLAALAAAGIATETLTLHVGAGTFLPVKADDTDDHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G I+A TA LN+V++ GGR+++VGTTSLRLLE+A +DG I P++G T+IFITP
Sbjct: 223 MHAEWGRIEADTAARLNAVRASGGRVIAVGTTSLRLLESAARDDGTITPFAGDTSIFITP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYRF+A+D LM+NFHLP+STL MLVSA G+E + Y HAI+ YRFYSYGD SLL +
Sbjct: 283 GYRFKAIDGLMTNFHLPRSTLFMLVSALMGLETMQAAYAHAIAREYRFYSYGDASLLLPR 342
Query: 360 R 360
+
Sbjct: 343 Q 343
>gi|83591621|ref|YP_425373.1| queuosine biosynthesis protein [Rhodospirillum rubrum ATCC 11170]
gi|91207400|sp|Q2RXQ9|QUEA_RHORT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|83574535|gb|ABC21086.1| Queuosine biosynthesis protein [Rhodospirillum rubrum ATCC 11170]
Length = 345
Score = 348 bits (893), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 188/356 (52%), Positives = 235/356 (66%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IA+RP PRDSARL++V D V DLP L+ D +V
Sbjct: 1 MRVDLFDFDLPRDLIAVRPAVPRDSARLLLVEGESR-----RDLGVGDLPGLLDPGDILV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G I + + TLH RV P++W +ARP++ +K G ++ F
Sbjct: 56 FNDTRVIPARLKG----RIG--DGGVEVTLHKRVGPDAWDCFARPARKLKPGVVILF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV + GE L F +G L + G IPLPPYI KRP DARD DY
Sbjct: 107 --AEGFTATVAARGEDGEATLRFDRAGAALMAALEAYGHIPLPPYI--KRPDDARDRADY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHFT LL+ L + G+ VTLHVGAGTF+PVKVEDTDDH M
Sbjct: 163 QTIYAREDGAVAAPTAGLHFTPALLAALEARGVSRAMVTLHVGAGTFLPVKVEDTDDHRM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A TA+A+N+ ++ GG++V+VGTT++RLLE+AT D +I P+ G T+IFITPG
Sbjct: 223 HAETGTLTAQTAEAINAARAAGGKVVAVGTTAMRLLESATGADKVIRPFHGDTSIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF AVD LM+NFHLP+STL MLVSAF G + Y HAIS YRFYSYGD+SLL
Sbjct: 283 YRFNAVDRLMTNFHLPRSTLFMLVSAFAGASRMRNAYAHAISQGYRFYSYGDSSLL 338
>gi|144900483|emb|CAM77347.1| Queuosine biosynthesis protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 345
Score = 348 bits (892), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 180/356 (50%), Positives = 234/356 (65%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IA RPV PRD+ARL+ V ++D +V DLP +L D ++
Sbjct: 1 MDVNLFDFDLPRTLIAERPVSPRDAARLLHVQAG-----GLTDGVVGDLPRWLRPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + E I TLH R S + W +ARP+K ++ GD + F
Sbjct: 56 SNDTRVIPARLFG------RKGEGGIELTLHERTSLDEWKAFARPAKKLRPGDEVRFADD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV K GE+L+ F G +L + G +PLPPYI RK D RD DY
Sbjct: 110 -----FSATVAAKGEAGEVLMRFDRGGDDLMLALDAYGRLPLPPYI-RKGEADERDRADY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT LL+ L S G+ +TLHVGAGTF+PVKV+DT DH M
Sbjct: 164 QTVFAREKGAVAAPTAGLHFTDALLTALESAGVTRTTITLHVGAGTFLPVKVDDTKDHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A A +N K+ GGR+V+VGTTSLRLLE+A +DG+++P+ G T+IFITPG
Sbjct: 224 HAERGVVTAEVADLVNRTKAAGGRVVAVGTTSLRLLESAADDDGVLHPFDGPTDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD+LM+NFHLPKSTL MLVSAF G++ + Y +A++ YRFYSYGD LL
Sbjct: 284 YRFRLVDVLMTNFHLPKSTLFMLVSAFAGLDRMHQAYAYAMNRGYRFYSYGDACLL 339
>gi|56551748|ref|YP_162587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ZM4]
gi|81598273|sp|Q5NP84|QUEA_ZYMMO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56543322|gb|AAV89476.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ZM4]
Length = 342
Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/359 (50%), Positives = 232/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQEMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEG------KKNQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ + A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 107 -GQD-VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIESAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|5834352|gb|AAD53918.1|AF179611_2 S-adenosylmethionine tRNA ribosyltransferase [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 342
Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 232/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQEMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEG------KKNQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ + A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 107 -GQD-VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+++A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIDSAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|94497297|ref|ZP_01303868.1| Queuosine biosynthesis protein [Sphingomonas sp. SKA58]
gi|94423160|gb|EAT08190.1| Queuosine biosynthesis protein [Sphingomonas sp. SKA58]
Length = 344
Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 235/361 (65%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSARL+ + P I D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFDLPPDNIALRPASPRDSARLLAA----AGPSGIEDRTVRDLPSLLRAGDMLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E I TLH R+ W + R +K +++GD + F +
Sbjct: 57 FNDTRVIPAQLEG------RRGEARIGATLHKRIGLRQWQAFLRNAKRVREGDRIEFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A + G + L F G E +E + GT+PLPPYIA KRP D +D D
Sbjct: 111 -----VTAIAGARDEDGGVTLEFE--GDEPVEILLERAGTMPLPPYIASKRPTDEQDRSD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFT L+ + + G+ +TLHVGAGTF+PVK +DTDDH
Sbjct: 164 YQTMFAREDGAVAAPTAALHFTPELMDAIAAAGVLTQTLTLHVGAGTFLPVKAQDTDDHR 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G IDA A LN+ ++ GGR+++VGTTSLRLLE+A EDG+I P++ T IFITP
Sbjct: 224 MHAEWGRIDAAAADRLNAARAAGGRLIAVGTTSLRLLESAAGEDGVIRPFADETRIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYRFRAVD LM+NFHLPKSTL MLVSA G E + +Y HAI+ YRFYSYGD+SLL +
Sbjct: 284 GYRFRAVDGLMTNFHLPKSTLFMLVSALMGRERMQAIYAHAIAQGYRFYSYGDSSLLLPE 343
Query: 360 R 360
+
Sbjct: 344 K 344
>gi|83858653|ref|ZP_00952175.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanicaulis alexandrii HTCC2633]
gi|83853476|gb|EAP91328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanicaulis alexandrii HTCC2633]
Length = 357
Score = 345 bits (884), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 226/363 (62%), Gaps = 14/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP RIALRP PRDSARL+ V +SD V DLP L D +V
Sbjct: 4 MRLSDFDFHLPEDRIALRPARPRDSARLLQVKDG-----GLSDLGVLDLPNLLEPGDLLV 58
Query: 61 FNNTKVITAQLNGVR--FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI A L GVR H EI LH R W + RP+K +K+GD LHF
Sbjct: 59 FNDTRVIPAALTGVRPARAHGGGGGVEIEINLHKRDDEAVWRAFVRPAKRLKEGDTLHF- 117
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A V +K GE++L F +G+EL++ I G PLPPYIA KR DA D
Sbjct: 118 ----KGGLTAEVREKREGGEVVLTFDRAGVELDKAIVEAGAPPLPPYIASKRAADAADLE 173
Query: 179 DYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA GSVAAPTAGLHFT L + L + GIK VTLHVGAGTF+PVK ED
Sbjct: 174 DYQTVYAAPDKAGSVAAPTAGLHFTDRLFAALDARGIKRTHVTLHVGAGTFLPVKTEDLS 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E + A+ +N + GGRI++VGTTS+R LE+A EDG + + T IF
Sbjct: 234 EHQMHAEWYSVSEEAARTINETRKAGGRIIAVGTTSIRTLESAAEEDGTVRAEARDTAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG RF+ +D LM+NFHLPKSTL MLVSA G E+ Y HAI YRF+SYGD+SLL
Sbjct: 294 ITPGCRFKVIDALMTNFHLPKSTLFMLVSALAGFEDMHAAYAHAIREHYRFFSYGDSSLL 353
Query: 357 FQK 359
++K
Sbjct: 354 WRK 356
>gi|149184807|ref|ZP_01863125.1| Queuosine biosynthesis protein [Erythrobacter sp. SD-21]
gi|148832127|gb|EDL50560.1| Queuosine biosynthesis protein [Erythrobacter sp. SD-21]
Length = 342
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/358 (51%), Positives = 233/358 (65%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRD+AR++VV + P +D V DLPA L+ D +V
Sbjct: 1 MKVDLFDFELPNERIALRPARPRDAARMLVVRG--AEPF--ADRTVLDLPAMLDPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E +I TLH RV W + R +K ++ G+I F
Sbjct: 57 FNDTRVIPAQLEG------RRGEAKIGATLHKRVDLRRWQAFIRNAKRLRVGEIATF--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A ++ G +L F G E +E + GT+PLPPYIA KR DA+D D
Sbjct: 108 --GGGVTALAEERLADGSFILFFE--GEEPVEVLLERAGTMPLPPYIAGKRATDAQDRED 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +AK G+VAAPTA LHFT L+ L GI +TLHVGAGTF+PVK +DT+DH
Sbjct: 164 YQTMFAKEDGAVAAPTAALHFTDRLMGALAERGIGTETLTLHVGAGTFLPVKADDTEDHQ 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G I+ TA LN+V++ G R+++VGTTSLRLLE+AT ED +I P++G T+IFITP
Sbjct: 224 MHAEWGRIEQDTADRLNAVRAGGNRVIAVGTTSLRLLESATGEDKVIRPFAGDTDIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY FRA+D LM+NFHLPKSTL MLV A G E + Y HAI+ YRFYSYGD+SLL
Sbjct: 284 GYSFRAIDGLMTNFHLPKSTLFMLVGALMGRERMQAAYAHAIATEYRFYSYGDSSLLL 341
>gi|241762411|ref|ZP_04760490.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|241373098|gb|EER62747.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 342
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 232/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQGMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEG------KKNQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ + A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 107 -GQD-VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIESAADEMGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFQVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|260752680|ref|YP_003225573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552043|gb|ACV74989.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
Length = 342
Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 231/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQGMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEG------KKNQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ + A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 107 -GQD-VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KV+D+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVDDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA +N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANVINETKKQGGRVIATGTTSLRLIESAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|288958938|ref|YP_003449279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azospirillum sp. B510]
gi|288911246|dbj|BAI72735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azospirillum sp. B510]
Length = 342
Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 182/358 (50%), Positives = 233/358 (65%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLPP RIA PV PRD+ARL+ V +L D +V DLPA L D +V
Sbjct: 1 MKTADFDFDLPPDRIAEHPVRPRDAARLLEVGSSLR------DLIVRDLPALLQPGDLMV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R E + TLH R+ W+ +++P K +K GD + ++
Sbjct: 55 VNDTRVIPARLDG------RRGEVAVEITLHKRLGERDWATFSKPGKRLKPGDTI-VIAE 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + + A + E+ L FS G +L + G +PLPPYI RK DA D DY
Sbjct: 108 DFSAEVTAK-----DGMEVRLRFSAGGADLMEALHRHGRMPLPPYIRRK--ADAGDNADY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A +G+VAAPTAGLHFT++LL+ L + G++ VTLHVGAGTF+PVKV+D DH M
Sbjct: 161 QTVFAAREGAVAAPTAGLHFTADLLAALDARGVRRVPVTLHVGAGTFLPVKVDDIADHKM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I TA A+N + GGRIVSVGTT+LR+LETA DG + P+SG T+IFITPG
Sbjct: 221 HSEWGEISPETAAAVNETRKAGGRIVSVGTTALRILETAGRPDGTLVPFSGDTDIFITPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR VD+L +NFHLPKSTL MLV AF G + + Y HAI H YRF+SYGD SLL +
Sbjct: 281 YRFRIVDLLWTNFHLPKSTLFMLVCAFAGYDRMRAAYAHAIDHDYRFFSYGDASLLHR 338
>gi|87200264|ref|YP_497521.1| queuosine biosynthesis protein [Novosphingobium aromaticivorans DSM
12444]
gi|123488975|sp|Q2G636|QUEA_NOVAD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|87135945|gb|ABD26687.1| Queuosine biosynthesis protein [Novosphingobium aromaticivorans DSM
12444]
Length = 342
Score = 341 bits (875), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 181/358 (50%), Positives = 230/358 (64%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PRDSARL+ V P D +V DLP LN D +V
Sbjct: 1 MRVDLFDFELPSENIALRPARPRDSARLLGV--GRDGPF--RDLIVRDLPDLLNPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E + TLH R+ W + R +K +++GD++ F +
Sbjct: 57 FNDTRVIPAQLEG------QRGEARVGATLHKRIDLRRWQAFVRNAKRLREGDVIQFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ AT + G L F G E +E + G +PLPPYIA KRP D +D D
Sbjct: 111 -----VTATAEMRLPDGSWTLFFP--GEEPVEVLLERAGRMPLPPYIAGKRPTDEQDRED 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTA LHFT +L+ L + G+ +TLHVGAGTF+PVK +DT DH
Sbjct: 164 YQTMFAAKDGAVAAPTAALHFTPSLMEALAARGVATETLTLHVGAGTFLPVKADDTQDHQ 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G IDA TA LN+ ++ G R+++VGTTSLRLLE+AT ED +I P+ G T+IFITP
Sbjct: 224 MHAEWGTIDAATADRLNAARAAGKRVIAVGTTSLRLLESATGEDRVIRPFEGDTSIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY FRA+D LM+NFHLPKSTL MLVSA G++ + Y HAI+ YRFYSYGD+SLL
Sbjct: 284 GYTFRAIDGLMTNFHLPKSTLFMLVSALMGLDRMQAAYAHAIAGGYRFYSYGDSSLLL 341
>gi|326387409|ref|ZP_08209018.1| queuosine biosynthesis protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326208065|gb|EGD58873.1| queuosine biosynthesis protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 342
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/358 (51%), Positives = 224/358 (62%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PRDSARL+ V P + D V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPERIALRPARPRDSARLLHV-PGKGA---LGDLHVRDLPGLLRKGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G+R + I TLH R W + R K + GD + F
Sbjct: 57 FNDTRVIPAQLEGMRG------QARIGATLHKREDLRRWQAFVRNGKRLSPGDTIDF--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ + + + G L F G E +E + G +PLPPYIA KRP DA D D
Sbjct: 108 -GEGVMALAEV-RHPDGSWTLAFQ--GDEPVEILLERAGRMPLPPYIASKRPTDAADRQD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTA LHFT LL L GI +TLHVGAGTF+PVK EDT DH
Sbjct: 164 YQTMFAARDGAVAAPTAALHFTPGLLEALADAGIGHETLTLHVGAGTFLPVKAEDTSDHA 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E G I+ TA LN+V++ GGR+++VGTTSLRLLE+A ED +I P++G T+IFITP
Sbjct: 224 MHPEWGRIEQETADRLNAVRAGGGRVIAVGTTSLRLLESAAGEDRVIRPFAGDTSIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY FRA+D LM+NFHLPKSTL MLVSA G++ ++ Y HAI YRFYSYGD SLL
Sbjct: 284 GYTFRAIDGLMTNFHLPKSTLFMLVSALMGLDRMQEAYAHAIREGYRFYSYGDASLLL 341
>gi|154253493|ref|YP_001414317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvibaculum lavamentivorans DS-1]
gi|171769669|sp|A7HXM7|QUEA_PARL1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154157443|gb|ABS64660.1| Queuosine biosynthesis protein [Parvibaculum lavamentivorans DS-1]
Length = 350
Score = 335 bits (858), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 183/357 (51%), Positives = 233/357 (65%), Gaps = 10/357 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IALRP PRDSAR++V+ P + ++D VSDLP+ L D +V
Sbjct: 1 MRVSDFDFDLPEELIALRPARPRDSARMLVIGPAENA---LADKSVSDLPSHLREGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G R I LH R S + W + RP+K + + + F
Sbjct: 58 FNDTKVIPARLFGTR--RRGEASARIEVMLHKRESADEWRAFLRPAKKLNLSETIDF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K GE L FS+SG L+ I+ G +PLPPYIARKR D D DY
Sbjct: 113 --PGGLSAAVEEKGEGGEAGLRFSLSGPALDAAIAAAGEMPLPPYIARKRAADDEDVADY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT L++ + + G+ +TLHVGAGTF+PV EDTD H M
Sbjct: 171 QTLHADEPGAVAAPTAGLHFTPALMAAIEARGVSTVRLTLHVGAGTFLPVTAEDTDTHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A A+N +++GGRIV+VGTTSLRLLE+A E G ++P+ G T+IFITPG
Sbjct: 231 HAERGEITEAEAAAINEARAKGGRIVAVGTTSLRLLESAVDEAGTVHPFRGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRFRAVD+LM+NFHLP+STL MLVSA EE K+ Y HA++ YRFYSYGD L++
Sbjct: 291 YRFRAVDVLMTNFHLPRSTLFMLVSALRSTEEMKRAYAHAVAEKYRFYSYGDACLIY 347
>gi|315499637|ref|YP_004088440.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Asticcacaulis excentricus CB 48]
gi|315417649|gb|ADU14289.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Asticcacaulis excentricus CB 48]
Length = 348
Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/362 (48%), Positives = 227/362 (62%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP RIALRPV PR++ARL+ V +V D V DLP+ L + D +V
Sbjct: 1 MKVSDFDFDLPEDRIALRPVTPREAARLLRVDG-----VVREDWRVGDLPSLLKAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNT+V+ QL G R RE + TL + W + +P + I++GD L F
Sbjct: 56 INNTRVLPTQLKGTRV-----REGQTVAFEATLIKSLDGQRWQAFLKPGRRIREGDTLRF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L A V+ K G +L F + E+ + +G +PLPPYI KRP D +D
Sbjct: 111 ------DDLSARVLSKDEDGVYVLRFEQAASEVLNGLHRLGGMPLPPYIRSKRPEDEQDK 164
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A+ +GSVAAPTAGLHFT LL L G+ VTLHVGAGTF+PVKVEDT D
Sbjct: 165 SDYQTVFARDEGSVAAPTAGLHFTPELLQALRDKGVLFEEVTLHVGAGTFLPVKVEDTKD 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A +A +N+ + GGRI+++GTT+LRL+E+A DG I+P+SG T+IFI
Sbjct: 225 HRMHAEFGVVSADSAARINAARVAGGRIIAIGTTALRLIESACDADGRIHPFSGDTDIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG R+ D+L +NFHLPKSTL MLV AF G E K Y HAI+ YRF+SYGD SLL
Sbjct: 285 TPGVPVRSADMLWTNFHLPKSTLFMLVCAFAGTEAMKAAYAHAINSGYRFFSYGDASLLT 344
Query: 358 QK 359
K
Sbjct: 345 NK 346
>gi|23016644|ref|ZP_00056398.1| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase) [Magnetospirillum magnetotacticum
MS-1]
Length = 345
Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 183/358 (51%), Positives = 234/358 (65%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV--ISDHLVSDLPAFLNSNDA 58
M V +FDF+LP IA RPV PRDSARL+ V P++ +SD V DLP L D
Sbjct: 1 MRVDDFDFELPRELIAERPVCPRDSARLLHV------PIIGGLSDRGVRDLPDLLMPGDI 54
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKVI A+L G R + TLH R W +ARP+K ++ GD + F
Sbjct: 55 LVFNDTKVIPARLFG------RRGTAGVEVTLHQRTGLAQWKAFARPAKKLRPGDRVDF- 107
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
ATV +K GE+ L F SG +L + G++PLPPYI RK D RD
Sbjct: 108 ----AEGFFATVAEKGEMGEVTLDFDRSGEDLMVALEAFGSLPLPPYI-RKGEADERDRG 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTAGLHFT +LL+ L + G+K VTLHVGAGTF+PVK +DT+DH
Sbjct: 163 DYQTVFARQKGAVAAPTAGLHFTPDLLAALDARGVKRATVTLHVGAGTFLPVKADDTNDH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH EIG I TA A+N+ K+ GGR+V+VGTTS RLLE+A GI++P+ G T+IFIT
Sbjct: 223 RMHQEIGVITPETAAAINAAKAAGGRVVAVGTTSARLLESAADPLGILHPFDGATDIFIT 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D+L++NFHLP+STL MLVSAF G+ K+ Y+HA + YRFYSYGD LL
Sbjct: 283 PGHSFRLADVLLTNFHLPRSTLFMLVSAFSGLSRMKEAYEHAKAAGYRFYSYGDCCLL 340
>gi|91207425|sp|Q5FR06|QUEA_GLUOX RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 347
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 224/351 (63%), Gaps = 15/351 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP IA P PRDSA L+ V P L H++ DLP FL D ++ NNT
Sbjct: 8 FDFELPRDHIATEPARPRDSATLLHVRPGLPP----DPHVIRDLPDFLREGDLLIANNTA 63
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI AQL R E +I TL ++ SW AR S+ +K DILHF G
Sbjct: 64 VIRAQLAATR------GEAKIGLTLDRILANGSWHALARNSRKLKPQDILHF----GDDP 113
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ ATVI+ G + + FS+ G E + + VG + LPPYI R +D DY+T ++
Sbjct: 114 VTATVIENEGDGAVSIRFSVEGDEFDAFLERVGALALPPYIERPFGPTKQDDADYRTIFS 173
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
+ +G+VAAPTAGLHFT +L+ L + GI+ +TLHVGAGTF+PV+ +H MH+E G
Sbjct: 174 QYRGAVAAPTAGLHFTPEVLAALDAKGIQRRTLTLHVGAGTFLPVR-STIAEHKMHAEWG 232
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
IDA TA A+N ++RGGRIV+VGTTSLRLLE+A EDG + PW G T+IFI PGYRF+A
Sbjct: 233 EIDAETAAAINETRARGGRIVAVGTTSLRLLESAAREDGTVAPWRGETSIFIKPGYRFKA 292
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD+LM+NFHLP+STL MLV AF G E ++ Y +AI++ RFYSYGD LL
Sbjct: 293 VDVLMTNFHLPRSTLFMLVCAFSGTETMREAYAYAIANGLRFYSYGDACLL 343
>gi|58039882|ref|YP_191846.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconobacter oxydans 621H]
gi|58002296|gb|AAW61190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconobacter oxydans 621H]
Length = 357
Score = 325 bits (834), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 224/351 (63%), Gaps = 15/351 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP IA P PRDSA L+ V P L H++ DLP FL D ++ NNT
Sbjct: 18 FDFELPRDHIATEPARPRDSATLLHVRPGLPP----DPHVIRDLPDFLREGDLLIANNTA 73
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI AQL R E +I TL ++ SW AR S+ +K DILHF G
Sbjct: 74 VIRAQLAATR------GEAKIGLTLDRILANGSWHALARNSRKLKPQDILHF----GDDP 123
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ ATVI+ G + + FS+ G E + + VG + LPPYI R +D DY+T ++
Sbjct: 124 VTATVIENEGDGAVSIRFSVEGDEFDAFLERVGALALPPYIERPFGPTKQDDADYRTIFS 183
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
+ +G+VAAPTAGLHFT +L+ L + GI+ +TLHVGAGTF+PV+ +H MH+E G
Sbjct: 184 QYRGAVAAPTAGLHFTPEVLAALDAKGIQRRTLTLHVGAGTFLPVR-STIAEHKMHAEWG 242
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
IDA TA A+N ++RGGRIV+VGTTSLRLLE+A EDG + PW G T+IFI PGYRF+A
Sbjct: 243 EIDAETAAAINETRARGGRIVAVGTTSLRLLESAAREDGTVAPWRGETSIFIKPGYRFKA 302
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD+LM+NFHLP+STL MLV AF G E ++ Y +AI++ RFYSYGD LL
Sbjct: 303 VDVLMTNFHLPRSTLFMLVCAFSGTETMREAYAYAIANGLRFYSYGDACLL 353
>gi|83952643|ref|ZP_00961373.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
nubinhibens ISM]
gi|83835778|gb|EAP75077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
nubinhibens ISM]
Length = 348
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/356 (47%), Positives = 229/356 (64%), Gaps = 11/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RPV PR +ARL+V I D V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEELIATRPVRPRPAARLLVAEGA-----AIRDAHVRDLGQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L+G+R + I TL W +P K +++G+++ F
Sbjct: 56 LNDTKVIPARLSGLRHREGSEAGARIEVTLLEPDGQGQWGALIKPLKKLREGEVVAF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L AT++ K + G+ LL F++ G + + ++ G +PLPPYIA KRP DA+D+ DY
Sbjct: 113 --AAGLSATLVAK-SEGQGLLRFNLEGDDFDAALAEAGAMPLPPYIAAKRPADAQDHEDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHF LL+ L G+++ VTLHVGAGTF+PVKVED H M
Sbjct: 170 QTVFARNKGAVAAPTASLHFDEALLAALRGQGVEMTHVTLHVGAGTFLPVKVEDVTTHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + ++ GGRI+ VGTT+LRL+ETA+ E G I PW G T+IFI PG
Sbjct: 230 HAEWGEVSEKAAAEIAATRAAGGRIIPVGTTALRLIETASRETGEIAPWQGETDIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ FRA D LM+NFHLPKSTL+MLVSA G + ++Y+HAI+ YRF+SYGD SLL
Sbjct: 290 FTFRATDALMTNFHLPKSTLMMLVSALMGKDRMARVYEHAIAEKYRFFSYGDASLL 345
>gi|126726330|ref|ZP_01742171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2150]
gi|126704193|gb|EBA03285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2150]
Length = 359
Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 228/358 (63%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +++FDLP + IA RP PR +AR++ V + S L V+DL LN+ D +V
Sbjct: 1 MKLSDYNFDLPETLIATRPAVPRTAARMLHVAGDDSVDLS-----VTDLTDLLNAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCH--INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NNTKVI A+L G RF +I TL + W +P K +K+G+ + F
Sbjct: 56 LNNTKVIPARLFGQRFRQGDAGATSAKIEMTLLSPTTDGHWQALVKPLKKVKEGEEVVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+L A +I K + G ++ F+ G + + ++ VG +PLPPYIA KR D +D++
Sbjct: 115 ----SEKLSAKLISKAD-GMSVVAFNQQGRDFDEALAEVGKMPLPPYIAAKRAADQQDHI 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL ++ + G+ + +VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVFAQTTGAVAAPTASLHFDQELLDKIRAKGVNITYVTLHVGAGTFLPVKVDDISQH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A+A+ +GGR++ VGTT+LRL+ETA E+G I+PW G T+IFI
Sbjct: 230 KMHSEWGEVTDGAAKAIMQTHEQGGRVIPVGTTALRLIETAADENGKISPWVGDTDIFIH 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ D LM+NFHLPKSTL+MLVSA G K++Y HAI H YRF+SYGD+SLL
Sbjct: 290 PGYEFKVTDALMTNFHLPKSTLMMLVSALMGQSRIKEVYSHAIEHKYRFFSYGDSSLL 347
>gi|148260342|ref|YP_001234469.1| queuosine biosynthesis protein [Acidiphilium cryptum JF-5]
gi|326403533|ref|YP_004283615.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acidiphilium multivorum AIU301]
gi|166216693|sp|A5FY68|QUEA_ACICJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146402023|gb|ABQ30550.1| Queuosine biosynthesis protein [Acidiphilium cryptum JF-5]
gi|325050395|dbj|BAJ80733.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acidiphilium multivorum AIU301]
Length = 345
Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 219/356 (61%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LPP RIA P PR +ARL+ V + + D + DLPA L D +V
Sbjct: 1 MNLADFDYHLPPERIAAEPARPRHAARLLHVRGD-----GLDDRTILDLPALLAPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R + I TL ++ +W V R ++ + G+ +
Sbjct: 56 VNDTRVIPAQLTG------RRGDARIGITLDRPLADGTWRVLLRNARRARPGETIAI--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + A VID+ G L F + ++ LPPYI R I +D DY
Sbjct: 107 DGAGGIAAEVIDRAPDGSATLRFDCDAETFRAMLDRAASLALPPYIPRPAGISEQDRQDY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A +G+VAAPTAGLHFT +L+ L + G+ + VTLHVGAGTF+PV+ + + H +
Sbjct: 167 QTMFAAEEGAVAAPTAGLHFTETVLAALAARGVGLATVTLHVGAGTFLPVREDQLERHKL 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I TA +N+ ++RGGRIV+VGTTSLR+LETA +DG + PW G T +FITPG
Sbjct: 227 HAERGLIGPETAALVNATRARGGRIVAVGTTSLRVLETAAGDDGTLAPWHGETELFITPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD LM+NFHLPKSTLLMLV+AF G+E + Y HAI+ YRFYSYGD SLL
Sbjct: 287 YRFKLVDRLMTNFHLPKSTLLMLVAAFAGVERMRAAYAHAIARGYRFYSYGDASLL 342
>gi|163792636|ref|ZP_02186613.1| Queuosine biosynthesis protein [alpha proteobacterium BAL199]
gi|159182341|gb|EDP66850.1| Queuosine biosynthesis protein [alpha proteobacterium BAL199]
Length = 349
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/363 (47%), Positives = 229/363 (63%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD+ LP RIA P PRD+ARL+ + + ++D ++DLP L D ++
Sbjct: 1 MRVDLFDYHLPEERIARFPANPRDTARLLDLTGDR-----LADRTIADLPDLLQPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R E ++ TLH R W +ARP+K ++ GD + F +Q
Sbjct: 56 ANDTRVIPARLDG------KRGEAKVEVTLHKRDGDAVWRAFARPAKKLRPGDRITF-AQ 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L A V K GE+ L F +G L ++ G +PLPPYI R+ D DY
Sbjct: 109 D----LTAEVTAKGEAGEVTLSFDTAGPALMEALAAYGRMPLPPYIKRQADEIQDDARDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT LL+R+ + G++ VTLHVGAGTF+PVKV+DT DH+M
Sbjct: 165 QTVFAARDGAVAAPTAGLHFTPELLARIEARGVRRALVTLHVGAGTFLPVKVDDTADHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE G + + TA A+ ++ GGR+V+ GTT+LR+LE A D + WSG T++F
Sbjct: 225 HSEWGSVPSETAAAVAETRAAGGRVVATGTTTLRILEAAAQTTAPGDDAVPAWSGETDLF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+L++NFHLP+STLLMLVSAF G E Y HAI YRF+SYGD LL
Sbjct: 285 ITPGYRFRAVDLLLTNFHLPRSTLLMLVSAFSGRERILAAYDHAIRTGYRFFSYGDACLL 344
Query: 357 FQK 359
++
Sbjct: 345 ARE 347
>gi|163731371|ref|ZP_02138818.1| S-adenosylmethionine [Roseobacter litoralis Och 149]
gi|161394825|gb|EDQ19147.1| S-adenosylmethionine [Roseobacter litoralis Och 149]
Length = 351
Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 171/361 (47%), Positives = 222/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V ISD +VSDLP +L+ D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPAVPRTSARLLVAKGQQ-----ISDSIVSDLPNWLSPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + + I TL + WS +P K +K G+ + F
Sbjct: 56 LNDTRVIPARLTGARHRDTAQGPMQARIEVTLLEPDARGDWSALIKPLKKVKIGEEIIF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT + G+ L F++ G + + ++ G +PLPPYIA +RP D RD
Sbjct: 115 ----SDVLRAT-LQSVTDGQGFLKFNLEGDDFDAALNAAGAMPLPPYIATRRPADERDKS 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LLS L + G+ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQNNGAVAAPTASLHFDEALLSELAARGVLFSYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K G R++ VGTT+LRL+ETA E G I W G T+IFI
Sbjct: 230 KMHAEWGQVSAVAAAEINATKQAGKRVIPVGTTALRLIETAGRE-GQITAWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RF D LM+NFHLPKSTL+MLVSA G +E + +Y HAI+ YRF+SYGD SLL
Sbjct: 289 PGFRFNVADALMTNFHLPKSTLMMLVSALMGYDEVRTIYNHAIAEKYRFFSYGDASLLIP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|126735609|ref|ZP_01751354.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. CCS2]
gi|126714796|gb|EBA11662.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. CCS2]
Length = 350
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 231/359 (64%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDFDLP S IA RP PR SARL+ L+ I D +V+ LP L D ++
Sbjct: 1 MKLSEFDFDLPDSLIATRPARPRSSARLL-----LAQGATIEDRIVNQLPDILQPGDRLI 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G+R ++ TL + SWS +P K ++ G+++ F
Sbjct: 56 LNDTKVIPARLFGLRHRSGEAGETAAKMDVTLLEPRADGSWSALIKPLKKVRDGEVI-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D LEA V + + G+ L F++ G + + ++ VG +PLPPYIA KR D D
Sbjct: 115 SDD----LEAEVTGRGD-GQGYLAFNLKGDDFDAALNAVGAMPLPPYIAGKRSADDADKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTYWARNSGAVAAPTASLHFDGPLLAALAARGVQFTHVTLHVGAGTFLPVKVDDVRDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K+ G R++ VGTT+LRL+E+A + G++ PW+G T+IFIT
Sbjct: 230 KMHAEWGEVTADAAAEINATKAAGHRVIPVGTTALRLIESA-AQRGVMQPWTGPTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F+ D LM+NFHLPKSTL+MLVSA G + + +Y HAI+ YRF+SYGD+SLL
Sbjct: 289 PGFQFQMADGLMTNFHLPKSTLMMLVSALMGTDTIRAIYAHAIAQNYRFFSYGDSSLLL 347
>gi|110680196|ref|YP_683203.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
denitrificans OCh 114]
gi|123172304|sp|Q164S6|QUEA_ROSDO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|109456312|gb|ABG32517.1| S-adenosylmethionine [Roseobacter denitrificans OCh 114]
Length = 351
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 170/362 (46%), Positives = 225/362 (62%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V ISD +VSDLP +L+ D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPAVPRTSARLLVAKGRQ-----ISDSIVSDLPNWLSPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + + I TL + +WS +P K +K + + F
Sbjct: 56 LNDTRVIPARLTGARHRDTAQGPMQARIEVTLLEPDAQGNWSALIKPLKKVKIAEEIIF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL AT + G+ +L F++ G + + ++ G +PLPPYIA +RP D RD
Sbjct: 115 ----SDRLRAT-LRAVKDGQGVLQFNLEGDDFDAALNAAGAMPLPPYIATRRPADERDKS 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LLS L + G+ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQNSGAVAAPTASLHFDKALLSELAARGVLFSYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K G R++ VGTT+LRL+ETA E G I W G T+IFI
Sbjct: 230 KMHAEWGQVSAAAAAEINATKQAGKRVIPVGTTALRLIETAGRE-GQIKAWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RF D LM+NFHLPKSTL+MLVSA G +E + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFRFNVADALMTNFHLPKSTLMMLVSALMGYDEVRAIYDHAVAEKYRFFSYGDASLLIP 348
Query: 359 KR 360
+R
Sbjct: 349 QR 350
>gi|294677090|ref|YP_003577705.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
capsulatus SB 1003]
gi|294475910|gb|ADE85298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
capsulatus SB 1003]
Length = 350
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 163/359 (45%), Positives = 226/359 (62%), Gaps = 13/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP RIA+RP PR +A+L+V P+ I D V+DLP L D +V
Sbjct: 1 MNLSDFDFELPEGRIAIRPARPRTAAKLLVATPD-----AIRDLTVADLPDLLGPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N TKVI A+L+G R + E + TL W A+P + +K+G+ + F
Sbjct: 56 LNTTKVIPARLSGRRTRQSAQGEVVARVEVTLLEPAPGGDWMALAKPLRKLKEGEEI-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S +R+ A G++ + F+++G + + ++ G +PLPPYIA R D +D
Sbjct: 115 SDALSARIAAIA-----EGQMRIRFNLTGPDFDAALAEAGAMPLPPYIAALRAPDEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHFT +LL +L G++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQKPGAVAAPTASLHFTPDLLEKLRDKGVQFTEVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A +N+ K+ GGR++ VGTT+LRL+E+A T G+I P++ T+IFI
Sbjct: 230 RMHAEWGEVTPQAAAEINATKAAGGRVIPVGTTALRLIESAATGPGVIAPFAATTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRFR D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 290 PGYRFRIADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALTKNYRFFSYGDASLLL 348
>gi|254466678|ref|ZP_05080089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium Y4I]
gi|206687586|gb|EDZ48068.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium Y4I]
Length = 354
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 168/367 (45%), Positives = 232/367 (63%), Gaps = 24/367 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V + + D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPDTLIATRPANPRSSARLLV-----AAGGSLHDGRVTDLVDWLQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK-------EISCTLHMRVSPNSWSVYARPSKVIKKGD 113
N+TKVI A+L+G+R RR+ +I TL + SW+ +P K I++G+
Sbjct: 56 LNDTKVIPARLSGLR-----RRDSAQGPVAAKIEATLLEPRADGSWAALLKPLKKIREGE 110
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ FS D + LEA G+ L F++SG + + ++ G +PLPPYIA KR D
Sbjct: 111 EI-VFSDDLSAALEAI-----EDGQGHLRFNLSGTDFDAALAEAGAMPLPPYIAAKRAAD 164
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+D DYQT +A+ G+VAAPTA LHF + LL L + G+++ +VTLHVGAGTF+PVKVE
Sbjct: 165 EQDKTDYQTVWARNSGAVAAPTASLHFDAPLLEALKARGVEISYVTLHVGAGTFLPVKVE 224
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H MH+E G + A + + K+ GGR++ VGTT+LRL+E+A DG I+ W G T
Sbjct: 225 DVTTHRMHAEWGKVSEEAASEIAATKAAGGRVIPVGTTALRLIESA-ARDGQIHAWEGDT 283
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG++F+ D LM+NFHLPKSTLLMLVSA G EE +++Y HA+ YRF+SYGD
Sbjct: 284 DIFIYPGFKFQVADALMTNFHLPKSTLLMLVSALMGQEEIRRIYDHAVRSGYRFFSYGDA 343
Query: 354 SLLFQKR 360
SLL +
Sbjct: 344 SLLIPAK 350
>gi|297172494|gb|ADI23466.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured nuHF1 cluster bacterium
HF0770_35I22]
Length = 349
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 165/356 (46%), Positives = 226/356 (63%), Gaps = 13/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IA +P PR+SA+L+ V + + D + DLPA L + D +V
Sbjct: 1 MKTSNFDFSLPPELIAQKPARPRESAKLLQVFSDGN----FRDVYIKDLPALLKAGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI AQL+G F EK++ LH + S W +A+P+K + D + FFS
Sbjct: 57 VNNTRVIPAQLSGKIFS----TEKKVRVNLHKQKSNGVWLAFAKPAKKLLLNDKI-FFS- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
S A + DK G+I L F++ G + + G++PLPPYI R + D DY
Sbjct: 111 ---STFFALITDKQPFGQITLKFNLVGATFLKALKKFGSMPLPPYIKRSGKVHPSDKTDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTT+A G+VA+PTAGLHF+ NL++ L GI+V +TLHVGAGTF+P+K + + H M
Sbjct: 168 QTTFASRDGAVASPTAGLHFSMNLINDLKRCGIRVAPITLHVGAGTFLPIKTDTINHHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+A TA +N + GG+I++VGTT LR LETA +G I+P+ G T+IFI PG
Sbjct: 228 HSEWVEINARTANLINKTRKAGGKIIAVGTTVLRTLETAVDTEGNIHPFKGKTDIFIAPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F+ VD+L++NFHLPKSTL +LVSAFCG+ K Y++AI YRF+SYGD SLL
Sbjct: 288 HQFKTVDLLITNFHLPKSTLFVLVSAFCGLNRMKNAYKYAIKKKYRFFSYGDASLL 343
>gi|296283991|ref|ZP_06861989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Citromicrobium bathyomarinum JL354]
Length = 349
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/360 (50%), Positives = 233/360 (64%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD+A+++VV + + P +D V DLP L + D +V
Sbjct: 1 MKVDLFDFDLPPERIALRPVSPRDAAKMLVV--DGAAPF--ADRQVRDLPDLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R I TLH R+ W + R +K +++GD + F
Sbjct: 57 FNDTRVIPAQLEGERIRE-GASGAAIGATLHKRIDARRWQAFVRNAKRLREGDTIRF--P 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + T + G L F+ G +E ++ G +PLPPYIA++R D RD DY
Sbjct: 114 DG---ISVTAEARAEDGSWTLAFA-GGEPVEELLARAGAMPLPPYIAQRRAADERDAQDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT L+ RL + GI +TLHVGAGTF+PVK +DT H M
Sbjct: 170 QTLFADKAGAVAAPTAALHFTPALVERLDAAGIVRETLTLHVGAGTFLPVKADDTAQHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A A LN+ ++ G R+++VGTTSLRLLE+A ++ I P++G T+IFITPG
Sbjct: 230 HAEWGEITAEAAARLNAARAEGRRVIAVGTTSLRLLESAADQNHTIQPFAGDTDIFITPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y FRAVD LM+NFHLPKSTL+MLVSA G E + Y +AI+H YRFYSYGD+SLL R
Sbjct: 290 YEFRAVDGLMTNFHLPKSTLMMLVSALMGRERMMEAYAYAIAHEYRFYSYGDSSLLLPPR 349
>gi|114771126|ref|ZP_01448566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [alpha
proteobacterium HTCC2255]
gi|114548408|gb|EAU51294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [alpha
proteobacterium HTCC2255]
Length = 348
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/359 (47%), Positives = 233/359 (64%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IALRPV PR S++L+V + +I D + +L +L D +V
Sbjct: 1 MKLSDFDFELPNELIALRPVHPRSSSKLLVSKDDK----IIDDQFL-NLLKYLKKGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHIN--RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R H + R I L + W A+P+K + G+I++F
Sbjct: 56 LNDTKVIPAKLHGKRIRHSDNGRTTANIGINLLSTNNDGHWLALAKPAKRVNVGEIINF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A V+DK + G ++L F++S ++++ +GT+PLPPYIA +R D D
Sbjct: 115 ----DNELTAKVLDKSSNG-LVLQFNLSEEIFDQKLKEIGTMPLPPYIASQRLPDKFDDN 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ GSVAAPTA LHF LL +L GIK VTLHVGAGTF+PVKV++ DH
Sbjct: 170 DYQTVFAEKSGSVAAPTASLHFDDVLLKQLNDFGIKTSKVTLHVGAGTFLPVKVDNIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G ++ A + KS GGRI+ VGTT+LRL+ETA + G IN W+G T+IFIT
Sbjct: 230 KMHSEWGEVNNIAASEIAKTKSEGGRIIPVGTTALRLIETA-AKSGKINSWTGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F+ D L++NFHLPKSTLLMLVSA G E+ K +Y HAI++ YRF+SYGD SLL
Sbjct: 289 PGFKFKIADGLITNFHLPKSTLLMLVSALIGTEKLKNVYLHAINNRYRFFSYGDASLLL 347
>gi|209543312|ref|YP_002275541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
gi|209530989|gb|ACI50926.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 355
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 165/357 (46%), Positives = 218/357 (61%), Gaps = 14/357 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP+ IA P PRDSARL+ ++ D +V DLP+ L D +V
Sbjct: 4 LASDFDFDLPPALIAEHPARPRDSARLL----DIPAAGPFHDRIVRDLPSLLRPGDLLVA 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL+ R E I TL + +W AR ++ ++ GD+L F
Sbjct: 60 NDTAVIPAQLDA------RRGEARIGITLDRILPDGTWHALARNARRLRAGDVLTFPGTP 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
A VI + + G ++L F G + + G + LPPYIAR +D VDY
Sbjct: 114 NT----AAVISRDDEGGVVLRFDTEGAAFDAFLQAAGVLALPPYIARPFGPTEQDRVDYA 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T ++ +G+VAAPTAGLHFT +LL+ L + G+ +TLHVGAGTF+PV+ + H MH
Sbjct: 170 TIFSAHRGAVAAPTAGLHFTPDLLAALDAAGVGRCTLTLHVGAGTFLPVRGDSIAAHRMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A TA A+N+ + GGRIV+VGTTSLRLLE+A DG I P+ G T IFI PGY
Sbjct: 230 AERGVITAETADAINAARRAGGRIVAVGTTSLRLLESAADPDGTIRPFDGDTAIFIRPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RFRAVD+LM+NFHLP+STL MLV AF G + + Y HA++ YRFYSYGD LL +
Sbjct: 290 RFRAVDVLMTNFHLPRSTLFMLVCAFAGYDRMRDAYAHAVADGYRFYSYGDACLLHR 346
>gi|163746642|ref|ZP_02153999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanibulbus indolifex HEL-45]
gi|161379756|gb|EDQ04168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanibulbus indolifex HEL-45]
Length = 348
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/359 (45%), Positives = 226/359 (62%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEELIATRPANPRSSARLLVAEGA-----QLHDRRVTDLTDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R + +I TL +WS +P + +K G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRASAQGAVQAKIEVTLLEPRGDGTWSALIKPLRKLKIGEEV-IF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D ++ LEA G+ L F+ +G + + ++ G +PLPPYIA KR DA+D
Sbjct: 115 SDDLRATLEAV-----EDGQGHLRFNCAGDDFDAALNAAGAMPLPPYIAAKRAADAQDMT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+ VTLHVGAGTF+PVKV+D +H
Sbjct: 170 DYQTVFARHAGAVAAPTASLHFDETLLAALAAKGVTFSHVTLHVGAGTFLPVKVDDISEH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A+ + + ++ GGR++ VGTT+LRL+ETA DG I W G T+IFIT
Sbjct: 230 KMHAEWGRVSAEAAEEITATRAAGGRVIPVGTTALRLIETA-ARDGQITAWEGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ F D LM+NFHLPKSTL+MLVSA G+++ K +Y HAI+ YRF+SYGD+SLL
Sbjct: 289 PGFTFNVTDGLMTNFHLPKSTLMMLVSALMGVQQVKDIYAHAIAEKYRFFSYGDSSLLL 347
>gi|162146698|ref|YP_001601157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
gi|189038525|sp|A9HBI8|QUEA_GLUDA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161785273|emb|CAP54819.1| putative s-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 355
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/357 (46%), Positives = 218/357 (61%), Gaps = 14/357 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP+ IA P PRDSARL+ ++ D +V DLP+ L D +V
Sbjct: 4 LASDFDFDLPPALIAEHPARPRDSARLL----DIPAAGPFHDRIVRDLPSLLRPGDLLVA 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL+ R E I TL + +W AR ++ ++ GD+L F
Sbjct: 60 NDTAVIPAQLDA------RRGEARIGITLDRILPDGTWHALARNARRLRAGDVLTFPGTP 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
A VI + + G ++L F G + + G + LPPYIAR +D VDY
Sbjct: 114 NT----AAVISRDDEGGVVLRFDTEGAAFDAFLQAAGVLALPPYIARPFGPTEQDRVDYA 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T ++ +G+VAAPTAGLHFT +LL+ L + G+ +TLHVGAGTF+PV+ + H MH
Sbjct: 170 TIFSAHRGAVAAPTAGLHFTPDLLAALDAAGVGRCTLTLHVGAGTFLPVRGDSIAAHRMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A TA A+N+ + GGRIV+VGTTSLRLLE+A DG I P+ G T IFI PGY
Sbjct: 230 AERGVITAETADAINAARRAGGRIVAVGTTSLRLLESAADPDGTIRPFDGDTAIFIRPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RFRAVD+LM+NFHLP+STL MLV AF G + + Y HA++ YRFYSYGD LL +
Sbjct: 290 RFRAVDVLMTNFHLPRSTLFMLVCAFAGYDRMRDAYAHAVADGYRFYSYGDACLLHR 346
>gi|114570417|ref|YP_757097.1| queuosine biosynthesis protein [Maricaulis maris MCS10]
gi|122315730|sp|Q0ANH8|QUEA_MARMM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114340879|gb|ABI66159.1| Queuosine biosynthesis protein [Maricaulis maris MCS10]
Length = 353
Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/361 (47%), Positives = 236/361 (65%), Gaps = 11/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP +RIALRP PRD+AR++ V N V +D V DLP L D +V
Sbjct: 1 MRVSDFDFHLPEARIALRPARPRDAARMLHVASNG----VFADRGVRDLPDLLQPGDLMV 56
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI A L G+R E+ LH R+ ++W + RP+K ++ GD + F
Sbjct: 57 FNDTRVIPAALKGIRPARAVGGGGPVEVEVNLHKRIDASAWRAFVRPAKRLRMGDEIAF- 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G++ L+A V K G++ LVF+ +G L+ I++ G +PLPPYIARKR +D +D
Sbjct: 116 ---GET-LKAEVTGKSEGGDVRLVFNAAGAALDAAIAVAGEMPLPPYIARKRGVDEKDEA 171
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A +GSVAAPTAGLHFT L++ L + G++ VTLHVGAGTF+PVK +DTDDH
Sbjct: 172 DYQTLFATHEGSVAAPTAGLHFTPELMAALEARGVEQTRVTLHVGAGTFLPVKSDDTDDH 231
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + A A A+N+ K+ G R++ VGTT+LR +E+ + GI+ S T+IF+T
Sbjct: 232 QMHSEWCTVSAEAADAINAAKAEGRRVIPVGTTALRTIESLASGPGIVRAGSRDTDIFLT 291
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG F D+LM+NFHLPKSTL MLVSA G++ ++ Y HAI+ YRFYSYGD LL +
Sbjct: 292 PGSDFAITDMLMTNFHLPKSTLFMLVSALSGLDVMQRAYAHAIAAEYRFYSYGDACLLER 351
Query: 359 K 359
+
Sbjct: 352 R 352
>gi|254460455|ref|ZP_05073871.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2083]
gi|206677044|gb|EDZ41531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium HTCC2083]
Length = 352
Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/363 (45%), Positives = 224/363 (61%), Gaps = 14/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA RP PR SARL++ I D VSDL D +V
Sbjct: 1 MKLSDFDFYLPEDLIATRPAKPRSSARLLLAKDG-----AIKDAYVSDLVKIFQPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVS-PNSWSVYARPSKVIKKGDILHF 117
NNTKVI A+L GVR E +I TL ++ P +W +P + +K+G+++ F
Sbjct: 56 LNNTKVIPARLFGVRKRESVHGSGEAKIEVTLLEPIATPGTWQALIKPLRKVKEGEVMVF 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L AT+ DK + G+ L F++ G + + ++ G +PLPPYIA +RP DA+D
Sbjct: 116 -----SETLSATLTDK-DDGQGTLQFNLLGDDFDTALAEAGAMPLPPYIAARRPADAQDK 169
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A+ G+VAAPTA LHF + LL L ++ VTLHVGAGTF+PVKVED
Sbjct: 170 DDYQTVFAQHSGAVAAPTASLHFDAALLGELKERCVEFAEVTLHVGAGTFLPVKVEDVTT 229
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G +D A + + K G R++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 HKMHAEWGQVDETAADQITAAKREGRRVIPVGTTALRLIESAAAQTGEIAPWEGETDIFI 289
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F D LM+NFHLPKSTL+MLVSA G E ++Y HAI++ YRF+SYGD+SLL
Sbjct: 290 YPGFKFNVADALMTNFHLPKSTLMMLVSALMGKERVDQIYTHAIANEYRFFSYGDSSLLV 349
Query: 358 QKR 360
++
Sbjct: 350 PEK 352
>gi|258541319|ref|YP_003186752.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pasteurianus IFO 3283-01]
gi|256632397|dbj|BAH98372.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-01]
gi|256635454|dbj|BAI01423.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-03]
gi|256638509|dbj|BAI04471.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-07]
gi|256641563|dbj|BAI07518.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-22]
gi|256644618|dbj|BAI10566.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-26]
gi|256647673|dbj|BAI13614.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-32]
gi|256650726|dbj|BAI16660.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653717|dbj|BAI19644.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-12]
Length = 360
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 224/354 (63%), Gaps = 14/354 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDF LP S IA P PR++ARL+ + + P + +D + DLP+ L D +V N
Sbjct: 6 TEDFDFHLPESLIAQEPARPREAARLL----DATQPDMFADRHIRDLPSLLKRGDLLVAN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT VI AQL+G+R E +I TL SW V R ++ +K GD + F
Sbjct: 62 NTAVIRAQLHGLR------GEAKIGITLDQIQPDGSWHVLVRNARRLKVGDTIAFPGVQD 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+R++A G +L FS G + + G + LPPYI R A+D DY T
Sbjct: 116 TARVQAL----EPGGGAVLQFSAEGDAFDAFLQKAGALALPPYIHRPEGPTAQDTSDYAT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+ + +G+VAAPTAGLHFT LL + + G + +TLHVGAGTF+PV+ + +H MHS
Sbjct: 172 IFERNKGAVAAPTAGLHFTPALLKAIDATGAQRCTLTLHVGAGTFLPVREAEISEHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E G I TA+ +N+ + GGRI+++GTTSLRLLETAT E+GI++P+ G T+IFI PGY+
Sbjct: 232 ERGIITPETAERINATRKAGGRIIAIGTTSLRLLETATDENGIVHPFDGTTSIFIRPGYQ 291
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
FRAVD+L++NFHLP+STL MLVSAF G+E +++Y HA++ YRFYSYGD LL
Sbjct: 292 FRAVDMLLTNFHLPRSTLFMLVSAFAGVERARQIYAHAVASGYRFYSYGDACLL 345
>gi|163742741|ref|ZP_02150126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Phaeobacter
gallaeciensis 2.10]
gi|161383996|gb|EDQ08380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Phaeobacter
gallaeciensis 2.10]
Length = 356
Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 228/358 (63%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA RP PR SARL+V + I D V++L +L S D +V
Sbjct: 1 MKLSDFDFDLPDDRIATRPAVPRSSARLLVAEGDR-----IRDARVANLGQWLRSGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G+R + ++ TL + SW+ +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGPMAAKVEVTLLDPGADGSWAALLKPLKKVKPGEEIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT +++ G+ L F++SG + + ++ G +PLPPYIA KRP D +D
Sbjct: 115 ----SDALSAT-LERVEDGQGHLKFNLSGTDFDAALAEAGAMPLPPYIAAKRPADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDDALLAELQAKGVEISYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 RMHAEWGRVSAEAATEIAATKAAGGRVIPVGTTALRLIESA-GQSGAIQPWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ F D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFTFHVADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALAEEYRFFSYGDASLL 346
>gi|296114522|ref|ZP_06833175.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter hansenii ATCC 23769]
gi|295978878|gb|EFG85603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter hansenii ATCC 23769]
Length = 352
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 223/358 (62%), Gaps = 14/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +FDFDLP + IA P PRDSAR++ V P + D V DLP L + D +V
Sbjct: 4 LVSDFDFDLPVALIADHPARPRDSARMLEVPPQGA----FCDRHVRDLPGCLRAGDILVA 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL +R I TL + +W AR S+ +K GDIL F
Sbjct: 60 NDTAVIPAQLAAMRGA------ARIGITLDRILPDGTWHALARNSRRLKPGDILTF---- 109
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
S + A V+ + G +++ F + G ++ + G + LPPYIAR D DY
Sbjct: 110 APSAVTAEVVVCEDAGGVVMRFDVEGEAFDQFLHDTGHLALPPYIARPDGPTEEDRKDYS 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ +G+VAAPTAGLHFT LLS L + G+ +TLHVGAGTF+P++ E +H MH
Sbjct: 170 TIFAQHRGAVAAPTAGLHFTPALLSGLEAAGVLRQTLTLHVGAGTFLPMRSEQISEHRMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A A +N+ ++ GGR+++VGTTSLRLLE+AT EDG+++P+ G T IFI PGY
Sbjct: 230 AERGTITAHAAHRINAARAAGGRVIAVGTTSLRLLESATDEDGVVHPFHGETAIFIRPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
RFRAVD+L++NFHLP+STL MLVSAF G + Y+HA++ YRFYSYGD LL +
Sbjct: 290 RFRAVDMLLTNFHLPRSTLFMLVSAFAGQARMRAAYEHAMAAGYRFYSYGDACLLHRN 347
>gi|329114921|ref|ZP_08243677.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pomorum DM001]
gi|326695818|gb|EGE47503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pomorum DM001]
Length = 358
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 224/354 (63%), Gaps = 14/354 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDF LP S IA P PR++ARL+ + + P + +D + DLP+ L D +V N
Sbjct: 6 TEDFDFHLPESLIAQEPARPREAARLL----DATQPGIFADRHIRDLPSLLKRGDLLVAN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT VI AQL+G+R E +I TL SW V R ++ +K GDI+ F
Sbjct: 62 NTAVIRAQLHGLR------GEAKIGITLDQIQPDGSWHVLVRNARRLKVGDIIAFPGVQD 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+R V+ G +L FS G + + G + LPPYI R A+D DY T
Sbjct: 116 IAR----VLALEPGGGAVLRFSAEGDAFDVFLQKAGALALPPYIHRPEGPTAQDTSDYAT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+ + +G+VAAPTAGLHFT LL + + G + +TLHVGAGTF+PV+ + +H MHS
Sbjct: 172 IFERNKGAVAAPTAGLHFTPALLKAVDATGAQRCTLTLHVGAGTFLPVREAEISEHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E G I TA+ +N+ + GGRI+++GTTSLRLLETAT E+GI++P+ G T+IFI PGY+
Sbjct: 232 ERGIITPETAERINTTRKAGGRIIAIGTTSLRLLETATDENGIVHPFDGTTSIFIRPGYQ 291
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
FRAVD+L++NFHLP+STL MLVSAF G+E +++Y HA++ YRFYSYGD LL
Sbjct: 292 FRAVDMLLTNFHLPRSTLFMLVSAFAGVERARQIYAHAVASGYRFYSYGDACLL 345
>gi|83954337|ref|ZP_00963057.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. NAS-14.1]
gi|83841374|gb|EAP80544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. NAS-14.1]
Length = 354
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/363 (46%), Positives = 226/363 (62%), Gaps = 18/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR SA+++V + ++D V+++ +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPAVPRTSAKMLVAQGDH-----MTDTTVANMSDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L+G+R H N + I TL W+ +P K +K + +
Sbjct: 56 LNDTRVIPARLSGLR--HRNSVQGPVQARIEVTLLEPRGDADWTALIKPLKKLKIDETV- 112
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
FS D +RL G+ L F+ SG + + ++ G +PLPPYIA KRP DA+D
Sbjct: 113 VFSADLSARLVGV-----EDGQGRLRFNCSGDDFDAALNDAGAMPLPPYIAGKRPADAQD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +AK G+VAAPTA LHF LL +L +G++ VTLHVGAGTF+PVKV+D
Sbjct: 168 MTDYQTVFAKNAGAVAAPTASLHFDQLLLDQLAEMGVRFSHVTLHVGAGTFLPVKVDDIA 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSE G + A A +++ K+ GGR++ VGTT+LRL+ETA G I PW G T+IF
Sbjct: 228 DHKMHSEWGQVSAQAAAEISATKAAGGRVIPVGTTALRLVETA-ARSGNIQPWEGDTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG+ F D LM+NFHLPKSTL+MLVSA G + +K+Y HAI YRF+SYGD SLL
Sbjct: 287 ITPGFEFNVADALMTNFHLPKSTLMMLVSALMGQKTIQKIYNHAIESNYRFFSYGDASLL 346
Query: 357 FQK 359
F K
Sbjct: 347 FPK 349
>gi|83943202|ref|ZP_00955662.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. EE-36]
gi|83846210|gb|EAP84087.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. EE-36]
Length = 354
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/361 (45%), Positives = 225/361 (62%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR SA+++V + ++D V+++ +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPAVPRTSAKMLVAQGDH-----MTDTTVANMSDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRR--EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R + + I TL W+ +P K +K + + F
Sbjct: 56 LNDTRVIPARLSGLRHRESAQGPVQARIEVTLLEPRGDADWTALIKPLKKLKIDETV-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D +RL G+ L F+ SG + + ++ G +PLPPYIA KRP DA+D
Sbjct: 115 SADLSARLVGV-----EDGQGRLRFNCSGDDFDAALNDAGAMPLPPYIAGKRPADAQDMT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF LL +L +IG+ VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVFAKNAGAVAAPTASLHFDQPLLDQLAAIGVCFSHVTLHVGAGTFLPVKVDDIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A A +++ K+ GGR++ VGTT+LRL+ETA G I PW G T+IFIT
Sbjct: 230 KMHSEWGQVSAQAAAEISATKAAGGRVIPVGTTALRLVETA-ARSGNIQPWEGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTL+MLVSA G + +K+Y HAI YRF+SYGD SLLF
Sbjct: 289 PGFEFNVADALMTNFHLPKSTLMMLVSALMGQKTIQKIYNHAIESNYRFFSYGDASLLFP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|259418623|ref|ZP_05742540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter sp. TrichCH4B]
gi|259344845|gb|EEW56699.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter sp. TrichCH4B]
Length = 369
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 165/360 (45%), Positives = 228/360 (63%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D V+DL +LN+ D +V
Sbjct: 21 MKLSDFDFDLPEDLIATRPAVPRSSARLLVAEQDR-----ITDARVTDLLQWLNAGDRLV 75
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L+G R H + +S + + + + WS +P K IK G+ +
Sbjct: 76 LNDTRVIPARLSGQR--HRTSAQGPVSARIEVTLLEPQADGCWSGLLKPLKKIKIGETVR 133
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F DG S V++ G+ L F+++G + + ++ G +PLPPYIA KRP D +D
Sbjct: 134 F--SDGLSAELVDVVE----GQGRLRFNLAGDDFDAALAEAGAMPLPPYIAAKRPADEQD 187
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTA LHF LL+ L + G++ +VTLHVGAGTF+PVKVED
Sbjct: 188 KTDYQTVWARSSGAVAAPTASLHFDEPLLAALAAKGVEFTYVTLHVGAGTFLPVKVEDVT 247
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A A + + K+ G R++ VGTT+LRL+E+A + G I PW G T+IF
Sbjct: 248 SHKMHAEWGQVTAKAAAEIAATKAAGKRVIPVGTTALRLIESAARDSGAIAPWEGETDIF 307
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+ FR D LM+NFHLPKSTL+MLVSA G E + +Y HA++ YRF+SYGD SLL
Sbjct: 308 IYPGFTFRVADALMTNFHLPKSTLMMLVSALMGQERMRSVYAHAVTERYRFFSYGDASLL 367
>gi|159043729|ref|YP_001532523.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dinoroseobacter shibae DFL 12]
gi|189038520|sp|A8LI68|QUEA_DINSH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157911489|gb|ABV92922.1| queuosine biosynthesis protein [Dinoroseobacter shibae DFL 12]
Length = 353
Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 165/363 (45%), Positives = 225/363 (61%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V P D V+DL L D +V
Sbjct: 1 MHLSDFDFDLPETLIATRPARPRSSARLLVAEAR--GPF--RDRRVTDLVDELQPGDRLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV---SPNSWSVYARPSKVIKKGDILHF 117
NNTKVI A+L G R H + + +S + + + + W+ A+P + + +G+ + F
Sbjct: 57 LNNTKVIPARLFGTR--HRDSAQGPVSAKVEITLLEPASEGWTALAKPLRKLAEGEEIVF 114
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L ATV ++ + LVF+ +G + + ++ G +PLPPYIA KR DA+D
Sbjct: 115 -----SDALRATVAER-GADRVRLVFNCTGDDFDAALAQAGAMPLPPYIAAKRAADAQDR 168
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTA LHF LL+ L + G++ FVTLHVGAGTF+PVKV+D
Sbjct: 169 DDYQTVFAARKGAVAAPTASLHFDEALLAALRARGVEFSFVTLHVGAGTFLPVKVDDVTT 228
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE G I A + + ++ G R++ VGTT+LRL+ETA + G PW G T+IFI
Sbjct: 229 HKMHSEWGEISDQAAAEILATRADGRRVIPVGTTALRLIETAAAQPGGFGPWEGDTDIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ FR D LM+NFHLPKSTL+MLVSA G E +++Y HAI+ YRF+SYGD+SLL
Sbjct: 289 YPGFEFRITDGLMTNFHLPKSTLMMLVSALMGAERIREIYAHAIAQEYRFFSYGDSSLLL 348
Query: 358 QKR 360
R
Sbjct: 349 PDR 351
>gi|254450756|ref|ZP_05064193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 238]
gi|198265162|gb|EDY89432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 238]
Length = 350
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/361 (45%), Positives = 232/361 (64%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA+RPV PR SA+L+V + D V+DL + L + D +V
Sbjct: 1 MKLSDFDFDLPDTLIAVRPVRPRSSAKLLVADGPET-----HDLQVTDLRSVLQAGDHLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G +R +I TL + +W+ +P + ++ G+ + F
Sbjct: 56 LNDTKVIPARLFGERIRKSPDGAGLAKIEVTLLEPQADGTWAALIKPLRKVRDGERI-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
SQD L A ++ +++ G L F++ + + ++ VG +PLPPYIA KRP D D
Sbjct: 115 SQD----LSAMLVHRYD-GMGYLEFNVKDDDFDTALNAVGAMPLPPYIAAKRPADDLDKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL LI++G+K+ +VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVWARASGAVAAPTASLHFEQWLLDDLIAMGVKISYVTLHVGAGTFVPVKVDDVADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+MHSE G + A A + + K+ GGR++ VGTT+ RL+ETA G + W G T+IFIT
Sbjct: 230 VMHSEWGQVSALAASDIMATKAAGGRVIPVGTTACRLIETAGAS-GTLVEWEGETDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G + K +Y HAI++ YRF+SYGD S+L
Sbjct: 289 PGFEFQITDGLMTNFHLPKSTLMMLVSALMGTQRIKDIYAHAIANEYRFFSYGDASILLP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|84684975|ref|ZP_01012875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Maritimibacter alkaliphilus HTCC2654]
gi|84667310|gb|EAQ13780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2654]
Length = 355
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 225/355 (63%), Gaps = 12/355 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++DFDLP IA RP PR SARL+V I+D +V+DL +L D +V N
Sbjct: 10 LSDYDFDLPEDLIATRPARPRSSARLLVAERAR-----ITDGVVTDLVDWLRPGDRLVLN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G R + E++ L P +WS +P + +K G+ + F +
Sbjct: 65 DTRVIPARLEGTRTRGEAQARIEVTL-LAPDAQPGAWSALVKPLRKVKDGETIDFAAG-- 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L ATV+ + + G+ +L F+++G + ++ G +PLPPYI KR DA+D DYQT
Sbjct: 122 ---LSATVLSR-SEGQAVLTFNLTGAAFDAALAEAGRMPLPPYIEAKRRADAQDREDYQT 177
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ G+VAAPTA LHF LL+ L + G+ VTLHVGAGTF+PVKV+D DH MH+
Sbjct: 178 VWARQTGAVAAPTASLHFDDALLAALDARGVARTHVTLHVGAGTFLPVKVDDVSDHKMHA 237
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E G + A +N+ ++ GGRI+ VGTT+LRL+E+A G I PW G T+IFI PGY
Sbjct: 238 EWGEVTEAAAAEINATRAAGGRIIPVGTTALRLIESAAAAPGRIEPWRGPTDIFIRPGYA 297
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ D LM+NFHLPKSTL+MLVSA G+E +++Y HAI + YRF+SYGD SLL
Sbjct: 298 FKITDGLMTNFHLPKSTLMMLVSALMGMERMREVYAHAIENRYRFFSYGDASLLL 352
>gi|126739327|ref|ZP_01755020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. SK209-2-6]
gi|126719427|gb|EBA16136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. SK209-2-6]
Length = 356
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/359 (47%), Positives = 222/359 (61%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SAR++V + P I D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPETLIATRPASPRSSARMLV-----ATPQEIHDQTVTDLIDWLKPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G+R + I TL S SW+ +P K IK G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRESAQGKTAARIEVTLLEPRSDGSWAGLLKPLKKIKLGERIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D S V D G+ LL F++ G + + ++ G +PLPPYIA KR DA+D
Sbjct: 115 -SDALSAELVGVED----GQGLLSFNLQGEDFDAALAQAGAMPLPPYIAAKRAADAQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF + LL L G+K VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVWAKNSGAVAAPTASLHFDTALLEALQEKGVKFTHVTLHVGAGTFLPVKVDDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + K+ GGR++ VGTT+LRL+E+A DG + PW G T+IFI
Sbjct: 230 KMHAEWGKVSEQAASEIAETKAAGGRVIPVGTTALRLIESA-ARDGRVEPWEGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ F+A D LM+NFHLPKSTLLML+SA G E +++Y HA+ YRF+SYGD SLL
Sbjct: 289 PGFSFQATDALMTNFHLPKSTLLMLISALMGQERVREIYAHAVEGEYRFFSYGDASLLL 347
>gi|99080934|ref|YP_613088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. TM1040]
gi|122398114|sp|Q1GHP0|QUEA_SILST RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|99037214|gb|ABF63826.1| Queuosine biosynthesis protein [Ruegeria sp. TM1040]
Length = 349
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/360 (46%), Positives = 222/360 (61%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + ISD V+DL +L D +V
Sbjct: 1 MKLGDFDFDLPEELIATRPAVPRSSARLLVAEQDR-----ISDGRVTDLLDWLAPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L+G R H N + +S + + + + SW+ +P K IK G+ L
Sbjct: 56 LNDTRVIPARLSGQR--HRNSAQGPVSARIEVTLLEPQADGSWAGLLKPLKKIKIGETLR 113
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F D S V+D G+ L F+++G + + ++ G +PLPPYIA KRP D +D
Sbjct: 114 F--SDALSAELVDVVD----GQGRLRFNLAGDDFDAALAEAGAMPLPPYIAAKRPADEQD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTA LHF LL L G+ +VTLHVGAGTF+PVKVED
Sbjct: 168 KTDYQTVWARNSGAVAAPTASLHFDEPLLKALSEKGVTFTYVTLHVGAGTFLPVKVEDVT 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A + + K+ G R++ VGTT+LRL+E+A E G I PW G T+IF
Sbjct: 228 THKMHAEWGQVTPEAAAEIAATKAAGNRVIPVGTTALRLIESAARESGAITPWEGETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+ FR D LM+NFHLPKSTL+MLVSA G + + +Y HA+ YRF+SYGD SLL
Sbjct: 288 IYPGFEFRVADALMTNFHLPKSTLMMLVSALMGQDRIRAIYAHAVKERYRFFSYGDASLL 347
>gi|255261251|ref|ZP_05340593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thalassiobium sp. R2A62]
gi|255103586|gb|EET46260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thalassiobium sp. R2A62]
Length = 348
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/361 (46%), Positives = 236/361 (65%), Gaps = 21/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA+RP PR SARL++ + I D +V+DL L D +V
Sbjct: 1 MKLSDFDFDLPDDRIAVRPTQPRSSARLLLARGD-----DILDRVVTDLIDILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L+G R H N + +S + + + + +W+ +P K + +G+ +
Sbjct: 56 LNDTRVIPARLSGQR--HRNSAQGPVSAAIDVTLLTPQADGAWTALIKPLKKVTEGEDI- 112
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
FS D L AT+I K + G+ L F+++G + + ++ G +PLPPYIA KR DA+D
Sbjct: 113 VFSDD----LSATLIGKED-GQGRLKFNLTGDDFDAALAAAGAMPLPPYIAAKRAADAQD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+ DYQT +A+ QG+VAAPTA LHF LL L + GI+ +VTLHVGAGTF+PVKV++
Sbjct: 168 HTDYQTVWARHQGAVAAPTASLHFDQPLLEALNAKGIQFTYVTLHVGAGTFLPVKVDNIA 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSE G I A A+NS GR++ VGTT+LRL+E+A ++G + W G T+IF
Sbjct: 228 DHKMHSEWGQITHAAADAINSTT---GRVIPVGTTALRLIESA-AQNGRLAAWEGPTDIF 283
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG++F+ D LM+NFHLPKSTL+MLVSA G + K +Y HA+ H YRF+SYGD+SLL
Sbjct: 284 ITPGFKFQIADGLMTNFHLPKSTLMMLVSALMGTQNIKDIYAHALRHEYRFFSYGDSSLL 343
Query: 357 F 357
Sbjct: 344 L 344
>gi|119383366|ref|YP_914422.1| queuosine biosynthesis protein [Paracoccus denitrificans PD1222]
gi|119373133|gb|ABL68726.1| Queuosine biosynthesis protein [Paracoccus denitrificans PD1222]
Length = 359
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/361 (46%), Positives = 223/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP + IA RP PR SARL++ + I D V DL L S D +V
Sbjct: 9 MKLDDFDFHLPETLIATRPARPRSSARLLLAQGD-----SIRDLHVRDLADLLGSGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+LNG R + E ++ TL V+ + W A+P + +K G+++ F
Sbjct: 64 LNDTKVIPARLNGTRARQTPQGEAVAKVEVTLLEPVA-HGWKALAKPLRKLKPGEVIRFG 122
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S L A V + GE+ L F +G + ++ VG +PLPPYIA R D D
Sbjct: 123 SA-----LSAEVAEIAG-GELTLRFDATGEAFDAALAQVGAMPLPPYIAALRAPDEADRQ 176
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L + G++ VTLHVGAGTF+PVKVED H
Sbjct: 177 DYQTVWARNSGAVAAPTASLHFDGELLDGLAARGVRFTHVTLHVGAGTFLPVKVEDVTTH 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A A+N+ ++ GGR++ VGTT+LRL+E+A EDG ++P+ G T IFI
Sbjct: 237 KMHGEWGEVTPEAAAAINATRAAGGRVIPVGTTALRLIESAAAEDGTVHPFQGVTEIFIY 296
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR D LM+NFHLPKSTLLMLVSA G + + +Y+HA+ YRF+SYGD SLL
Sbjct: 297 PGYRFRVTDALMTNFHLPKSTLLMLVSALMGQDRIRGIYRHAVESGYRFFSYGDASLLIP 356
Query: 359 K 359
K
Sbjct: 357 K 357
>gi|260575224|ref|ZP_05843224.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhodobacter
sp. SW2]
gi|259022484|gb|EEW25780.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhodobacter
sp. SW2]
Length = 345
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/356 (46%), Positives = 218/356 (61%), Gaps = 13/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL++ + ISD VSDL D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRTAARLLLAEGD-----AISDRQVSDLVDIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R + TL + W A+P + + G+++ F
Sbjct: 56 LNNTRVIPARLTGTRAR--GNAVARVEVTLLEPAADGGWRALAKPLRKLALGEVVRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV K T ++ LVF + G + ++ G +PLPPYIA KR DA+D VDY
Sbjct: 111 --SDHFSATVAGKSET-DLRLVFDLEGAAFDAALAEAGAMPLPPYIAAKRAPDAQDRVDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF + LL+ L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHSGAVAAPTASLHFDAALLAALAAKGVDFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A +N+ + GGR++ VGTT+LRL+E+A DG++ W+G T+IFI PG
Sbjct: 228 HAEWGEVTTVAAAQINATHAAGGRVIPVGTTALRLIESAAAADGLVRAWAGTTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR D LM+NFHLPKSTLLMLVSA G ++YQHA+ YRF+SYGD SLL
Sbjct: 288 YRFRVADALMTNFHLPKSTLLMLVSALMGQGRITRIYQHAVVQRYRFFSYGDASLL 343
>gi|114764580|ref|ZP_01443784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pelagibaca
bermudensis HTCC2601]
gi|114542956|gb|EAU45976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. HTCC2601]
Length = 349
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 166/358 (46%), Positives = 223/358 (62%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D +V DL +L D +V
Sbjct: 1 MHLSDFDFDLPDELIATRPANPRSSARLLVAEGD-----TITDAVVRDLTQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R + + +I TL W+ +P K +++G+ + F
Sbjct: 56 LNDTKVIPARLSGARTRESAQGVTQAQIEITLLEPRPGGLWAALVKPLKKLREGETV-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S+ + LEA G+ LL F++ G + + ++ G +PLPPYIA KR DA+D
Sbjct: 115 SEALSATLEAR-----EDGQGLLRFNLEGEDFDAALAEAGAMPLPPYIAAKRAADAQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL+ L + G+ VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVWAERTGAVAAPTASLHFDAGLLAALEAHGVAFTKVTLHVGAGTFLPVKVDDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + K+ GGR++ VGTT+LRLLETA + G I W G T+IFI
Sbjct: 230 KMHGEWGEVSESAAAEIAATKAAGGRVIPVGTTALRLLETAARDSGAIAAWQGVTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D LM+NFHLPKSTL+MLVSA G E +Y+HAIS YRF+SYGD+SLL
Sbjct: 290 PGFAFRVTDALMTNFHLPKSTLMMLVSALMGRERMMGIYEHAISERYRFFSYGDSSLL 347
>gi|329850831|ref|ZP_08265676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Asticcacaulis biprosthecum C19]
gi|328841146|gb|EGF90717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Asticcacaulis biprosthecum C19]
Length = 356
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 167/345 (48%), Positives = 219/345 (63%), Gaps = 15/345 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IALRP PR+SARL+ + ++D V D+ AFL S D +V N+TKV+ AQL+G+
Sbjct: 15 IALRPAEPRESARLLRIDAQGG----LTDARVGDIAAFLKSGDLLVVNDTKVLPAQLHGI 70
Query: 75 RFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVI 131
R RR+ I TL W + +P + ++ GD LHF S +L+ATV
Sbjct: 71 R-----RRDGADVAIEATLIKATGATQWQAFLKPGRKVRIGDDLHFGSD---IKLQATVA 122
Query: 132 DKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSV 191
K G L F + L ++ ++G +PLPPYI KR D +D DYQT +A +GSV
Sbjct: 123 AKAEDGRYTLDFHHTPEVLVERLHVIGAMPLPPYIRSKRREDDQDKRDYQTVFANEEGSV 182
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPT 251
AAPTAGLHFTS LL L S G+ + +TLHVGAGTF+P+KVEDT DHIMH+E+G I A +
Sbjct: 183 AAPTAGLHFTSQLLEVLQSQGVGIERITLHVGAGTFLPMKVEDTRDHIMHAELGVISAES 242
Query: 252 AQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMS 311
A +N+ + GGRIV VGTTSLRLLE+A G I+ ++ T IFITPG R+ D++++
Sbjct: 243 AARINAARIAGGRIVCVGTTSLRLLESACDPQGTIHAFASETAIFITPGVVVRSCDLVLT 302
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
NFHLPKSTL MLVSA G + K Y+HAI YRF+SYGD L+
Sbjct: 303 NFHLPKSTLFMLVSALAGTDTMKAAYRHAIETGYRFFSYGDACLI 347
>gi|254487456|ref|ZP_05100661.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. GAI101]
gi|214044325|gb|EEB84963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. GAI101]
Length = 358
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 172/358 (48%), Positives = 226/358 (63%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLP + IA RP PR SARL+V P V+ D +V+DLP +L + D +V
Sbjct: 5 LKLSDFDFDLPEALIATRPAVPRTSARLLVA----DGP-VLHDKVVTDLPDWLRAGDRLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRR--EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + + I TL S +W+ +P K +K G+ + F
Sbjct: 60 LNDTRVIPARLTGARHRDSAQGPVQARIEITLLEPRSDGTWAALIKPLKKLKVGEDV-VF 118
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D L AT+I + G+ L F+ +G + + ++ G +PLPPYIA KRP DA+D
Sbjct: 119 SPD----LRATLIGTAD-GQGHLQFNCAGDDFDAALNAAGAMPLPPYIAAKRPADAQDLT 173
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L G+ VTLHVGAGTF+PVKV+D DH
Sbjct: 174 DYQTVFARNLGAVAAPTASLHFDDALLQTLADKGVTFSHVTLHVGAGTFLPVKVDDIADH 233
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A A + + K+ GGR++ VGTT+LRL+ETA G I W G T+IFIT
Sbjct: 234 KMHSEWGKVSAQAAAEIAATKAAGGRVIPVGTTALRLVETA-ARGGTIKAWEGDTDIFIT 292
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ F D LM+NFHLPKSTL+MLV+A G E K +Y HAIS YRF+SYGD SLL
Sbjct: 293 PGFTFNVADALMTNFHLPKSTLMMLVAALMGQEAIKTLYAHAISSNYRFFSYGDASLL 350
>gi|254437697|ref|ZP_05051191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 307]
gi|198253143|gb|EDY77457.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 307]
Length = 350
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/361 (45%), Positives = 230/361 (63%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP S IA+RP PR SA+L+V + + D V+DL + L + D +V
Sbjct: 1 MKLSDFDFDLPDSLIAVRPARPRSSAKLLVAGGDGT-----RDLRVTDLVSVLRAGDHLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G R +I TL + +W+ +P + ++ G+ + F
Sbjct: 56 LNDTKVIPARLVGERMRKSTDGAGLAKIEVTLLEPQADGTWAALIKPLRKVRDGERV-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D L A ++ +++ G L F+++G + + ++ G +PLPPYIA KRP D D
Sbjct: 115 SDD----LSAVLVHRFD-GMGYLDFNVTGDDFDAALNAAGAMPLPPYIAAKRPADDLDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A G+VAAPTA LHF LL L ++G+K +VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVWAARSGAVAAPTASLHFEQWLLDDLAAMGVKFSYVTLHVGAGTFLPVKVDDVADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+MHSE G + A +A + + K+ GGR++ VGTT+ RL+ETA G + W G T+IFIT
Sbjct: 230 VMHSEWGQVSALSASDIMATKAAGGRVIPVGTTACRLIETAGAS-GTLAAWEGETDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G + K +Y HAI++ YRF+SYGD+S+L
Sbjct: 289 PGFEFQITDGLMTNFHLPKSTLMMLVSALMGSQRIKDIYAHAIANEYRFFSYGDSSILLP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|89054208|ref|YP_509659.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Jannaschia
sp. CCS1]
gi|122498901|sp|Q28RM8|QUEA_JANSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|88863757|gb|ABD54634.1| Queuosine biosynthesis protein [Jannaschia sp. CCS1]
Length = 355
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/345 (47%), Positives = 221/345 (64%), Gaps = 15/345 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IA RP PR SARL+V + L V+DLP+ L D +V N+T+VI A+L G
Sbjct: 15 IATRPARPRSSARLLVADGPETHDLT-----VADLPSMLRRGDRLVLNDTRVIPARLTGT 69
Query: 75 RFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVID 132
R + E I TL + +WS A+P + +K G+ + FS Q+ + A +D
Sbjct: 70 RTRMSAQGEVTARIEVTLMEPQADGTWSALAKPMRKLKAGEKI-IFSNALQADVHA--MD 126
Query: 133 KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVA 192
+ + L F++ G + + ++ G +PLPPYIA KR DARDY DYQT +AK G+VA
Sbjct: 127 E----GLRLAFNVEGDDFDAALNAAGAMPLPPYIAGKRAPDARDYHDYQTIWAKRAGAVA 182
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTA LHF +L+ L S G+ V FVTLHVGAGTF+PV V+D H MH+E G + A A
Sbjct: 183 APTASLHFDEHLMDALTSRGVDVTFVTLHVGAGTFLPVTVDDVTTHKMHAEWGEVRATAA 242
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+N+ K+ GGRI+ VGTT+LRL+E+A +DG I+P+ G T+IFI PGYR++ D LM+N
Sbjct: 243 AEINATKAAGGRIIPVGTTALRLIESA-AQDGTIHPFEGTTDIFIYPGYRWQITDALMTN 301
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
FHLPKSTLLMLVSA G + +Y HAI++ YRF+SYGD SLLF
Sbjct: 302 FHLPKSTLLMLVSALMGKDRMDAVYAHAIANQYRFFSYGDASLLF 346
>gi|84515554|ref|ZP_01002916.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Loktanella
vestfoldensis SKA53]
gi|84510837|gb|EAQ07292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Loktanella
vestfoldensis SKA53]
Length = 351
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/362 (46%), Positives = 232/362 (64%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL++ + I+D +V+DL L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRSSARLLLAQGDR-----IADQIVTDLVDILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+LNG R I TL + SWS +P K ++ G+++ F
Sbjct: 56 LNDTKVIPARLNGTRARSGEAGDTSARIEVTLLEPRADGSWSALVKPLKKLRDGEVV-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D L AT+ + + G+ L F+++G + + ++ VG +PLPPYIA KR DA D
Sbjct: 115 SAD----LSATMTGRGD-GQAYLQFNLTGDDFDAALNAVGAMPLPPYIAAKRAADAADMD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF LL L + G+ + +VTLHVGAGTF+PVKV+D +H
Sbjct: 170 DYQTYWAKHAGAVAAPTASLHFDGPLLQALAARGVTMSYVTLHVGAGTFLPVKVDDVSEH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K+ G R++ VGTT+LRL+E+A + G + PW+G T+IFIT
Sbjct: 230 KMHAEWGEVTATAAAQINATKAAGKRVIPVGTTALRLIESA-AKGGQLQPWTGPTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G++ K +Y HAI+ YRF+SYGD SLL
Sbjct: 289 PGFTFQIADGLMTNFHLPKSTLMMLVSALMGMDRIKAIYAHAIAERYRFFSYGDASLLLP 348
Query: 359 KR 360
R
Sbjct: 349 DR 350
>gi|296536218|ref|ZP_06898336.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseomonas
cervicalis ATCC 49957]
gi|296263440|gb|EFH09947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseomonas
cervicalis ATCC 49957]
Length = 360
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 218/359 (60%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF LP + IA P PRD+ARL+V + P + D V DLPA+L D +V
Sbjct: 12 LRAEDFDFALPEALIAQAPARPRDAARLLV-----AAPEGLRDQGVRDLPAWLRPGDLMV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L R E + L+ S W R +K ++ GDIL
Sbjct: 67 VNDTRVIPARLRA------RRGEARLEIMLNRAESGGMWHALVRNAKKLRPGDILTI--- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G L V+++ G L+ F +L + G IPLPPYIAR D DY
Sbjct: 118 EGAPELAPRVVERQEGGAALIDFGPDQGKLAAALEKAGEIPLPPYIARPDGPRPEDREDY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q +A+ G+VAAPTA LHFT LL+ L G+ +TLHVGAGTF+P++ ++ +H +
Sbjct: 178 QPIFAREPGAVAAPTASLHFTPGLLAALAERGVGQVSLTLHVGAGTFLPIRGDNPREHKL 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A ++N ++RGGRIV++GTT+LRLLE+A E G+++P+ G T+IF+ PG
Sbjct: 238 HAEWGHISEAAAASINETRARGGRIVAIGTTALRLLESAVDERGVVHPFRGLTDIFLLPG 297
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ FR+ D+L++NFHLPKS+L MLVSAF G + Y HA++ YRFYSYGD SLLF++
Sbjct: 298 HVFRSADLLLTNFHLPKSSLFMLVSAFAGQARMRDAYAHAVAQGYRFYSYGDASLLFRE 356
>gi|163736612|ref|ZP_02144031.1| Queuosine biosynthesis protein [Phaeobacter gallaeciensis BS107]
gi|161390482|gb|EDQ14832.1| Queuosine biosynthesis protein [Phaeobacter gallaeciensis BS107]
Length = 356
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 228/358 (63%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA RP PR SARL+V + I D V++L +L S D +V
Sbjct: 1 MKLSDFDFDLPDDRIATRPAVPRSSARLLVAEGDR-----IRDARVANLGQWLRSGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G+R + ++ TL + SW+ +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGPMAAKVEVTLLDPGADGSWAALLKPLKKVKLGEEIIF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT +++ G+ L F++SG + + ++ G +PLPPYIA KRP D +D
Sbjct: 115 ----SDTLSAT-LERIEDGQGHLKFNLSGTDFDAALAEAGAMPLPPYIAAKRPADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDDALLAELQAKGVEISYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 RMHAEWGRVSAEAATEIAATKAAGGRVIPVGTTALRLIESA-GQSGAIQPWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ F D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFTFHVADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALAEEYRFFSYGDASLL 346
>gi|84503044|ref|ZP_01001140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
batsensis HTCC2597]
gi|84388588|gb|EAQ01460.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
batsensis HTCC2597]
Length = 348
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 226/358 (63%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I D +V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEGLIATRPARPRSSARLLVAEGD-----AIHDAVVRDLTDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R ++ E I TL + W+ +P K +++G+++ F
Sbjct: 56 LNDTRVIPARLAGKRARDSDQGPTEARIDVTLLEPRASGHWAALIKPLKKVREGEVIRF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D +RL + G+ LL F++ G + +R ++ G +PLPPYIA RP D RD
Sbjct: 115 SDDLSARLTGR-----DEGQGLLEFNLKGEDFDRALAEAGAMPLPPYIAAMRPPDDRDKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL R+ +G+++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARRSGAVAAPTASLHFDAPLLDRIAGMGVEMTHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + ++ GGRI+ VGTT+LRL+E+A G I PW G T+IFI
Sbjct: 230 RMHAEWGEVTAQAADEIAATRAGGGRIIPVGTTALRLIESA-ARSGQIGPWRGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D LM+NFHLP+STL+MLVSA G E + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFEFRVTDALMTNFHLPRSTLMMLVSALMGQERIRSVYDHAVARKYRFFSYGDASLL 346
>gi|330991057|ref|ZP_08315011.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter sp. SXCC-1]
gi|329761878|gb|EGG78368.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter sp. SXCC-1]
Length = 397
Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 169/358 (47%), Positives = 224/358 (62%), Gaps = 14/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +FDF LPP RIA P PRDSARL+ V ++ P I D V DLP L + D +V
Sbjct: 49 LVSDFDFTLPPDRIADHPARPRDSARLLDV--PVAGP--IMDRHVRDLPGCLRAGDILVA 104
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL+ R I TL + SW V AR ++ + GD L F
Sbjct: 105 NDTAVIPAQLSATRGA------ARIGITLDRILPDGSWHVLARNARRLHPGDTLAF---- 154
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G S + A V+ + G++ L FS+ G ++ + G + LPPYIAR +D DY
Sbjct: 155 GASPVTADVLACGDAGDVTLRFSVEGAAFDQFLHDTGHLALPPYIARPEGPTEQDRKDYA 214
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ +G+VAAPTAGLHFT +LL+ L G+ +TLHVGAGTF+P++ E H MH
Sbjct: 215 TIFAQHRGAVAAPTAGLHFTPDLLAALDHAGVLRQTLTLHVGAGTFLPMRSEQISAHRMH 274
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A+ +N+ ++ GGRI++VGTTSLRLLE+AT EDG+++P+ G T IFI PGY
Sbjct: 275 AERGTITPHAARRINAARAAGGRIIAVGTTSLRLLESATDEDGVVHPFHGETAIFIKPGY 334
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
RFRAVD+L++NFHLP+STL MLV AF G + Y HAI+ YRFYSYGD LL +
Sbjct: 335 RFRAVDMLLTNFHLPRSTLFMLVCAFGGYRRMQAAYAHAIAKGYRFYSYGDACLLHRS 392
>gi|86138785|ref|ZP_01057357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. MED193]
gi|85824432|gb|EAQ44635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. MED193]
Length = 356
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 163/362 (45%), Positives = 227/362 (62%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V P+ ++D + DL L D +V
Sbjct: 1 MKLSDFDFDLPDALIATRPATPRSSARLLVATPD-----QMTDGHIGDLVDLLQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G+R R +I TL + SWS +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGRMAAKIEVTLLDPKADGSWSALLKPLKKVKIGETVAF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++ G+ LL F++ G + + ++ G +PLPPYIA KR D +D
Sbjct: 115 ----SDALTAELVGV-TEGQGLLRFNLVGDDFDAALNAAGAMPLPPYIAAKRAADDQDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF +LL+ L + G++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARHSGAVAAPTASLHFDQDLLAVLKAKGVQFTYVTLHVGAGTFLPVKVEDVTSH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A G + PW G T+IFI
Sbjct: 230 KMHAEWGRVSAEAAAEIAATKAAGGRVIPVGTTALRLIESA-ARGGTVQPWEGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F A D LM+NFHLPKSTLLML+SA G + +++Y+HA++ YRF+SYGD SLL
Sbjct: 289 PGFVFHAADALMTNFHLPKSTLLMLISALMGQDRVREIYEHAVNSRYRFFSYGDGSLLLP 348
Query: 359 KR 360
+
Sbjct: 349 QE 350
>gi|146277887|ref|YP_001168046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides ATCC 17025]
gi|166216745|sp|A4WTM7|QUEA_RHOS5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145556128|gb|ABP70741.1| Queuosine biosynthesis protein [Rhodobacter sphaeroides ATCC 17025]
Length = 346
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/358 (46%), Positives = 218/358 (60%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL + D +V
Sbjct: 1 MKLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFHPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NNT+VI A+L G R R E +I TL + W A+P + +K+G+ + F
Sbjct: 56 LNNTRVIPARLVGTR----TRGEACAKIEITLMEPAAAGGWRALAKPLRKLKEGETIRF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A V +K T ++ LVF +G + + ++ G +PLPPYIA +R DA+D
Sbjct: 111 ----SDALSAEVAEKGET-DLRLVFDRAGEDFDAALAEAGAMPLPPYIAARRAPDAQDRE 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H
Sbjct: 166 DYQTVFARHAGAVAAPTASLHFDRPLLEALAANGVAFTEVTLHVGAGTFLPVKVEDVTTH 225
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + K+ GGR++ VGTT+LRL+E+A+ G I PW G T+IFI
Sbjct: 226 RMHAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESASAA-GTIRPWRGETDIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRFR D LM+NFHLPKSTLLMLVSA G + +Y HA+ H YRF+SYGD SLL
Sbjct: 285 PGYRFRVTDALMTNFHLPKSTLLMLVSALMGEARIRAIYDHAVRHDYRFFSYGDASLL 342
>gi|126728575|ref|ZP_01744390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sagittula
stellata E-37]
gi|126710505|gb|EBA09556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sagittula
stellata E-37]
Length = 354
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 230/358 (64%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR +ARL+V VISD V++LP +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPARPRTAARLLVCDGG-----VISDATVAELPDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVR--FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+GVR E +I TL + WS +P K ++ G+I+ F
Sbjct: 56 LNDTQVIPARLSGVRRRVGEAGETEAQIEVTLLEPRADGCWSALLKPLKKVRDGEIVRF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D LEA ++ + + G+ +L F+++ + + ++ G +PLPPYIA +RP DA+D
Sbjct: 115 SDD----LEAMLMSRQD-GQAILRFNLAAADFDAALNAAGAMPLPPYIAARRPADAQDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTA LHF +LL R+ +G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNRGAVAAPTASLHFDESLLKRIADMGVAFTHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + ++ GGR++ VGTT+LRL+E+A E G I P+ G T+IFI
Sbjct: 230 RMHGEWGEVTPQAAAEIAATRAAGGRVIPVGTTALRLIESAARE-GEIAPFHGVTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ F D LM+NFHLPKSTLLMLVSA G + +++Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFSFNVTDALMTNFHLPKSTLLMLVSALMGQDCIREVYAHAVAEDYRFFSYGDASLL 346
>gi|260433384|ref|ZP_05787355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter lacuscaerulensis ITI-1157]
gi|260417212|gb|EEX10471.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter lacuscaerulensis ITI-1157]
Length = 348
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 163/360 (45%), Positives = 223/360 (61%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D V +LP +L D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPANPRTSARLLVAQGD-----DIADDRVFNLPDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L+G R H N + +S + + + +W+ +P K ++ G+ +
Sbjct: 56 LNDTRVIPARLSGRR--HRNSAQGPVSAAIEATLLDPQADGTWAALLKPLKKVRVGEEI- 112
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
FS D + V+++ G+ L F+++G + +R + G +PLPPYIA KRP D RD
Sbjct: 113 VFSGD-----LSAVLERVAEGQAYLRFNLTGEDFDRALEQAGAMPLPPYIAAKRPADERD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTA LHF LL L G++ VTLHVGAGTF+PVKVED
Sbjct: 168 KTDYQTVWARHSGAVAAPTASLHFDEALLKTLTERGVEFTHVTLHVGAGTFLPVKVEDVT 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IF
Sbjct: 228 THKMHAEWGRVSPQAAAEIAATKAAGGRVIPVGTTALRLIESA-ARGGRIEPWEGETDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+ F D LM+NFHLPKSTLLMLVSA G + ++Y HAI+ YRF+SYGD SLL
Sbjct: 287 IYPGFTFHVTDALMTNFHLPKSTLLMLVSALMGKDRMLRIYDHAIACRYRFFSYGDASLL 346
>gi|294083598|ref|YP_003550355.1| Queuosine biosynthesis protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663170|gb|ADE38271.1| Queuosine biosynthesis protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 386
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 222/368 (60%), Gaps = 28/368 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLPP RIA P PRDSARL+ +LS I+D V DLP L + D ++
Sbjct: 17 MKLSDFDFDLPPDRIATAPAQPRDSARLL----DLSGA-AIADRHVGDLPDLLRAGDLLI 71
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNS-WSVYARPSKVIKKGDIL 115
N+T VI A+L G R + IS TLH + N+ W V+A+P+K + DI+
Sbjct: 72 VNDTAVIPARLIG------KRGDARISVTLHKYEGHKNGGNAIWRVFAKPAKKCRPDDII 125
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVF-------SISGIELERQISLVGTIPLPPYIAR 168
F G A V+ + G++ L F ++ L + GT+PLPPYIAR
Sbjct: 126 MFAPDFG-----ARVLGRGEGGDVELAFIDPRSGNALDTDSLNAGLDTYGTMPLPPYIAR 180
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ D+ DYQT +A +G+VAAPTAGLHFT L S L + G+ + VTLHVGAGTF+
Sbjct: 181 PDGVLDSDHEDYQTMFASQRGAVAAPTAGLHFTDGLTSALQAKGVAIAAVTLHVGAGTFL 240
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV VE +H MHSE G I A A + + K GGR+++VGTTSLR+LE + G I
Sbjct: 241 PVTVETIAEHKMHSEWGAIPADVAAKIIATKQAGGRVIAVGTTSLRILEASFAALGHIGH 300
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
++G T+IFITPG+ F VD+LM+NFHLPKSTLLMLVSAF G Y HAI+ YRF+
Sbjct: 301 FAGETDIFITPGFSFNVVDMLMTNFHLPKSTLLMLVSAFAGHAPIMAAYDHAIASGYRFF 360
Query: 349 SYGDTSLL 356
SYGD LL
Sbjct: 361 SYGDACLL 368
>gi|149914724|ref|ZP_01903254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. AzwK-3b]
gi|149811517|gb|EDM71352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. AzwK-3b]
Length = 350
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/363 (46%), Positives = 225/363 (61%), Gaps = 23/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I D +V DL FL D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPARPRSSARLLVAQGD-----AIRDAIVRDLGDFLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE-------KEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
N+T VI A+L+G+R RRE +I TL WS +P K ++ G+
Sbjct: 56 LNDTAVIPARLSGMR-----RREGPEGVTQAKIEVTLLEPGPEGDWSALVKPLKKVRDGE 110
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
++ F + LEA V+ + G+ LL F++ G + ++ G +PLPPYIA +R D
Sbjct: 111 VIVF-----GAGLEAEVLAR-REGQGLLRFNLEGEAFDTALNDAGAMPLPPYIAARRAAD 164
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A+D DYQT +A+ +G+VAAPTA LHF + LL RL ++G+ VTLHVGAGTF+PVKVE
Sbjct: 165 AQDRTDYQTVWARHKGAVAAPTASLHFDAELLERLEAMGVTFSHVTLHVGAGTFLPVKVE 224
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H MH+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T
Sbjct: 225 DVTTHRMHAEWGRVSEAAAAEIAATKAAGGRVIPVGTTALRLIESAAQASGAIAPWEGET 284
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG+ FR D LM+NFHLPKSTL+MLVSA G + K +Y HA+ + YRF+SYGD
Sbjct: 285 DIFIYPGFTFRVADALMTNFHLPKSTLMMLVSALMGQDRIKDIYDHAVENRYRFFSYGDA 344
Query: 354 SLL 356
SLL
Sbjct: 345 SLL 347
>gi|56697089|ref|YP_167452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
pomeroyi DSS-3]
gi|81558479|sp|Q5LRA3|QUEA_SILPO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56678826|gb|AAV95492.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
pomeroyi DSS-3]
Length = 349
Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 162/345 (46%), Positives = 217/345 (62%), Gaps = 14/345 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IA RP PR SARL+V + ISD +V DLP +L D +V N+T+VI A+L+G
Sbjct: 15 IATRPAQPRSSARLLVARGD-----AISDAVVRDLPDWLRPGDRLVLNDTRVIPARLSGT 69
Query: 75 RFCHINRR--EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVID 132
R + I TL + SWS A+P + +++G+ + FS D + +EA
Sbjct: 70 RQRQSAQGPVTARIEITLLEPRADGSWSALAKPLRKLREGETI-IFSNDLSADVEAI--- 125
Query: 133 KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVA 192
G+ LL F+++G + + ++ G +PLPPYIA KR D +D DYQT +A+ G+VA
Sbjct: 126 --EDGQALLRFNLTGPDFDAALAQAGAMPLPPYIAAKRAADEQDKTDYQTVWARHSGAVA 183
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTA LHF LL+ L + G+ VTLHVGAGTF+PVKVED H MH+E G + A A
Sbjct: 184 APTASLHFDDTLLAALAAHGVTFTHVTLHVGAGTFLPVKVEDVTTHKMHAEWGRVSAEAA 243
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+ + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG+ FR D LM+N
Sbjct: 244 AEIAATKAAGGRVIPVGTTALRLIESA-ARGGQIAPWEGDTDIFIYPGFDFRVADGLMTN 302
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
FHLPKSTLLMLVSA G E +K+Y HA+ + YRF+SYGD SLL
Sbjct: 303 FHLPKSTLLMLVSALMGQESIRKIYAHAVENRYRFFSYGDASLLL 347
>gi|77463529|ref|YP_353033.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides 2.4.1]
gi|91207401|sp|Q3J252|QUEA_RHOS4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77387947|gb|ABA79132.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides 2.4.1]
Length = 346
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 212/356 (59%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E + TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTR--GEAEARVEVTLMEPAAAGGWRAMAKPLRKLKPGETIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T ++ LVF +G + ++ G +PLPPYIA +R D +D DY
Sbjct: 111 --SDALSAEVAEKGET-DLRLVFDRAGAAFDAALAEAGAMPLPPYIAARRAPDTQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARGVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTETAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLL 342
>gi|254509984|ref|ZP_05122051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium KLH11]
gi|221533695|gb|EEE36683.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium KLH11]
Length = 353
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/360 (45%), Positives = 221/360 (61%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA RP PR SARL+V + I D V LP L D +V
Sbjct: 6 MKLSDFDFHLPEHLIATRPASPRSSARLLVAQED-----AIQDRNVFHLPDLLQPGDRLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLH---MRVSPNS-WSVYARPSKVIKKGDILH 116
N+T+VI A+L+G R H + + +S + + P+ W+ +P K +K G+ +
Sbjct: 61 LNDTRVIPARLSGRR--HRDSAQGPVSAAIEATLLEPQPDGCWAALIKPLKKVKPGEEI- 117
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
FS D L AT +D+ + G+ L F+++G + + + G +PLPPYIA KR D +D
Sbjct: 118 VFSDD----LSAT-LDRVSDGQAYLRFNLTGEDFDHALEQAGAMPLPPYIAAKRAADEQD 172
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED
Sbjct: 173 KTDYQTVWARNAGAVAAPTASLHFDDTLLRALAARGVAFTHVTLHVGAGTFLPVKVEDVT 232
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IF
Sbjct: 233 THKMHAEWGRVSAQAAAEIAATKAAGGRVIPVGTTALRLIESA-ARGGQIAPWEGETDIF 291
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+RF D LM+NFHLPKSTLLMLVSA G + + +Y HAI+ YRF+SYGD SLL
Sbjct: 292 IYPGFRFHVTDALMTNFHLPKSTLLMLVSALMGQDRVRTIYDHAIAEEYRFFSYGDASLL 351
>gi|89069964|ref|ZP_01157296.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
granulosus HTCC2516]
gi|89044412|gb|EAR50543.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
granulosus HTCC2516]
Length = 349
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 225/359 (62%), Gaps = 13/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA+RP PR SARL++ + I D +VS+LP L D +V
Sbjct: 1 MQLSDFDFDLPDELIAVRPARPRSSARLLLAEGD-----AIGDRIVSELPRILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R E I TL + WS +P + +++G+ + F
Sbjct: 56 LNDTRVIPARLTGTRTRPGAAGEGVARIEVTLLEPRADGLWSALVKPLRKLREGEEVVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A+ ++ G+ LL F+ +G + + ++ G +PLPPYIA +RP DA D
Sbjct: 115 ----SPRLTAS-LEAREAGQGLLRFNCTGEDFDAALAEAGAMPLPPYIAARRPADAADKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL + + G+++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWAERPGAVAAPTASLHFDAPLLEAIAARGVEITRVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + + GGR++ VGTT+LRL+ETA G I PW+G T+IFI
Sbjct: 230 RMHAEWGEVTEAAAAEIAATRGAGGRVIPVGTTALRLIETAARASGEIAPWTGETDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ FR D LM+NFHLP+STL+MLVSAF G+E + +Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVADGLMTNFHLPRSTLMMLVSAFMGMERVRAIYAHAVAERYRFFSYGDASLLL 348
>gi|126462385|ref|YP_001043499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides ATCC 17029]
gi|166216744|sp|A3PK61|QUEA_RHOS1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126104049|gb|ABN76727.1| Queuosine biosynthesis protein [Rhodobacter sphaeroides ATCC 17029]
Length = 346
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 212/356 (59%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E + TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTR--GEAEARVEVTLMEPAAAGGWRAMAKPLRKLKPGETIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T ++ LVF +G + ++ G +PLPPYIA +R DA+D DY
Sbjct: 111 --SDALSAEVAEKGET-DLRLVFDRAGAAFDAALAEAGAMPLPPYIAARRAPDAQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + + VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARSVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLL 342
>gi|221639392|ref|YP_002525654.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides KD131]
gi|254764285|sp|B9KT07|QUEA_RHOSK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221160173|gb|ACM01153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides KD131]
Length = 346
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/356 (46%), Positives = 213/356 (59%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E I TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTR--GEAEARIEVTLMEPAAAGGWRAMAKPLRKLKPGETIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T ++ LVF +G + ++ G +PLPPYIA +R DA+D DY
Sbjct: 111 --SDALSAEVAEKGET-DLRLVFDRAGAAFDAALADAGAMPLPPYIAARRAPDAQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARGVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLL 342
>gi|313623657|gb|EFR93813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua FSL J1-023]
Length = 342
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGE---IKDQHFTDIISYLNKGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTQNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +KS GG++V+VGTTS+R LET A+ DG + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEESADRINKIKSAGGKVVAVGTTSIRTLETIASRHDGKLIAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYKFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGD 337
>gi|290893933|ref|ZP_06556909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-071]
gi|290556471|gb|EFD90009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-071]
Length = 342
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 222/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGD 337
>gi|16800634|ref|NP_470902.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua Clip11262]
gi|21263888|sp|Q92BI3|QUEA_LISIN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|16414053|emb|CAC96797.1| lin1566 [Listeria innocua Clip11262]
gi|313618792|gb|EFR90688.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua FSL S4-378]
Length = 342
Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 220/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGE---IKDQHFTDIISYLNKGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYEV-LEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTQNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +KS GG++V+VGTTS+R LET A+ DG + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEESADRINKIKSAGGKVVAVGTTSIRTLETIASRHDGKLIAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYEFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGD 337
>gi|260427502|ref|ZP_05781481.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citreicella
sp. SE45]
gi|260421994|gb|EEX15245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citreicella
sp. SE45]
Length = 349
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 225/358 (62%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V + ++D +V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPANPRSSARLLVADGD-----TLTDAVVRDLTQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R + +I TL + W+ +P K +++G+ + F
Sbjct: 56 LNDTKVIPARLSGTRERDGAQGLTRAQIEVTLLEPRADGCWAALVKPLKKLREGETVVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S + V++ + G+ LL F++ G + + ++ G +PLPPYIA +R DA+D
Sbjct: 115 -----SDALSAVLESRDEGQGLLRFNLVGEDFDAALAEAGAMPLPPYIAARRAADAQDKQ 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWAERKGAVAAPTASLHFDEPLLESLRAHGVAFTKVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + K+ GGR++ VGTT+LRLLETA + G I PW G T+IFI
Sbjct: 230 RMHGEWGEVSDSAAAEIAATKAAGGRVIPVGTTALRLLETAARDTGAIAPWQGVTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D LM+NFHLPKSTL+MLVSA G E K++Y HAI+ YRF+SYGD+SLL
Sbjct: 290 PGFTFRVTDALMTNFHLPKSTLMMLVSALMGQERMKRIYDHAITERYRFFSYGDSSLL 347
>gi|16803571|ref|NP_465056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes EGD-e]
gi|47097028|ref|ZP_00234601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 1/2a F6854]
gi|224499808|ref|ZP_03668157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes Finland 1988]
gi|224501529|ref|ZP_03669836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-561]
gi|254828235|ref|ZP_05232922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N3-165]
gi|254829710|ref|ZP_05234365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 10403S]
gi|254898303|ref|ZP_05258227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J0161]
gi|254912205|ref|ZP_05262217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J2818]
gi|254936533|ref|ZP_05268230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes F6900]
gi|21263872|sp|Q8Y6Z9|QUEA_LISMO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|16410960|emb|CAC99609.1| lmo1531 [Listeria monocytogenes EGD-e]
gi|47014610|gb|EAL05570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 1/2a F6854]
gi|258600623|gb|EEW13948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N3-165]
gi|258609127|gb|EEW21735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes F6900]
gi|293590178|gb|EFF98512.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J2818]
Length = 342
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGD 337
>gi|284801921|ref|YP_003413786.1| hypothetical protein LM5578_1676 [Listeria monocytogenes 08-5578]
gi|284995063|ref|YP_003416831.1| hypothetical protein LM5923_1628 [Listeria monocytogenes 08-5923]
gi|284057483|gb|ADB68424.1| hypothetical protein LM5578_1676 [Listeria monocytogenes 08-5578]
gi|284060530|gb|ADB71469.1| hypothetical protein LM5923_1628 [Listeria monocytogenes 08-5923]
Length = 342
Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVGEQYRFFSFGD 337
>gi|217964322|ref|YP_002350000.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HCC23]
gi|254764281|sp|B8DHL7|QUEA_LISMH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|217333592|gb|ACK39386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HCC23]
gi|307571112|emb|CAR84291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes L99]
Length = 342
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K +GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKVQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGD 337
>gi|315282447|ref|ZP_07870859.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
marthii FSL S4-120]
gi|313613910|gb|EFR87642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
marthii FSL S4-120]
Length = 342
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGE---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L F+ GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFTYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAARINQIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGD 337
>gi|254852155|ref|ZP_05241503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-503]
gi|254931466|ref|ZP_05264825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HPB2262]
gi|300764802|ref|ZP_07074792.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N1-017]
gi|258605458|gb|EEW18066.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-503]
gi|293583018|gb|EFF95050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HPB2262]
gi|300514478|gb|EFK41535.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N1-017]
gi|328465567|gb|EGF36796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 1816]
gi|328474891|gb|EGF45691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 220]
Length = 342
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGD 337
>gi|254518553|ref|ZP_05130609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. 7_2_43FAA]
gi|226912302|gb|EEH97503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. 7_2_43FAA]
Length = 342
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P+ RDS+RLMV+ N I D+ +LN D +V
Sbjct: 1 MKVSDFDFDLPEELIAQHPLEKRDSSRLMVLDKNTG---EIEHKSFHDVIEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + I L R+ + W A+P K K G F
Sbjct: 58 LNNTRVMPARLIGEKEGTGGK----IEFLLLKRIEGDRWECLAKPGKRAKVGQKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L TV+D G ++ FS GI E+ + +G +PLPPYI K R Y
Sbjct: 111 -GEGKLICTVVDIVEEGNRIIEFSYEGI-FEQVLDELGEMPLPPYITEKLEDKER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PVKVED ++HIM
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKAKGVNIAYLTLHVGLGTFRPVKVEDINEHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A +N K RG ++++VGTTS R LET ++G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDNENADLINETKKRGNKVIAVGTTSTRTLETIGDDNGFVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ +D L++NFHLP+STL+MLVSA G E Y A+ YRF+S+GD+ L+
Sbjct: 285 YKYKVIDELITNFHLPESTLIMLVSALAGKEHVMNAYNEAVKEKYRFFSFGDSMLI 340
>gi|226224132|ref|YP_002758239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes Clip81459]
gi|254824410|ref|ZP_05229411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-194]
gi|254992899|ref|ZP_05275089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-064]
gi|255520699|ref|ZP_05387936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-175]
gi|259551458|sp|C1KVH8|QUEA_LISMC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|225876594|emb|CAS05303.1| Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|293593645|gb|EFG01406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-194]
Length = 342
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGD 337
>gi|223933305|ref|ZP_03625294.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis 89/1591]
gi|330832602|ref|YP_004401427.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis ST3]
gi|223898035|gb|EEF64407.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis 89/1591]
gi|329306825|gb|AEB81241.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis ST3]
Length = 342
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/355 (46%), Positives = 216/355 (60%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDFDLP IA P+ RDS++L+++ +V S DH++ L N DA
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKQS-MVDSHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + + L N W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGYKPETMGH----VELLLLKNTQGNQWEVLAKPAKRLKVGTTVAF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL AT++++ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 ---GDGRLTATIVEELEHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK----LEDRE 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 163 RYQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLEADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD
Sbjct: 283 KPGYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGD 337
>gi|51892303|ref|YP_074994.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Symbiobacterium thermophilum IAM 14863]
gi|81610582|sp|Q67Q93|QUEA_SYMTH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51855992|dbj|BAD40150.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Symbiobacterium thermophilum IAM 14863]
Length = 341
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 213/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP IA +PV PRD++RLMVVH I DLP +L D +V
Sbjct: 1 MRLSDFDYDLPKELIAQKPVEPRDASRLMVVH---RASGAIEHRCFRDLPEYLRPGDGLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+V+ A+L G R + + L R+ + W +P K + G+ + F
Sbjct: 58 INETRVMPARLLGSR----EQTGGAMEVLLLKRLDRDRWETLVKPGKKARPGERIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L TV+ + G ++ F G+ E + +G +PLPPYI + R Y
Sbjct: 111 -GDGLLVGTVVGPTDYGGRVIDFHYEGV-FENLLERLGQMPLPPYIHEQLEEPER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT+ LL RL + G++++ +TLHVG GTF PV+VED H M
Sbjct: 165 QTVYAREWGSAAAPTAGLHFTAELLDRLAARGVEIHRITLHVGLGTFRPVEVEDPTQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+V+ GGR+V+VGTTS+R LET EDG + P G+T+IFI PG
Sbjct: 225 HSEFYHVSPEAAAGINAVRKGGGRLVAVGTTSVRTLETVADEDGTVRPGEGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+AVD L++NFHLPKSTLLMLVSA G + + Y+ A++ YRF+S+GD L+
Sbjct: 285 YRFKAVDALVTNFHLPKSTLLMLVSALAGHDLIMRAYREAVAQRYRFFSFGDAMLIL 341
>gi|222153368|ref|YP_002562545.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus uberis 0140J]
gi|222114181|emb|CAR42709.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus uberis 0140J]
Length = 342
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/353 (46%), Positives = 214/353 (60%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS+RL+++ ++D + LN DA+V
Sbjct: 1 MHTNDFDFDLPEELIAQTPLEKRDSSRLLIIDHQTKE---MTDSHFDQIVDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGEK----PDTHGHVELLLLKNTKEDQWEVLAKPAKRLKVGSKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ + G ++ FS SGI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVIEELDHGGRIVEFSYSGIFLEVLESL-GEMPLPPYIHEKLEDSER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V+ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEALLKKIKDKGVHLVYLTLHVGLGTFRPVSVDSVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+V+VGTTS+R LET T+ DG I SG+TNIFI P
Sbjct: 225 HSEFYHLSEEAAQTLRQVKANGGRLVAVGTTSIRTLETIGTKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ VD +NFHLPKSTL+MLVSAF G E + YQHA++ YRF+S+GD
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAVNEKYRFFSFGD 337
>gi|46907759|ref|YP_014148.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 4b F2365]
gi|67460874|sp|Q71ZD9|QUEA_LISMF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|46881028|gb|AAT04325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes serotype 4b str. F2365]
Length = 342
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 220/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYGKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGD 337
>gi|266622484|ref|ZP_06115419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
hathewayi DSM 13479]
gi|288865792|gb|EFC98090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
hathewayi DSM 13479]
Length = 365
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 155/352 (44%), Positives = 213/352 (60%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F+F+LP IA P+ R S+RL+V+ I D+ ++L D +V
Sbjct: 1 MNVKDFNFELPQELIAQDPLEDRSSSRLLVLDKKTG---EIEHRTFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ E +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----EGTEAKIEILLLKRRENDIWETLVKPGKKAKIGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV+D + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLTGTVVDIVDEGNRLIQFSYEGI-FEEILDRLGQMPLPPYITHQ----LKDQTRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ + ++G+ + VTLHVG GTF PVKV++ +DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLAEIEAMGVVIAHVTLHVGLGTFRPVKVDEIEDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K GGRIV VGTTS R +E+A+++DG++ SG+T IFI PG
Sbjct: 225 HSEFYIVDEAEAKKVNDTKKNGGRIVCVGTTSCRTVESASSDDGVLKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD
Sbjct: 285 YRFKTLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIRERYRFFSFGD 336
>gi|254476236|ref|ZP_05089622.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. R11]
gi|214030479|gb|EEB71314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. R11]
Length = 353
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 161/344 (46%), Positives = 216/344 (62%), Gaps = 14/344 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IA RP PR SARL+V + ISD V+DL +L D +V N+TKVI A+L+G
Sbjct: 15 IATRPAVPRTSARLLVAEADQ-----ISDATVADLGQWLRPGDRLVLNDTKVIPARLSGQ 69
Query: 75 RFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVID 132
R + ++ TL + SWS +P K +K G+ + FS +RL D
Sbjct: 70 RHRDTAQGPMAAKVEVTLLEPGADGSWSALLKPLKKVKLGEEI-IFSDQLSARL-----D 123
Query: 133 KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVA 192
+ G+ L F++SG + + ++ G +PLPPYIA KR D +D DYQT +A+ G+VA
Sbjct: 124 RVEDGQGYLAFNLSGDDFDTALAEAGAMPLPPYIAAKRAADEQDKTDYQTVWARNSGAVA 183
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTA LHF LL++L +G+ +VTLHVGAGTF+PVKVED H MHSE G + A A
Sbjct: 184 APTASLHFDETLLAQLREMGVSFSYVTLHVGAGTFLPVKVEDVTTHKMHSEWGRVSADAA 243
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+ + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG+ F D LM+N
Sbjct: 244 AEIAATKAAGGRVIPVGTTALRLIESA-ARSGAIEPWEGDTDIFIYPGFTFNVADALMTN 302
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
FHLPKSTL+MLVSA G E +++Y+HA+S YRF+SYGD SLL
Sbjct: 303 FHLPKSTLMMLVSALMGQERIREIYEHAVSQRYRFFSYGDASLL 346
>gi|315303291|ref|ZP_07873926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
ivanovii FSL F6-596]
gi|313628338|gb|EFR96836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
ivanovii FSL F6-596]
Length = 342
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 219/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATGE---IKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNTWEALVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALQATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKEKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++++VGTTS+R LET A+ +G I SG+T+IFI+P
Sbjct: 225 HSEFYRLTEEAAERINRVKETGGKVIAVGTTSIRTLETIASRHEGNIVAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY FRAVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFRAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEEQYRFFSFGD 337
>gi|83309697|ref|YP_419961.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase
[Magnetospirillum magneticum AMB-1]
gi|82944538|dbj|BAE49402.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase
[Magnetospirillum magneticum AMB-1]
Length = 291
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/298 (51%), Positives = 198/298 (66%), Gaps = 12/298 (4%)
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKVI A+L G R + TLH R + W +ARP+K +K GD + F
Sbjct: 1 MVFNDTKVIPARLLG------RRGLAGVELTLHQRTGLSQWKAFARPAKKLKPGDRVDF- 53
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
A V +K GE+ L F SG +L + G +PLPPYI R+ D RD
Sbjct: 54 ----AEGFSAVVAEKGEMGEVTLDFDRSGEDLMVALETHGHLPLPPYI-RQGTADERDKG 108
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTAGLHFT LL+ L + G+K VTLHVGAGTF+PVKV+DTDDH
Sbjct: 109 DYQTVFAREKGAVAAPTAGLHFTPELLAALDARGVKRVTVTLHVGAGTFLPVKVDDTDDH 168
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH EIG + TA A+N+ ++ GGR+V+VGTTS RLLE+A G ++P+ G T+IFIT
Sbjct: 169 RMHQEIGVVTPETAAAVNAARAAGGRVVAVGTTSARLLESAADPLGTLHPFDGATDIFIT 228
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR VD+L++NFHLP+STL ML+SAF G+E K Y+HA + YRFYSYGD LL
Sbjct: 229 PGHVFRQVDVLLTNFHLPRSTLFMLISAFAGLERMKAAYEHAKAAGYRFYSYGDCCLL 286
>gi|303230199|ref|ZP_07316967.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-134-V-Col7a]
gi|302515125|gb|EFL57099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-134-V-Col7a]
Length = 341
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 216/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA PV PRD++RL+ + ++ H DL L + D +V
Sbjct: 1 MKVTDFDYDLPEELIAQHPVEPRDTSRLLTLD-KITGEYTHKAHFY-DLLDELQAGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQR----EGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL+ATV+DK + G ++ F+ G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DERLKATVLDKTDFGGRIVEFTCDGV-FDDIIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV VE +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSVETIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N KS+G RI++VGTTS+R LE+A+T+DGI++ SG+T IFI PG
Sbjct: 225 HSEFYSVSEDTARRINEAKSKGKRIIAVGTTSIRTLESASTDDGILHATSGWTKIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMVDALVTNFHLPQSTLLMLISALAGREHCLAAYKAAVKERYRFFSFGDAMFI 340
>gi|154483721|ref|ZP_02026169.1| hypothetical protein EUBVEN_01425 [Eubacterium ventriosum ATCC
27560]
gi|149735631|gb|EDM51517.1| hypothetical protein EUBVEN_01425 [Eubacterium ventriosum ATCC
27560]
Length = 380
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 209/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++ +DLP IA P+ R S+RLMV+ + I H+ D+ +LN ND +V
Sbjct: 39 MSLHDYYYDLPEELIAQDPLEDRSSSRLMVLDKDTG---EIEHHIFKDIIDYLNPNDCLV 95
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 96 INDTKVIPARLYGSKVG----TDAKIEVLLLKRKENDVWETLVKPGKKCKPGTVISF--- 148
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F+ GI E + +G +PLPPYI K R Y
Sbjct: 149 -GDGILTGEVIDVVEEGNRLIKFTYEGI-FEEVLDKLGEMPLPPYITHKLEDKNR----Y 202
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ GIK+ VTLHVG GTF PVKVE+ +H M
Sbjct: 203 QTVYAKYEGSAAAPTAGLHFTKELLEKIKEKGIKIAHVTLHVGLGTFRPVKVENILEHHM 262
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A +N ++ GGR+++VGTTS R LET T E+GI++ SG+T IFI PG
Sbjct: 263 HSEFYMVDEEDANMINECRANGGRVIAVGTTSTRTLETVTDENGIVHSGSGWTQIFIYPG 322
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y A+ YRF+S+GD +
Sbjct: 323 YQFKAIDCLITNFHLPESTLLMLVSALAGRENVLNAYNKAVEEKYRFFSFGDAMFI 378
>gi|303231808|ref|ZP_07318524.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-049-V-Sch6]
gi|302513515|gb|EFL55541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-049-V-Sch6]
Length = 341
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 216/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA PV PRD++RL+ + ++ H DL L + D +V
Sbjct: 1 MKVTDFDYDLPEELIAQHPVEPRDTSRLLTLD-KITGEYTHKAHFY-DLLDELQAGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQR----EGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL+ATV+DK + G ++ F+ G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLKATVLDKTDFGGRIVEFTCDGV-FDDIIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV VE +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSVETIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N KS+G RI++VGTTS+R LE+A+T+DGI++ SG+T IFI PG
Sbjct: 225 HSEFYSVSEDTARRINEAKSKGKRIIAVGTTSIRTLESASTDDGILHATSGWTKIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMVDALVTNFHLPQSTLLMLISALAGREHCLAAYKAAVKERYRFFSFGDAMFI 340
>gi|304317012|ref|YP_003852157.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778514|gb|ADL69073.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 341
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 216/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF +DLP IA P+ RD +RLM+++ I + ++ ++LN ND +V
Sbjct: 1 MNLHEFYYDLPEELIAQEPLKNRDESRLMILN---RLTGEIKHDIFKNIISYLNPNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GVR +I L R+S + W + +P + K G F
Sbjct: 58 LNDTKVIPARLIGVR----EDTGGKIEFVLLKRLSSDEWEILVKPGRRAKIGSKFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI + G ++ FS GI E + +G +P+PPYI +K D Y
Sbjct: 111 -GNGELKAEVISNTDVGGRIVRFSYEGI-FEEVLDKLGEMPVPPYIKKK----LEDKNMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL + G+K FVTLHVG GTF PVK E + H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNKLLDDIRKYGVKTVFVTLHVGLGTFRPVKEEVIEKHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + AQA+N+ + GGRI+SVGTTS R LET E+GII+ SG+T+IFI PG
Sbjct: 225 HSEFYTVTEEAAQAINTARESGGRIISVGTTSTRTLETVADENGIIHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++A+D +++NFHLP+STL+M++SAF G E Y+ AI + YRFYS+GD L+
Sbjct: 285 YKYKAIDGIITNFHLPESTLIMMISAFAGKENVMNAYKTAIDNKYRFYSFGDAMLI 340
>gi|146318286|ref|YP_001197998.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 05ZYH33]
gi|146320479|ref|YP_001200190.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 98HAH33]
gi|145689092|gb|ABP89598.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 05ZYH33]
gi|145691285|gb|ABP91790.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 98HAH33]
gi|292558081|gb|ADE31082.1| Queuosine biosynthesis protein [Streptococcus suis GZ1]
Length = 344
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 216/355 (60%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDFDLP IA P+ RDS++L+++ +V S DH++ L N DA
Sbjct: 3 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKRS-MVDSHFDHIIDQL----NPGDA 57
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + + L + W V A+P+K +K G + F
Sbjct: 58 LVMNNTRVLPARLYGYKPETMGH----VELLLLKNTQGDQWEVLAKPAKRLKVGTTVAF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL AT++++ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 113 ---GDGRLTATIVEELEHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK----LEDRE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 165 RYQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 225 EMHSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLQADSGWTNIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD
Sbjct: 285 KPGYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGD 339
>gi|253751451|ref|YP_003024592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis SC84]
gi|253753352|ref|YP_003026493.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis P1/7]
gi|253755819|ref|YP_003028959.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis BM407]
gi|251815740|emb|CAZ51341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis SC84]
gi|251818283|emb|CAZ56092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis BM407]
gi|251819598|emb|CAR45300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis P1/7]
gi|319757868|gb|ADV69810.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis JS14]
Length = 342
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 216/355 (60%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDFDLP IA P+ RDS++L+++ +V S DH++ L N DA
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKRS-MVDSHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGYKPETMGH----VELLLLKNTQGDQWEVLAKPAKRLKVGTTVAF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL AT++++ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 ---GDGRLTATIVEELEHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK----LEDRE 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 163 RYQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLQADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD
Sbjct: 283 KPGYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGD 337
>gi|302023597|ref|ZP_07248808.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis 05HAS68]
Length = 342
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 215/355 (60%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDFDLP IA P+ RDS++L+++ +V S DH++ L N DA
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKQS-MVDSHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + + L N W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGYKPETMGH----VELLLLKNTQGNQWEVLAKPAKRLKVGTTVAF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL AT++++ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 ---GDGRLTATIVEELEHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK----LEDRE 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 163 RYQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A AQ LN VK GRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYNLSAEAAQTLNQVKDSSGRIVAVGTTSIRTLETIGNKFDGRLEADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD
Sbjct: 283 KPGYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGD 337
>gi|323485700|ref|ZP_08091037.1| hypothetical protein HMPREF9474_02788 [Clostridium symbiosum
WAL-14163]
gi|323400963|gb|EGA93324.1| hypothetical protein HMPREF9474_02788 [Clostridium symbiosum
WAL-14163]
Length = 347
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 217/359 (60%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RL+V++ + I + D+ ++L D +V
Sbjct: 1 MDVKDFYYDLPEELIAQDPLEDRSSSRLLVLNKDTG---EIQHKVFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G +++F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRRENDIWETLVKPGKKAKIGTVINF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLKGTVVDVVEEGNRLIQFSYKGI-FEEILDELGQMPLPPYITHQ----LQDKKRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ GI++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLGKIAEKGIEIAHVTLHVGLGTFRPVKVDNVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K +GGR++ VGTTS R LE+A EDGI+ SG+T+IFI PG
Sbjct: 225 HSEFYIVEEEEARKINDTKKKGGRVICVGTTSCRTLESAAGEDGILKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D L++NFHLP+STL+MLVSA G E K Y+ AI YRF+S+GD + K
Sbjct: 285 YRFKILDCLITNFHLPESTLVMLVSALAGREHVLKAYEEAIKERYRFFSFGDAMFIASK 343
>gi|160935784|ref|ZP_02083159.1| hypothetical protein CLOBOL_00674 [Clostridium bolteae ATCC
BAA-613]
gi|158441528|gb|EDP19238.1| hypothetical protein CLOBOL_00674 [Clostridium bolteae ATCC
BAA-613]
Length = 349
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 212/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD++LP IA P+ R ++RLMV+ I + D+ +L D +V
Sbjct: 1 MDVKDFDYELPEELIAQDPLEDRSASRLMVLDRETG---EIQHRIFKDITEYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ +I L R + W RP K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----KDTGAKIEILLLKRRENDVWETLVRPGKKAKPGTVIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV+D + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLTGTVVDTVDDGNRLIQFHYKGI-FEEILDQLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL+ + +G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYARHEGSAAAPTAGLHFTQELLAEIEGMGVKIAHVTLHVGLGTFRPVKVENVQDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N ++ GGR++ VGTTS R +E+A+TEDG++ +G+T IFI PG
Sbjct: 225 HSEFYIVEESEAKKVNDTRAAGGRVICVGTTSCRTVESASTEDGVLKAGTGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YRFKVLDALITNFHLPQSTLVMLVSALAGREHILDAYREAVKEGYRFFSFGDAMFI 340
>gi|294795131|ref|ZP_06760265.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 3_1_44]
gi|294453923|gb|EFG22298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 3_1_44]
Length = 341
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 212/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + +S + H DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLD-KVSGEVKHKGHFY-DLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G H ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYG----HRQGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK N G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGVIIDKTNFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVPQDTANRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|289434811|ref|YP_003464683.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289171055|emb|CBH27597.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 342
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 219/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATGE---IKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEQQYRFFSFGD 337
>gi|323706517|ref|ZP_08118076.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323534147|gb|EGB23939.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 341
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 217/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF +DLP IA P+ RD +RLMV++ + I + ++ +L ND +V
Sbjct: 1 MNLHEFYYDLPEELIAQEPLQNRDESRLMVLNKDTGE---IKHDIFKNILTYLKPNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GVR +I L R+ + W + +P + K G F
Sbjct: 58 LNDTKVIPARLYGVR----EDTGGKIEFVLLKRLGIDEWEILVKPGRRAKIGSKFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ + G ++ FS G+ E + +G +P+PPYI +K +D Y
Sbjct: 111 -GNGELKALILSDTDAGGRIVRFSYEGV-FEEVLDKLGEMPIPPYIKKK----LKDKNMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLDKIREFGVKTVFITLHVGLGTFRPVKEEVIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A A+N+ + GGRI+SVGTTS R LET +DGII+ SG+T+IFI PG
Sbjct: 225 HSEFYIVNEDAADAINAARKAGGRIISVGTTSTRTLETVADDDGIIHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++A+D +++NFHLP+STL+M++SAF G E Y+ AI + YRFYS+GD L+
Sbjct: 285 YKYKAIDGIITNFHLPESTLIMMISAFAGKENVMNAYKTAIENKYRFYSFGDAMLI 340
>gi|323695094|ref|ZP_08109236.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
symbiosum WAL-14673]
gi|323500849|gb|EGB16769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
symbiosum WAL-14673]
Length = 347
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 217/359 (60%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RL+V++ + I + D+ ++L D +V
Sbjct: 1 MDVKDFYYDLPEELIAQDPLEDRSSSRLLVLNKDTG---EIQHKVFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G +++F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRRENDIWETLVKPGKKAKIGTVINF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLKGTVVDVVEEGNRLIQFSYKGI-FEEILDELGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ GI++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLGKIAEKGIEIAHVTLHVGLGTFRPVKVDNVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K +GGR++ VGTTS R LE+A EDGI+ SG+T+IFI PG
Sbjct: 225 HSEFYIVEEEEARKINDTKKKGGRVICVGTTSCRTLESAAGEDGILKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D L++NFHLP+STL+MLVSA G E K Y+ AI YRF+S+GD + K
Sbjct: 285 YRFKILDCLITNFHLPESTLVMLVSALAGREHVLKAYEEAIKERYRFFSFGDAMFIASK 343
>gi|313894608|ref|ZP_07828171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. oral taxon 158 str. F0412]
gi|313440798|gb|EFR59227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. oral taxon 158 str. F0412]
Length = 341
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + ++ +V +H DL L+ D +V
Sbjct: 1 MKVIDFDYELPEELIAQHPVEPRDTARLLTLD-KVTGEVVHKEHFY-DLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G H ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYG----HRQGSGGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL TVIDK G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGTVIDKTEFGGRIIEFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT ++GI+ SG T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKQKGSRIIAVGTTSVRTLESATNDEGILQGISGTTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVKERYRFFSFGDAMFI 340
>gi|294793309|ref|ZP_06758454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 6_1_27]
gi|294455740|gb|EFG24105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 6_1_27]
Length = 341
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 212/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + +S + H DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLD-KVSGEVKHKGHFY-DLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G H ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYG----HRQGSGGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK + G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGVIIDKTDFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|313633141|gb|EFS00030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri FSL N1-067]
Length = 342
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 218/353 (61%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATGE---IKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGTK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGELVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEQQYRFFSFGD 337
>gi|114797801|ref|YP_761436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hyphomonas
neptunium ATCC 15444]
gi|123322972|sp|Q0BYK7|QUEA_HYPNA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114737975|gb|ABI76100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hyphomonas
neptunium ATCC 15444]
Length = 351
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 211/359 (58%), Gaps = 11/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP IALRP P+D+ARL+VVH + + D V DLP +LN+ D +V
Sbjct: 1 MDLSVFQFDLPEDLIALRPAQPQDAARLLVVHGDGR----LIDATVRDLPKYLNTGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHIN-RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
FN+T+V+ A L GVR R+ E+ L R W ARP + +K GD + FF+
Sbjct: 57 FNDTRVLPAALKGVRPARDGASRDVEVDVNLVERQGDCLWLALARPGRRLKDGDEI-FFA 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ +R + + GEILL F+ G + + G +PLPPYIAR+RP DA D
Sbjct: 116 EGFSAR----IASRREGGEILLDFNCEGEAMIAALDAHGAMPLPPYIARRRPADAEDRET 171
Query: 180 YQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A + SVAAPTAGLHFT LL+ + + G+K V LHVG GTF P++ ++
Sbjct: 172 YQTRFAGEDAASVAAPTAGLHFTPRLLAEVEAAGLKRETVRLHVGLGTFKPLEDRHLSEN 231
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+H E I A LN+ ++ G R+V VGTT++R LE+ EDG I+ +G T+IF+
Sbjct: 232 RLHEEWRRITPEVADRLNAARAAGARLVPVGTTAMRTLESCAGEDGQIHAATGPTDIFLK 291
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG RA D LM+NFHLP S+L MLVSA G + Y HAI YRFYSYGD LL
Sbjct: 292 PGDPVRATDALMTNFHLPGSSLFMLVSALMGTSLMRAAYAHAIEEKYRFYSYGDACLLL 350
>gi|116872960|ref|YP_849741.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|123461090|sp|A0AIY0|QUEA_LISW6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116741838|emb|CAK20962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 342
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 217/353 (61%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGE---IKDQHFTDILSYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGTK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGGTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GNGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A +N +K+ GG++V+VGTTS+R LET A+ +G + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEDAANRINKIKATGGKVVAVGTTSIRTLETIASHNEGKLVAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++N HLPKSTL+MLVSA Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNLHLPKSTLIMLVSALSNRTNILAAYNHAVEQQYRFFSFGD 337
>gi|134299522|ref|YP_001113018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfotomaculum reducens MI-1]
gi|172044286|sp|A4J540|QUEA_DESRM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134052222|gb|ABO50193.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfotomaculum reducens MI-1]
Length = 341
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 219/357 (61%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M + +FDF+LP IA P+ RD +RLM+VH ++ ++H DL +L D +
Sbjct: 1 MQLSDFDFELPEELIAQEPIKQRDQSRLMIVHRDIDR----TEHKTFKDLLQYLQPGDVL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N++KV+ A++ G + + I L ++S N W +P K K G+IL F
Sbjct: 57 VMNDSKVLPARIYGEKVSTGAK----IEVLLLRQISANQWETLVKPGKRAKIGEILDF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G +++ ++D + G ++ FS L+ + +G++PLPPYI K+P+ D
Sbjct: 111 --GSGKMKGKIVDHTDVGGRVIEFSCQEPFLQV-LEQIGSMPLPPYI--KKPLT--DKQR 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ +GS AAPTAGLHFT LL + + G+ + V LHVG GTF PV+VED H
Sbjct: 164 YQTVYARQEGSAAAPTAGLHFTRELLEEIRNRGVSIVTVLLHVGLGTFRPVQVEDVTSHR 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+ +N K RGGR+++VGTTS+R LET++ E G + P SGFT+IFI P
Sbjct: 224 MHEEYYEITPQAAEEINQAKLRGGRVIAVGTTSVRCLETSSNEAGQVLPGSGFTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ ++ L++NFHLPKS+LLML+SA G E+ K YQ A++ YRF+S+GD L+
Sbjct: 284 GYQFKVIEGLVTNFHLPKSSLLMLISALAGREKILKAYQQAVTEQYRFFSFGDAMLI 340
>gi|269797657|ref|YP_003311557.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Veillonella parvula DSM 2008]
gi|269094286|gb|ACZ24277.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Veillonella parvula DSM 2008]
Length = 341
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA P+ PRD+ARL+ + +S + +H DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPIEPRDTARLLTLD-KVSGKVSHKEHFY-DLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G H ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYG----HRQGSGGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL VIDK G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLRGIVIDKTEFGGRIIEFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQETADRINAAKRNGRRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVKERYRFFSFGDAMFI 340
>gi|325295633|ref|YP_004282147.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325066081|gb|ADY74088.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 343
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 214/358 (59%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA PV PRDS+RLMV++ N I + D+ +L + D +V
Sbjct: 1 MKVSDFDYKLPKELIAKFPVEPRDSSRLMVLNKNTGK---IEHRIFKDIVEYLKAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L F ++ K + L + N+W V A+P++ +KKG + F
Sbjct: 58 INDTKVIPARL----FGKLDTGGK-VEILLVRQPGLNTWEVMAKPARKLKKGRKISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
LEA V + G+ ++ F I S + +I +G IPLPPYI R+ + R+
Sbjct: 110 --DEELEAVVKEYSGEGKRIIEFVIKSNKDFMEKIEEIGHIPLPPYIEREEKPEDRE--K 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ +G+VAAPTAGLHFT+ LL L S GI + +TLHVG GTF PVKVE+ +DH
Sbjct: 166 YQTVFARKEGAVAAPTAGLHFTTELLENLKSKGIIIKNITLHVGPGTFKPVKVENVEDHQ 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
M E ++ TA +N K G R+++VGTT R LE+A E G + TN+FI P
Sbjct: 226 MDYETYYVPEDTAIEINRAKEEGRRVIAVGTTVTRTLESAADESGKVKQGEDSTNLFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ +D L++NFHLP+STLLMLVSAF G E Y+ A+ YRFYSYGD +F
Sbjct: 286 GYKFKVIDALITNFHLPRSTLLMLVSAFAGKERILNAYKEAVRKGYRFYSYGDAMFIF 343
>gi|146295225|ref|YP_001178996.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145408801|gb|ABP65805.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 345
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 213/358 (59%), Gaps = 24/358 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +P+ PRDS+RLMV+HP+ I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPEELIAQKPIEPRDSSRLMVIHPDGR----IDHRIFRDIIEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+S ++W V RP K +KG F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLSIDTWEVMTRPGKKARKGRRFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V+ + G ++ F G+ E + +G IPLPPYI K R Y
Sbjct: 113 GDGRLKAEVLHVNQDEGTRIVRFEYEGV-FEDILESLGEIPLPPYIKEKLENVER----Y 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT LLSR+ G++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKIPGSAAAPTAGLHFTEELLSRISKKGVQTLYVTLHVGLGTFKPVKVENIEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A+ +N K G R+++VGTTS R+LE+A E G++ G+T+IFI PG
Sbjct: 228 HEEYYEISEDVAERINEAKRLGKRVIAVGTTSCRVLESAAVEKGLVKAQKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ +
Sbjct: 288 YEFKILDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVEQRYRFFSFGDAMLILK 345
>gi|238019734|ref|ZP_04600160.1| hypothetical protein VEIDISOL_01609 [Veillonella dispar ATCC 17748]
gi|237863775|gb|EEP65065.1| hypothetical protein VEIDISOL_01609 [Veillonella dispar ATCC 17748]
Length = 341
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + ++ + +H DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLD-KVTGEVAHKEHFY-DLLDELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQR----QGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL TVIDK G ++ F+ G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGTVIDKTEFGGRIIEFTCDGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKRNGRRIIAVGTTSVRTLESATNDDGVLQGISGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|282850102|ref|ZP_06259484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
parvula ATCC 17745]
gi|282580291|gb|EFB85692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
parvula ATCC 17745]
Length = 341
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + +S + H DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLD-KVSGEVKHKGHFY-DLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G H ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYG----HRQGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK N G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGVIIDKTNFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVPQDTANRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALASREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|297544495|ref|YP_003676797.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842270|gb|ADH60786.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 341
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 209/359 (58%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ I + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPKELIAQEPLEDRSSSRLMVLNKKTGE---IEHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L I RRE +I L R+S N W +P + K G F
Sbjct: 58 LNDTKVIPARL-------IGRREDSGGKIEFVLIKRISSNEWETLVKPGRRAKIGSRFVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A V+D G ++ F G+ E + +G +P+PPYI +K R
Sbjct: 111 ----GTGELIAEVLDATEAGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKKLKNKDR-- 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E+ ++
Sbjct: 164 --YQTVYAKYEGSAAAPTAGLHFTKELLEKIKQMGVKTVFITLHVGLGTFRPVKEEEIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A +N + GGRI++VGTTS R LET E+G + SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAANEINETRKSGGRIIAVGTTSTRTLETVADENGYVKEKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI H YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGRENIMRAYQVAIEHKYRFFSFGDAMLI 340
>gi|289578214|ref|YP_003476841.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter italicus Ab9]
gi|289527927|gb|ADD02279.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter italicus Ab9]
Length = 341
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 209/359 (58%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ I + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPKELIAQEPLEDRSSSRLMVLNKKTGE---IEHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L I RRE +I L R+S N W +P + K G F
Sbjct: 58 LNDTKVIPARL-------IGRREDSGGKIEFVLIKRISSNEWETLVKPGRRAKIGSRFVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A V+D G ++ F G+ E + +G +P+PPYI +K R
Sbjct: 111 ----GTGELIAEVLDTTEAGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKKLKNKDR-- 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E+ ++
Sbjct: 164 --YQTVYAKYEGSAAAPTAGLHFTKELLEKIKQMGVKTVFITLHVGLGTFRPVKEEEIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A +N + GGRI++VGTTS R LET E+G + SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAANEINETRKSGGRIIAVGTTSTRTLETVADENGYVKEKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI H YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGRENIMRAYQVAIEHKYRFFSFGDAMLI 340
>gi|55820620|ref|YP_139062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMG 18311]
gi|81560864|sp|Q5M5E8|QUEA_STRT2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|55736605|gb|AAV60247.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMG 18311]
Length = 347
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 221/355 (62%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RD+++L+V+ P ++ + + DH++ L N DA
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDP-VTREMTDTHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV ++ + G ++ FS +GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 ---GDGRLTATVTEELDHGGRIVEFSYNGIFLEVLESL-GEMPLPPYIHEK--LEDRDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYTLSQEAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E + Y+HAI YRF+S+GD
Sbjct: 283 KPGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAIQERYRFFSFGD 337
>gi|322517220|ref|ZP_08070102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis ATCC 49124]
gi|322124207|gb|EFX95731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis ATCC 49124]
Length = 347
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/362 (45%), Positives = 222/362 (61%), Gaps = 21/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RD+++L+V+ P ++ + + DH++ L N DA
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDP-VTKEMTDTHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + N + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----NDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV ++ + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 ---GDGRLTATVTEELDHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL + + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTPELLQNIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + +G + SG+TNIFI
Sbjct: 223 EMHSEFYTLSQEAADTLNSVKATGGRIVAVGTTSIRTLETIGNKYNGRLQADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD +
Sbjct: 283 KPGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGDAMFVT 342
Query: 358 QK 359
Q+
Sbjct: 343 QR 344
>gi|322372469|ref|ZP_08047005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C150]
gi|321277511|gb|EFX54580.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C150]
Length = 347
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/355 (46%), Positives = 219/355 (61%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RD+++L+V+ P ++ + + DH++ L N DA
Sbjct: 1 MNTNDFDFELPEELIAQTPLKQRDASKLLVIDP-VTKEMTDTHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----PDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV ++ + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 ---GDGRLTATVTEELDHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ S G+K+ ++TLHVG GTF PV VE+ D+H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTPELLQKIESKGVKLVYLTLHVGLGTFRPVSVENVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYTLSQDAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD
Sbjct: 283 KPGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGD 337
>gi|325697145|gb|EGD39032.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK160]
Length = 342
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 212/353 (60%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ + G ++ F+ GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVVDELDHGGRIVRFAYEGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|328957017|ref|YP_004374403.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. 17-4]
gi|328673341|gb|AEB29387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. 17-4]
Length = 345
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 213/353 (60%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ K+FDFDLP IA P+ R S++L++++ + D +D+ LN DA+V
Sbjct: 4 LTTKDFDFDLPEELIAQTPLENRSSSKLLILNKETGE---VDDKHFTDILEELNEGDALV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+GV+ + L + W +P+K G ++ F
Sbjct: 61 MNDTRVLPARLHGVK----PETGAHLEILLLKNTEKDQWETLVKPAKKATVGTVISF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ N G ++ FS GI LE SL G +PLPPYI + R Y
Sbjct: 114 -GDGRLTATVTEELNHGGRIIDFSYDGIFLEVLESL-GEMPLPPYIKERLEDSER----Y 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ S G+K+ F+TLHVG GTF PV V+ +DH M
Sbjct: 168 QTVYAKENGSAAAPTAGLHFTEELLEKIKSKGVKLIFLTLHVGLGTFRPVSVDSIEDHEM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A L +V++ GGRIV+VGTTS+R LET T+ +G I SG+T+IFI+P
Sbjct: 228 HSEFYRLTEESATELTAVRNNGGRIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFISP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+ VD +NFHLPKSTL+MLVSAF G E YQHA+ YRF+S+GD
Sbjct: 288 GYTFKVVDAFSTNFHLPKSTLVMLVSAFAGREHVLAAYQHAVDEKYRFFSFGD 340
>gi|327458690|gb|EGF05038.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1057]
Length = 342
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 211/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ FS GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFSYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK++GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKAKGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|322412116|gb|EFY03024.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 342
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 214/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDFDLP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHEQKTMIDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEKL----DTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL AT++++ G ++ F+ GI LE SL G +PLPPYI K R
Sbjct: 111 --GDGRLTATIVEELEHGGRIVEFNYEGIFLEVLESL-GEMPLPPYIHEKLDDAER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LLS++ + G+ + ++TLHVG GTF PV VE+ DDH
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLSKIEAKGVHLVYLTLHVGLGTFRPVSVENLDDHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGRIV+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRIVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGD 337
>gi|167748863|ref|ZP_02420990.1| hypothetical protein ANACAC_03637 [Anaerostipes caccae DSM 14662]
gi|167651833|gb|EDR95962.1| hypothetical protein ANACAC_03637 [Anaerostipes caccae DSM 14662]
Length = 357
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 204/361 (56%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ I ++ +L D +V
Sbjct: 17 MKTSDFTFDLPEELIAQDPLTDRSSSRLLVLDKETGE---IRHEGFRNIAGYLKRGDCLV 73
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+TKVI A+L G EKE I L R N+W +P + K G +
Sbjct: 74 LNDTKVIPARLIG---------EKEGTGAKIEVLLLKRKQDNTWETLVKPGRKAKPGTRI 124
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F GQ +L V D + G L+ F GI E + +G +PLPPYI + +
Sbjct: 125 SF----GQGKLVGEVTDIVDEGNRLVKFEFDGI-FEEVLDELGQMPLPPYITHQ----LK 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK +GS AAPTAGLHFT LL + GI++ +VTLHVG GTF PVKVED
Sbjct: 176 DKNRYQTVYAKHEGSAAAPTAGLHFTKELLKEIEEKGIRLAYVTLHVGLGTFRPVKVEDV 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE +D A+ +N + GGRI+SVGTTS R LE+A E+G I P SG+T I
Sbjct: 236 TEHHMHSEFYVVDEEAAEKINKTRKEGGRIISVGTTSTRTLESAADENGFIEPKSGWTEI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ +D L++NFHLP+STLLMLVSA G E K Y A+ YRF+S+GD
Sbjct: 296 FIYPGYKFKVIDGLITNFHLPESTLLMLVSALAGKEHILKAYDEAVKERYRFFSFGDAMF 355
Query: 356 L 356
+
Sbjct: 356 I 356
>gi|317470297|ref|ZP_07929690.1| tRNA ribosyltransferase-isomerase [Anaerostipes sp. 3_2_56FAA]
gi|316902205|gb|EFV24126.1| tRNA ribosyltransferase-isomerase [Anaerostipes sp. 3_2_56FAA]
Length = 341
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 203/357 (56%), Gaps = 26/357 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ I ++ +L D +V
Sbjct: 1 MKTSDFTFDLPEELIAQDPLTDRSSSRLLVLDKETGE---IRHEGFRNIAGYLKRGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+TKVI A+L G EKE I L R N+W +P + K G +
Sbjct: 58 LNDTKVIPARLIG---------EKEGTGAKIEVLLLKRKQDNTWETLVKPGRKAKPGTRI 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F GQ +L V D + G L+ F GI E + +G +PLPPYI + +
Sbjct: 109 SF----GQGKLVGEVTDIVDEGNRLVKFEFDGI-FEEVLDELGQMPLPPYITHQ----LK 159
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK +GS AAPTAGLHFT LL + GI++ +VTLHVG GTF PVKVED
Sbjct: 160 DKNRYQTVYAKHEGSAAAPTAGLHFTKELLKEIEEKGIRLAYVTLHVGLGTFRPVKVEDV 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE +D A+ +N + GGRI+SVGTTS R LE+A E+G I P SG+T I
Sbjct: 220 TEHHMHSEFYVVDEEAAEKINKTRKEGGRIISVGTTSTRTLESAADENGFIEPKSGWTEI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
FI PGY+F+ +D L++NFHLP+STLLMLVSA G E K Y A+ YRF+S+GD
Sbjct: 280 FIYPGYKFKVIDGLITNFHLPESTLLMLVSALAGKEHILKAYDEAVKERYRFFSFGD 336
>gi|312863897|ref|ZP_07724135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis F0396]
gi|311101433|gb|EFQ59638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis F0396]
Length = 347
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 220/355 (61%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RD+++L+V+ P ++ + + DH++ L N DA
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDP-VTKEMTDTHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + N + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----NDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV ++ + G ++ FS +GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 ---GDGRLTATVTEELDHGGRIVEFSYNGIFLEVLESL-GEMPLPPYIHEK--LEDRDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL + + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTPELLQNIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + +G + SG+TNIFI
Sbjct: 223 EMHSEFYTLSQEAADTLNSVKATGGRIVAVGTTSIRTLETIGNKYNGRLQAESGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD
Sbjct: 283 KPGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGD 337
>gi|320546395|ref|ZP_08040710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equinus ATCC 9812]
gi|320448780|gb|EFW89508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equinus ATCC 9812]
Length = 342
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 220/355 (61%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RDS++L+V+ N + +V + DH++ +L N DA
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDRN-THEMVDAHFDHILDEL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----PETHGHVELLLLKNTEGDKWEVLAKPAKRLRVGTKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K +D D
Sbjct: 111 ---GDGRLTATVVEELDNGGRIVEFDYGGIFLEVLESL-GEMPLPPYIHEK--LDDPDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ +VTLHVG GTF PV V++ ++H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTKELLEKIEAKGVKLVYVTLHVGLGTFRPVSVDNVEEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + AQ L VK+ GGRIV+VGTTS+R LET ++ +G I SG+TNIFI
Sbjct: 223 EMHSEFYRLSEEAAQTLRDVKATGGRIVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD
Sbjct: 283 KPGYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDERYRFFSFGD 337
>gi|182418567|ref|ZP_02949847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum 5521]
gi|237667777|ref|ZP_04527761.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182377570|gb|EDT75121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum 5521]
gi|237656125|gb|EEP53681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 341
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 209/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ I + D+ +LN+ D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKKTGE---IEHKVFHDIVDYLNAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L RV + W A+P K + G F
Sbjct: 58 LNNTRVMPARLIGEK----EETGGKIEFLLLKRVEKDRWECLAKPGKSARVGRKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V++ G ++ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGKLKAEVVEVKENGNRIVEFHYEGI-FEEVLDSLGEMPLPPYIHER----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ GI V ++TLHVG GTF PVKVE+ ++H M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTNQLLEQIKEKGINVVYLTLHVGLGTFRPVKVENLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A +N K GGR++SVGTTS R LET E+G++ SG+TNIFI PG
Sbjct: 225 HSEFYMLSKESADIINETKRNGGRVISVGTTSTRTLETIGDENGLVKEQSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKVVDNLITNFHLPESTLIMLVSTLAGKEHVMNAYKTAVEEKYRFFSFGDAMFI 340
>gi|125973476|ref|YP_001037386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
thermocellum ATCC 27405]
gi|256005374|ref|ZP_05430339.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 2360]
gi|281417678|ref|ZP_06248698.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum JW20]
gi|166216717|sp|A3DE14|QUEA_CLOTH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|125713701|gb|ABN52193.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Clostridium thermocellum ATCC 27405]
gi|255990693|gb|EEU00810.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 2360]
gi|281409080|gb|EFB39338.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum JW20]
gi|316940286|gb|ADU74320.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 1313]
Length = 341
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/361 (44%), Positives = 212/361 (58%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F +DLP IA PV RD +RLMV+ IS D+ ++N D +V
Sbjct: 1 MKVSDFYYDLPQELIAQEPVEKRDMSRLMVLDKETGK---ISHKRFKDIVEYINKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+VI A+L G EKE I L R++ + W V +P K K G
Sbjct: 58 LNDTRVIPARLLG---------EKEGTGGKIEFVLLKRINGDVWEVILKPGKKAKPGARF 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G L+A VI+ G L+ F GI E + +G +PLPPYI +K +D
Sbjct: 109 VF----GNGELKAEVIEIVEEGNRLVRFEYDGI-FEEILDRIGIVPLPPYITKK--LD-- 159
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ +GS AAPTAGLHFT LL L G+K+ +VTLHVG GTF PVKVE+
Sbjct: 160 DAERYQTVYSRYKGSAAAPTAGLHFTLELLEELAGRGVKIAYVTLHVGLGTFRPVKVENL 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
++H MHSE I +NS K GG+I++VGTTS R+LET E+GI+ P SG+T+I
Sbjct: 220 EEHKMHSEFYRIKEEDCDKINSTKQNGGKIIAVGTTSCRVLETVGDENGIVRPQSGWTDI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ VD L++NFHLP+STL+MLVSA G E+ + Y A+ YRF+S+GD
Sbjct: 280 FIYPGYKFKVVDSLITNFHLPESTLIMLVSALAGREKILEAYNIAVKERYRFFSFGDAMF 339
Query: 356 L 356
+
Sbjct: 340 I 340
>gi|125717594|ref|YP_001034727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK36]
gi|166218750|sp|A3CLX2|QUEA_STRSV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|125497511|gb|ABN44177.1| S-adenosylmethio nine:tRNA-ribosyltransferase-isomerase (queuine
synthetase), putative [Streptococcus sanguinis SK36]
Length = 342
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ FS GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFSYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYNWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|313637715|gb|EFS03084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri FSL S4-171]
Length = 342
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 216/353 (61%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATGE---IKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGTK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGELVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLV + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVXXLSDRNKILTAYNHAVEQQYRFFSFGD 337
>gi|325690109|gb|EGD32113.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK115]
Length = 343
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 2 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 59 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 112 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 226 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T K Y+HAI+ YRF+S+GD
Sbjct: 286 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLKAYEHAIAERYRFFSFGD 338
>gi|116627427|ref|YP_820046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMD-9]
gi|122267975|sp|Q03LS2|QUEA_STRTD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116100704|gb|ABJ65850.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus thermophilus LMD-9]
gi|312277945|gb|ADQ62602.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (Queuine
synthetase) [Streptococcus thermophilus ND03]
Length = 347
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RD+++L+V+ P DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVTREMTDTHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV + + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLTATVTKELDHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 224 MHSEFYTLSQEAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAVQERYRFFSFGD 337
>gi|24379107|ref|NP_721062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mutans UA159]
gi|46577053|sp|Q8DV72|QUEA_STRMU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|24377009|gb|AAN58368.1|AE014907_5 putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans UA159]
Length = 342
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 221/354 (62%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP + IA P+ RDS++L+VV H + DH++ +L NS DA+
Sbjct: 1 MNTSDFDFNLPEALIAQTPLKKRDSSKLLVVDHQKKTMKDTHFDHIIDEL----NSGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 57 VMNDTRVLPARLHGEKTV----THGHVELLLLKNIQGDQWEVLAKPAKRLKVGSHISF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+A + ++ + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLKAIIKEELDHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LLS++ + G+K+ ++TLHVG GTF PV V++ ++H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTEELLSKIEAKGVKLVYLTLHVGLGTFRPVSVDNVEEHQ 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ GGRIV+VGTTS+R LET + G I SG+TNIFI
Sbjct: 224 MHSEFYSLSPEAAQTLKDVKANGGRIVAVGTTSIRTLETIGNKFAGQIEADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKIVDAFSTNFHLPKSTLVMLVSAFAGRDFILDAYKHAVDKHYRFFSFGD 337
>gi|94994643|ref|YP_602741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10750]
gi|166218748|sp|Q1J5Y6|QUEA_STRPF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|94548151|gb|ABF38197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10750]
Length = 342
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 217/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+AT+ID+ G ++ FS GI LE SL G +PLPPYI K +D
Sbjct: 111 --GDGRLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LKDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|260887834|ref|ZP_05899097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|330838599|ref|YP_004413179.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|260862440|gb|EEX76940.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|329746363|gb|AEB99719.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
Length = 343
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 215/362 (59%), Gaps = 23/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++K+FD++LP RIA +P+ PR+++RLMV+ P I DL FL DA++
Sbjct: 1 MLLKDFDYELPEERIAQKPIEPRNASRLMVLDP---VAKTIEHRHFYDLGEFLAPGDALI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE---KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+T+V+ A+L G RRE I L R+ +SW RP K + G ++ F
Sbjct: 58 LNDTRVLPARLYG-------RREPTGAHIEVFLLRRLDKDSWETLVRPGKKAQVGQVIRF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ L A V+ + G ++ F G+ E + +G PLPPYI + D
Sbjct: 111 SDE-----LCAEVMAHTDFGGRIVKFRYEGV-FEEILDRLGETPLPPYIHER----LEDK 160
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y + +GS AAPTAGLHFT L+ L + G+ + FVTLHVG GTF PV VE ++
Sbjct: 161 ERYQTVYCREEGSAAAPTAGLHFTREQLAELKAQGVHIGFVTLHVGLGTFRPVNVEKIEE 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE + TA+ + K+ GGR+++VGTTS+R LE+A G+I+ SG+T+IFI
Sbjct: 221 HKMHSEYYQLPEETAELIRRTKAAGGRVIAVGTTSIRTLESAAEAQGVISAKSGWTDIFI 280
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF+ VD L++NFHLPKSTLLML+SAF G E Y+ A+ YRF+S+GD L
Sbjct: 281 YPGYRFKIVDALVTNFHLPKSTLLMLISAFAGREFVLHAYEEAVREKYRFFSFGDAMFLR 340
Query: 358 QK 359
++
Sbjct: 341 KR 342
>gi|294501379|ref|YP_003565079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium QM B1551]
gi|295706726|ref|YP_003599801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium DSM 319]
gi|294351316|gb|ADE71645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium QM B1551]
gi|294804385|gb|ADF41451.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium DSM 319]
Length = 342
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 214/358 (59%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ RD++RLMV++ + H+ DL ++ D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLEQRDASRLMVLNKETGS---VKHHMFHDLLDYVQEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNDTRVLPARLFGTK----EDTGANIEVLLLKQTQGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + + G LL F+ GI E + +G +PLPPYI K +D D Y
Sbjct: 111 -GDGRLTAVCKETSDQGGRLLEFNYEGIFYEV-LEQLGEMPLPPYI--KERLD--DQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ QGS AAPTAGLHFT +L +L G+ + F+TLHVG GTF PV V+D ++H M
Sbjct: 165 QTVFAREQGSAAAPTAGLHFTEEMLEQLKEKGVHIAFLTLHVGLGTFRPVSVDDLEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + TA LNSV+ +GGRI+SVGTTS R LET TE +G SG+TNIFI P
Sbjct: 225 HSEFYQVSEGTAALLNSVREKGGRIISVGTTSTRTLETIATEHNGKFVASSGWTNIFIFP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKSTL+MLVSA G E Y+ A++ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSTLIMLVSALAGRENVISAYEQAVAEKYRFFSFGDAMLIL 342
>gi|327473324|gb|EGF18744.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK408]
Length = 342
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 212/354 (59%), Gaps = 17/354 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNIQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQISAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK++GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQILRQVKAKGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDA 338
>gi|55822510|ref|YP_140951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus CNRZ1066]
gi|81559694|sp|Q5M0W1|QUEA_STRT1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|55738495|gb|AAV62136.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus CNRZ1066]
Length = 347
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RD+++L+V+ P DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLKQRDASKLLVIDPVTREMTDTHFDHIIDQL----NPRDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV ++ + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GYGRLTATVTEELDHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNIDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 224 MHSEFYTLSQEAADTLNSVKTAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAVQERYRFFSFGD 337
>gi|291522418|emb|CBK80711.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Coprococcus catus GD/7]
Length = 341
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/356 (44%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLMV+ IS H+ D+ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSSSRLMVLDRESG---EISHHIFKDIIDYLNPEDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ I L R + W RP K K G L F
Sbjct: 58 INDTKVIPARLYGVK----EDTGAHIEILLLKRRENDVWETLVRPGKKAKPGTRLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A VID G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGRLKAEVIDVVEEGNRLIHFEYEGI-FEEILDQLGEMPLPPYITHK----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ + + GI++ VTLHVG GTF PVKVED H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTPELLAAIEAKGIRIARVTLHVGLGTFRPVKVEDVTQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K RGGR+++VGTTS R LE+ EDG ++ G+T IFI PG
Sbjct: 225 HSEYYQVTQEAADIINDTKKRGGRVIAVGTTSTRTLESVADEDGTMHAAGGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKCIDALITNFHLPESTLLMLVSALAGKEHIMHAYETAVQERYRFFSFGDAMFI 340
>gi|50914461|ref|YP_060433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10394]
gi|68053076|sp|Q5XBG3|QUEA_STRP6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|50903535|gb|AAT87250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10394]
Length = 342
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGRLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAIDEKYRFFSFGD 337
>gi|85705247|ref|ZP_01036346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. 217]
gi|85670120|gb|EAQ24982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. 217]
Length = 362
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/358 (44%), Positives = 221/358 (61%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL+V I+D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRRAARLLVAEGA-----AITDAGVADLGRWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R + + +I TL + +W +P K + G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRSGAQGDTAAKIEVTLLEPGAEGTWGALIKPLKKVSVGEEIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A V++ G+ L F++ + + ++ G +PLPPYIA +RP D +D V
Sbjct: 115 ----SERLSA-VLEAKEEGQGRLRFNLRAEDFDAALAEAGAMPLPPYIAARRPADDQDKV 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L ++G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARAPGAVAAPTASLHFDEALLAELAAMGVGFTHVTLHVGAGTFLPVKVEDVTSH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + ++ GGRI+ VGTT+LRL+ETA G I WSG T+IFI
Sbjct: 230 KMHAEWGEVSEEAAAEIAATRAAGGRIIPVGTTALRLIETAARATGEIAAWSGDTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D LM+NFHLPKSTL+MLVSA G ++Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVTDALMTNFHLPKSTLMMLVSALMGQGVIDRIYAHAVARGYRFFSYGDASLL 347
>gi|325694040|gb|EGD35958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK150]
Length = 342
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIADKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|239624077|ref|ZP_04667108.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522108|gb|EEQ61974.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 358
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + + D+ +L D +V
Sbjct: 10 MDVKDFYFDLPEELIAQDPLKDRSSSRLLVLDKDTG---EVQHRVFRDIVEYLRPGDCLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ +I L R + W RP K + G ++ F
Sbjct: 67 INDTKVIPARLFGVK----KDTGAKIEVLLLKRRENDIWETLVRPGKKCRPGTVIEF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV++ + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 120 -GEGLLSGTVVETVDDGNRLIRFSYKGI-FEEILDQLGQMPLPPYITH----ELKDKNRY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ +G+++ VTLHVG GTF PVKVE+ DH M
Sbjct: 174 QTVYAKHEGSAAAPTAGLHFTNELLKQIEDMGVRIAHVTLHVGLGTFRPVKVENVLDHHM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GGR++ VGTTS R +E+A+T+DGI+ +G+T IFI PG
Sbjct: 234 HSEFYVVEESEAKKVNDTKAAGGRVICVGTTSCRTVESASTDDGILQAKTGWTEIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 294 YRFKVLDALITNFHLPESTLVMLVSALAGREHILDAYKEAVRERYRFFSFGDAMFI 349
>gi|323127653|gb|ADX24950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 342
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 214/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDFDLP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHEQKTMIDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL AT++++ G ++ F+ GI LE SL G +PLPPYI K R
Sbjct: 111 --GDGRLTATIVEELEHGGRIVEFNYEGIFLEVLESL-GEMPLPPYIHEKLDDAER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT+NLLS++ + G+ + ++TLHVG GTF PV V++ DDH
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTNLLSKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDDHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKKAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGD 337
>gi|328945507|gb|EGG39658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1087]
Length = 342
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 211/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F+ GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFAYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|188589166|ref|YP_001920353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E3 str. Alaska E43]
gi|251778245|ref|ZP_04821165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|238689663|sp|B2V339|QUEA_CLOBA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188499447|gb|ACD52583.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E3 str. Alaska E43]
gi|243082560|gb|EES48450.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 341
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 205/361 (56%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ IS D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKETGE---ISHKNFYDIIDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNT+V+ A+L G EKE I L RV + W A+P K + G
Sbjct: 58 LNNTRVMPARLIG---------EKEGTGGKIEFLLLKRVDKDRWECLAKPGKSARVGRRF 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G +L+A V++ G ++ F GI E + +G +PLPPYI +
Sbjct: 109 TF----GDGKLKAEVVEVKENGNRIVEFYYEGI-FEEVLDSLGEMPLPPYIHER----LE 159
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+K GS AAPTAGLHFT LL ++ GI + +VTLHVG GTF PVKVE
Sbjct: 160 DRERYQTVYSKENGSAAAPTAGLHFTEELLHKIKEKGINIAYVTLHVGLGTFRPVKVETI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+DH MHSE + A+ +N K RG R++SVGTTS R LET EDG + SG+TNI
Sbjct: 220 EDHEMHSEYYHLSKEDAEVINETKKRGNRVISVGTTSTRTLETIADEDGNVKETSGWTNI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD
Sbjct: 280 FIYPGYKFKVVDRLITNFHLPESTLIMLVSTLAGKEHVMNAYEEAVKERYRFFSFGDAMF 339
Query: 356 L 356
+
Sbjct: 340 I 340
>gi|20807638|ref|NP_622809.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Thermoanaerobacter tengcongensis MB4]
gi|22096013|sp|Q8RAN0|QUEA_THETN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|20516181|gb|AAM24413.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Thermoanaerobacter tengcongensis MB4]
Length = 341
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF FDLP IA P+ R S+RLM++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFDLPEELIAQEPLEDRASSRLMILDRRTGE---IKHDIFKNITKYLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R ++ L R S N W V +P K K G + F
Sbjct: 58 LNDTKVIPARLIGQR----EDSGGKVELLLLRRTSMNEWEVLVKPGKRAKVGKRVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A +ID G + F G+ E + +G +P+PPYI +K +D Y
Sbjct: 111 -GNGELVAEIIDTTEAGGRIARFYYDGV-FEEVLDRLGEMPVPPYIKKK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + ++G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLDEIRNMGVKTVFITLHVGLGTFRPVKEEIIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+A+N + GGRI++VGTTS R LET E G I+P SG+T+IFI PG
Sbjct: 225 HEEFYIVTEEAAKAINEARKNGGRIIAVGTTSTRTLETVADESGYIHPKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ AI + YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKVAIENKYRFFSFGDAMLI 340
>gi|288555345|ref|YP_003427280.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudofirmus OF4]
gi|288546505|gb|ADC50388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudofirmus OF4]
Length = 341
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 215/352 (61%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RL+V+ + I D + S + +L S D +V
Sbjct: 1 MDVRDFDFYLPDELIAQTPLLDRTASRLLVLDKDNGA---IKDDVFSSITDYLKSGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ +I L ++ + W A+P+K +KKG + F
Sbjct: 58 LNDTRVLPARLYGVK----EDTGAKIELLLLKQLEGDKWETLAKPAKRVKKGTTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L AT I++ + G ++ + GI L + +G +PLPPYI K +D D Y
Sbjct: 111 -GEGLLTATCIEETDQGGRVVELAYEGI-LHEVLDQLGEMPLPPYI--KEQLD--DQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS AAPTAGLHFT +LL L G+ + F+TLHVG GTF PV VED + H M
Sbjct: 165 QTVFAKNRGSAAAPTAGLHFTEDLLQTLQDKGVHLAFITLHVGLGTFRPVSVEDVESHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA+ LN VK GG++V+VGTTS R LET E+G SG+T+IFI PG
Sbjct: 225 HAEYYQMSEGTARLLNEVKENGGKVVAVGTTSARTLETIMNENGTYCEASGWTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y+F+ +D L++NFHLPKSTL+MLVSA G E + Y HA+ YRF+S+GD
Sbjct: 285 YKFKGIDGLLTNFHLPKSTLVMLVSALAGREHILQAYNHAVKERYRFFSFGD 336
>gi|15613790|ref|NP_242093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
halodurans C-125]
gi|20139775|sp|Q9KDI6|QUEA_BACHD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|10173843|dbj|BAB04946.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus halodurans
C-125]
Length = 347
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 215/360 (59%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RL+V+ + + D DL F+ + D +V
Sbjct: 1 MNVRDFDFHLPEKLIAQTPLKDRTASRLLVLDKHTGA---VEDKKFPDLLQFIEAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ L ++ + W +P+K +K G I+ F
Sbjct: 58 LNDTRVLPARLFGVK----EETGAQVEVLLLKQMEGDRWETLVKPAKRLKVGTIIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L AT + + G +L FS GI + +G +PLPPYI K +D +D Y
Sbjct: 111 -GNGELTATCVQELEHGGRVLEFSYEGI-FHEVLDQLGEMPLPPYI--KEQLDDKDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVFAKNRGSAAAPTAGLHFTEELLDQLKQKGVHLAFITLHVGLGTFRPVSVEEIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A TA+ LN VK +GGRI++VGTTS R LET E SG+T+IFI PG
Sbjct: 225 HAEFYQMSAGTARLLNEVKRQGGRIIAVGTTSARTLETIRQEHDEFVETSGWTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y F+ +D L++NFHLPKSTL+MLVSA G E Y HA+ +YRF+S+GD ++ K+
Sbjct: 285 YEFKGIDGLITNFHLPKSTLVMLVSALAGRENLLNAYAHAVKQSYRFFSFGDAMFIYDKK 344
>gi|319790693|ref|YP_004152326.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermovibrio ammonificans HB-1]
gi|317115195|gb|ADU97685.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermovibrio ammonificans HB-1]
Length = 343
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 208/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA P PRDSARLMV+H + I + D+ +L D +V
Sbjct: 1 MKVSDFDYHLPKELIAKFPAEPRDSARLMVLHRDTGE---IEHRIFRDIVDYLVPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R + + L +V P+ W V A+P+K +K G L F
Sbjct: 58 LNDTKVIPARLLG-RLSTGAK----VELLLLRQVEPDLWEVMAKPAKKLKTGKELVF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARK-RPIDARDYV 178
+ L TV G L+ F + G+ + VG +PLPPYI R+ RP D + Y
Sbjct: 110 --EGGLRGTVEGYAGEGRRLVRFRVPEGVSFMELLEQVGHVPLPPYIEREERPEDRKLY- 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT +A G+VAAPTAGLHFT LL RL GI + VTLHVG GTF PVKVE+ + H
Sbjct: 167 --QTVFASRPGAVAAPTAGLHFTEELLERLRDKGIIIKTVTLHVGPGTFKPVKVEEVEKH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M E+ + TA +N K G RIV+VGTT +R LE+A EDG + G TN+FI
Sbjct: 225 QMDYEVYSVPQETALEVNRAKQEGRRIVAVGTTVVRTLESAAGEDGTVKAGEGSTNLFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF+ VD L++NFHLP+STL+MLVSAF G E+ Y+ A+ YRFYSYGD +
Sbjct: 285 PGYRFKVVDALVTNFHLPRSTLIMLVSAFAGREKVLNAYREAVKEGYRFYSYGDAMFI 342
>gi|290580879|ref|YP_003485271.1| putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans NN2025]
gi|254997778|dbj|BAH88379.1| putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans NN2025]
Length = 342
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 220/354 (62%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP + IA P+ RDS++L+VV H + DH++ +L N DA+
Sbjct: 1 MNTSDFDFNLPEALIAQTPLKKRDSSKLLVVDHQKKTMKDTHFDHIIDEL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 57 VMNDTRVLPARLHGEKTV----THGHVELLLLKNIQGDQWEVLAKPAKRLKIGSHISF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+A + ++ N G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLKAIIKEELNHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LLS++ + G+K+ ++TLHVG GTF PV V++ ++H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTEELLSKIEAKGVKLVYLTLHVGLGTFRPVSVDNVEEHQ 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L +K+ GGRIV+VGTTS+R LET + G I SG+TNIFI
Sbjct: 224 MHSEFYSLSPEAAQTLKDIKANGGRIVAVGTTSIRTLETIGNKFAGQIEADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKIVDAFSTNFHLPKSTLVMLVSAFAGRDFILDAYKHAVDKHYRFFSFGD 337
>gi|19746363|ref|NP_607499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS8232]
gi|306827089|ref|ZP_07460386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes ATCC 10782]
gi|24212183|sp|Q8P0D9|QUEA_STRP8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|19748559|gb|AAL97998.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS8232]
gi|304430723|gb|EFM33735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes ATCC 10782]
Length = 342
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGRLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|296132706|ref|YP_003639953.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermincola
sp. JR]
gi|296031284|gb|ADG82052.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermincola
potens JR]
Length = 341
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 212/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA PV PRD +RL+VV+ + I + ++ D +V
Sbjct: 1 MKVADFDFELPEELIAQEPVEPRDHSRLLVVNRDNGN---IEHKRFYNCIDYIEPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L F +I L R+ + W V +P K +K G ++ F
Sbjct: 58 VNNTRVLPARL----FGEKKGSGAKIEFVLLKRIDRDKWEVLVKPGKRVKPGTVILF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G LEA V+ +G L+ F GI E + G +PLPPYI K+ +D R+ Y
Sbjct: 111 -GGGLLEAFVLQTTESGGRLVEFRYEGI-FEELLDRFGQMPLPPYI--KKQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + V LHVG GTF PVKV++ +DH M
Sbjct: 165 QTVYAKASGSAAAPTAGLHFTEELLKKMHEKGVVIAEVMLHVGLGTFRPVKVDNVEDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I+ TA +N + RG +I++VGTTS R LETA G + P G+T+IFI PG
Sbjct: 225 HAEYYEINEETANLINRQRDRGHKIIAVGTTSCRALETAADSSGNLKPGCGWTDIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+AVD L++NFHLPKSTL+MLVSAF G + K YQ AI+ YRF+S+GD ++
Sbjct: 285 YRFKAVDRLITNFHLPKSTLVMLVSAFAGKDLIMKAYQEAIAEKYRFFSFGDAMMIL 341
>gi|158320752|ref|YP_001513259.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus oremlandii OhILAs]
gi|158140951|gb|ABW19263.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus oremlandii OhILAs]
Length = 341
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+DLP IA P+ RD +RLMV+ I+ D+ FLN D +V
Sbjct: 1 METKDFDYDLPEELIAQVPLEHRDQSRLMVLDKETGD---IAHRHFYDIIDFLNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + I L R+ ++W +P K K G F
Sbjct: 58 LNDTRVLPARLIGEKEGSGGK----IEFLLLKRIELDTWEALVKPGKKAKVGSRFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL VI G ++ F G+ E + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLCTEVIGIGEEGSRIIKFQYDGV-FEDILDQLGQMPLPPYITEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K QGS AAPTAGLHFTS LL +L G+K ++TLHVG GTF PVKVE ++H M
Sbjct: 165 QTVYSKNQGSAAAPTAGLHFTSELLKKLEEKGVKTAYITLHVGLGTFRPVKVEKIEEHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K+ G RI++VGTTS R LE+ T+DGII P SG+T+IFI PG
Sbjct: 225 HSEFYTIDDKNANIINEAKANGKRIIAVGTTSCRTLESVATKDGIIEPKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLP+STL+MLVS G E T Y+ A+ YRF+S+GD +
Sbjct: 285 YDFKIVDNLITNFHLPESTLIMLVSTLAGKEATLNAYKIAVKEGYRFFSFGDAMFI 340
>gi|238924342|ref|YP_002937858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
rectale ATCC 33656]
gi|238876017|gb|ACR75724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
rectale ATCC 33656]
gi|291529393|emb|CBK94979.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Eubacterium rectale M104/1]
Length = 352
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD+DLP IA P+ R S+RLMV+ +S H+ ++ +L D +V
Sbjct: 1 MDVKDFDYDLPEELIAQDPLEDRSSSRLMVLDKKTG---EVSHHVFKEIVKYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ + + I L R + W +P K K G + F
Sbjct: 58 LNNTKVIPARLFGVKEGTMAK----IEILLLKRRQNDVWETLVKPGKKAKPGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDVVDDGNRLIQFSYEGI-FEEILDKLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV++ DH M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQVKDKGVDIAEVTLHVGLGTFRPVKVDNVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ K GGRI+SVGTTS R LE A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYMVSQEAADKINNAKKNGGRIISVGTTSTRTLEAASDENGMLKECSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YSFKVIDCLITNFHLPQSTLVMLVSALAGREHVLNAYKEAVEERYRFFSFGDAMFI 340
>gi|291525119|emb|CBK90706.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Eubacterium rectale DSM 17629]
Length = 352
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD+DLP IA P+ R S+RLMV+ +S H+ ++ +L D +V
Sbjct: 1 MDVKDFDYDLPEELIAQDPLEDRSSSRLMVLDKKTG---EVSHHVFKEIVKYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ + + I L R + W +P K K G + F
Sbjct: 58 LNNTKVIPARLFGVKEGTMAK----IEILLLKRRQNDVWETLVKPGKKAKPGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDVVDDGNRLIQFSYEGI-FEEILDKLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV++ DH M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQVKDKGVDIAEVTLHVGLGTFRPVKVDNVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ K GGRI+SVGTTS R LE A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYMVSQEAADKINNAKKNGGRIISVGTTSTRTLEAASDENGMLKECSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YSFKVIDCLITNFHLPQSTLVMLVSALAGREHVLNAYKEAVEERYRFFSFGDAMFI 340
>gi|324990584|gb|EGC22520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK353]
Length = 342
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSHISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVNSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T K Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLKAYEHAIAERYRFFSFGD 337
>gi|291562523|emb|CBL41339.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[butyrate-producing bacterium SS3/4]
Length = 341
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+F+LPP IA P+ R ++RL+V+ I D+ +L D +V
Sbjct: 1 MNVTDFNFELPPELIAQDPLEDRAASRLLVLDKKTG---EIEHRHFRDILKYLKKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G H + I L R S N W +P K +K G + F
Sbjct: 58 INDTKVIPARLMG----HKIGTDAGIEVLLLKRKSDNVWETLVKPGKKMKVGAEVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ VID + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLKGKVIDVVDEGNRLIQFEYDGI-FEEILDKLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + +G+K+ VTLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLQEIEEMGVKIAHVTLHVGLGTFRPVKVDTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GGR++ VGTTS R LE+AT +DGI+ SG+T IFI PG
Sbjct: 225 HSEFYMVEESEAKKINDTKANGGRVICVGTTSCRTLESATGDDGILKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E YQ AI YRF+S+GD +
Sbjct: 285 YKFKILDCLITNFHLPESTLVMLVSALAGREHILNAYQEAIKERYRFFSFGDAMFI 340
>gi|327461604|gb|EGF07935.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1]
gi|327489463|gb|EGF21256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1058]
Length = 342
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ F+ GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFAYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKGNGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAEHYRFFSFGD 337
>gi|167037429|ref|YP_001665007.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256752587|ref|ZP_05493441.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus CCSD1]
gi|320115842|ref|YP_004186001.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|238687693|sp|B0K958|QUEA_THEP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166856263|gb|ABY94671.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256748525|gb|EEU61575.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus CCSD1]
gi|319928933|gb|ADV79618.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 341
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 209/359 (58%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLM+++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRASSRLMILNKKTGE---IEHDIFKNITKYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNTKVI A+L I RRE +I L R+S N W + +P + K G F
Sbjct: 58 LNNTKVIPARL-------IGRREDSGGKIEFVLLKRISNNEWEILVKPGRRAKIGSKFVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A ++D + G ++ F G+ E + +G +P+PPYI +K R
Sbjct: 111 ----GNGELIAEILDTTDVGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKKLKNKDR-- 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++
Sbjct: 164 --YQTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEVIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A+ +N + GGRI++VGTTS R LET EDG I SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAAEEINETRKSGGRIIAVGTTSTRTLETVADEDGYIKEKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ A+ YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAVEKKYRFFSFGDAMLI 340
>gi|187778350|ref|ZP_02994823.1| hypothetical protein CLOSPO_01942 [Clostridium sporogenes ATCC
15579]
gi|187771975|gb|EDU35777.1| hypothetical protein CLOSPO_01942 [Clostridium sporogenes ATCC
15579]
Length = 341
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 212/364 (58%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I D + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKKTG---EIEDKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNG--------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGSKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLEKIKGKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +HIMHSE +D TA+ +N+ + +GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHIMHSEYYKMDKKTAKIINTTREKGGRVIAVGTTSCRTLETIGDIEGKVKEQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNMAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|171778635|ref|ZP_02919731.1| hypothetical protein STRINF_00583 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282592|gb|EDT48016.1| hypothetical protein STRINF_00583 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 342
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/354 (45%), Positives = 214/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+V+ H DH++ +L NS DA+
Sbjct: 1 MHTDDFDFNLPEELIAQTPLEKRDSSKLLVIDHKTHEMVDAHFDHILDEL----NSGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K + G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTEGDQWEVLAKPAKRLHVGVKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K R
Sbjct: 111 --GDGRLTATVVEELDNGGRIVEFDYDGIFLEVLESL-GEMPLPPYIHEKLDDPNR---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ +VTLHVG GTF PV V++ ++H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTKELLEKIEAKGVKLVYVTLHVGLGTFRPVSVDNVEEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ GGR+V+VGTTS+R LET ++ +G I SG+TNIFI
Sbjct: 224 MHSEFYRLSEEAAQTLRDVKATGGRVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD
Sbjct: 284 PGYDFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDERYRFFSFGD 337
>gi|167040096|ref|YP_001663081.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X514]
gi|300914179|ref|ZP_07131495.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X561]
gi|307724585|ref|YP_003904336.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X513]
gi|238687548|sp|B0K0M0|QUEA_THEPX RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166854336|gb|ABY92745.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X514]
gi|300889114|gb|EFK84260.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X561]
gi|307581646|gb|ADN55045.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X513]
Length = 341
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 208/359 (57%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLM+++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRASSRLMILNKKTGE---IEHDIFKNITKYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNTKVI A+L I RRE +I L R+S N W + +P + K G F
Sbjct: 58 LNNTKVIPARL-------IGRREDSGGKIEFVLLKRISNNEWEILVKPGRRAKIGSKFVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A ++D G ++ F G+ E + +G +P+PPYI +K R
Sbjct: 111 ----GNGELIAEILDTTEVGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKKLKNKDR-- 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++
Sbjct: 164 --YQTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEVIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A+ +N + GGRI++VGTTS R LET EDG I SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAAEEINETRKSGGRIIAVGTTSTRTLETVADEDGYIKEKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ A+ YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAVEKKYRFFSFGDAMLI 340
>gi|71903796|ref|YP_280599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS6180]
gi|94988817|ref|YP_596918.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS9429]
gi|94992703|ref|YP_600802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS2096]
gi|139473569|ref|YP_001128285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes str. Manfredo]
gi|91207330|sp|Q48SR6|QUEA_STRPM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218745|sp|Q1JB00|QUEA_STRPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218746|sp|Q1JL45|QUEA_STRPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218749|sp|A2RDX5|QUEA_STRPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71802891|gb|AAX72244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS6180]
gi|94542325|gb|ABF32374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS9429]
gi|94546211|gb|ABF36258.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS2096]
gi|134271816|emb|CAM30050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes str. Manfredo]
Length = 342
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGRLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET + G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGGKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|209559631|ref|YP_002286103.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes NZ131]
gi|238058400|sp|B5XM46|QUEA_STRPZ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209540832|gb|ACI61408.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Streptococcus pyogenes NZ131]
Length = 342
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----TDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGHLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|307266566|ref|ZP_07548098.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter wiegelii Rt8.B1]
gi|306918420|gb|EFN48662.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 341
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 212/359 (59%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ + + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRSSSRLMVLNRKTGE---VQHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L I RR+ +I L R+S N W +P + K G + F
Sbjct: 58 LNDTKVIPARL-------IGRRQDSGGKIEFVLLKRLSVNEWETLVKPGRRAKVGTRVVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A ++D G ++ F G+ E + +G +P+PPYI +K +D
Sbjct: 111 ----GNGELVAEILDNTEVGGRVVRFYYEGV-FEEVLDKLGEMPVPPYIKKK----LKDK 161
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++
Sbjct: 162 ERYQTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEIIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A+ +N+ + +GGR+++VGTTS R LET E+G I SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAAEEINATREKGGRVIAVGTTSTRTLETVADENGYIREKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYQVAIEERYRFFSFGDAMLI 340
>gi|152976836|ref|YP_001376353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus subsp. cytotoxis NVH 391-98]
gi|189038510|sp|A7GTA0|QUEA_BACCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152025588|gb|ABS23358.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Bacillus
cytotoxicus NVH 391-98]
Length = 350
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I SD+ A+L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEKRETSRLMVLDRETGD---IEHKHFSDILAYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCVGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+K+ F+TLHVG GTF PV + +DH M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLQQKGVKLAFITLHVGLGTFRPVSTDKIEDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET TE DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSQETADLLNDVKVNGGRIITVGTTSTRTLETIATEHDGKLCGASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF G E Y A+ YRF+S+GD L
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFAGRENVLHAYNEAVKEKYRFFSFGDAMFL 341
>gi|228478265|ref|ZP_04062873.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus salivarius SK126]
gi|228249944|gb|EEK09214.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus salivarius SK126]
Length = 347
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 219/355 (61%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RD+++L+V+ P ++ + + DH++ L N DA
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDP-VTKEMTDTHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----PDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV ++ + G ++ F+ GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 ---GDGRLTATVTEELDHGGRIVEFNYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A LNSVK+ GGRI++VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYTLSQDAADTLNSVKAAGGRIIAVGTTSIRTLETIGNKYDGQLQADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD
Sbjct: 283 KPGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGD 337
>gi|224476737|ref|YP_002634343.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus carnosus subsp. carnosus TM300]
gi|222421344|emb|CAL28158.1| putative S-adenosylmethionine tRNA ribosyltransferase
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 341
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP IA P+ RD++RL+V+H + D+ ++NS D +V
Sbjct: 1 MNIEEFDYDLPEELIAQTPLKDRDTSRLLVLHKENGE---LEHRHFKDIIEYINSGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ + ++ + ++ + W V +P+K IK G L F
Sbjct: 58 LNDTKVMPARLFGVK----QETKAKVEMLMLTQIEGDDWEVLLKPAKRIKVGQKLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++EA I++ + G ++ S GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GEGKIEAECIEELDQGGRIMRLSYEGI-LQERLDELGEMPLPPYIKER----LEDQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKATGSAAAPTAGLHFTDELLDELKAKGVNLAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNQTKQNGKRIISVGTTSTRTLETIRRDYDTFTAASGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSRQYILNAYRTAVEMKYRFFSFGDAMLI 340
>gi|89895210|ref|YP_518697.1| hypothetical protein DSY2464 [Desulfitobacterium hafniense Y51]
gi|219669641|ref|YP_002460076.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfitobacterium hafniense DCB-2]
gi|122482413|sp|Q24UN9|QUEA_DESHY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764274|sp|B8FQV3|QUEA_DESHD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|89334658|dbj|BAE84253.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539901|gb|ACL21640.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfitobacterium hafniense DCB-2]
Length = 341
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF+LP RIA PV PRDS+RLMV++ I + +LP L + D +V
Sbjct: 1 MKLEDFDFELPEDRIAQHPVEPRDSSRLMVMN---RWTGEIEHRVFRELPELLQAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + + +I C L R + W +P K +K G + F
Sbjct: 58 VNNTRVIPARLIGEK----EGTQAKIECLLLTRRDKDVWETLIKPGKRLKAGQTVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L +++ G L+ F+ GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLRGELLEILPDGNRLVRFNYQGI-FEEVLDQLGNMPLPPYITEQ----LQDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL RL G+++ + LHVG GTF PVKVE+ ++H M
Sbjct: 165 QTIYAKESGSAAAPTAGLHFTPELLERLQDKGVEIVEILLHVGLGTFRPVKVENVEEHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N KS+G R+++VGTT+ R LE+ E+G I G+T+I+I PG
Sbjct: 225 HSEYYRVTPDAAERINRAKSQGRRVIAVGTTASRTLESVAGENGRIEGKEGWTDIYIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFH PKSTL+MLVSA G ++ K YQ AI+ YRFYS+GD ++
Sbjct: 285 YTFKILDGLITNFHFPKSTLVMLVSALAGRDQILKAYQIAIAEGYRFYSFGDAMMIL 341
>gi|118444595|ref|YP_877907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
novyi NT]
gi|118135051|gb|ABK62095.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
novyi NT]
Length = 344
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 204/354 (57%), Gaps = 16/354 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
VK+FDF LP IA P+ RD +RLMVV I + D+ +LN D +V N
Sbjct: 6 VKDFDFYLPQELIAQHPMEKRDESRLMVVDRKSGQ---IEHKIFRDILGYLNEGDCLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + +I L R+ ++W +P K K G F G
Sbjct: 63 NTRVLPARLIGEK----ENTGGKIEFLLLRRIEGDTWETLVKPGKKAKIGARFVF----G 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+A V G ++ F GI E + +G +PLPPYI + D YQT
Sbjct: 115 SGELKAEVKSMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITER----LEDKERYQT 169
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K +GS AAPTAGLHFT LL + GIK+ FVTLHVG GTF PVKVE+ ++H MHS
Sbjct: 170 VYSKEKGSAAAPTAGLHFTEELLKEIKEKGIKIAFVTLHVGLGTFRPVKVENIEEHHMHS 229
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + TA +N+ K GG+I++VGTTS R LET EDG + SG+T+IF+ PGY+
Sbjct: 230 EYYTMSKETADIINNTKENGGKIIAVGTTSCRTLETIGDEDGKVRETSGWTDIFMYPGYK 289
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ + YRF+S+GD L
Sbjct: 290 FKVVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVKNKYRFFSFGDAMFL 343
>gi|83590531|ref|YP_430540.1| S-adenosylmethionine [Moorella thermoacetica ATCC 39073]
gi|123524237|sp|Q2RHU2|QUEA_MOOTA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|83573445|gb|ABC19997.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Moorella
thermoacetica ATCC 39073]
Length = 342
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 217/357 (60%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD++LPP +IA +PV PRD++RL+V+H + DLP +L+ D +V
Sbjct: 1 MRIEEFDYELPPGQIAQQPVEPRDASRLLVLHREGGF---LEHRHFYDLPRYLHPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G R +I L R ++W RP + + G L F
Sbjct: 58 VNETKVIPARLWGYRAG----TGAKIEVLLLTRQEGDTWETLVRPGRRVPVGAELIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V G ++ FS E + +G +PLPPYI +++P D Y
Sbjct: 111 -GRGELQARVKGVTPAGGRIMEFSYQEGPWEALLERLGEMPLPPYI-KEKPADPGRY--- 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL L GI++ + LHVG GTF PVKVE+ +H+M
Sbjct: 166 QTVYAREEGSAAAPTAGLHFTPRLLKELREQGIEIASILLHVGLGTFRPVKVENIQEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A +N+ ++RG R+V+VGTT +R LET T DG+I+ SG+T+IFI PG
Sbjct: 226 HAEYYAVTPAAAATINAARARGHRVVAVGTTVVRTLETVATADGVIHAGSGWTDIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+A+D L++NFHLP+STLLMLVSAF G E+ Y+ A+ YRFYS+GD L+
Sbjct: 286 YRFKAIDSLITNFHLPRSTLLMLVSAFAGREKILDAYRVAVREGYRFYSFGDAMLIL 342
>gi|15675321|ref|NP_269495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes M1 GAS]
gi|71910953|ref|YP_282503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS5005]
gi|21263910|sp|Q99Z49|QUEA_STRP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13622501|gb|AAK34216.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes M1 GAS]
gi|71853735|gb|AAZ51758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS5005]
Length = 342
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 214/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNNFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGRLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET + G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGGKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|259046888|ref|ZP_05737289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella adiacens ATCC 49175]
gi|259036511|gb|EEW37766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella adiacens ATCC 49175]
Length = 345
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 207/350 (59%), Gaps = 17/350 (4%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
K+FDFDLP IA P+ R S+RL++V I D SDL L + D +V NN
Sbjct: 6 KDFDFDLPEELIAQTPLKDRTSSRLLMVD---KTKHTIEDRHFSDLLEELEAGDTLVVNN 62
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T+V+ A+L G + I L + W +P+K +K G ++ F G
Sbjct: 63 TRVLPARLYGTK----EETGAHIEVLLLTNTEGDKWETLVKPAKRMKVGSVVSF----GD 114
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
RL+ATVI++ G ++ FS G+ LE SL G +PLPPYI + D YQT
Sbjct: 115 GRLKATVIEELEQGGRIIEFSYEGVFLEVLESL-GEMPLPPYIKER----LEDKERYQTV 169
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
YAK GS AAPTAGLHFT L+ ++ G+ + VTLHVG GTF PV V+ +DH MHSE
Sbjct: 170 YAKENGSAAAPTAGLHFTEELMQQIRDKGVNIVPVTLHVGLGTFRPVSVDSLEDHKMHSE 229
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYR 302
+ TA + + K G R+++VGTTS+R LET A DG + P SG+T+IFI+PGY
Sbjct: 230 YYNVSKETADMIEATKKAGKRVIAVGTTSIRTLETVARDNDGHVVPASGWTDIFISPGYE 289
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
F VD ++NFHLPKSTL+MLVSA+ G E T + YQHAI YRF+S+GD
Sbjct: 290 FGVVDAFVTNFHLPKSTLVMLVSAYLGREFTLEAYQHAIEERYRFFSFGD 339
>gi|168187975|ref|ZP_02622610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum C str. Eklund]
gi|169294189|gb|EDS76322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum C str. Eklund]
Length = 341
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV I + D+ +LN D +V
Sbjct: 1 MKVKDFDFYLPQELIAQHPMEKRDESRLMVVDRKSGQ---IEHKIFKDILGYLNKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ ++W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDTWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GSGELKAEVRAMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITER----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + GIK+ FVTLHVG GTF PVKVED + H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKEKGIKIVFVTLHVGLGTFRPVKVEDIEKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N+ K GG+I++VGTTS R LET E G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETAEIINNTKENGGKIIAVGTTSCRTLETIGDECGKVRETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ + YRF+S+GD L
Sbjct: 285 YKFKVVDRLITNFHLPQSTLLMLVSAFSTRENIMNAYKEAVENKYRFFSFGDAMFL 340
>gi|253681405|ref|ZP_04862202.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum D str. 1873]
gi|253561117|gb|EES90569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum D str. 1873]
Length = 341
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV I + D+ + N D +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDESRLMVVDRKSGH---IEHKIFKDILGYFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDKWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI K R Y
Sbjct: 111 -GSGELKAEVKGMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITEKLDDKER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+K+ FVTLHVG GTF PVKVED ++H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTKELLKEIENKGVKIAFVTLHVGLGTFRPVKVEDIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K GG++++VGTTS R LET E+G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETADIINKTKENGGKVIAVGTTSCRTLETIGDENGKVKETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ YRF+S+GD L
Sbjct: 285 YKFKIVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVDEKYRFFSFGDAMFL 340
>gi|94990719|ref|YP_598819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10270]
gi|166218747|sp|Q1JG69|QUEA_STRPD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|94544227|gb|ABF34275.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10270]
Length = 342
Score = 278 bits (711), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GNGHLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|324995358|gb|EGC27270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK678]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTKGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKVNGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIRP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYNWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|310643556|ref|YP_003948314.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Paenibacillus polymyxa SC2]
gi|309248506|gb|ADO58073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (Queuosine
biosynthesis protein) [Paenibacillus polymyxa SC2]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 217/359 (60%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DF+LP + IA P+ R ++RL+ ++ N + H SD+ +L D +V
Sbjct: 1 MNVNDYDFELPETLIAQTPLLERTASRLLTLNKNNGE---VGHHTFSDIVQYLQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + E L ++ + W +P K +KKG ++ F +
Sbjct: 58 LNDTRVIPARLFGIKQDTGAKAE----VLLLKQLEGDRWEALVKPGKKLKKGAVIVFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A + ++ + G +L FS GI + + +G +PLPPYI K +D R+ Y
Sbjct: 114 -----LKAVIEEEGDMGGRVLSFSYDGI-FQEILDRLGQMPLPPYI--KEQLDDRER--Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL R+ G+ V F+TLHVG GTF P+ V+ ++H+M
Sbjct: 164 QTVYARHEGSAAAPTAGLHFTEELLDRIKEKGVTVAFITLHVGLGTFRPMSVDTIEEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN+ K+RGGR+V+VGTTS R LET + DG++ SG+T IFI
Sbjct: 224 HEEYYSLSQETADVLNATKARGGRVVAVGTTSCRTLETVGSNFVDGVLQASSGWTQIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FR VD +++NFHLPKSTL+MLVSA G + YQ AI YRF+S+GD ++
Sbjct: 284 PGYEFRVVDAMITNFHLPKSTLVMLVSALAGRKNIMHAYQEAIDQKYRFFSFGDAMFIY 342
>gi|306833044|ref|ZP_07466176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus bovis ATCC 700338]
gi|304424943|gb|EFM28077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus bovis ATCC 700338]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 218/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+V+ H DH++ +L N DA+
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDHKTHEMVDAHFDHILDEL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLRVGVKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV+++ + G ++ F+ GI LE SL G +PLPPYI K +D D
Sbjct: 111 --GDGRLTATVVEELDHGGRVVEFAYDGIFLEVLESL-GEMPLPPYIHEK--LDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT +LL+++ + G+K+ ++TLHVG GTF PV V++ ++H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQDLLAKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ GGR+V+VGTTS+R LET ++ +G I SG+TNIFI
Sbjct: 224 MHSEFYTLSEEAAQTLRDVKAAGGRVVAVGTTSIRTLETIGSKFNGDIKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY F+ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD
Sbjct: 284 PGYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYQHAIDEHYRFFSFGD 337
>gi|21910602|ref|NP_664870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS315]
gi|25091088|sp|Q8K6Z3|QUEA_STRP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21904803|gb|AAM79673.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS315]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGHLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|327468945|gb|EGF14417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK330]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GG +++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGHVIAVGTTSIRTLETIGSKFQGQIEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|324993331|gb|EGC25251.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK405]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 208/354 (58%), Gaps = 17/354 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQAPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNIQDDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVVDELEHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVNLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAHTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDA 338
>gi|319947352|ref|ZP_08021585.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus australis ATCC 700641]
gi|319746594|gb|EFV98854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus australis ATCC 700641]
Length = 342
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 211/354 (59%), Gaps = 17/354 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++++ + D + L DA+V
Sbjct: 1 MNTNDFDFHLPEELIAQTPLEKRDASKLLILNRQTGQ---MEDQHFDAIINELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + + W V A+P+K +K+G ++ F
Sbjct: 58 MNNTRVLPARLHGVK----PDTGGHVELLLLKNIEGDQWEVLAKPAKRLKEGGVVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+I K G ++ FS GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLQATLIKKLEHGGCIVEFSYQGIFLEVLESL-GEMPLPPYIHEK----LEDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V++ D H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEDKGVHLVYLTLHVGLGTFRPVSVDNLDQHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ G RIV+VGTTS+R LET + +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAQTLRQVKASGHRIVAVGTTSIRTLETIGNKFNGELQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY+++ VD +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 285 GYQWQVVDAFSTNFHLPKSTLVMLVSAFAGRELTLNAYQHAIDQGYRFFSFGDA 338
>gi|308070377|ref|YP_003871982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Paenibacillus polymyxa E681]
gi|305859656|gb|ADM71444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Paenibacillus polymyxa E681]
Length = 342
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 217/359 (60%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DF+LP + IA P+ R ++RL+ ++ N + H SD+ +L D +V
Sbjct: 1 MNVNDYDFELPETLIAQTPLLDRSASRLLTLNKNNGE---VGHHTFSDIVQYLQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + E L ++ + W +P K +KKG ++ F +
Sbjct: 58 LNDTRVIPARLFGIKEDTGAKAE----VLLLKQLQGDRWKALVKPGKKLKKGAVIVFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A + ++ + G +L FS GI + ++ +G +PLPPYI K +D R+ Y
Sbjct: 114 -----LKAVIEEEGDMGGRVLSFSYDGI-FQEILNRLGQMPLPPYI--KEQLDDRER--Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL ++ G+ V F+TLHVG GTF P+ V+ ++H+M
Sbjct: 164 QTVYARHEGSAAAPTAGLHFTEELLDQIKKKGVTVAFITLHVGLGTFRPMSVDTIEEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K+RGGR+V+VGTTS R LET + DG++ SG+T IFI
Sbjct: 224 HEEYYSLSQETADVLNETKARGGRVVAVGTTSCRTLETVGNKFLDGVLEASSGWTQIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FR VD +++NFHLPKSTL+MLVSA G E YQ AI YRF+S+GD ++
Sbjct: 284 PGYEFRVVDAMITNFHLPKSTLVMLVSALAGRENIMHAYQEAIDRQYRFFSFGDAMFIY 342
>gi|149202089|ref|ZP_01879062.1| Queuosine biosynthesis protein [Roseovarius sp. TM1035]
gi|149144187|gb|EDM32218.1| Queuosine biosynthesis protein [Roseovarius sp. TM1035]
Length = 362
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 226/358 (63%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL+V I+D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRRAARLLVAEGE-----GITDAGVADLGRWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R + + +I TL + SW +P K + +G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRSGAQGDTAAKIEVTLLEPGADGSWGALIKPLKKVSEGEEIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A ++ K G+ L F++ G + + ++ G +PLPPYIA +RP D +D V
Sbjct: 115 ----SERLSAVLLAK-EEGQGRLRFNLVGDDFDAALAEAGAMPLPPYIAARRPADEQDKV 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L ++G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARAPGAVAAPTASLHFDEALLAELAALGVGFSHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + ++ GGRI+ VGTT+LRL+ETA G I WSG T+IFI
Sbjct: 230 RMHAEWGEVSAKAAAEMAATRAAGGRIIPVGTTALRLIETAARATGEIAAWSGDTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D LM+NFHLPKSTL+MLVSA G + +++Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVADALMTNFHLPKSTLMMLVSALMGQDTIRRIYAHAVAARYRFFSYGDASLL 347
>gi|283795917|ref|ZP_06345070.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. M62/1]
gi|291076554|gb|EFE13918.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. M62/1]
Length = 341
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + D+ +LN D +V
Sbjct: 1 MDVKDFYFDLPQELIAQDPLEDRASSRLLVLDRSTG---EVEHRKFRDILEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRKENDIWETLVKPGKKAKPGTVIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGILKGTVVDVVEEGNRLIQFSYEGI-FEEILDQLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLQEIEDRGVKIAHVTLHVGLGTFRPVKVENVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +NS K GGR++ VGTTS R +E+A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYVVEKSEAEKINSTKREGGRVICVGTTSCRTIESASDENGVLKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKILDCLITNFHLPESTLVMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|295090985|emb|CBK77092.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Clostridium cf. saccharolyticum K10]
Length = 341
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + D+ +LN D +V
Sbjct: 1 MDVKDFYFDLPQELIAQDPLEDRASSRLLVLDRSTG---EVEHRKFRDILEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRKENDIWETLVKPGKKAKPGTVIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGILKGTVVDVVEEGNRLIQFSYEGI-FEEILDQLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLQEIEDRGVKIAHVTLHVGLGTFRPVKVENVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +NS K GGR++ VGTTS R +E+A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYVVEESEAEKINSTKREGGRVICVGTTSCRTIESASDENGVLKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKILDCLITNFHLPESTLVMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|150016410|ref|YP_001308664.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
beijerinckii NCIMB 8052]
gi|189038514|sp|A6LTM8|QUEA_CLOB8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149902875|gb|ABR33708.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium beijerinckii NCIMB 8052]
Length = 341
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEQRDSSRLMVLDKKTGE---IKHKKFHDIIEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + I L R+ + W A+P K K G F
Sbjct: 58 LNNTRVMPARLIGEKEGTGGK----IEFLLLKRIEKDRWECLAKPGKSAKVGRKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V++ G ++ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGKLKAEVVEVEENGNRIVEFFYDGI-FEEVLDSLGEMPLPPYIHER----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL + + GI + ++TLHVG GTF PVKVE ++H M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTKELLQEIKNKGINIVYLTLHVGLGTFRPVKVESLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A +N K RG ++SVGTTS R LET E+G + SG+TNIFI PG
Sbjct: 225 HSEFYMLSKESADIINETKKRGNAVISVGTTSTRTLETIGDENGFVKEQSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A++ YRF+S+GD +
Sbjct: 285 YKFKVVDKLITNFHLPESTLIMLVSTLAGRENVMNAYEEAVNEKYRFFSFGDAMFI 340
>gi|325688305|gb|EGD30324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK72]
Length = 342
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 210/354 (59%), Gaps = 17/354 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTKGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQILRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYNWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDA 338
>gi|302385235|ref|YP_003821057.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
saccharolyticum WM1]
gi|302195863|gb|ADL03434.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
saccharolyticum WM1]
Length = 349
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++F+F+LP IA P+ R ++RL+V+ + I D+ ++L D +V
Sbjct: 1 MNVRDFNFNLPQELIAQDPLEDRSASRLLVLDKHTG---EIQHRHFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ E +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----EGTEAKIEILLLKRRENDIWETLVKPGKKAKMGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TVID G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLKGTVIDVVEEGNRLIQFSYEGI-FEEILDRLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + +G+ + VTLHVG GTF PVKV++ + H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLKEIEDMGVSIAHVTLHVGLGTFRPVKVDEIEAHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGRIV VGTTS R +E+A+ DG++ SG+T IFI PG
Sbjct: 225 HSEFYMVEEEEARKVNDAKKNGGRIVCVGTTSCRTVESASGSDGMLRAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G + Y+ AI YRF+S+GD L
Sbjct: 285 YRFKLLDCLITNFHLPESTLVMLVSALAGRDHVLHAYEEAIKERYRFFSFGDAMFL 340
>gi|329116810|ref|ZP_08245527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parauberis NCFD 2020]
gi|326907215|gb|EGE54129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parauberis NCFD 2020]
Length = 342
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDFDLP IA P+ RDS++L+++ H + DH++ +L N DA+
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHKKETMVDSHFDHIIKEL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + + L S + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTKGHVELLLLKNTSGDQWEVLAKPAKRLRVGSQVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATVI++ G ++ FS GI LE SL G +PLPPYI K R
Sbjct: 111 --GDGRLSATVIEELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEKLEDSER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAATTLRQVKADGGRVIAVGTTSIRTLETIGSKFKGEIVADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G + + Y+HA++ YRF+S+GD
Sbjct: 284 PGYQFTIVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAVNEKYRFFSFGD 337
>gi|187933823|ref|YP_001885223.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B str. Eklund 17B]
gi|238691636|sp|B2TMZ3|QUEA_CLOBB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187721976|gb|ACD23197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B str. Eklund 17B]
Length = 341
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/361 (42%), Positives = 207/361 (57%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ IS D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKETGE---ISHKNFYDIIDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNT+V+ A+L G EKE I L RV + W A+P K + G
Sbjct: 58 LNNTRVMPARLIG---------EKEGTGGKIEFLLLKRVEKDRWECLAKPGKSARVGRRF 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G +L+A V++ + G ++ F GI E + +G +PLPPYI +
Sbjct: 109 TF----GDGKLKAEVVEVKDNGNRIVEFYYEGI-FEEVLDSLGEMPLPPYIHER----LE 159
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+K GS AAPTAGLHFT LL ++ GI + +VTLHVG GTF PVKV+
Sbjct: 160 DRERYQTVYSKENGSAAAPTAGLHFTEELLHKIKDRGINIAYVTLHVGLGTFRPVKVDTI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+DH MHSE + A+ +N+ K RG +++SVGTTS R LET EDG + +G+TNI
Sbjct: 220 EDHEMHSEYYHLSKEDAEVINATKKRGNKVISVGTTSTRTLETIADEDGNVKETNGWTNI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD
Sbjct: 280 FIYPGYKFKVVDRLITNFHLPESTLIMLVSTLAGKEHVMNAYEEAVKEKYRFFSFGDAMF 339
Query: 356 L 356
+
Sbjct: 340 I 340
>gi|52081250|ref|YP_080041.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
licheniformis ATCC 14580]
gi|52786630|ref|YP_092459.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
licheniformis ATCC 14580]
gi|319644783|ref|ZP_07999016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. BT1B_CT2]
gi|81609021|sp|Q65GP8|QUEA_BACLD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52004461|gb|AAU24403.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus
licheniformis ATCC 14580]
gi|52349132|gb|AAU41766.1| QueA [Bacillus licheniformis ATCC 14580]
gi|317392592|gb|EFV73386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. BT1B_CT2]
Length = 342
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDFDLP IA P+ RD++RLMV+ I+ + FLN+ D IV
Sbjct: 1 MKVELFDFDLPERLIAQVPLKERDASRLMVLDKKTG---EITHSTFKHVIDFLNAGDCIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ L + + W +P+K +K+G +L F
Sbjct: 58 LNDTRVLPARLYGVK----EETGAKVEVLLLKQEEGDVWETLVKPAKRVKRGTVLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ G + F GI E SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLTAVCTEELEHGGRKIEFRYEGIFYEVLESL-GEMPLPPYI--KEQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K QGS AAPTAGLHFT +L L G+ + F+TLHVG GTF PV E+ ++H M
Sbjct: 165 QTVYSKKQGSAAAPTAGLHFTEEILDALREKGVHIAFITLHVGLGTFRPVSAENVEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA LN V+ GGRI+SVGTTS R LET +E DG SG+T+IFI P
Sbjct: 225 HAEFYEMSEETAALLNRVRQEGGRIISVGTTSTRTLETIASEHDGRFREASGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FRA+D +++NFHLPKS+L+MLVSA G E Y+ A+ H YRF+S+GD L+
Sbjct: 285 GYTFRAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRTAVEHEYRFFSFGDAMLI 341
>gi|313890811|ref|ZP_07824436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pseudoporcinus SPIN 20026]
gi|313120912|gb|EFR44026.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pseudoporcinus SPIN 20026]
Length = 342
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 211/354 (59%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDSSKLLIIDHKAKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLHGEK----PDTHGHVELLLLKNIQGDDWEVLAKPAKRLKVGSSISF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATVI + G ++ FS GI LE SL G +PLPPYI K R
Sbjct: 111 --GDGRLTATVIKELEHGGRIVSFSYQGIFLEVLESL-GEMPLPPYIHEKLDDSER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQALLQKIQEKGVHLVYLTLHVGLGTFRPVSVDNVDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A L VK GGR+V+VGTTS+R LET + +G I SG+TNIFI
Sbjct: 224 MHSEFYQLSEEAADTLRQVKKAGGRVVAVGTTSIRTLETIGNKFNGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGYRF VD +NFHLPKSTL+MLVSAF G E + Y+HAI+ YRF+S+GD
Sbjct: 284 PGYRFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAINEHYRFFSFGD 337
>gi|170761651|ref|YP_001788389.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A3 str. Loch Maree]
gi|238688788|sp|B1L0B1|QUEA_CLOBM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169408640|gb|ACA57051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A3 str. Loch Maree]
Length = 341
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 210/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVR--------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGAKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIKEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +H+MHSE +D TA+ +N K +GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHVMHSEYYKMDKETAEIINDTKEKGGRVIAVGTTSCRTLETIGDIEGKVREQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|323352665|ref|ZP_08087635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis VMC66]
gi|322121701|gb|EFX93447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis VMC66]
Length = 342
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ G R+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGDRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|312866079|ref|ZP_07726300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus downei F0415]
gi|311098483|gb|EFQ56706.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus downei F0415]
Length = 342
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 213/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS-DHLVSDLPAFLNSNDAI 59
M ++F+F LP IA P+ RDS++L+V+ N L DH++ +L N DA+
Sbjct: 1 MNTEDFNFHLPEDLIAQTPLEKRDSSKLLVIDHNKHTMLDSHFDHILEEL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L+G + + L + W V A+P+K + G + F
Sbjct: 57 VMNNTRVLPARLHGEK----PETHGHVEFLLLKNTQGDQWEVLAKPAKRLHVGTEVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV+++ G ++ F GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGRLRATVLEELEHGGRIVQFHYEGIFLEVLESL-GEMPLPPYIHEK----LEDQEH 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ +DH
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE AQ L VK+ GGRIV+VGTTS+R LET + +G I SG+TNIFI
Sbjct: 224 MHSEFYQFSEEAAQTLRQVKASGGRIVAVGTTSIRTLETIGNKFNGQIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKLVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAVEEHYRFFSFGD 337
>gi|326390116|ref|ZP_08211677.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus JW 200]
gi|325993764|gb|EGD52195.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus JW 200]
Length = 341
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 212/359 (59%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ + + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRSSSRLMVLNRKTGE---VQHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L I RR+ +I L R+S N W +P + K G + F
Sbjct: 58 LNDTKVIPARL-------IGRRQDSGGKIEFVLLKRLSVNEWETLVKPGRRAKVGTRVVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A ++D G ++ F G+ E + +G +P+PPYI +K +D
Sbjct: 111 ----GNGELVAEILDNTEVGGRVVRFYYEGL-FEEVLDKLGEMPVPPYIKKK----LKDK 161
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++
Sbjct: 162 ERYQTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEIIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A+ +N+ + +GGR+++VGTTS R LET E+G I SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAAEEINATREKGGRVIAVGTTSTRTLETVADENGYIREKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ AI YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAIEERYRFFSFGDAMLI 340
>gi|153940081|ref|YP_001392347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. Langeland]
gi|166216716|sp|A7GHT7|QUEA_CLOBL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152935977|gb|ABS41475.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. Langeland]
gi|295320339|gb|ADG00717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. 230613]
Length = 341
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 209/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNG--------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGSKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G LEA VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELEAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +H+MHSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHVMHSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGDIEGKVGEQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|163790793|ref|ZP_02185219.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. AT7]
gi|159873973|gb|EDP68051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. AT7]
Length = 343
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 213/353 (60%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ K+FDFDLP IA P+ R S++L+++ + D +D+ L+ DA+V
Sbjct: 2 LTTKDFDFDLPEELIAQTPLENRSSSKLLILDKETGK---VEDKHFTDILDELHEGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + W +P+K G+++ F
Sbjct: 59 MNDTRVLPARLHGIK----TETGAHIEILLLKNTENDRWETLVKPAKKATVGNVISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ FS GI LE SL G +PLPPYI + R Y
Sbjct: 112 -GDGRLTATVKEELTHGGRIIDFSYEGIFLEVLESL-GEMPLPPYIKERLEDSER----Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+++ F+TLHVG GTF PV V+ +DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTQELLEQIKAKGVQLVFLTLHVGLGTFRPVSVDSIEDHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A AL +V+ GG+IV+VGTTS+R LET T+ +G + SG+T+IFI+P
Sbjct: 226 HSEFYRLTEESAAALTAVQKNGGKIVAVGTTSIRTLETIGTKFNGELKADSGWTDIFISP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ VD +NFHLPKSTL+MLVSAF G E YQHA+ YRF+S+GD
Sbjct: 286 GYKFKVVDAFSTNFHLPKSTLVMLVSAFAGREHVLAAYQHAVDEKYRFFSFGD 338
>gi|296331683|ref|ZP_06874152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675358|ref|YP_003867030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151278|gb|EFG92158.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413602|gb|ADM38721.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 342
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 213/358 (59%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ + ++D + +F D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + + + W A+P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEAGDRWETLAKPAKRVKKGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F GI E SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLKAVCTEELEHGGRRMEFQYDGIFYEVLESL-GEMPLPPYI--KEQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA ALN V+ GGRI+SVGTTS R LET E DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGRENVLRAYNHAVEEEYRFFSFGDAMLIL 342
>gi|148381020|ref|YP_001255561.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 3502]
gi|153931608|ref|YP_001385391.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 19397]
gi|153935623|ref|YP_001388798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. Hall]
gi|166216714|sp|A7FY18|QUEA_CLOB1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216715|sp|A5I6F0|QUEA_CLOBH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148290504|emb|CAL84632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 3502]
gi|152927652|gb|ABS33152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 19397]
gi|152931537|gb|ABS37036.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. Hall]
Length = 341
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 209/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPIEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVR--------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGAKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +H+MHSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHVMHSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGAIEGKVGEQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|170757777|ref|YP_001782704.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B1 str. Okra]
gi|229598025|sp|B1IMF2|QUEA_CLOBK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169122989|gb|ACA46825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B1 str. Okra]
Length = 341
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 209/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNG--------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGSKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +H+MHSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHVMHSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIADIEGKVGEQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGKDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|298369998|ref|ZP_06981314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sp. oral taxon 014 str. F0314]
gi|298281458|gb|EFI22947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sp. oral taxon 014 str. F0314]
Length = 343
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 215/356 (60%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA P R +RL+ P++ + D SDLP ++ + D +V
Sbjct: 1 MDISDFDFDLPQALIAQHPPKVRGGSRLLAALPDMP----LQDAAFSDLPDYIGAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G +L F
Sbjct: 57 FNNTKVMKARLFGQK-----ESGGKIEALIERVLDGHTALAHIRSSKSPKAGTVLIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A +I++ G++ + G + + G +PLPPYI +R D D Y
Sbjct: 109 --EGGIRAVMIER--AGDLFCLRFDCGQTVYELLEQNGRLPLPPYI--ERAADDDDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V + DH M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVSNIADHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + ++RGGR+ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPPETVAAIEAAQARGGRVWAVGTTSMRALESAARETGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLV+AF G+E + +Y+HA+ H YRF+SYGD LL
Sbjct: 283 YRFNVADRLITNFHLPKSTLLMLVAAFSGMEHIRAVYRHAVEHEYRFFSYGDAMLL 338
>gi|150390105|ref|YP_001320154.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus metalliredigens QYMF]
gi|167016401|sp|A6TQM7|QUEA_ALKMQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149949967|gb|ABR48495.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus metalliredigens QYMF]
Length = 341
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFDFDLP IA P+ RD +RLMV+ N ++ H D+ +LN D +V
Sbjct: 1 MKTNEFDFDLPDRLIAQTPLEKRDHSRLMVLDKNKQE--IVHKHFY-DITDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L GV+ ++ L R+ N+W V +P K K G F
Sbjct: 58 INNTRVLPARLFGVK----ENTGGKMEFLLLKRIDLNTWEVLVKPGKKAKIGSRFEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V+ + G ++ F G+ E + +G +PLPPYI + D Y
Sbjct: 111 -GEGILKAEVLSMADEGARIVRFEYEGV-FEELLDQLGKMPLPPYITE----ELADRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LLS + GI V +TLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYSKHEGSSAAPTAGLHFTPELLSEIKKKGINVVSITLHVGLGTFRPVKVDSLENHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I AQ +N K G R+ +VGTTS R LE+A+TE G I G+TNIFI PG
Sbjct: 225 HAEYYEITEEAAQVINDTKKAGNRVFAVGTTSCRTLESASTEKGKIEANKGWTNIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E+T + Y+ A+ YRF+S+GD L+
Sbjct: 285 YQFKILDGLITNFHLPESTLIMLVSALLGKEKTLQAYKVAVDEQYRFFSFGDAMLI 340
>gi|313895559|ref|ZP_07829115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 137 str. F0430]
gi|312975685|gb|EFR41144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 137 str. F0430]
Length = 346
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 214/360 (59%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP RIA P+ PRD++RLMV+ P I +L L D ++
Sbjct: 1 MDISDFDYDLPEKRIAQTPLEPRDASRLMVLDP---AEQTIEHRHFYELDVLLQPGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R ++ ++ L ++ + W +P K + GD + F +
Sbjct: 58 FNDTRVIPARLIGAR----DKTGAKVEVLLLRQIDRDRWEALVKPGKKARIGDRIRFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +I + G ++ F GI E + +G +PLPPYI RK+ DA Y
Sbjct: 114 -----LSCGIISHTDFGGRIVKFIYQGI-FEEILDRLGEMPLPPYI-RKKLSDADRY--- 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL RL G+ FVTLHVG GTF PV+ + ++H+M
Sbjct: 164 QTIYSRERGSAAAPTAGLHFTEELLVRLKEKGVIFGFVTLHVGLGTFRPVQEQTIENHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TAQ + K+ G RIV+VGTTS+R LE+A E G I P SG+T+IFI PG
Sbjct: 224 HREYYAIPEETAQIIRRAKAEGRRIVAVGTTSIRTLESAAGETGEIRPTSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD ++L Q R
Sbjct: 284 YRFKVVDAIITNFHLPKSTLIMLISAFAGRSFILNAYKQAVDEGYRFFSFGD-AMLIQGR 342
>gi|312623361|ref|YP_004024974.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kronotskyensis 2002]
gi|312203828|gb|ADQ47155.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kronotskyensis 2002]
Length = 346
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 213/358 (59%), Gaps = 22/358 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPDELIAQKPVEPRDSSRLMVILPDGR----IEHRIFRDIVDYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K +KG F +
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGR--RFVFGN 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ + E +++ G ++ F G+ E + +G IPLPPYI K +D D YQ
Sbjct: 115 GELKAEVLHVNR-EEGTRIVRFYYDGV-FEEVLERLGKIPLPPYI--KEELD--DLSRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLHFT LLSR+ G+++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKVPGSAAAPTAGLHFTEELLSRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I A +N K G RI++VGTTS R+LE+ E+G + G+T+IFI PGY
Sbjct: 229 EEYYEISQDVADKINKAKELGKRIIAVGTTSCRVLESCCDENGKVKAKKGWTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 289 EFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|323702061|ref|ZP_08113729.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfotomaculum nigrificans DSM 574]
gi|323532943|gb|EGB22814.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfotomaculum nigrificans DSM 574]
Length = 341
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++D+ LP IA P+ RD +RLMVVH + D+ +L D +V
Sbjct: 1 MRLSDYDYQLPEELIAQEPLVNRDQSRLMVVHKDNQN---FEHKHFKDIINYLQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A++ G R +I L +++ N W +P K + GDIL F
Sbjct: 58 LNDTKVIPARIFGTRIA----TGAKIEVLLLRQLTANRWETLVKPGKKARVGDILDF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ +++ ++D + G ++ FS + + +GT+PLPPYI K+P+ D Y
Sbjct: 111 -GQGQMQGKILDHTDVGGRIIEFSFRE-PFVQVLERIGTMPLPPYI--KKPLA--DQQRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL+ + S G+ V LHVG GTF PV+VED H M
Sbjct: 165 QTVYARQEGSAAAPTAGLHFTPELLAEIRSRGVITVNVLLHVGLGTFRPVQVEDITQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N+ + RGGRI++VGTTS+R LET+ + G + SG T+IFI PG
Sbjct: 225 HEEYYEVTPEAAEKINTARERGGRIIAVGTTSVRCLETSANQAGQVLAGSGLTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ V+ L++NFHLPKSTLLMLVSA G E+ YQ A+ YRF+S+GD L+
Sbjct: 285 YRFKVVEGLITNFHLPKSTLLMLVSALAGREKILAAYQEAVRQRYRFFSFGDAMLI 340
>gi|304436494|ref|ZP_07396468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 149 str. 67H29BP]
gi|304370540|gb|EFM24191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 149 str. 67H29BP]
Length = 343
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 217/360 (60%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP +IA P PRDS+R+MV+ P I L +L D ++
Sbjct: 1 MNISDFDYFLPEEQIAQVPADPRDSSRMMVLSPKTQS---IEHRHFYQLDEYLTDGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GVR + E L ++ + W V +P K ++ G ++ F +
Sbjct: 58 FNDTRVIPARLIGVRQPTGGKAE----VFLLRQLERDRWEVLVKPGKKMRVGSVITFGHE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+ + G ++ FS GI E + +GT+PLPPYI +D Y
Sbjct: 114 -----LSCEVLAYTDFGGRIVKFSYEGI-FEEILERLGTMPLPPYIHET----LQDPERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT L+ RL G+++ FVTLHVG GTF PV+V++ +DH+M
Sbjct: 164 QTIYSREKGSAAAPTAGLHFTEALMDRLRKKGVRLGFVTLHVGLGTFRPVQVDEIEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA + K G R+++VGTTS+R LE+A + G+I G+TNIFI PG
Sbjct: 224 HSEFYSIPTETADLIRMAKQEGRRVIAVGTTSIRTLESAAVDHGMIEAKQGWTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F+ VD +++NFHLPKSTL+MLVSAF G E T K Y+ A+ YRF+S+GD ++L Q R
Sbjct: 284 YQFKIVDAVITNFHLPKSTLIMLVSAFAGREFTLKAYRTAVEENYRFFSFGD-AMLIQSR 342
>gi|288904875|ref|YP_003430097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus UCN34]
gi|306830927|ref|ZP_07464089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325977816|ref|YP_004287532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|288731601|emb|CBI13156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus UCN34]
gi|304426950|gb|EFM30060.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325177744|emb|CBZ47788.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 342
Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 217/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+V+ H DH++ +L N DA+
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDHKTHEMVDAHFDHILDEL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLRVGAKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV+++ + G ++ F+ GI LE SL G +PLPPYI K +D D
Sbjct: 111 --GDGRLTATVVEELDHGGRIVEFAYDGIFLEVLESL-GEMPLPPYIHEK--LDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT +LL+++ + G+K+ ++TLHVG GTF PV V++ ++H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQDLLAKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ G R+V+VGTTS+R LET ++ +G I SG+TNIFI
Sbjct: 224 MHSEFYTLSEEAAQTLRDVKAAGRRVVAVGTTSIRTLETIGSKFNGDIKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY F+ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD
Sbjct: 284 PGYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYQHAIDERYRFFSFGD 337
>gi|251782850|ref|YP_002997153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis GGS_124]
gi|242391480|dbj|BAH81939.1| S-adenosylmethionine/tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis GGS_124]
Length = 342
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 215/356 (60%), Gaps = 23/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS---DHLVSDLPAFLNSND 57
M +FDFDLP IA P+ RDS++L+++ + ++I DH++ L N D
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLII--DHEQKIMIDSHFDHIIDQL----NPGD 54
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
A+V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 55 ALVMNNTRVLPARLYGEK----PDTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G RL AT++++ G ++ F+ GI LE SL G +PLPPYI K R
Sbjct: 111 ----GDGRLTATIVEELEHGGRIVEFNYEGIFLEVLESL-GEMPLPPYIHEKLDDAER-- 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK GS AAPTAGLHFT++LLS++ + G+ + ++TLHVG GTF PV V++ DD
Sbjct: 164 --YQTVYAKENGSAAAPTAGLHFTTDLLSKIDAKGVHLVYLTLHVGLGTFRPVSVDNLDD 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MHSE + AQ L VK GG +V+VGTTS+R LET ++ G I SG+TNIF
Sbjct: 222 HDMHSEFYSLSEEAAQTLRDVKKAGGHVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIF 281
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
I PGY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD
Sbjct: 282 IKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGD 337
>gi|16079825|ref|NP_390650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221310710|ref|ZP_03592557.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221315034|ref|ZP_03596839.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221319955|ref|ZP_03601249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221324236|ref|ZP_03605530.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. SMY]
gi|321312300|ref|YP_004204587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis BSn5]
gi|3914532|sp|O32054|QUEA_BACSU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|2635237|emb|CAB14732.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|6977807|emb|CAB75332.1| QueA protein [Bacillus subtilis subsp. subtilis str. 168]
gi|291485182|dbj|BAI86257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. natto BEST195]
gi|320018574|gb|ADV93560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis BSn5]
Length = 342
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ + ++D + +F N D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + + + W A+P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQETGDKWETLAKPAKRVKKGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F GI E SL G +PLPPYI K +D ++ Y
Sbjct: 111 -GDGRLKAICTEELEHGGRKMEFQYDGIFYEVLESL-GEMPLPPYI--KEQLDDKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV ++ ++H M
Sbjct: 165 QTVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA ALN V+ GGRI+SVGTTS R LET E DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGRENILRAYNHAVEEEYRFFSFGDAMLI 341
>gi|320528956|ref|ZP_08030048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
artemidis F0399]
gi|320138586|gb|EFW30476.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
artemidis F0399]
Length = 346
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 211/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP RIA P+ PRD++RLMV+ P I +L L D ++
Sbjct: 1 MDISDFDYDLPEERIAQTPLEPRDASRLMVLDP---AEQTIEHRHFYELDVLLQPGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R ++ ++ L ++ + W +P K + GD + F +
Sbjct: 58 FNDTRVIPARLIGAR----DKTGAKVEVLLLRQIDRDRWEALVKPGKKARIGDRIRFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +I + G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 114 -----LSCGIISHTDFGGRIVKFIYQGI-FEEILDRLGEMPLPPYIREK----LSDADRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL RL G+ FVTLHVG GTF PV+ + ++H+M
Sbjct: 164 QTIYSRERGSAAAPTAGLHFTEELLVRLKEKGVIFGFVTLHVGLGTFRPVQEQTIENHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TAQ + K+ G RIV+VGTTS+R LE+A E G I P SG+T+IFI PG
Sbjct: 224 HREYYAIPEETAQIIRRAKAEGRRIVAVGTTSIRTLESAAGETGEIRPTSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD ++L Q R
Sbjct: 284 YRFKVVDAIITNFHLPKSTLIMLISAFAGRSFILNAYKQAVDEGYRFFSFGD-AMLIQGR 342
>gi|222528286|ref|YP_002572168.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor bescii DSM 6725]
gi|222455133|gb|ACM59395.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor bescii DSM 6725]
Length = 346
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 214/358 (59%), Gaps = 22/358 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPDELIAQKPVEPRDSSRLMVILPDGR----IEHRIFRDIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE+ I L R+ N+W V RP K +KG F +
Sbjct: 64 KVIPARL-------IGQREETGSFIEFLLIKRLDINTWEVMTRPGKKARKGR--RFVFGN 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ + E +++ G ++ F G+ E + +G IPLPPYI K +D D YQ
Sbjct: 115 GELKAEVLHVNR-EEGTRVVRFYYDGV-FEEVLERLGKIPLPPYI--KEELD--DLSRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLHFT LLSR+ G+++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKVPGSAAAPTAGLHFTEELLSRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I + +N K G R+++VGTTS R+LE+ E+G + G+T+IFI PGY
Sbjct: 229 EEYYEISEDVTERINRAKELGKRVIAVGTTSCRVLESCCDENGKVKAKKGWTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 289 EFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|307692339|ref|ZP_07634576.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcaceae bacterium D16]
Length = 341
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 207/358 (57%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+ + + + H +LP FL D +V
Sbjct: 1 MKTSDFDFYLPEELIAQTPLERRDASRLLTLDKHTG---AVEHHHFYELPQFLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFF 118
NN++VI A+L I R C + + V W RP + +K G + F
Sbjct: 58 LNNSRVIPARL-------IGHRPTGGVCEVLLLVDKGDKCWECLVRPGRKLKPGAQVIF- 109
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
DG + L AT+ + + G+ L+ F GI LE + +G +PLPPYI + +D
Sbjct: 110 -GDG-TELTATIEKELDDGKRLVRFHYEGIFLE-ILERLGKMPLPPYIK----AELQDNE 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ GS AAPTAGLHFT LL ++ +G+KV +VTLHVG GTF PVK ED DH
Sbjct: 163 RYQTVYSKVVGSAAAPTAGLHFTPELLEKVQEMGVKVCYVTLHVGLGTFRPVKAEDIQDH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I TA +N K GGR++ VGTTS R +E+ EDG + SG+TNIFI
Sbjct: 223 EMHSEYCMISQETADVINETKKNGGRVICVGTTSCRTIESFAAEDGTMTERSGWTNIFIY 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 283 PGYRFKVLDALITNFHLPESTLIMLVSALAGREHVLAAYEEAVRERYRFFSFGDAMFI 340
>gi|168179563|ref|ZP_02614227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum NCTC 2916]
gi|168181759|ref|ZP_02616423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Bf]
gi|226950498|ref|YP_002805589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A2 str. Kyoto]
gi|237796525|ref|YP_002864077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Ba4 str. 657]
gi|254764272|sp|C1FKG0|QUEA_CLOBJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|259551441|sp|C3KTD1|QUEA_CLOB6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|182669806|gb|EDT81782.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum NCTC 2916]
gi|182675035|gb|EDT86996.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Bf]
gi|226842049|gb|ACO84715.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A2 str. Kyoto]
gi|229263462|gb|ACQ54495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Ba4 str. 657]
Length = 341
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 210/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKKTGG---IEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVR--------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGAKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIKEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E+ +H+MHSE +D TA+ +N K +GGR+++VGTTS R LET +G + SG+
Sbjct: 217 ENIQEHVMHSEYYKMDKETAEIINDTKEKGGRVIAVGTTSCRTLETIGDIEGKVREQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|312792494|ref|YP_004025417.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179634|gb|ADQ39804.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 346
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 212/359 (59%), Gaps = 24/359 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ + I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPEELIAQKPVEPRDSSRLMVILPDGT----IEHRIFRDIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K +KG F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI K +D D Y
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGV-FEEVLERLGKIPLPPYI--KEELD--DLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL R+ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLDRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E G + G+T+IFI PG
Sbjct: 228 HEEYYEISQDVADKINRAKEVGKRVIAVGTTSCRVLESCSDETGRVKAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YNFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|322807370|emb|CBZ04944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum H04402 065]
Length = 341
Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 209/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNG--------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGSKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +H+MHSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHVMHSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGDIEGKVGEQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|22536961|ref|NP_687812.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 2603V/R]
gi|76787449|ref|YP_329544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae A909]
gi|76798552|ref|ZP_00780784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 18RS21]
gi|77406569|ref|ZP_00783618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae H36B]
gi|77411332|ref|ZP_00787680.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae CJB111]
gi|46577057|sp|Q8E0D7|QUEA_STRA5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207329|sp|Q3K1Q9|QUEA_STRA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|22533815|gb|AAM99684.1|AE014228_5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 2603V/R]
gi|76562506|gb|ABA45090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae A909]
gi|76586086|gb|EAO62612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 18RS21]
gi|77162592|gb|EAO73555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae CJB111]
gi|77174822|gb|EAO77642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae H36B]
Length = 342
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF LP IA P+ RD+++L+V+ H N + DH++ +L DA+
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMTDSHFDHILDEL----KPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----QDTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI
Sbjct: 224 MHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGD 337
>gi|331269240|ref|YP_004395732.1| S-adenosylmethionine--tRNA-ribosyltransferase- isomerase
[Clostridium botulinum BKT015925]
gi|329125790|gb|AEB75735.1| S-adenosylmethionine--tRNA-ribosyltransferase- isomerase
[Clostridium botulinum BKT015925]
Length = 341
Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV + D+ + N D +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDESRLMVVDRKSGHR---EHKIFKDILGYFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDKWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI K R Y
Sbjct: 111 -GSGELKAEVKGMGQDGSRIIEFEYEGI-FEEVLDRLGQMPLPPYITEKLDDKER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+K+ FVTLHVG GTF PVK ED ++H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTKELLKEIENKGVKIAFVTLHVGLGTFRPVKAEDIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K GG+I++VGTTS R LET E+G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETADIINETKENGGKIIAVGTTSCRTLETIGDENGKVRETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ YRF+S+GD L
Sbjct: 285 YKFKIVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVDEKYRFFSFGDAMFL 340
>gi|300856544|ref|YP_003781528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
ljungdahlii DSM 13528]
gi|300436659|gb|ADK16426.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
ljungdahlii DSM 13528]
Length = 344
Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +FDF LP IA P+ RD ARLMV+ I + D+ +LN D +V
Sbjct: 4 LKVTDFDFYLPEELIAQHPLMQRDEARLMVLDKKTG---DIEHKVFKDILDYLNPGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + E L R + ++W +P K K G F
Sbjct: 61 LNDTRVLPARLIGSKEGSGGKME----ILLLKRNADDTWETLVKPGKRAKVGSRFDF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 114 -GDGELKAEIVSVKEDGNRIVKFEYEGI-FEEVLDRLGQMPLPPYIKEK----LEDKEMY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ GIK+ F+TLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKEEGSAAAPTAGLHFTKELLKKIEDKGIKLAFLTLHVGLGTFRPVKVENIEEHNM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N + +GG I++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 228 HSEYYCMTKETADMINETREKGGSIIAVGTTSCRTLETIGDENGKVREQSGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STL+MLVSA CG E+ Y A+ YRF+S+GD L
Sbjct: 288 YKYKVVDKLITNFHLPQSTLIMLVSALCGREKILNAYNCAVKEKYRFFSFGDAMFL 343
>gi|154686913|ref|YP_001422074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens FZB42]
gi|166216699|sp|A7Z767|QUEA_BACA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154352764|gb|ABS74843.1| QueA [Bacillus amyloliquefaciens FZB42]
Length = 342
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ ++D ++ +F N D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLKERDASRLMVLDKQTGG---LTDSSFKEIVSFFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + ++W +P+K +KKG +L F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEENDTWETLVKPAKRVKKGTVLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ + G + F GI E SL G +PLPPYI K +D ++ Y
Sbjct: 111 -GDGRLTAVCTEELDHGGRKIEFRYDGIFYEVLESL-GEMPLPPYI--KEQLDDKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILDELKQKGVRIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA +LN V+ GGRIVSVGTTS R LET E DG SG+T+IFI P
Sbjct: 225 HAEFYEMTEETAASLNEVRKAGGRIVSVGTTSTRTLETIAGEHDGEFTASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E Y+HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRHAVEEEYRFFSFGDAMLI 341
>gi|77408883|ref|ZP_00785609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae COH1]
gi|77172522|gb|EAO75665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae COH1]
Length = 342
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF LP IA P+ RD+++L+V+ H N + DH++ +L DA+
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMTDSHFDHILDEL----KPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K ++ G+ + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGNRVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI
Sbjct: 224 MHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGHDFVLEAYNHAVEERYRFFSFGD 337
>gi|225870087|ref|YP_002746034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. equi 4047]
gi|225699491|emb|CAW93030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. equi 4047]
Length = 342
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 211/355 (59%), Gaps = 19/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RD ++L+++ H + DH++ L DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDRSKLLIIDHQEHTMTDSHFDHIIDQL----EPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEKM----ETHGHVELLLLKNIQGDQWEVLAKPAKRLKAGAQISF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+A VI + G ++ FS GI LE + +G +PLPPYI K R
Sbjct: 111 --GDGRLKARVIQELEHGGRIVEFSYDGIFLEI-LETLGEMPLPPYIHEKLADAER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNIDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ GGRI++VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYLLSEEAAQTLRKVKAAGGRIIAVGTTSIRTLETIGSKFQGQILADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAIDEHYRFFSFGDA 338
>gi|93278505|pdb|1YY3|A Chain A, Structure Of S-Adenosylmethionine:trna Ribosyltransferase-
Isomerase (Quea)
gi|93278506|pdb|1YY3|B Chain B, Structure Of S-Adenosylmethionine:trna Ribosyltransferase-
Isomerase (Quea)
Length = 346
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 212/352 (60%), Gaps = 17/352 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP IA P+ RD++RLMV+ + ++D + +F N D +V NNT+
Sbjct: 10 FDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFNEGDCLVLNNTR 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L G + ++ L + + + W A+P+K +KKG ++ F G R
Sbjct: 67 VLPARLFGTK----EDTGAKVELLLLKQETGDKWETLAKPAKRVKKGTVVTF----GDGR 118
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
L+A ++ G + F GI E SL G +PLPPYI K +D ++ YQT Y+
Sbjct: 119 LKAICTEELEHGGRKMEFQYDGIFYEVLESL-GEMPLPPYI--KEQLDDKER--YQTVYS 173
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV ++ ++H MH+E
Sbjct: 174 KEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEEHNMHAEFY 233
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRFR 304
+ TA ALN V+ GGRI+SVGTTS R LET E DG SG+T+IFI PGY F+
Sbjct: 234 QMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYPGYEFK 293
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 294 AIDGMITNFHLPKSSLIMLVSALAGRENILRAYNHAVEEEYRFFSFGDAMLI 345
>gi|25010872|ref|NP_735267.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae NEM316]
gi|77413595|ref|ZP_00789782.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 515]
gi|46577062|sp|Q8E611|QUEA_STRA3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|23095251|emb|CAD46461.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160361|gb|EAO71485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 515]
Length = 342
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF LP IA P+ RD+++L+V+ H N + DH++ +L DA+
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMTDSHFDHILDEL----KPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + I L + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI
Sbjct: 224 MHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGD 337
>gi|168208647|ref|ZP_02634272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens B str. ATCC 3626]
gi|170713009|gb|EDT25191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens B str. ATCC 3626]
Length = 341
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTGE---IEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGNRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|225025895|ref|ZP_03715087.1| hypothetical protein EUBHAL_00123 [Eubacterium hallii DSM 3353]
gi|224956792|gb|EEG38001.1| hypothetical protein EUBHAL_00123 [Eubacterium hallii DSM 3353]
Length = 342
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP IA P+ R S+RLMV++ I+ + D+ +L+ D +V
Sbjct: 2 MKTSDFNFDLPQELIAQDPLEDRSSSRLMVLNKESG---EIAHRIFHDITEYLHPGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K + G + F
Sbjct: 59 INDTKVIPARLIGTK----EDTGAHIEILLLKRKENDVWETLVKPGKKCRPGARVVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++D G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 112 -GNGELKAEIVDVLEDGNRLVHFEYEGI-FEEVLDRLGQMPLPPYITHK----LQDKNRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+ + VTLHVG GTF PVKVE+ +H M
Sbjct: 166 QTVYAKYEGSAAAPTAGLHFTKELLKQIEDMGVNIARVTLHVGLGTFRPVKVENVLEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N K GGRI++VGTTS R LE+ E+GII+P G T IFI PG
Sbjct: 226 HSEYYNVTETAAKMINDTKKNGGRIIAVGTTSTRTLESVADENGIIHPGCGNTEIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 286 YKFKAIDCLITNFHLPESTLLMLVSALAGKEHIMAAYKEAVKERYRFFSFGDAMFI 341
>gi|311069257|ref|YP_003974180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
atrophaeus 1942]
gi|310869774|gb|ADP33249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
atrophaeus 1942]
Length = 342
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF+LP IA P+ RD++RLMV+ + +SD ++ +F D +V
Sbjct: 1 MKVELFDFELPERLIAQVPLEQRDASRLMVLDKHTGG---LSDSSFKEIVSFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L GV+ ++ L + + + W +P+K +KKG +L F
Sbjct: 58 LNNTRVLPARLFGVK----EDTGAKVELLLLKQETGDRWETLVKPAKRVKKGTVLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G + F GI E SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGLLQAVCTEELEHGGRKVEFRYDGIFYEVLESL-GEMPLPPYI--KEQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV ++ ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILGELKEKGVRIEFITLHVGLGTFRPVSADEVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + A TA ALN V+ GGRIVSVGTTS R LET E +G SG+T+IFI P
Sbjct: 225 HAEFYEMSAETAAALNHVRETGGRIVSVGTTSTRTLETIAGENNGSFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLRAYNHAVEKEYRFFSFGDAMLI 341
>gi|110802898|ref|YP_699223.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens SM101]
gi|123047252|sp|Q0SRN4|QUEA_CLOPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110683399|gb|ABG86769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens SM101]
Length = 341
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTGE---IEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT +LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEDLLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|291546236|emb|CBL19344.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus sp. SR1/5]
Length = 341
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM H +L + H +D+ +L+ D +V
Sbjct: 1 MKTSDFYYDLPQELIAQDPLEDRSSSRLM--HLSLKDGSIEHRHF-TDILDYLHKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G H I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYG----HKEETGALIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGILKGEIIDIVDEGNRLIQFHYEGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTPELLEKVKEKGVNIAHVTLHVGLGTFRPVKVDDVEKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+A EDGI+ SG+T IFI PG
Sbjct: 225 HSEFYIVEEDQAKLINDTKKNGGRVISVGTTSCRTLESAAGEDGIVKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 YKFKAIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMMI 340
>gi|225181933|ref|ZP_03735367.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dethiobacter alkaliphilus AHT 1]
gi|225167373|gb|EEG76190.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dethiobacter alkaliphilus AHT 1]
Length = 342
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFD++LP IA P+ R+++RL+++H + SD+ + L + D +V
Sbjct: 1 MHLSEFDYELPEELIAQVPLTDREASRLLILHRKSGA---VEHGNFSDILSHLQAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + E L R W +P + ++ G + F
Sbjct: 58 LNDTKVLPARLTGRKKGGGAMAE----VLLLTRKDKACWEALVKPGRRLRPGAEVEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A + ++ G L+ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GNGELTAVIKEELADGTRLVEFRYDGI-FEEVLDRLGEMPLPPYITEKLA----DRQRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ GI V ++TLHVG GTF PVK ED +H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTPRLLAEAQDRGINVVYLTLHVGLGTFRPVKTEDIREHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +AQ LNS + GGRIV+VGTTS R+LET +DG IN SG+T+IFI PG
Sbjct: 225 HSEYYNISPESAQILNSCRRAGGRIVAVGTTSCRVLETVAQDDGTINAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ V+ L++NFHLPKSTL+M++SAF G + Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKTVNALLTNFHLPKSTLIMMISAFAGRDNVLNAYREAVQERYRFFSFGDAMLI 340
>gi|157826819|ref|YP_001495883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii OSU 85-389]
gi|166216747|sp|A8GVG9|QUEA_RICB8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157802123|gb|ABV78846.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii OSU 85-389]
Length = 353
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 224/375 (59%), Gaps = 39/375 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ RD + L++ S + ++ +L D +V
Sbjct: 1 MKLSDFDFDLPLELIAQNPISKRDESNLLIA----STQQYVKTKFY-NIIDYLKEGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---------------WSVYARP 105
FNN+KVI A+L+ +K I+ L+ R+ N WS +A+P
Sbjct: 56 FNNSKVIKAKLS---------LDKNITINLNQRLKDNRRATNDDAGRLKSIDYWSAFAKP 106
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
++ +K GD +F + + + +K GEI + F ++ I + + G +PLP Y
Sbjct: 107 ARKLKVGDEFYFDNH------KIIITEKLEMGEIKIKFELANISVFEFLDKYGEMPLPLY 160
Query: 166 IARKRPIDAR-DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
I KRP + D YQT Y+ IQGSVAAPTAGLHFT++++++L + G++V FVTLHVGA
Sbjct: 161 I--KRPERQKSDDERYQTVYSNIQGSVAAPTAGLHFTNDIINKLKAKGVQVAFVTLHVGA 218
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTFMPVK E+ ++H MH+E I TA +N K RI++VGTTSLR LE++ +G
Sbjct: 219 GTFMPVKTENINEHKMHTEYCSITPETAAIINKAKKEKRRIIAVGTTSLRTLESSGI-NG 277
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+N T+IFITPG++F+ VD+L++NFH PKSTL MLV AF G +E ++Y++AI
Sbjct: 278 NVNSGDFETDIFITPGFKFQIVDMLLTNFHFPKSTLFMLVCAFAGFKEMHELYKYAIEEQ 337
Query: 345 YRFYSYGDTSLLFQK 359
RF+SYGD +LL++K
Sbjct: 338 MRFFSYGDATLLYKK 352
>gi|312877417|ref|ZP_07737381.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor lactoaceticus 6A]
gi|311795806|gb|EFR12171.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor lactoaceticus 6A]
Length = 346
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 212/359 (59%), Gaps = 24/359 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ + I + ++ +LN D +V NN+
Sbjct: 8 DFHYDLPEELIAQKPVEPRDSSRLMVILPDGT----IEHRIFREIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K +KG F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI K +D D Y
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGV-FEEVLERLGKIPLPPYI--KEELD--DLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL R+ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLDRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E G + G+T+IFI PG
Sbjct: 228 HEEYYEISQDVADKINRAKEVGKRVIAVGTTSCRVLESCSDETGRVKAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YNFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|312128550|ref|YP_003993424.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor hydrothermalis 108]
gi|311778569|gb|ADQ08055.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor hydrothermalis 108]
Length = 346
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 211/359 (58%), Gaps = 24/359 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ + + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPDELIAQKPVEPRDSSRLMVILPDGR----LEHRIFRDIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K +KG F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ G ++ F G+ E + +G IPLPPYI K +D D Y
Sbjct: 113 GNGELKAEVLHVNQEEGTRIVRFYYEGV-FEEVLERLGKIPLPPYI--KEELD--DLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLEKISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A+ +N K G R+++VGTTS R+LE+ E+G + G+T+IFI PG
Sbjct: 228 HEEYYEISEDVAERINRAKELGKRVIAVGTTSCRVLESCCDENGKVRAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YEFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|308174473|ref|YP_003921178.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens DSM 7]
gi|307607337|emb|CBI43708.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens DSM 7]
gi|328554393|gb|AEB24885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens TA208]
gi|328912798|gb|AEB64394.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens LL3]
Length = 342
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ ++D ++ +F D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLKERDASRLMVLDKQTGG---LTDSSFKEIVSFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + ++W +P+K ++KG IL F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEENDTWETLVKPAKRVRKGTILTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ + G + F GI E SL G +PLPPYI K +D ++ Y
Sbjct: 111 -GDGRLTAVCTEELDHGGRKIKFRYDGIFYEVLESL-GEMPLPPYI--KEQLDDKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILDELKQKGVRIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA +LN V+ GGRIVSVGTTS R LET E DG+ SG+T+IFI P
Sbjct: 225 HAEFYEMTEETAASLNEVRKAGGRIVSVGTTSTRTLETIAGEHDGVFTASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E Y+HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRHAVEEEYRFFSFGDAMLI 341
>gi|18310928|ref|NP_562862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens str. 13]
gi|110799784|ref|YP_696626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens ATCC 13124]
gi|168204870|ref|ZP_02630875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens E str. JGS1987]
gi|168214133|ref|ZP_02639758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens CPE str. F4969]
gi|168215572|ref|ZP_02641197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens NCTC 8239]
gi|182624446|ref|ZP_02952230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens D str. JGS1721]
gi|21263867|sp|Q8XJ15|QUEA_CLOPE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123344605|sp|Q0TP14|QUEA_CLOP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|18145610|dbj|BAB81652.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens str. 13]
gi|110674431|gb|ABG83418.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens ATCC 13124]
gi|170663657|gb|EDT16340.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens E str. JGS1987]
gi|170714349|gb|EDT26531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens CPE str. F4969]
gi|177910449|gb|EDT72826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens D str. JGS1721]
gi|182382391|gb|EDT79870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens NCTC 8239]
Length = 341
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTGE---IEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|319744823|gb|EFV97162.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae ATCC 13813]
Length = 342
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF LP IA P+ RD+++L+V+ H N + DH++ +L DA+
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMADSHFDHILDEL----KPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LN+VK GGRI++VGTTS+R LET ++ +G + SG+TNIFI
Sbjct: 224 MHSEFYQLSKEAADTLNAVKESGGRIIAVGTTSIRTLETIGSKFNGELKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGD 337
>gi|331083879|ref|ZP_08332988.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 6_1_63FAA]
gi|330403304|gb|EGG82864.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 6_1_63FAA]
Length = 341
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISD--HLVSDLPAFLNSNDA 58
M +F +DLP IA P+ R S+RLM + + + +D H++ +LN D
Sbjct: 1 MRTADFYYDLPEELIAQDPLLDRSSSRLMHLDKQ-TGEICHTDFKHIID----YLNPEDC 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V N+T+VI A+L G + + I L R N W +P K K G + F
Sbjct: 56 LVINDTRVIPARLYGSKVG----TDAGIEILLLKRRENNIWETLVKPGKKAKPGTKISF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G L V+D G L+ F GI E + +G +PLPPYI K +D
Sbjct: 111 ---GDGLLIGEVLDIVEEGNRLIQFQYEGI-FEEILDKLGEMPLPPYITHK----LQDKE 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKV+D + H
Sbjct: 163 RYQTVYAKNEGSAAAPTAGLHFTKELLKEIEEKGVKIAHVTLHVGLGTFRPVKVDDVESH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE ++ A+ +N K++GGR++SVGTTS R LE+AT E+GI+ SG+T+IFI
Sbjct: 223 HMHSEFYVVEEEQAKIINETKAKGGRVISVGTTSCRTLESATDENGILQAKSGWTDIFIY 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ +D L++NFHLP+STLLMLVSA G E+ Y+ A+ YRF+S+GD ++
Sbjct: 283 PGYQFKMIDALITNFHLPESTLLMLVSALAGKEKIMNAYEEAVKERYRFFSFGDAMII 340
>gi|260587878|ref|ZP_05853791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Blautia
hansenii DSM 20583]
gi|260542143|gb|EEX22712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Blautia
hansenii DSM 20583]
Length = 355
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISD--HLVSDLPAFLNSNDA 58
M +F +DLP IA P+ R S+RLM + + + +D H++ +LN D
Sbjct: 15 MRTADFYYDLPEELIAQDPLLDRSSSRLMHLDKQ-TGEICHTDFKHIID----YLNPEDC 69
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V N+T+VI A+L G + + I L R N W +P K K G + F
Sbjct: 70 LVINDTRVIPARLYGSKVG----TDAGIEILLLKRRENNIWETLVKPGKKAKPGTKISF- 124
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G L V+D G L+ F GI E + +G +PLPPYI K +D
Sbjct: 125 ---GDGLLIGEVLDIVEEGNRLIQFQYEGI-FEEILDKLGEMPLPPYITHK----LQDKE 176
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKV+D + H
Sbjct: 177 RYQTVYAKNEGSAAAPTAGLHFTKELLKEIEEKGVKIAHVTLHVGLGTFRPVKVDDVESH 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE ++ A+ +N K++GGR++SVGTTS R LE+AT E+GI+ SG+T+IFI
Sbjct: 237 HMHSEFYVVEEEQAKIINETKAKGGRVISVGTTSCRTLESATDENGILQAKSGWTDIFIY 296
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ +D L++NFHLP+STLLMLVSA G E+ Y+ A+ YRF+S+GD ++
Sbjct: 297 PGYQFKMIDALITNFHLPESTLLMLVSALAGKEKIMNAYEEAVKERYRFFSFGDAMII 354
>gi|302389934|ref|YP_003825755.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermosediminibacter oceani DSM 16646]
gi|302200562|gb|ADL08132.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermosediminibacter oceani DSM 16646]
Length = 341
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F ++LP IA P+ RD++RLMVV + + + ++ +L D +V
Sbjct: 1 MDVKDFYYELPEELIAQEPLEKRDTSRLMVVKRDTR---IFEHRIFENITEYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ +I L R+ N+W V +P + + G + F
Sbjct: 58 LNDTRVMPARLLGVK----EDTGGKIEFVLLKRIKENTWEVLVKPGRRARIGSVFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V+D + G ++ F GI E+ + +G +P+PPYI + + +D Y
Sbjct: 111 -GDGRLRAKVLDFTDAGGRIVEFYYDGI-FEQVLDELGQMPVPPYIKK----ELKDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PVKV + ++H M
Sbjct: 165 QTVYARNPGSAAAPTAGLHFTEELLRKIEQNGVKICYITLHVGLGTFRPVKVRNIEEHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + + A+ +N K G R+++VGTTS R LET ++G + SG+T++FI PG
Sbjct: 225 HHEYFEVGSHAAETINRAKESGKRVIAVGTTSTRTLETVADQNGFVKSGSGWTDLFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD +++NFHLP+STLLMLVSAF G + Y+ AI YRFYS+GD L+
Sbjct: 285 YRFKVVDGMVTNFHLPESTLLMLVSAFAGRDLIMAAYREAIDKRYRFYSFGDAMLI 340
>gi|284052392|ref|ZP_06382602.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthrospira
platensis str. Paraca]
Length = 405
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 206/368 (55%), Gaps = 26/368 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ N
Sbjct: 45 LQGYDYELPPDRIAQNPVIPRDSSRLLVV----DSPQSHQHRLFRDLPDLLQPQDLLILN 100
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + R I L +PN W +P K K GD L F S+ G
Sbjct: 101 NTRVLPARLYGRK-----SRSAAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFQSKSG 155
Query: 123 QSRLEATVID-KWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATVID +TG LL F + G L + G IP PPY+ + + + Y
Sbjct: 156 GEILYATVIDTNPSTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVTDSQALAEQ----Y 211
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHFT L RL I FVTLHVG GTF PV+VED H M
Sbjct: 212 QTIYGDRPGAVAAPTAGLHFTEQLFQRLSQQHIDHAFVTLHVGLGTFRPVEVEDITTHQM 271
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNIF 296
H+E + T + +N ++RGGRI++VGTT +R LE + D I P+ G N+F
Sbjct: 272 HAEWVELPPETVEKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSGDRSIQPYCGEINLF 331
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA-------YRFYS 349
I PGYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ YRFYS
Sbjct: 332 IYPGYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYS 391
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 392 FGDAMLIL 399
>gi|167766704|ref|ZP_02438757.1| hypothetical protein CLOSS21_01210 [Clostridium sp. SS2/1]
gi|317497532|ref|ZP_07955851.1| tRNA ribosyltransferase-isomerase [Lachnospiraceae bacterium
5_1_63FAA]
gi|167711641|gb|EDS22220.1| hypothetical protein CLOSS21_01210 [Clostridium sp. SS2/1]
gi|316895215|gb|EFV17378.1| tRNA ribosyltransferase-isomerase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 342
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R S+RL+ + N I + ++ +L D +V
Sbjct: 1 MKVSDFTFDLPEELIAQDPLEDRSSSRLLTLDKNTGE---IGHDVFHNIVNYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + ++ L R N W +P K + G + F
Sbjct: 58 LNNTKVIPARLIGAK----EETGGKVEVLLLKRKQDNVWETLVKPGKKARPGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L VID + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGKLVGEVIDVVDEGNRLVKFEYEGI-FEEVLDELGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+ + +VTLHVG GTF PVKV+D +H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQIKDMGVNIAYVTLHVGLGTFRPVKVDDVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N K GGR++SVGTTS R LE+ EDG ++ SG+T+IFI PG
Sbjct: 225 HSEFYRIEEEDAELINETKKNGGRVISVGTTSTRTLESVAEEDGTLHAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSA G E Y A+ YRF+S+GD +
Sbjct: 285 YKFKVIDGLITNFHLPESTLLMLVSALAGREHILNAYNIAVKERYRFFSFGDAMFI 340
>gi|291566847|dbj|BAI89119.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthrospira
platensis NIES-39]
Length = 441
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 206/368 (55%), Gaps = 26/368 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ N
Sbjct: 81 LQGYDYELPPDRIAQNPVIPRDSSRLLVV----DSPQSHQHRLFRDLPDLLQPQDLLILN 136
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + R I L +PN W +P K K GD L F S+ G
Sbjct: 137 NTRVLPARLYGRK-----SRSAAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFQSKSG 191
Query: 123 QSRLEATVID-KWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATVID +TG LL F + G L + G IP PPY+ + + + Y
Sbjct: 192 GEILYATVIDTNPSTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVTDSQALAEQ----Y 247
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHFT L RL I FVTLHVG GTF PV+VED H M
Sbjct: 248 QTIYGDRPGAVAAPTAGLHFTEQLFQRLSQQHIDHAFVTLHVGLGTFRPVEVEDITTHQM 307
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNIF 296
H+E + T + +N ++RGGRI++VGTT +R LE + D I P+ G N+F
Sbjct: 308 HAEWVELPPETVEKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSGDRSIQPYCGEINLF 367
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA-------YRFYS 349
I PGYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ YRFYS
Sbjct: 368 IYPGYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYS 427
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 428 FGDAMLIL 435
>gi|169343759|ref|ZP_02864758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens C str. JGS1495]
gi|169298319|gb|EDS80409.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens C str. JGS1495]
Length = 341
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTGE---IEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEVGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|302870943|ref|YP_003839579.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor obsidiansis OB47]
gi|302573802|gb|ADL41593.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor obsidiansis OB47]
Length = 346
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 210/359 (58%), Gaps = 24/359 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRD++RLMV+ P+ + I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPDELIAQKPVEPRDNSRLMVILPDGT----IEHRIFRDIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K ++G F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARRGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI + D Y
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGV-FEEVLEKLGKIPLPPYIKE----ELEDLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLEKISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E G + G+TNIFI PG
Sbjct: 228 HEEYYEISQDVADRINRAKELGKRVIAVGTTSCRVLESCSDEAGRVKAQKGWTNIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YNFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|312134251|ref|YP_004001589.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor owensensis OL]
gi|311774302|gb|ADQ03789.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor owensensis OL]
Length = 345
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 210/358 (58%), Gaps = 24/358 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ + I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPDELIAQKPVEPRDSSRLMVILPDGT----IEHRIFRDIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K ++G F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARRGRKFIF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI + D Y
Sbjct: 113 GNGELKAKVLHVNQDEGTRIVRFYYEGV-FEEVLEKLGKIPLPPYIKE----ELEDLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLKKIEEKGVEILYVTLHVGLGTFKPVKVENIEEHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E+G + G+T+IFI PG
Sbjct: 228 HDEYYEISQEVADRINKAKEFGKRVIAVGTTSCRVLESCSDENGRLKAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ +
Sbjct: 288 YEFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVEMKYRFFSFGDAMLILR 345
>gi|326791986|ref|YP_004309807.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
lentocellum DSM 5427]
gi|326542750|gb|ADZ84609.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
lentocellum DSM 5427]
Length = 340
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F LP +IA P+ R ++RLMV+ I D+ A+L D +V
Sbjct: 1 MKTSDFYFHLPEEQIAQVPLKDRTTSRLMVLDQKTG---EIEHKHFYDIKAYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R ++ L R W V +P K K GD + F
Sbjct: 58 LNDTRVIPARLFGARPSG-----GKVEFLLLTRKEEKRWEVLVKPGKKAKIGDEIIF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V + G+ ++ F GI E + +G +PLPPYI K D Y
Sbjct: 110 -GEGLLKAKVEEIIEDGKRIVRFEYEGI-FEEVLDALGEMPLPPYIHEK----LEDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + +G+K+ +VTLHVG GTF PVKVED +H M
Sbjct: 164 QTVYSKHEGSAAAPTAGLHFTKELLKEIEEMGVKIAYVTLHVGLGTFRPVKVEDVLNHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N VK+ GGR+++VGTTS R LE+ E G+I SG+TNIFI PG
Sbjct: 224 HSEYYSIDEENATIINKVKAEGGRVIAVGTTSTRTLESNADEKGLIKAGSGWTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ V+ L++NFHLP+STL+MLVSA G E Y A++ YRF+S+GD L+
Sbjct: 284 YTFKCVEELITNFHLPESTLIMLVSALAGKEAILNAYNTAVNEGYRFFSFGDAMLI 339
>gi|238926810|ref|ZP_04658570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Selenomonas flueggei ATCC 43531]
gi|238885342|gb|EEQ48980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Selenomonas flueggei ATCC 43531]
Length = 343
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 215/360 (59%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP +IA P PRDS+R+MV+ P I L +L D ++
Sbjct: 1 MNISDFDYFLPEEQIAQVPADPRDSSRMMVLSPKTQS---IEHRHFYQLDEYLTDGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GVR + E L ++ + W V +P K ++ G ++ F +
Sbjct: 58 FNDTRVIPARLIGVRQPTGGKAE----VFLLRQLERDRWEVLVKPGKKMRVGSVITFGHE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+ + G ++ FS GI E + +GT+PLPPYI D Y
Sbjct: 114 -----LSCEVLAYTDFGGRIVKFSYEGI-FEEILDRLGTMPLPPYIHET----LEDPERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT +L+ RL G+ + FVTLHVG GTF PV+V++ +DH+M
Sbjct: 164 QTIYSREKGSAAAPTAGLHFTESLMDRLRKKGVHLGFVTLHVGLGTFRPVQVDEIEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA + K G R+V+VGTTS+R LE+A + G+I G TNIFI PG
Sbjct: 224 HSEFYSIPTETADLIRMAKQEGRRVVAVGTTSIRTLESAAVDHGMIEEKRGQTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F+ VD +++NFHLPKSTL+MLVSAF G E T + Y+ A+ YRF+S+GD ++L Q R
Sbjct: 284 YQFKIVDAVITNFHLPKSTLIMLVSAFAGREFTLQAYRTAVEENYRFFSFGD-AMLIQSR 342
>gi|70726282|ref|YP_253196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus haemolyticus JCSC1435]
gi|91207406|sp|Q4L6Y5|QUEA_STAHJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|68447006|dbj|BAE04590.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
haemolyticus JCSC1435]
Length = 341
Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+DLP S IA P+ RD +RL+V+ N I D+ +L + D +V
Sbjct: 1 MNVEEFDYDLPESLIAQTPLKDRDQSRLLVLGRNSGN---IEHKHFKDVINYLETGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + R+ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTRIENNDWEVLLKPAKRIKVGNKLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I++ + G ++ GI LE +++ +G +PLPPYI K +D D Y
Sbjct: 111 -GEGKIIAECIEELDQGGRIMRLHYEGI-LEERLNELGEMPLPPYI--KERLDDPDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + GI + F+TLHVG GTF PV VED +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLDEIRAKGINIAFITLHVGLGTFRPVSVEDINDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETANLLNQTKKEGHRIISVGTTSTRTLETIRRDYNEFVAVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++A+D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+
Sbjct: 285 FTYKAIDGLITNFHLPKSTLVMLVSAFSSRENILNAYKEAVKLEYRFFSFGDAMLI 340
>gi|299822808|ref|ZP_07054694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
grayi DSM 20601]
gi|299816337|gb|EFI83575.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
grayi DSM 20601]
Length = 342
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 212/353 (60%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R ++RLMV++ I D + + +L DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTASRLMVLNKETGA---IDDKHFASIVDYLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G++ + I L + + N W +P+K I+ G + F
Sbjct: 58 LNNTRVLPARLHGLK----DETGAHIEVLLLKQKADNEWETLVKPAKRIRVGQTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G +L F GI E + +G +PLPPYI + R Y
Sbjct: 111 -GNGELKAVCKEELEHGGRILEFHYEGIFYE-VLENLGEMPLPPYIKEQLEDQGR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+KV F+TLHVG GTF PV V DTD+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEALLDQIREKGVKVIFLTLHVGLGTFRPVDVADTDNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A L+ VK+ G RI++VGTTS+R LET A+ +G + SG+T+IFI+P
Sbjct: 225 HSEFYRLTKEAAAELSEVKAAGKRIIAVGTTSIRTLETIASRNNGALVEESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
G+ F+AVD L++NFHLPKSTL+MLVSA + Y+HA+ + YRF+S+GD
Sbjct: 285 GFTFQAVDALITNFHLPKSTLIMLVSALSNRDIILHAYRHAVENRYRFFSFGD 337
>gi|225868906|ref|YP_002744854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. zooepidemicus]
gi|225702182|emb|CAW99893.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. zooepidemicus]
Length = 342
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 210/355 (59%), Gaps = 19/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RD ++L+++ H + DH++ L DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDRSKLLIIDHQEHTMTDSHFDHIIDQL----EPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEKM----ETHGHVELLLLKNIQGDQWEVLAKPAKRLKAGAQISF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L+A VI + G ++ FS GI LE + +G +PLPPYI K R
Sbjct: 111 --GDGLLKARVIQELEHGGRIVEFSYDGIFLEI-LETLGEMPLPPYIHEKLADAER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNIDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ GGRIV+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYLLSEEAAQTLRKVKAAGGRIVAVGTTSIRTLETIGSKFQGQILADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAIDEHYRFFSFGDA 338
>gi|113869066|ref|YP_727555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
eutropha H16]
gi|123133638|sp|Q0K734|QUEA_RALEH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113527842|emb|CAJ94187.1| queuosine biosynthesis protein [Ralstonia eutropha H16]
Length = 352
Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 161/366 (43%), Positives = 218/366 (59%), Gaps = 25/366 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH----PNLSCPLVISDHLVSDLPAFLNSN 56
+ + +FDF LPP IA + R ++RL+VV + + + + D SD+ +L +
Sbjct: 2 LTLSDFDFPLPPELIAQSALPDRSASRLLVVERLAPADTADAVRMVDRAFSDIVDYLRPD 61
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+VI A RF +I + V ++ R SK +G ILH
Sbjct: 62 DLLVFNDTRVIKA-----RFFGHKPSGGKIEVLVERVVDSHTVLAQVRASKTPTEGSILH 116
Query: 117 FFSQDGQSRLEATV---IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
DG TV +D++ T L F ++L I G +PLPPYI R P D
Sbjct: 117 L--ADGA--FAVTVGPRVDQFFT----LRFPEPALDL---IERYGRLPLPPYI-RHDP-D 163
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT YA+ G+VAAPTAGLHF L +RL + G++ F+TLHVGAGTF PV+ E
Sbjct: 164 AYDETRYQTVYARSPGAVAAPTAGLHFDDALFARLNAAGVRRAFLTLHVGAGTFQPVRTE 223
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE + A AQA+ ++RGGR+++VGTTSLR LE+A DG + SG T
Sbjct: 224 NLAEHKMHSEWYAVSADLAQAVRDTRARGGRVIAVGTTSLRALESAAQADGTLAAGSGDT 283
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPGYRFR VD L++NFHLPKSTLLMLVSA G+E + Y+HA+ YRF+SYGD
Sbjct: 284 DIFITPGYRFRLVDALITNFHLPKSTLLMLVSALAGVEAIRAAYRHAVEQRYRFFSYGDA 343
Query: 354 SLLFQK 359
LL ++
Sbjct: 344 MLLTRQ 349
>gi|91205719|ref|YP_538074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii RML369-C]
gi|122425478|sp|Q1RI29|QUEA_RICBR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91069263|gb|ABE04985.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii RML369-C]
Length = 353
Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 224/375 (59%), Gaps = 39/375 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ RD + L++ S + ++ +L D +V
Sbjct: 1 MKLSDFDFDLPLELIAQNPISKRDESNLLIA----STQQYVKTKFY-NIIDYLKEGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---------------WSVYARP 105
FNN+KVI A+L+ +K I+ L+ R+ N WS +A+P
Sbjct: 56 FNNSKVIKAKLS---------LDKNITINLNQRLKDNRRATNDDAGRLKSIDYWSAFAKP 106
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
++ +K GD +F + + + +K GEI + F ++ I + + G +PLP Y
Sbjct: 107 ARKLKVGDEFYFDNH------KIIITEKLEMGEIKIKFELANISVFEFLDKYGEMPLPLY 160
Query: 166 IARKRPIDAR-DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
I KRP + D YQT Y+ IQGSVAAPTAGLHFT++++++L + G++V FVTLHVGA
Sbjct: 161 I--KRPERQKSDDERYQTVYSNIQGSVAAPTAGLHFTNDIINKLKAKGVQVAFVTLHVGA 218
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTFMPVK E+ ++H MH+E I TA +N K RI++VGTTSLR LE++ +G
Sbjct: 219 GTFMPVKTENINEHKMHTEYCSITPETAAIINKAKKEKRRIIAVGTTSLRTLESSGI-NG 277
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+N T+IFITPG++F+ VD+L++NFH PKSTL MLV AF G ++ ++Y++AI
Sbjct: 278 NVNSGDFETDIFITPGFKFQIVDMLLTNFHFPKSTLFMLVCAFAGFKKMHELYKYAIEEQ 337
Query: 345 YRFYSYGDTSLLFQK 359
RF+SYGD +LL++K
Sbjct: 338 MRFFSYGDATLLYRK 352
>gi|261381310|ref|ZP_05985883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
subflava NJ9703]
gi|284795799|gb|EFC51146.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
subflava NJ9703]
Length = 342
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 211/357 (59%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 1 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALPTLP----IEDKHFGDLPDYVAPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKASG-----GKIEALIERVLDAHTALAHIRSSKSPKPGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + A ++++ E L G + + + G +PLPPYI +R D D
Sbjct: 109 --EGDIRAVMMER---AEELFCLKFEGEQTVYELLEQNGHLPLPPYI--ERVADDEDDSR 161
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H
Sbjct: 162 YQTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHK 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITP
Sbjct: 222 MHSEWFDVPAETVAAIEAAKARGNKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRF D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ YRF+SYGD +L
Sbjct: 282 GYRFNVADRLITNFHLPKSTLLMLVSAFSGMEHIRSVYRHAVEQEYRFFSYGDAMIL 338
>gi|153955757|ref|YP_001396522.1| hypothetical protein CKL_3143 [Clostridium kluyveri DSM 555]
gi|219856124|ref|YP_002473246.1| hypothetical protein CKR_2781 [Clostridium kluyveri NBRC 12016]
gi|189038515|sp|A5N205|QUEA_CLOK5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764273|sp|B9E5Q7|QUEA_CLOK1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146348615|gb|EDK35151.1| QueA [Clostridium kluyveri DSM 555]
gi|219569848|dbj|BAH07832.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 341
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 209/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA +P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 1 MEVTDFDFYLPEELIAQKPLEQRDEGRLMVLDKKTGK---VCHKIFKDIVYYLNPGDCVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GVR + + I L R +W +P + K G+ +F
Sbjct: 58 LNDTRVLPARLIGVREDTMGK----IEFLLLKRRDNFTWETLVKPGRRAKVGNRFNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A V+ G ++ F +G+ E + +G IPLPPYI K ++ ++ Y
Sbjct: 111 -GSGQLKAEVVSINEDGNRIVRFEYNGV-FEEILDKLGQIPLPPYIKEK--LENKEL--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL L G+ + F+TLHVG GTF PVKVE+ +DH M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLRELREKGVNLAFLTLHVGLGTFRPVKVENIEDHAM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G ++SVGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEFYSMSKETADMINAAKESGHSVISVGTTSCRTLETIGDENGRVKEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLPKSTL+MLVSAF G E T Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDKLITNFHLPKSTLIMLVSAFYGRENTLHAYNVAVKEKYRFFSFGDAMFI 340
>gi|28378877|ref|NP_785769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum WCFS1]
gi|254557082|ref|YP_003063499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum JDM1]
gi|300768017|ref|ZP_07077923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308181076|ref|YP_003925204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum subsp. plantarum ST-III]
gi|38258031|sp|Q88V04|QUEA_LACPL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|28271714|emb|CAD64620.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum WCFS1]
gi|254046009|gb|ACT62802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum JDM1]
gi|300494366|gb|EFK29528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308046567|gb|ADN99110.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum subsp. plantarum ST-III]
Length = 344
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++FD+DLP IA P+ RDS+RL+ + + D D+ LN DA+V
Sbjct: 3 LTLEDFDYDLPHELIAQTPIKKRDSSRLLELDRQTGE---MQDKHFYDIIDQLNPGDAVV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A+L GV+ E L + W +P+K K G ++ F
Sbjct: 60 MNNSRVMPARLYGVKPETGGHAE----VLLLHNTEGDEWETLMKPAKRAKVGTVISF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L ATV + G ++ F GI +E SL G PLPPYI K +D D Y
Sbjct: 113 -GDGKLTATVTAEKEDGIRMIEFHYDGIFMEILESL-GETPLPPYIKEK--LDDPDR--Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLH+T LL ++ GIK+ ++TLHVG GTF PV+ ++ DDH M
Sbjct: 167 QTVYAKENGSAAAPTAGLHWTKELLQKVQDKGIKLVYLTLHVGLGTFRPVEEDNIDDHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE +D A+ LN V+ GGRI++ GTTS+R LET ++ DG I P SG+T+IFI P
Sbjct: 227 HSEFYRLDEDAAKTLNEVRQNGGRIIATGTTSIRTLETIGSKFDGEIKPDSGWTDIFIKP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ VD ++NFHLPKSTL+MLV+AF G + K YQHAI YRF+S+GD +
Sbjct: 287 GYQWKVVDAFITNFHLPKSTLVMLVAAFTGRDMILKAYQHAIDEKYRFFSFGDAMFI 343
>gi|197121715|ref|YP_002133666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaeromyxobacter sp. K]
gi|238689888|sp|B4UID2|QUEA_ANASK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196171564|gb|ACG72537.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter sp. K]
Length = 345
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 209/359 (58%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P + +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPGEGAP---AHRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + C W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS--GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLTF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG LEA V G + G ELE + G IPLPPYI +R DA D Y
Sbjct: 113 DG---LEARVDGVEGEGFYRVTLDRQGPELEAALGRAGRIPLPPYI--RRAPDAEDAARY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT LL+RL + GI+ VTLHVG GTF+P++ +D D H M
Sbjct: 168 QTIWARAPGSAAAPTAGLHFTEPLLARLAARGIRRTAVTLHVGPGTFLPIRGDDLDLHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ L + ++RGGRIV+VGTTS+R LE+A DG + G T +FI PG
Sbjct: 228 HGERYEVSPAAAEELAATRARGGRIVAVGTTSVRTLESA-WRDGAVAAGPGRTELFIRPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ F AVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD L+ ++
Sbjct: 287 HPFHAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLVLRR 345
>gi|209527446|ref|ZP_03275951.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Arthrospira
maxima CS-328]
gi|209492119|gb|EDZ92469.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Arthrospira
maxima CS-328]
Length = 375
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 205/368 (55%), Gaps = 26/368 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ N
Sbjct: 15 LQGYDYELPPDRIAQNPVIPRDSSRLLVV----DSPPSHQHRLFRDLPDLLQPEDLLILN 70
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + I L +PN W +P K K GD L F S+ G
Sbjct: 71 NTRVLPARLYGRKST-----SAAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFPSKSG 125
Query: 123 QSRLEATVID-KWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L ATVID TG LL F + G L + G IP PPY+ + + + Y
Sbjct: 126 REILYATVIDTNPGTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVTDSQAVAEQ----Y 181
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHFT L RL I F+TLHVG GTF PV+VED H M
Sbjct: 182 QTIYGTRPGAVAAPTAGLHFTEELFQRLSDHHIDHAFLTLHVGLGTFRPVEVEDITTHQM 241
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNIF 296
H+E + T +N ++RGGRI++VGTT +R LE + DG I P+ G N+F
Sbjct: 242 HAEWVELRPETVDKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSLDGCIQPYCGEINLF 301
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA-------YRFYS 349
I PGYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ YRFYS
Sbjct: 302 IYPGYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYS 361
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 362 FGDAMLIL 369
>gi|188586408|ref|YP_001917953.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|229892797|sp|B2A5L1|QUEA_NATTJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|179351095|gb|ACB85365.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 343
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 208/356 (58%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EF+++LP IA +P+ R +RLMVV N S V +H LP ++ D V
Sbjct: 1 MKLEEFNYELPEELIAQKPLANRSKSRLMVVSINSSD--VQHNHF-EKLPQYVKDGDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + + E LH + W V +P K K G++ F
Sbjct: 58 INNSRVIPARLFGNKKQTGGKLE---MVLLHPLEGKDEWEVLVKPGKRAKPGNVFEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ LEA ++D G + F G ++ + +G +PLPPYI + D Y
Sbjct: 112 -GQETLEAEILDITPEGSRRVKFYYQG-NFQQVLDQLGQMPLPPYIKE----ELEDPERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT ++S + G +V +TLHVG GTF PV+ + ++H M
Sbjct: 166 QTVYAKESGSVAAPTAGLHFTPEIISDIKDQGGEVAELTLHVGLGTFRPVETPNIEEHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA+ +N K RG R+++VGTT +R LET T+DG++ P G+T+IFI PG
Sbjct: 226 HAEYYQLPEETAKKINQAKQRGNRVIAVGTTVVRTLETVKTDDGLVQPGKGWTDIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD +++NFHLPKSTLLMLVSAF G + YQ AI YRF+S+GD +
Sbjct: 286 YEFKVVDAMLTNFHLPKSTLLMLVSAFAGKDLIMSAYQAAIEERYRFFSFGDAMFI 341
>gi|194017396|ref|ZP_03056008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus ATCC 7061]
gi|194011264|gb|EDW20834.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus ATCC 7061]
Length = 342
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FDFDLP IA P+ RD++RLMV++ I S + + + D +V
Sbjct: 1 MKLELFDFDLPERLIAQVPLEKRDASRLMVLNKQTGA---IKHDTFSQITDYFQTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ ++ L + + W +P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGMK----EDTGAKVELLLLKQEEGDKWETLVKPAKRVKKGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F +GI E SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLQAVCTEELEHGGRKVEFQYTGIFYEVLESL-GEMPLPPYI--KEQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYSKEVGSAAAPTAGLHFTNELLDALKEKGVHIAFITLHVGLGTFRPVSADRIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E ++ TA LN V+ GGRI+SVGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HAEFYEMNEETAAELNRVRKEGGRIISVGTTSTRTLETIASAHDGEFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E K Y A+ YRF+S+GD L+
Sbjct: 285 GYTFKAIDGMITNFHLPKSSLIMLVSALAGREHVLKAYNEAVKEEYRFFSFGDAMLI 341
>gi|23099489|ref|NP_692955.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Oceanobacillus iheyensis HTE831]
gi|38372491|sp|Q8EPQ8|QUEA_OCEIH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|22777718|dbj|BAC13990.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Oceanobacillus iheyensis HTE831]
Length = 342
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 212/358 (59%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF LP IA P+ R S+RL V+ S I+ D+ +L + D +V
Sbjct: 1 MQIEDFDFHLPEELIAQTPLKDRTSSRLCVLDKQTS---EITHRSFKDITTYLQAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ + +I L + ++W V +P+K +K G + F
Sbjct: 58 LNDTKVLPARLYGVK----SDTGAKIEVLLLHQQEEDTWEVLVKPAKKVKVGTEIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+AT ID + G ++ FS +GI E + +G +PLPPYI + P R Y
Sbjct: 111 -GNGKLKATCIDLKDHGGRIMTFSYTGIFYE-ILDQLGEMPLPPYIKEQLPEQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + ++G+ + FVTLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTDKLLEDIKAMGVNIVFVTLHVGLGTFRPVSVDSVEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN K+ G RI+SVGTTS R LET + DG G+T+IFI P
Sbjct: 225 HSEFYSMSESAAKTLNEAKAAGRRIISVGTTSTRTLETIVRDHDGKFVATRGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+FRA+D L++NFHLPKSTL+M++SA G E Y A+ YRF+S+GD L+
Sbjct: 285 PYKFRAIDGLITNFHLPKSTLIMMISALAGKEAILHAYNEAVKEEYRFFSFGDAMLIL 342
>gi|220932067|ref|YP_002508975.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halothermothrix orenii H 168]
gi|254764280|sp|B8CXG1|QUEA_HALOH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219993377|gb|ACL69980.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halothermothrix orenii H 168]
Length = 341
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD++LP IA +P+ RD +RLMV+H I + + ++ FL D +V
Sbjct: 1 MKVEEFDYELPEELIAQKPLPNRDDSRLMVLHRKTGE---IEETVFKNIIKFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + R I L ++ W V RP + +KKG+ + F
Sbjct: 58 LNDTKVIPARLFGEKIPSGTR----IEVLLLKSITEGLWEVLVRPGRRMKKGNRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V D + G ++ F G + ++ I +G +PLPPYI RK D Y
Sbjct: 111 -GDGKLVGIVKDYTDFGGRIMQFEYDG-DFDKVIEELGEMPLPPYITRK----VEDKGRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHFT LL ++ GI + ++TLHVG GTF PV+ E+ +DH M
Sbjct: 165 QTVYARKKGSVAAPTAGLHFTDRLLKKIKEQGIGIIYLTLHVGLGTFRPVRAENVEDHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + K +G ++++VGTT R LE+A E + G+T+IFI PG
Sbjct: 225 HSEYFEVSTDVVNRIKETKEKGKKVIAVGTTVTRALESAAVEKRHLKAMRGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLPKSTLLMLVSAF G + Y+ AI + YRF+S+GD L+
Sbjct: 285 YNFKVIDGLITNFHLPKSTLLMLVSAFAGKDMVMSAYKLAIKNKYRFFSFGDAMLIL 341
>gi|260583655|ref|ZP_05851403.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella elegans ATCC 700633]
gi|260158281|gb|EEW93349.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella elegans ATCC 700633]
Length = 345
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 214/361 (59%), Gaps = 27/361 (7%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++FDFDLP +IA P+ R S+RL+VV+ + D S++ +L D +V NN
Sbjct: 6 QDFDFDLPEEQIAQTPLKDRTSSRLLVVNETEHS---VEDKHFSEIIDYLEEGDILVVNN 62
Query: 64 TKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
T+V+ A+L G EKE I L + W +P+K +K G ++ F
Sbjct: 63 TRVLPARLYG---------EKEGTGAHIEVLLLHNTHGDCWETLVKPAKRMKVGTVVSF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL+ATV ++ G ++ F G+ LE SL G +PLPPYI K +D D
Sbjct: 113 ---GDGRLKATVTEELEQGGRIIEFQYDGVFLEILESL-GEMPLPPYI--KERLD--DQE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT L+ ++ GI++ +TLHVG GTF PV V+ +DH
Sbjct: 165 RYQTVYAKENGSAAAPTAGLHFTKELMEKIQQKGIQIVPITLHVGLGTFRPVSVDHLEDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFI 297
MHSE I TA+ + K G R+++VGTTS+R LET + G I P SG+T+IFI
Sbjct: 225 KMHSEYYHISKETAEVIAETKKNGKRVIAVGTTSIRTLETVGSANQGEIVPSSGWTDIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+PGY F+ VD ++NFHLPKSTL+MLVSA+ G + T + Y HAI YRF+S+GD ++
Sbjct: 285 SPGYEFKVVDAFITNFHLPKSTLVMLVSAYLGRDFTLEAYHHAIRERYRFFSFGDAMFVY 344
Query: 358 Q 358
+
Sbjct: 345 R 345
>gi|306821137|ref|ZP_07454753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
gi|304550830|gb|EFM38805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
Length = 344
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 215/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +EF +DLP IA P+ R S++L++++ + ++ +L+ ND +V
Sbjct: 1 MKTEEFFYDLPERLIAQTPLKDRSSSKLLLLNKESGN---TKHEIFKNIIDYLDKNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L G++ + L R S W V +P+K +KKG + F
Sbjct: 58 FNNTRVLPARLYGLK----KDTGANVEILLLKRYSMKKWQVLVKPAKRLKKGSTVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L T++++++ G + FS G+ E IS +G +PLPPYI K +D Y
Sbjct: 111 -GEDLLLMTILEEYDEGIRDVEFSYEGV-FEDIISQIGFMPLPPYIKEK----LQDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT L++ L G+++ ++TLHVG GTF PVK E+ DH+M
Sbjct: 165 QTIYSKINGSSAAPTAGLHFTKELIASLEEKGVQIEYLTLHVGLGTFRPVKAEEVTDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID TAQ LN K G +I++VGTT++R LE+A D I+ T+IFI P
Sbjct: 225 HSEHYVIDEDTAQRLNKAKKEGKKIIAVGTTTVRTLESAVNRDNILEKLEDDTSIFIYPP 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD +++NFHLP+STL+M++SAF G ++ Y+ AI + YRF+S+GD+ +
Sbjct: 285 YDFKFVDSIITNFHLPQSTLIMMISAFAGKDKVFNAYKVAIENEYRFFSFGDSMFI 340
>gi|298244051|ref|ZP_06967858.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Ktedonobacter racemifer DSM 44963]
gi|297557105|gb|EFH90969.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Ktedonobacter racemifer DSM 44963]
Length = 379
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 221/371 (59%), Gaps = 22/371 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LP IA P+ PRDS+RL+VV ++ D+ +L D ++
Sbjct: 17 LKISDFDYHLPNELIAQTPIEPRDSSRLLVVKRQDET---LAHQHFRDIEEYLQPGDLLI 73
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N ++VI A+L G R E + + ++W RP + +++G + F ++
Sbjct: 74 ANQSRVIPARLLGKRAESGGAVEV-LLLAERSDLGQDTWEALVRPGRRLREGARIFFGAE 132
Query: 121 -DGQSRLEATVIDKWNTGEILLVFSISGIELERQ------------ISLVGTIPLPPYIA 167
+ Q+RL ++++ G ++ F + G ERQ I +G +PLPPYI
Sbjct: 133 TEEQARLIGEILERTEAGGRVVRFHVPGRSQERQNDPYALLDVRQVIDEIGKMPLPPYI- 191
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
+D D YQT YA+I+GS AAPTAGLHFT LL RL + G++ FVTLHVG TF
Sbjct: 192 -HETLD--DPERYQTVYARIRGSAAAPTAGLHFTPQLLERLRARGVRTGFVTLHVGLDTF 248
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGII 286
PV+ ED +H MHSE +D TA +N ++RGGR+V+VGTTS+R+LE+ A+ +G I
Sbjct: 249 RPVESEDVREHKMHSEEIELDETTAALINETRARGGRVVAVGTTSVRVLESVASLHEGRI 308
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P+ G T +FITPGYR++AVD L++NFHLP+STLL+LVSAF ++ YQ AI+ YR
Sbjct: 309 VPYKGHTRLFITPGYRYQAVDALITNFHLPRSTLLLLVSAFMTKPLMERAYQEAITERYR 368
Query: 347 FYSYGDTSLLF 357
F+S+GD L+
Sbjct: 369 FFSFGDAMLIL 379
>gi|315221824|ref|ZP_07863736.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus F0211]
gi|315189057|gb|EFU22760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus F0211]
Length = 342
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 211/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV+ + D + LN DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVNHETGQ---MEDTHFDAIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L ++ + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----PETGGHVELLLLKNIAGDDWEVLAKPAKRLKVGAAISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G + F GI LE SL G +PLPPYI K +D Y
Sbjct: 111 -GDGRLTATVLEELEHGGRTVRFHYQGIFLEVLESL-GEMPLPPYIHEK----LKDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAANTLRQVKASGHRVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLSAYQHAIDEKYRFFSFGD 337
>gi|255066143|ref|ZP_05317998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sicca ATCC 29256]
gi|255049688|gb|EET45152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sicca ATCC 29256]
Length = 343
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 215/361 (59%), Gaps = 28/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPDQLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYIEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKE----ISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FNNTKV+ A+L G EKE I + + ++ + R SK K G L
Sbjct: 57 FNNTKVMKARLFG---------EKESGGKIEALIERVLDNHTALAHIRSSKSPKPGTKLI 107
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDAR 175
F + + A ++++ + L G + + + G +PLPPYI +R A
Sbjct: 108 F-----EGDICAVMVERADE---LFCLRFEGEQTVYELLEQNGHLPLPPYI--ERAAGAD 157
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+
Sbjct: 158 DDTRYQTVYAKHQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKI 217
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
++H MHSE + T A+ + +RG ++ +VGTTS+R LE+A E G + G T+I
Sbjct: 218 EEHKMHSEWFDVPPETVAAIEAAHARGNKVWAVGTTSMRALESAARETGRLKAGQGDTDI 277
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR +D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ H YRF+SYGD +
Sbjct: 278 FITPGYRFRVIDRLITNFHLPKSTLLMLVSAFSGMEHIRAVYRHAVEHEYRFFSYGDAMV 337
Query: 356 L 356
L
Sbjct: 338 L 338
>gi|255656788|ref|ZP_05402197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-23m63]
gi|296452383|ref|ZP_06894084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP08]
gi|296877731|ref|ZP_06901758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP07]
gi|296258713|gb|EFH05607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP08]
gi|296431264|gb|EFH17084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP07]
Length = 341
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLMGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + +D ++ Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYITAR--LDEKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LLS++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLSKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGNNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|212638559|ref|YP_002315079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anoxybacillus flavithermus WK1]
gi|212560039|gb|ACJ33094.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Anoxybacillus flavithermus WK1]
Length = 345
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 210/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ RD++RLMV+ + V + + ++L D +V
Sbjct: 3 MKIDLFDFYLPEELIAQTPLPNRDASRLMVL--DKQTGEVTHESTFRSILSYLKEGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G I+ F
Sbjct: 61 LNDTRVLPARLYGEK----EETGAHIEVLLLKQLDGDQWETLVKPAKRVKVGTIISF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + + G +L FS GI LE SL G +PLPPYI + D Y
Sbjct: 114 -GDGRLRAECVAELEHGGRILSFSYDGIFLEVLESL-GEMPLPPYIKAQ----LHDRERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 168 QTVYAREAGSAAAPTAGLHFTEQLLEDVRKKGVHLAFITLHVGLGTFRPVNVENIEEHDM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TAQ LN VK++GGRI++VGTTS R LET A+ DG SG+T+IFI P
Sbjct: 228 HAEFYQMSEQTAQLLNDVKAQGGRIIAVGTTSTRTLETIASRHDGTFVAESGWTDIFIYP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FRA+D +++NFHLPKSTL+MLVSA G E + Y+ A+ YRF+S+GD L+
Sbjct: 288 GYTFRAIDGIITNFHLPKSTLIMLVSALAGREHVLRAYEEAVKERYRFFSFGDAMLI 344
>gi|94311875|ref|YP_585085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
metallidurans CH34]
gi|166216742|sp|Q1LJ60|QUEA_RALME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|93355727|gb|ABF09816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
metallidurans CH34]
Length = 353
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/363 (43%), Positives = 213/363 (58%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH----PNLSCPLVISDHLVSDLPAFLNSN 56
+ + +FDF LPP IA + R ++RL+VV + S + + D SD+ +LN +
Sbjct: 2 LTLSDFDFPLPPELIAQSALPDRSASRLLVVERTAPEDTSEAVRLVDRAFSDILEYLNPD 61
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+VI A RF I + V ++ R SK +G +LH
Sbjct: 62 DLLVFNDTRVIKA-----RFFGHKPSGGRIEVLVERVVDTHTVLAQVRASKTPVEGSLLH 116
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ D + +D++ T L F ++L I G +PLPPYI DA D
Sbjct: 117 L-ADDAFAVTVGPRVDQFFT----LRFPEPALDL---IERYGRLPLPPYITHD--PDAYD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF L +RL + GI+ F+TLHVGAGTF PV+ E+
Sbjct: 167 ETRYQTVYARNPGAVAAPTAGLHFDDALFARLDAAGIRRAFLTLHVGAGTFQPVRTENLS 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE I A A+ ++RGGR+++VGTTSLR LE+A EDG + SG T+IF
Sbjct: 227 EHKMHSEWYAISPELADAVRETRARGGRVIAVGTTSLRALESAAAEDGTLEAGSGDTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY FR VD L++NFHLPKSTLLMLVSA G+E + Y+HA+ YRF+SYGD LL
Sbjct: 287 ITPGYAFRIVDALITNFHLPKSTLLMLVSALAGVEAIRDAYRHAVDARYRFFSYGDAMLL 346
Query: 357 FQK 359
++
Sbjct: 347 TRR 349
>gi|153816035|ref|ZP_01968703.1| hypothetical protein RUMTOR_02281 [Ruminococcus torques ATCC 27756]
gi|317500973|ref|ZP_07959183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|331089128|ref|ZP_08338031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 3_1_46FAA]
gi|145846682|gb|EDK23600.1| hypothetical protein RUMTOR_02281 [Ruminococcus torques ATCC 27756]
gi|316897676|gb|EFV19737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|330405905|gb|EGG85431.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 3_1_46FAA]
Length = 341
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 203/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM V I H+ S++ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSSSRLMTVDKETG---KIGHHVFSEIIDYLNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R + + W +P + K G + F
Sbjct: 58 INDTKVIPARLIGAK----EETGAKIEVLLLKRGADDVWETLVKPGRKAKPGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLVGEVVDIVDEGNRLIHFEYEGI-FEEILDQLGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YA+ GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D ++H M
Sbjct: 165 NTVYAEHSGSAAAPTAGLHFTPELLRKIEEKGVDIARVTLHVGLGTFRPVKVDDVENHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N K RGGR++ VGTTS R +E+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYMINEEAAEKINHAKDRGGRVICVGTTSCRTIESAADENGRLKACSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKTLDCLITNFHLPESTLIMLVSALAGKEHVMAAYEEAVKERYRFFSFGDAMLIL 341
>gi|153810635|ref|ZP_01963303.1| hypothetical protein RUMOBE_01019 [Ruminococcus obeum ATCC 29174]
gi|149833031|gb|EDM88113.1| hypothetical protein RUMOBE_01019 [Ruminococcus obeum ATCC 29174]
Length = 341
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RL+ H ++ H +D+ +L+ D +V
Sbjct: 1 MKTSDFYYDLPKELIAQDPLEDRSSSRLL--HLSMQDGSFEHRHF-TDILDYLHKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G H I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYG----HKEETGAVIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGILKGEIIDVVDEGNRLIQFHYDGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+K+ VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNDGSAAAPTAGLHFTRELLKQVEDMGVKIAHVTLHVGLGTFRPVKVDDVEQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+AT E+GI+ SG+T IFI PG
Sbjct: 225 HSEFYMVEEDQAKLINDTKKNGGRVISVGTTSCRTLESATDENGILQAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YHFKMIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMLI 340
>gi|269213885|ref|ZP_06158238.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
cinerea ATCC 14685]
gi|269145271|gb|EEZ71689.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
cinerea ATCC 14685]
Length = 356
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVGEGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ G + + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVER--AGALFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G++ VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLLRLKGKGVETAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARETGHLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + +Y+HA+ YRF+SYGD +L
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAVYRHAVEREYRFFSYGDAMIL 348
>gi|228960691|ref|ZP_04122335.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228798997|gb|EEM45970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 352
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 15/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDRYRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 167 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 227 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 287 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 339
>gi|157150443|ref|YP_001450865.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gordonii str. Challis substr. CH1]
gi|157075237|gb|ABV09920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gordonii str. Challis substr. CH1]
Length = 342
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV + SD + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVDRSSGE---FSDQHFDSIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----PGTGGHVELLLLKNTEGDQWEVLAKPAKRLKVGAQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVVDELEHGGRIVRFDYQGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+++VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAATLREVKANGHRVIAVGTTSIRTLETIGNKFKGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+++ VD +NFHLPKSTL+MLVSAF G + T K Y+HAI+ YRF+S+GD
Sbjct: 285 GYQWQIVDAFSTNFHLPKSTLVMLVSAFAGRDLTLKAYEHAIAERYRFFSFGD 337
>gi|157693175|ref|YP_001487637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus SAFR-032]
gi|167016403|sp|A8FFR0|QUEA_BACP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157681933|gb|ABV63077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus SAFR-032]
Length = 342
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FDFDLP IA P+ RD++RLMV++ ++ S + + + D +V
Sbjct: 1 MKLELFDFDLPERLIAQVPLEKRDASRLMVLNKQTG---EVTHDTFSQITDYFQTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ ++ L + + W +P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGMK----EDTGAKVELLLLKQEEGDKWETLVKPAKRVKKGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F +GI E SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLQAVCTEELEHGGRKVEFQYTGIFYEVLESL-GEMPLPPYI--KEQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYSKEVGSAAAPTAGLHFTNELLDALKEKGVHIAFITLHVGLGTFRPVSADRIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E ++ TA LN V+ GGRI+SVGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HAEFYEMNEETAAELNRVRKEGGRIISVGTTSTRTLETIASAHDGEFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E K Y A+ YRF+S+GD L+
Sbjct: 285 GYTFKAIDGMITNFHLPKSSLIMLVSALAGREHVLKAYNEAVKEEYRFFSFGDAMLI 341
>gi|307709512|ref|ZP_07645968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK564]
gi|307619731|gb|EFN98851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK564]
Length = 342
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRDTGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGRI++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAASTLRSVKENGGRIIAVGTTSIRTLETVGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|298492038|ref|YP_003722215.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase ['Nostoc
azollae' 0708]
gi|298233956|gb|ADI65092.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase ['Nostoc
azollae' 0708]
Length = 372
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 214/365 (58%), Gaps = 23/365 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+D++LPP IA P PRD++RL+VV+ PN+ + +H+ DLP L D +V NNT
Sbjct: 18 YDYELPPELIAQNPAVPRDTSRLLVVNSPNIGEEIPALNHIFRDLPDLLQPGDLLVMNNT 77
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD-GQ 123
KV+ A+L G + E+ L PN W +P K K G + F G+
Sbjct: 78 KVMPARLYGRKLTG-----AEVEVLLLEEKQPNCWLALVKPGKHFKVGTKIIFGGNKLGR 132
Query: 124 SR---------LEATVIDK-WNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPI 172
++ L A V+DK TG LL F + L + + G IPLPPYI
Sbjct: 133 AKHPATTNDDELMAIVVDKDTATGGRLLQFDLPEYRSLVQVLENFGEIPLPPYITGSTAA 192
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D + YQT YA+ G++AAPTAGLHFT LL +L + GI F+TLHVG GTF PV+V
Sbjct: 193 DEQ----YQTVYAQQTGAIAAPTAGLHFTPELLEKLRARGINQAFLTLHVGVGTFRPVEV 248
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED H MHSE +++ T + + + K+ GGRI+++GTT +R LE A + G + P+ G
Sbjct: 249 EDVTTHQMHSEWIEVNSATVEEIRATKAAGGRIIAIGTTVVRALEGA-AQSGDLQPYVGK 307
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
N+FI PGY+++ V+ L++NFHLP+S+LLMLVSA G E K+YQ AI+ YRFYS+GD
Sbjct: 308 VNLFIYPGYQWQVVEGLITNFHLPRSSLLMLVSALIGRERLLKIYQQAIASQYRFYSFGD 367
Query: 353 TSLLF 357
L+
Sbjct: 368 AMLIL 372
>gi|329769851|ref|ZP_08261250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
sanguinis M325]
gi|328837905|gb|EGF87529.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
sanguinis M325]
Length = 342
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFDF LP IA P+ RD+++L+ ++ + + SD+ + N D +V
Sbjct: 1 MKLEEFDFYLPEELIAQTPLLKRDTSKLLTINRKENT---YEHKVFSDIIDYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L N W +P+K IK G I+ F
Sbjct: 58 LNNTRVMPARLYGQK----KDTGAAIEVLLLKNKEHNMWECLVKPAKRIKVGSIVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +EA + + G F GI ER + +GT+PLPPYI + R Y
Sbjct: 111 -GDGIMEAECVKVLDDGFRYFEFKYEGIFQER-LDELGTMPLPPYIKERLTDKER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ G+ + ++TLHVG GTF PV VE+ +DH M
Sbjct: 165 QTVYSKEVGSSAAPTAGLHFTNELLDKIKQKGVNIVYLTLHVGLGTFRPVSVENIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE +D TA +N K GGR+ SVGTTS R LET A DG I P SG+TNIFI P
Sbjct: 225 HSEYYTLDEETANVINETKKNGGRVFSVGTTSTRTLETIARDNDGEIVPASGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+ VD L++NFHLPKS+L+MLVSAF E+ ++Y+ A+ + YRF+S+GD ++
Sbjct: 285 GFEFKCVDGLITNFHLPKSSLIMLVSAFYNREKVLELYKIAVENKYRFFSFGDAMII 341
>gi|126700420|ref|YP_001089317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile 630]
gi|123363078|sp|Q183N9|QUEA_CLOD6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115251857|emb|CAJ69692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Clostridium difficile]
Length = 341
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTRDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + +D ++ Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYITAR--LDEKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGKNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|164687536|ref|ZP_02211564.1| hypothetical protein CLOBAR_01177 [Clostridium bartlettii DSM
16795]
gi|164603310|gb|EDQ96775.1| hypothetical protein CLOBAR_01177 [Clostridium bartlettii DSM
16795]
Length = 341
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP IA P+ R S++LMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFNFDLPEELIAQVPIKDRTSSKLMVLDKETGE---IEHRIFRDIIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNDTRVIPARLIGSKV----ETGGKIEFLLLKRTEDDTWETLVKPGKRAKIGARFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V+ G ++ F +GI E + +G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGKLIAEVVGMGEDGARIVKFEYNGI-FEEILDELGNMPLPPYITEK--LDERER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKV+D D+H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLAKIKEKGVDLAFVTLHVGLGTFRPVKVDDVDNHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K+ G R++SVGTTS R +E+ E+GI+ SG+TNIFI PG
Sbjct: 225 HSEFYMVTQEAADKINKAKANGNRVISVGTTSTRTIESVADENGIVKATSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ +D L++NFHLP+STL+MLVS+ G E Y A+ YRF+S+GD +
Sbjct: 285 YKWKVIDNLITNFHLPESTLIMLVSSLAGKEHVLNAYNEAVKERYRFFSFGDAMFI 340
>gi|303240766|ref|ZP_07327279.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acetivibrio
cellulolyticus CD2]
gi|302591654|gb|EFL61389.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acetivibrio
cellulolyticus CD2]
Length = 341
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 206/361 (57%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EF +DLP IA P+ R +RLMVV I + D+ +LN+ D +V
Sbjct: 1 MRVSEFFYDLPEELIAQEPLQDRKQSRLMVVDRKTG---EIEHRIFKDIIEYLNTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+VI A+L G EKE I L + W V +P + K G
Sbjct: 58 LNDTRVIPARLLG---------EKEDTGGKIEFVLLKNTGGDIWEVILKPGRRAKPGSRF 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G L+A +ID G L+ F G+ E+ + VG +PLPPYI +K
Sbjct: 109 VF----GNGELKAEIIDVVEEGNRLVRFEYEGV-FEQILDRVGIMPLPPYITKK----LE 159
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+K +GS AAPTAGLHFT+ LL ++ GI++ +VTLHVG GTF PVKVE+
Sbjct: 160 DKERYQTVYSKHKGSAAAPTAGLHFTTELLEKIKEKGIEIAYVTLHVGLGTFRPVKVENI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE + +N+ + GG+I++VGTTS R++ET E G + P SG+T+I
Sbjct: 220 LEHKMHSEYYNLKEEDCNKINNTRKNGGKIIAVGTTSCRVIETIGDEFGALKPQSGWTDI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY F+ VD L++NFHLP+STLLMLVSA G + K Y A++ YRF+S+GD
Sbjct: 280 FIYPGYNFKVVDKLITNFHLPESTLLMLVSALAGRDTIMKAYNEAVNEKYRFFSFGDAMF 339
Query: 356 L 356
+
Sbjct: 340 I 340
>gi|306824944|ref|ZP_07458287.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432771|gb|EFM35744.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 342
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 212/358 (59%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVITEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGRI++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKEDGGRIIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + YQHAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYQHAIQERYRFFSFGDAMFIY 342
>gi|67458722|ref|YP_246346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
felis URRWXCal2]
gi|75536818|sp|Q4UMM7|QUEA_RICFE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|67004255|gb|AAY61181.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
felis URRWXCal2]
Length = 367
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 226/388 (58%), Gaps = 51/388 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ + P+ + + D +L D +V
Sbjct: 1 MKLSDFDFDLPTELIAQYPASERDNSDLLIA---TTPPIKTKFYNIID---YLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN E+ I+ L+ ++S +SWS +A+P++ + GD F+S
Sbjct: 55 FNNSKVIKAKLN---------LERNITINLNQKLSDDSWSAFAKPARKLNIGD--EFYSD 103
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR---------- 170
+ + + +K+ GEI + F + I + + G +PLP YI R +
Sbjct: 104 NHK----VIITEKFAMGEIKVKFELDNISVFEFLDKYGEMPLPVYIRRSKRHGEEEESSD 159
Query: 171 -------------------PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
D D + YQT Y++I+GSVAAPTAGLHFT +L +L +
Sbjct: 160 EAISSQNPEIATESKRTPSNDDKLDSLRYQTIYSQIEGSVAAPTAGLHFTKEILDKLKAK 219
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
G+++ FVTLHVGAGTF+PVK E+ +H +H+E I TA+ +N K RI++VGTT
Sbjct: 220 GVQIAFVTLHVGAGTFLPVKTENIHEHKIHTEYCSITPETAEIINKAKQERRRIIAVGTT 279
Query: 272 SLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
+LR LE++ +G++ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +
Sbjct: 280 TLRTLESSCN-NGVVKAGSFETDIFITPGFKFQTTDMLLTNFHFPKSTLFMLICAFAGFK 338
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLLFQK 359
E ++Y++AI RF+SYGD ++L++K
Sbjct: 339 EMHELYKYAIKEKMRFFSYGDATVLYRK 366
>gi|157828160|ref|YP_001494402.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165932858|ref|YP_001649647.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. Iowa]
gi|166216749|sp|A8GR69|QUEA_RICRS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038875|sp|B0BWL5|QUEA_RICRO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157800641|gb|ABV75894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165907945|gb|ABY72241.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. Iowa]
Length = 365
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 228/387 (58%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ P+ + + D +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLIA---VTPPIKTKFYNIID---YLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI AQLN K I+ L+ ++S +SWS +A+P++ + D +F +
Sbjct: 55 FNNSKVIKAQLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYFDNH 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 106 ------KVIITEKLAMGEIKVKFKLNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 DARDYVD--------------------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
++ Y++ YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE++ +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLESSCN-NGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|291539017|emb|CBL12128.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Roseburia
intestinalis XB6B4]
Length = 345
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RLMV+ N ++ + D+ +L D +V
Sbjct: 1 MDVKDFYYDLPQELIAQDPLKDRSSSRLMVLDKNTG---EVTHRVFKDITDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ E +I L R + W +P K K G + F
Sbjct: 58 INNTKVIPARLYGVK----EGTEAKIEILLLKRKENDIWETLVKPGKKCKVGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDIVEEGNRLIQFHYDGI-FEEILDQLGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+++ VTLHVG GTF PVK D H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTPELLKKVKEMGVEIAEVTLHVGLGTFRPVKETDVLKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A +N K G R+++VGTTS R LE A+ E+G + SG+T IFI PG
Sbjct: 225 HSEFYRIEQSEADKINHAKETGHRVIAVGTTSTRTLEAASDENGFLRETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKVIDSLITNFHLPESTLVMLVSALAGREHVLNAYEIAVQEKYRFFSFGDAMLI 340
>gi|296840698|ref|ZP_06863236.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
polysaccharea ATCC 43768]
gi|296840202|gb|EFH24140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
polysaccharea ATCC 43768]
Length = 356
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVGEGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDSHTALAHIRSSKSPKPDTKLIF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EA ++++ GE+ + S + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIEAVMLER--VGELFCLRFNSKQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G++ VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGVETAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVGAAKARGNKVWAVGTTSMRALESAARETGHLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + +Y+HA+ YRF+SYGD +L
Sbjct: 293 YRFNVADRLITNFHLPKSTLLMLVSAFSGMGHIRAVYRHAVEREYRFFSYGDAMIL 348
>gi|240146016|ref|ZP_04744617.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseburia
intestinalis L1-82]
gi|257201829|gb|EEV00114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseburia
intestinalis L1-82]
gi|291536123|emb|CBL09235.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Roseburia
intestinalis M50/1]
Length = 345
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RLMV+ N ++ + D+ +L D +V
Sbjct: 1 MDVKDFYYDLPQELIAQDPLEDRSSSRLMVLDKNTG---EVTHRVFKDITDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ E +I L R + W +P K K G + F
Sbjct: 58 INNTKVIPARLYGVK----EGTEAKIEILLLKRKENDIWETLVKPGKKCKVGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDIVEEGNRLIQFHYDGI-FEEILDQLGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+++ VTLHVG GTF PVK D H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTPELLKKVKEMGVEIAEVTLHVGLGTFRPVKETDVLKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A +N K G R+++VGTTS R LE A+ E+G + SG+T IFI PG
Sbjct: 225 HSEFYRIEQSEADKINHAKETGHRVIAVGTTSTRTLEAASDENGFLRETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKVIDSLITNFHLPESTLVMLVSALAGREHVLNAYEIAVQEKYRFFSFGDAMLI 340
>gi|322392655|ref|ZP_08066115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus peroris ATCC 700780]
gi|321144647|gb|EFX40048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus peroris ATCC 700780]
Length = 342
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL++V+ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEQRDASRLLIVNRKTGE---FQDRHFHSIIEMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----EETGGHVELLLLKNTVGDEWEVLAKPAKRLKVGARVIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYEGIFLEVLESL-GEMPLPPYIHEKLDDQER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLEEIQQKGVHLVYLTLHVGLGTFRPVTVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +K GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQIKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLEAYQHAIEERYRFFSFGDAMFIY 342
>gi|225857051|ref|YP_002738562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae P1031]
gi|225724890|gb|ACO20742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae P1031]
Length = 342
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKM----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|304321743|ref|YP_003855386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvularcula bermudensis HTCC2503]
gi|303300645|gb|ADM10244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvularcula bermudensis HTCC2503]
Length = 356
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 152/365 (41%), Positives = 206/365 (56%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD+DLP +IAL P RD ARL++V PN L++ L +D ++
Sbjct: 1 MRVDLFDYDLPEEQIALVPPPERDGARLLIVPPNGP----FGHDLIAHLAEHFGPSDVLI 56
Query: 61 FNNTKVITAQLNGVRFCH---------INRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
N+TKVI A L G+R + + C L R W + RP+K ++
Sbjct: 57 LNDTKVIPATLAGMRPARDVGGGDPAGVGIDITLLKC-LEERDDGVRWQAFVRPAKRVRA 115
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
GD + + + + E +L ++ + + GT+PLPPYIARKR
Sbjct: 116 GDDIEIGPVTAR-------VKRREGAEAVLHIPLTPSAFQSFLYDHGTMPLPPYIARKRA 168
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
++ D YQT + K GSVAAPTAGLHFT LLS + G + VTLHVGAGTF+P+
Sbjct: 169 VEVSDQDRYQTVFGKRPGSVAAPTAGLHFTDRLLSAIAERGATILRVTLHVGAGTFLPIT 228
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
D DH MHSE G + P A+ L + K+ G RI VGTT+LR++ETA + G + ++G
Sbjct: 229 AADCTDHRMHSEWGEVSPPVAERLRAAKAGGERITCVGTTALRIVETA-AQSGEVQAFAG 287
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFITPG+ F+ D L++NFHLP+STLLMLVSAF G E Y+ AI+ YRF+SYG
Sbjct: 288 ETDIFITPGFSFQCADRLLTNFHLPRSTLLMLVSAFSGRERILSAYREAINEGYRFFSYG 347
Query: 352 DTSLL 356
D LL
Sbjct: 348 DACLL 352
>gi|313201955|ref|YP_004040613.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. MP688]
gi|312441271|gb|ADQ85377.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. MP688]
Length = 351
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 213/359 (59%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LP IA P RD +RL+ + N I+DH +LP FLN+ D ++
Sbjct: 1 MRTEDFDFFLPEELIAQFPAAERDGSRLLRLDGNSGA---IADHQFRELPQFLNAGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + + + R S+ K G F
Sbjct: 58 FNDTRVIKARLQGHK-----ESGGSIELLIERPLDTHRALAHIRASRSPKPGS--RIFIG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + A VI++ + ++ L+ L + G +PLPPYI DA D Y
Sbjct: 111 DG---IPARVIERQD--DLFLIEVEHTTPLLDLLDQYGALPLPPYITHA--ADAEDDERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L RL + GI++ +VTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTVYARTPGAVAAPTAGLHFNQAMLDRLQTAGIQIAYVTLHVGAGTFQPVRVDDISEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI + T +N+ ++ G +I +VGTT+LR LE+A G + SG T+IFITPG
Sbjct: 224 HSEIYTVPPATVDLINTARAAGHKITAVGTTALRALESA-ARSGALVAGSGETDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ V+ L++NFHLPKSTL+MLVSAF G+E + Y HAI+ YRF+SYGD LL ++
Sbjct: 283 YRFQVVERLLTNFHLPKSTLMMLVSAFAGVENIRAAYAHAIASRYRFFSYGDAMLLERR 341
>gi|225854863|ref|YP_002736375.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae JJA]
gi|225723833|gb|ACO19686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae JJA]
Length = 342
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V N + H S + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIV--NRETGEMQDKHFYS-IIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|160893033|ref|ZP_02073821.1| hypothetical protein CLOL250_00571 [Clostridium sp. L2-50]
gi|156865116|gb|EDO58547.1| hypothetical protein CLOL250_00571 [Clostridium sp. L2-50]
Length = 349
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 207/362 (57%), Gaps = 26/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ RD++RLMV+ I D+ ++L D +V
Sbjct: 9 MQLSDFYYDLPQELIAQDPLLKRDNSRLMVLDREEGT---IEHKHFYDVISYLKEGDCLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+TKVI A+L G EKE I L R+ +W +P K + G +
Sbjct: 66 INDTKVIPARLIG---------EKEGTGAAIEVLLLKRLDDCTWETLVKPGKKARVGARI 116
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G +L VID G ++ F GI E + +G +PLPPYI K
Sbjct: 117 IF----GGGKLVGEVIDIVEEGNRIVRFEYEGI-FEEILDELGQMPLPPYITHK----LE 167
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YA+ +GS AAPTAGLHFT LL + + GIK+ VTLHVG GTF PVK ++
Sbjct: 168 DKNRYQTVYAEHEGSAAAPTAGLHFTKELLEEIKAKGIKIAHVTLHVGLGTFRPVKEDNI 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MHSE ID A+ +N K GGRI++VGTTS R LET E+G++ SG+T+I
Sbjct: 228 LDHHMHSEFYVIDEKAAETINETKKNGGRIIAVGTTSTRTLETVADENGMLRACSGWTDI 287
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+A+D L++NFHLP+STLLMLVSA E+ + Y+ A+ YRF+S+GD L
Sbjct: 288 FIYPGYKFKAIDGLITNFHLPESTLLMLVSALYSREKILEAYKVAVEERYRFFSFGDAML 347
Query: 356 LF 357
+
Sbjct: 348 IL 349
>gi|149002808|ref|ZP_01827734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS69]
gi|237650471|ref|ZP_04524723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CCRI 1974]
gi|237821798|ref|ZP_04597643.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CCRI 1974M2]
gi|147759102|gb|EDK66096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS69]
Length = 342
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|262283157|ref|ZP_06060924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. 2_1_36FAA]
gi|262261409|gb|EEY80108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. 2_1_36FAA]
Length = 342
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 210/354 (59%), Gaps = 17/354 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL++V + SD + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLIVDRSSGE---FSDQHFDSIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----PGTGGHVELLLLKNIEGDHWEVLAKPAKRLKVGAQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELEHGGRIVRFDYQGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+++VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAATLREVKANGHRVIAVGTTSIRTLETIGNKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY+++ VD +NFHLPKSTL+MLVSAF G + T K Y+HAI+ YRF+S+GD
Sbjct: 285 GYQWQIVDAFSTNFHLPKSTLVMLVSAFAGRDLTLKAYEHAIAERYRFFSFGDA 338
>gi|257870720|ref|ZP_05650373.1| queuosine biosynthesis protein [Enterococcus gallinarum EG2]
gi|257804884|gb|EEV33706.1| queuosine biosynthesis protein [Enterococcus gallinarum EG2]
Length = 343
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF+LP IA P+ R S+RL+VV + D D+ L DA+V
Sbjct: 2 LTTEDFDFELPEELIAQTPLSDRSSSRLLVVDRESGA---MEDKRFYDIIDELAPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + +SW +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEKI----ETGAHLEILLLNNIEGDSWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V + G ++ FS GI LE SL G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEKELEHGGRIIRFSYDGIFLEILESL-GEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLKKIADKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNDVRANGGKIVAVGTTSIRTLETIGTKFDGDIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V +NFHLPKSTL+MLVSAF G + T + YQHAI YRF+S+GD L
Sbjct: 286 GYQFKVVQAFSTNFHLPKSTLVMLVSAFAGRDLTLEAYQHAIDERYRFFSFGDAMFL 342
>gi|301794456|emb|CBW36890.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae INV104]
Length = 342
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGE---MQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|291519050|emb|CBK74271.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Butyrivibrio fibrisolvens 16/4]
Length = 345
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+VK+FD++LP IA P+ R ++RLMV+ + I+ D+ +L D +V
Sbjct: 1 MLVKDFDYELPEELIAQDPLEKRSNSRLMVLDKHTG---EIAHRHFYDIKEYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R + + L R+S N W +P K + G + F
Sbjct: 58 INNTRVIPARLYGARVGSGGK----VEILLLKRISDNQWECLVKPGKKARPGMEISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ++D + G ++ F+ GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGLLIGKIVDIVDEGNRIIEFTYEGI-FEEILDKLGEMPLPPYITHK----LQDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + ++G+++ VTLHVG GTF PVK ++ DH M
Sbjct: 165 QTVYAKFDGSAAAPTAGLHFTPELLEEVKAMGVRIAEVTLHVGLGTFRPVKEDEVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +N K+ GGR++SVGTTS R LE+A ++P SG+T IFI PG
Sbjct: 225 HSEYYEITQEACDIINETKANGGRVISVGTTSTRTLESAAEAGKPLSPKSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 YEFKVIDCLITNFHLPQSTLIMLVSALAGREHVLAAYKKAVEEKYRFFSFGDAMMI 340
>gi|255101975|ref|ZP_05330952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-63q42]
gi|255307843|ref|ZP_05352014.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile ATCC 43255]
Length = 341
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + +D ++ Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYITAR--LDEKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGKNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|254976399|ref|ZP_05272871.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-66c26]
gi|255093785|ref|ZP_05323263.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CIP 107932]
gi|255315536|ref|ZP_05357119.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-76w55]
gi|255518199|ref|ZP_05385875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-97b34]
gi|255651315|ref|ZP_05398217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-37x79]
gi|260684379|ref|YP_003215664.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CD196]
gi|260688038|ref|YP_003219172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile R20291]
gi|306521147|ref|ZP_07407494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-32g58]
gi|260210542|emb|CBA65071.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CD196]
gi|260214055|emb|CBE06218.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile R20291]
Length = 341
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + +D ++ Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFLYDGI-FEEILDELGNMPLPPYITAR--LDEKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGNNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|255283315|ref|ZP_05347870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bryantella
formatexigens DSM 14469]
gi|255266169|gb|EET59374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bryantella
formatexigens DSM 14469]
Length = 341
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ + H+ ++ +LN D +V
Sbjct: 1 MKTSDFYFDLPQELIAQDPLEDRSSSRLLVLDRRTGQ---MEHHIFKEIVHYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLFGSKVG----TDAKIEILLLKRREGDVWETLVKPGKKAKPGTQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V++ G L+ F+ GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGILMGEVLEVAEDGNRLIRFTYEGI-FEEILDRLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVKVE+ H M
Sbjct: 165 QTVYAKHDGSAAAPTAGLHFTPELLQEIRDKGVNIAHVTLHVGLGTFRPVKVEEVTQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GG+I+ VGTTS R +E+A E+GI++ SG+T+IFI PG
Sbjct: 225 HSEFYMVEEEQAELINRTKANGGKIICVGTTSCRTIESAADENGILHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STLLMLVSA G E +K Y A+ YRF+S+GD L+
Sbjct: 285 YRFKILDELITNFHLPESTLLMLVSALAGKENIEKAYAEAVKERYRFFSFGDAMLI 340
>gi|257081115|ref|ZP_05575476.1| queuosine biosynthesis protein [Enterococcus faecalis E1Sol]
gi|257415434|ref|ZP_05592428.1| queuosine biosynthesis protein [Enterococcus faecalis AR01/DG]
gi|256989145|gb|EEU76447.1| queuosine biosynthesis protein [Enterococcus faecalis E1Sol]
gi|257157262|gb|EEU87222.1| queuosine biosynthesis protein [Enterococcus faecalis ARO1/DG]
Length = 343
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V
Sbjct: 2 LSTEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGA---MEDKHFHDILDELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI K +D D Y
Sbjct: 112 -GDGRLKAVVKEELEHGGRIIEFKYDGIFLEILESL-GEMPLPPYI--KERLDDPDR--Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H M
Sbjct: 166 QTVYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD
Sbjct: 286 GYQFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGD 338
>gi|149011658|ref|ZP_01832854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP19-BS75]
gi|147764089|gb|EDK71021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP19-BS75]
Length = 342
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|182684374|ref|YP_001836121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CGSP14]
gi|182629708|gb|ACB90656.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CGSP14]
Length = 346
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 5 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 62 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 115 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 169 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 229 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 289 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 346
>gi|148989540|ref|ZP_01820899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP6-BS73]
gi|149007314|ref|ZP_01830972.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP18-BS74]
gi|149019372|ref|ZP_01834734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP23-BS72]
gi|168493320|ref|ZP_02717463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC3059-06]
gi|221232156|ref|YP_002511309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae ATCC 700669]
gi|303254571|ref|ZP_07340675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS455]
gi|303259012|ref|ZP_07344991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP-BS293]
gi|303261696|ref|ZP_07347643.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS292]
gi|303264365|ref|ZP_07350285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS397]
gi|303265836|ref|ZP_07351733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS457]
gi|303268169|ref|ZP_07353968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS458]
gi|307127015|ref|YP_003879046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 670-6B]
gi|147761118|gb|EDK68086.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP18-BS74]
gi|147925083|gb|EDK76164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP6-BS73]
gi|147931242|gb|EDK82221.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP23-BS72]
gi|183576547|gb|EDT97075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC3059-06]
gi|220674617|emb|CAR69180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae ATCC 700669]
gi|301802157|emb|CBW34894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae INV200]
gi|302598539|gb|EFL65581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS455]
gi|302637276|gb|EFL67764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS292]
gi|302639955|gb|EFL70411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP-BS293]
gi|302642248|gb|EFL72596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS458]
gi|302644571|gb|EFL74821.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS457]
gi|302646177|gb|EFL76404.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS397]
gi|306484077|gb|ADM90946.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 670-6B]
gi|332074739|gb|EGI85213.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA17545]
Length = 342
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|251798373|ref|YP_003013104.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. JDR-2]
gi|247545999|gb|ACT03018.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. JDR-2]
Length = 348
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 212/360 (58%), Gaps = 15/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ R ++RL+ ++ I+ +DL ++N+ D +V
Sbjct: 1 MNVDWFDFELPEHLIAQTPLADRTASRLLALNKETGE---IAHRTFTDLAEYMNAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L GV+ +I L ++ + W A+P+K IK G L F
Sbjct: 58 LNNTRVIPARLTGVK----PDTGAKIELLLLKQLEGDRWETLAKPAKRIKVGSELWFGDN 113
Query: 121 -DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ L A V D+ + G + F GI + + +G +PLPPYI K ++ R+
Sbjct: 114 GSGEPLLRAIVEDEGDMGGRTIRFRYEGI-FQELLDRLGEMPLPPYI--KERLEERER-- 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK +GS AAPTAGLHFT L +L+ G+K+ ++TLHVG GTF P+ V+ ++H
Sbjct: 169 YQTVYAKHEGSAAAPTAGLHFTKEFLQQLVDKGVKLAYITLHVGLGTFRPMSVDKVEEHE 228
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--ATTEDGIINPWSGFTNIFI 297
MHSE +D A +N KS G RI++VGTTS R LET A E G I +G+T+IFI
Sbjct: 229 MHSEYYELDEQNAVIINEAKSSGARIIAVGTTSSRTLETVAARFEGGPIEACNGWTDIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLPKSTL+MLVSA G E K Y A+ YRF+S+GD ++
Sbjct: 289 FPGYNFKLVDALLTNFHLPKSTLVMLVSALAGREAIMKAYGEAVREEYRFFSFGDAMFIY 348
>gi|260438605|ref|ZP_05792421.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Butyrivibrio crossotus DSM 2876]
gi|292809196|gb|EFF68401.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Butyrivibrio crossotus DSM 2876]
Length = 341
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K F++DLP IA P+ R S+RLMV+H + I + D+ +LN D +V
Sbjct: 1 MDLKAFNYDLPEELIAQDPLEDRSSSRLMVLHKDTG---RIEHKIFRDIIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G++ I L R + + W +P K + G + F
Sbjct: 58 INDTKVIPARLMGIK----EDTGAAIEVLLLKRNADDVWECLVKPGKKARTGARIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L ++D G ++ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GEGLLVGEIVDVIEDGNRMIKFHYEGI-FEEILDKLGQMPLPPYITHK----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ V +TLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLEKIKEKGVNVVSITLHVGLGTFRPVKVDKIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I A +N ++ GGR+++VGTTS R LE+A +DG I SG T+IFI PG
Sbjct: 225 HTETFNISKEAADTINRTRAAGGRVIAVGTTSCRTLESAAADDGTIPARSGDTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STL+MLVSA G + Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKAIDCLITNFHLPESTLIMLVSALAGRDNIMNAYETAVKERYRFFSFGDAMFI 340
>gi|292670916|ref|ZP_06604342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
noxia ATCC 43541]
gi|292647537|gb|EFF65509.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
noxia ATCC 43541]
Length = 343
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 216/360 (60%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP +IA P PRDS+RLMV++P I H L FL D ++
Sbjct: 1 MDISDFDYDLPQEQIAQVPAEPRDSSRLMVLNPKERT---IQHHYFYQLEDFLKKGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R ++ L ++ N W V +P K + G ++ F +
Sbjct: 58 FNDTRVIPARLIGER----EHTGGKVEIFLLHQMDKNHWEVLVKPGKKARIGTVISFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +ID+ + G ++ F +G+ E + +GT+PLPPYI D Y
Sbjct: 114 -----LSCEIIDRTDFGGRIVRFIYNGV-FEEILDRLGTMPLPPYIHET----LEDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y +++GS AAPTAGLHFT L+ RL G++ F+TLHVG GTF PV V+ +DH+M
Sbjct: 164 QTVYNRVKGSAAAPTAGLHFTEALMERLREKGVQFGFITLHVGLGTFRPVHVDVVEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA+ + + K G R++SVGTTS+R LE A GII SG+T+IFI PG
Sbjct: 224 HREFYSIPPETAELVQTAKKEGRRVISVGTTSIRTLEAAVASAGIIAAGSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F+ VD +++NFHLPKSTL+MLVSAF G + T + Y+ A+ YRF+S+GD +++ Q R
Sbjct: 284 YQFKVVDAVITNFHLPKSTLIMLVSAFAGRDFTLEAYRTAVEERYRFFSFGD-AMMIQMR 342
>gi|315645788|ref|ZP_07898909.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus vortex V453]
gi|315278549|gb|EFU41863.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus vortex V453]
Length = 343
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 213/359 (59%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ I+ +D+ LN+ D +V
Sbjct: 1 MNVDLYDFELPEQLIAQTPLLDRSSSRLLTLNKESGQ---INHQTFADIIDSLNAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + E L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEKEDTGAKAE----VLLLKSMGQDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K +D RD Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYI--KEKLDDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDVVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGI-INPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ +G + SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQMNGEPLRESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E K Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMKAYKEAVEDKYRFFSFGDAMFIY 343
>gi|194397598|ref|YP_002038064.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae G54]
gi|226713852|sp|B5E5S4|QUEA_STRP4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194357265|gb|ACF55713.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae G54]
Length = 342
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDXWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|169832445|ref|YP_001694851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Hungary19A-6]
gi|238688427|sp|B1ICL6|QUEA_STRPI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|168994947|gb|ACA35559.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Hungary19A-6]
Length = 342
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|225859181|ref|YP_002740691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 70585]
gi|225720571|gb|ACO16425.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 70585]
Length = 342
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGE---MQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|253574939|ref|ZP_04852279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. oral taxon 786 str. D14]
gi|251845985|gb|EES73993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. oral taxon 786 str. D14]
Length = 353
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 211/359 (58%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R ++RL+ ++ I H SD+ +L D +V
Sbjct: 12 MNVDLYDFELPEELIAQTPLAERTASRLLTLNKQTG---EIRHHKFSDILDYLQPGDTLV 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + E L + + W +P K +K G ++ F +
Sbjct: 69 LNDTRVIPARLFGIKEGTGAKAE----VLLLKNLGEDRWEALVKPGKKLKTGSVIVFGDE 124
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV + + GE +L F+ GI + +G +PLPPYI K +D R+ Y
Sbjct: 125 -----LRATVESEGDMGERVLRFAYEGI-FNEILDRLGQMPLPPYIKEK--LDDRE--RY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ + G+ + FVTLHVG GTF P+ V+ +DH+M
Sbjct: 175 QTVYSKHEGSAAAPTAGLHFTEELLEQVRAKGVTIAFVTLHVGLGTFRPMSVDRVEDHVM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H E + TA LN K+RGGR+++VGTTS R LET E G I SG+T IFI
Sbjct: 235 HEEYYVLPQETADVLNETKARGGRVIAVGTTSARTLETVAKQCEGGPIVKSSGWTGIFIY 294
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F VD L++NFHLPKSTL+MLVSA G E + YQ AI+ YRF+S+GD ++
Sbjct: 295 PGYQFGLVDALLTNFHLPKSTLVMLVSALAGRERILQAYQEAINLKYRFFSFGDAMFIY 353
>gi|322388742|ref|ZP_08062339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus infantis ATCC 700779]
gi|321140361|gb|EFX35869.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus infantis ATCC 700779]
Length = 345
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 207/354 (58%), Gaps = 17/354 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FDF LP IA P+ RD+++L++V+ D + L DA+V N+T
Sbjct: 8 DFDFHLPEELIAQTPLEKRDASKLLMVNRKTGE---FQDRHFHSIIEMLEPGDALVMNDT 64
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A+L+G + + L + + W V A+P+K +K G + F G
Sbjct: 65 RVLPARLHGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVIF----GDG 116
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ YQT Y
Sbjct: 117 RLSAVVTEELTHGGRIVRFEYEGIFLEVLESL-GEMPLPPYIHEK--LDDRER--YQTVY 171
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
AK GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PV V++ D+H MHSE
Sbjct: 172 AKESGSAAAPTAGLHFTKELLEEIQQKGVHLVYLTLHVGLGTFRPVSVDNLDEHEMHSEF 231
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRF 303
+ A L VK GGR+++VGTTS+R LET ++ DG I SG+TNIFI PGY +
Sbjct: 232 YQLSEEAAATLRQVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKPGYDW 291
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ VD +NFHLPKSTL+MLVSAF G E K YQHAI YRF+S+GD ++
Sbjct: 292 KVVDAFSTNFHLPKSTLVMLVSAFAGRELVLKAYQHAIDEKYRFFSFGDAMFIY 345
>gi|312110089|ref|YP_003988405.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y4.1MC1]
gi|311215190|gb|ADP73794.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y4.1MC1]
Length = 342
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/362 (43%), Positives = 208/362 (57%), Gaps = 27/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIRHETFRNILSYLREGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+V+ A+L G EKE I L ++ + W +P+K +K G +
Sbjct: 58 LNDTRVMPARLYG---------EKENTGAHIEVLLLKQLEGDRWETLVKPAKRVKAGTKI 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G RL+AT +D G +L FS GI E + +G +PLPPYI K R
Sbjct: 109 IF----GDGRLQATCVDTLEHGGRVLQFSYRGIFYE-VLEQLGEMPLPPYIKEKLADPER 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+
Sbjct: 164 ----YQTVYAREIGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVNVENI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTN 294
++H MH+E + TAQ LN K +GGRI++VGTTS R LET A DG SG+T+
Sbjct: 220 EEHDMHAEFYQMTEATAQLLNETKRQGGRIIAVGTTSTRTLETIAARHDGTFVAESGWTD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+A+D L++NFHLPKSTL+MLVSA G E Y A+ YRF+S+GD
Sbjct: 280 IFIYPGYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILHAYNVAVKERYRFFSFGDAM 339
Query: 355 LL 356
L+
Sbjct: 340 LI 341
>gi|322389159|ref|ZP_08062720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 903]
gi|321144064|gb|EFX39481.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 903]
Length = 342
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 205/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTGQ---FQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVK----PETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVRFHYQGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGD 337
>gi|296876827|ref|ZP_06900875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 15912]
gi|296432329|gb|EFH18128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 15912]
Length = 342
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 205/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTGK---FQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVK----PETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVRFHYQGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGD 337
>gi|86158966|ref|YP_465751.1| queuosine biosynthesis protein [Anaeromyxobacter dehalogenans
2CP-C]
gi|123498575|sp|Q2IKY3|QUEA_ANADE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85775477|gb|ABC82314.1| Queuosine biosynthesis protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 345
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/359 (43%), Positives = 210/359 (58%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P + +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPGEGAP---AHRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + C W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS--GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLAF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG LEA V G + G ELE + G IPLPPYI +R DA D Y
Sbjct: 113 DG---LEARVDAVEGEGFYRVTLDRQGAELEAALGRAGRIPLPPYI--RRAPDAEDAARY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT LL+RL + G++ VTLHVG GTF+P++ +D D H M
Sbjct: 168 QTIWARAPGSAAAPTAGLHFTEPLLARLAARGVRRTAVTLHVGPGTFLPIRGDDLDAHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A L + ++RGGRIV+VGTTS+R LE+A DG + P G T +FI PG
Sbjct: 228 HGERYEVSPAAAAELAAARARGGRIVAVGTTSVRTLESA-WRDGEVAPGPGRTELFIRPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ FRAVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD LL ++
Sbjct: 287 HPFRAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLLLRR 345
>gi|313904205|ref|ZP_07837584.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Eubacterium
cellulosolvens 6]
gi|313471007|gb|EFR66330.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Eubacterium
cellulosolvens 6]
Length = 344
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 206/356 (57%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++DLP IA P+ R ++R+M + + D + +++ L D +V
Sbjct: 3 MKTSDFNYDLPVELIAQDPLEDRSASRMMYMDKETG---ELKDEIFTEVIDHLREGDCLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W RP K K G + F +
Sbjct: 60 LNDTKVIPARLYGTK----KDTGALIEVLLLTRKQNDVWETLVRPGKKCKIGTEI-VFGE 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G + VID G + FS GI E + +G +PLPPYI K +D Y
Sbjct: 115 EG--LMTGKVIDVTEDGNRFIQFSYEGI-FEEILDRLGEMPLPPYIKHK----LQDKTMY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YAK GS AAPTAGLHFT LL ++ + G+K+ VTLHVG GTF PVKV+D H M
Sbjct: 168 NTVYAKNDGSAAAPTAGLHFTKELLEKISAKGVKIAHVTLHVGLGTFRPVKVDDVTQHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ ++ A+ +N K+ GGR++ VGTTS R LE+AT E+GI+ P S +TNIFI PG
Sbjct: 228 HSELYIVEEDQAKIINDTKAAGGRVICVGTTSCRTLESATDENGILQPGSAWTNIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSAF G ++ Y+ A+ YRF+S+GD ++
Sbjct: 288 YTFKIMDGLITNFHLPESTLIMLVSAFAGKDKVMHAYETAVEKKYRFFSFGDAMMI 343
>gi|239827856|ref|YP_002950480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
sp. WCH70]
gi|259551452|sp|C5D5E6|QUEA_GEOSW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|239808149|gb|ACS25214.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. WCH70]
Length = 342
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 212/362 (58%), Gaps = 27/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L+ D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIRHETFRNILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+V+ A+L G EKE I L ++ + W +P+K +K G +
Sbjct: 58 LNDTRVMPARLYG---------EKENTGANIEVLLLKQLEGDRWETLVKPAKRVKVGTEI 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G RL+AT +D G +L FS GI E + +G +PLPPYI K R
Sbjct: 109 TF----GDGRLKATCVDTLEHGGRILEFSYQGIFYE-VLEQLGEMPLPPYIKEKLDDPER 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+
Sbjct: 164 ----YQTVYAREVGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVSVENI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTN 294
++H MH+E + TA+ LN V+ +GGRI++VGTTS R LET A+ +G SG+T+
Sbjct: 220 EEHDMHAEFYQMTEETARLLNEVRQQGGRIIAVGTTSTRTLETIASKHNGAFVAESGWTD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+A+D L++NFHLPKSTL+MLVSA G E + Y A+ YRF+S+GD
Sbjct: 280 IFIYPGYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILRAYNAAVKERYRFFSFGDAM 339
Query: 355 LL 356
L+
Sbjct: 340 LI 341
>gi|312867272|ref|ZP_07727482.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis F0405]
gi|311097401|gb|EFQ55635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis F0405]
Length = 342
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTGQ---FQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVK----PETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVHFHYQGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD +
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGDAMFI 341
>gi|295399351|ref|ZP_06809333.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
thermoglucosidasius C56-YS93]
gi|294978817|gb|EFG54413.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
thermoglucosidasius C56-YS93]
Length = 342
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIHHETFRNILSYLREGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G + F
Sbjct: 58 LNDTRVMPARLYGEK----ENTGAHIEVLLLKQLEGDRWETLVKPAKRVKAGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT +D G +L FS GI E + +G +PLPPYI K R Y
Sbjct: 111 -GDGRLQATCVDTLEHGGRVLQFSYRGIFYE-VLEQLGEMPLPPYIKEKLADPER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVNVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TAQ LN K +GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMTEATAQLLNETKRQGGRIIAVGTTSTRTLETIAARHDGTFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSA G E Y A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILHAYNVAVKERYRFFSFGDAMLI 341
>gi|238650431|ref|YP_002916283.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
peacockii str. Rustic]
gi|259551484|sp|C4K0Y4|QUEA_RICPU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238624529|gb|ACR47235.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
peacockii str. Rustic]
Length = 365
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 227/387 (58%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ PL+ + ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLIA----VTPLIKTK--FYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S +SWS +A+P++ + D +F +
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYFDNH 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 106 ------KVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 DARDYVD--------------------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
++ Y++ YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE++ +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLESSCN-NGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|253578958|ref|ZP_04856229.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849901|gb|EES77860.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 341
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM H +L + H +D+ ++ D +V
Sbjct: 1 MKTSDFYYDLPQELIAQDPLEDRSSSRLM--HLSLKDGSIEHRHF-TDVLDYMEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G H I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYG----HKEETGALIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GNGILKGKIIDVVDEGNRLIQFHYEGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLEKVKEKGVNIAHVTLHVGLGTFRPVKVDDVESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K G R+++VGTTS R LE+AT EDGI+ SG+T IFI PG
Sbjct: 225 HSEFYIVEEDQAKLINDTKKAGKRVIAVGTTSCRTLESATGEDGILKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +L
Sbjct: 285 YHFKMIDALITNFHLPESTLVMLVSALAGKENIMHAYEVAVQEKYRFFSFGDAMIL 340
>gi|239637555|ref|ZP_04678527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus warneri L37603]
gi|239596773|gb|EEQ79298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus warneri L37603]
Length = 341
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 215/357 (60%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M +++FD+DLP S IA P+ RD +RL+V++ N +HL D+ + N D +
Sbjct: 1 MNIEDFDYDLPESLIAQTPLKNRDQSRLLVLNRNNGN----MEHLHFKDVINYFNPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNQLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I++ + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GDGKIIAECIEELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV V++ DDH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLESIKAKGVNIAFITLHVGLGTFRPVSVDNIDDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN + +G RI+SVGTTS R LET + SG+T+IFI P
Sbjct: 224 MHSEYYQMTQETADLLNETRKKGHRIISVGTTSTRTLETIRRDHSEFVEKSGWTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ ++A+D L++NFHLPKSTL+MLVSAF E YQ A+ YRF+S+GD L+
Sbjct: 284 GFEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYQKAVEMEYRFFSFGDAMLI 340
>gi|319939489|ref|ZP_08013849.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus 1_2_62CV]
gi|319811475|gb|EFW07770.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus 1_2_62CV]
Length = 342
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 211/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV+ + D + L+ DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVNHETGQ---MEDTHFDAIIDQLHPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L ++ + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----PETGGHVELLLLKNIAGDDWEVLAKPAKRLKVGAAISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G ++ F GI LE SL G +PLPPYI K +D Y
Sbjct: 111 -GDGRLTATVLEELEHGGRIVRFHYQGIFLEVLESL-GEMPLPPYIHEK----LKDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G +V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAANTLRQVKASGHHVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLSAYQHAIDEKYRFFSFGD 337
>gi|307705266|ref|ZP_07642132.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK597]
gi|307621179|gb|EFO00250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK597]
Length = 342
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAVTLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|261365393|ref|ZP_05978276.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa ATCC 25996]
gi|288566193|gb|EFC87753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa ATCC 25996]
Length = 347
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 213/357 (59%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D +LP ++ + D +V
Sbjct: 1 MDISDFDFTLPDQLIAQHPPEVRGSSRLLVALPDMP----LQDRAFGNLPDYIEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQK-----ESGGKIEALIERVLDNHTALAHIRSSKSPKPGTKLIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + A ++++ + L G + + + G +PLPPYI +R A D
Sbjct: 109 --EGDICAVMVERADE---LFCLRFEGEQTVYELLEQNGHLPLPPYI--ERAAGADDDKR 161
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H
Sbjct: 162 YQTVYAKHQGAVAAPTAGLHFTDELLGRLKTKGVETAEVTLHVGAGTFQPVRVDKIEEHK 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + T A+ + +RG ++ +VGTTS+R LE+A E G + G T+IFITP
Sbjct: 222 MHSEWFDVPPETVAAIEAAHARGNKVWAVGTTSMRALESAARETGRLKAGQGDTDIFITP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRFR +D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ H YRF+SYGD +L
Sbjct: 282 GYRFRVIDRLITNFHLPKSTLLMLVSAFSGMEHIRTVYRHAVEHEYRFFSYGDAMVL 338
>gi|28211815|ref|NP_782759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
tetani E88]
gi|28204257|gb|AAO36696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
tetani E88]
Length = 344
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 200/352 (56%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+ LP IA P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 4 MKAKDFDYYLPEELIAQHPLEKRDECRLMVLDKETGH---VEHKVFKDILDYLNKGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + ++ L R ++W +P K K G F
Sbjct: 61 LNDTRVMPARLIGEK----EETKGKMEFLLLKRTDKDTWETLVKPGKRAKIGSRFIF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 114 -GQGELKAEVIGMAEEGSRIVKFEYDGI-FEEVLDRLGQMPLPPYITEK----LEDKEKY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ GIK+ F+TLHVG GTF PVK + ++HIM
Sbjct: 168 QTVYSKESGSAAAPTAGLHFTEELLNKIKEKGIKIVFLTLHVGLGTFRPVKEGEIENHIM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N+ K GGR+++VGTTS R LET ++ G I SG+TNIF+ PG
Sbjct: 228 HSEYYCISKETADIINTTKEAGGRVIAVGTTSCRTLETLGSKHGKIIEDSGWTNIFMYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y F+ D L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD
Sbjct: 288 YEFKVTDALITNFHLPQSTLIMLVSALSERERVLNAYEIAVREKYRFFSFGD 339
>gi|229146989|ref|ZP_04275351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST24]
gi|228636486|gb|EEK92954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST24]
Length = 350
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|327439542|dbj|BAK15907.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Solibacillus silvestris StLB046]
Length = 345
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 205/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RLMVV+PN L + H + LN+ D +V
Sbjct: 1 MKVEDFDFYLPEELIAQTPLLDRTASRLMVVNPN---SLEVEHHTFGHILDELNAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ I L + + + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVK----ADTGANIELLLLKQTNDDEWETLVKPAKRVKTGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L AT + + G F+ GI E + +G +PLPPYI K D Y
Sbjct: 111 -GDGLLTATCTGELDHGGRTFKFTYDGIFYE-ILDQLGEMPLPPYIREK----LEDQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + + G++V F+TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKERGSAAAPTAGLHFTQPLLEAIKAKGVEVVFITLHVGLGTFRPVSVDSIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A + VK GG+++SVGTTS R LET A+ DG I G+TNIFI P
Sbjct: 225 HSEFYSVSEEAAAVIERVKQAGGKVISVGTTSTRTLETVASKNDGKIVASHGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++A+D L++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD
Sbjct: 285 GYEYKAIDGLITNFHLPKSTLVMLVSALASKETIMNAYEQAVKEKYRFFSFGD 337
>gi|65321784|ref|ZP_00394743.1| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase) [Bacillus anthracis str. A2012]
Length = 354
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|253999982|ref|YP_003052045.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. SIP3-4]
gi|253986661|gb|ACT51518.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. SIP3-4]
Length = 351
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 213/359 (59%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LP IA P RD +RL+ + N I+DH +LP FLN+ D ++
Sbjct: 1 MRTEDFDFFLPEELIAQFPAAERDGSRLLRLDGNSGA---IADHQFRELPQFLNAGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + + + R S+ K G F
Sbjct: 58 FNDTRVIKARLQGHK-----ESGGSIELLIERPLDTHRALAHIRASRSPKPGS--RIFIG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + A VI++ + ++ L+ L + G +PLPPYI DA D Y
Sbjct: 111 DG---IPARVIERQD--DLFLIEVEHVTPLLDLLDQYGALPLPPYITHA--ADAEDDERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L RL + GI++ +VTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTIYARTPGAVAAPTAGLHFNQVMLDRLQAAGIQIAYVTLHVGAGTFQPVRVDDISEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI + T +N+ ++ G +I +VGTT+LR LE+A G + SG T+IFITPG
Sbjct: 224 HSEIYTVPPATVDLINTARAAGHKITAVGTTALRALESA-ARSGALVAGSGETDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ V+ L++NFHLPKSTL+MLVSAF G+E + Y HAI+ YRF+SYGD LL ++
Sbjct: 283 YRFQVVERLLTNFHLPKSTLMMLVSAFAGVEHIRAAYAHAIASRYRFFSYGDAMLLERR 341
>gi|46577020|sp|Q891Z9|QUEA_CLOTE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 341
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 200/352 (56%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+ LP IA P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 1 MKAKDFDYYLPEELIAQHPLEKRDECRLMVLDKETGH---VEHKVFKDILDYLNKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + ++ L R ++W +P K K G F
Sbjct: 58 LNDTRVMPARLIGEK----EETKGKMEFLLLKRTDKDTWETLVKPGKRAKIGSRFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GQGELKAEVIGMAEEGSRIVKFEYDGI-FEEVLDRLGQMPLPPYITEK----LEDKEKY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ GIK+ F+TLHVG GTF PVK + ++HIM
Sbjct: 165 QTVYSKESGSAAAPTAGLHFTEELLNKIKEKGIKIVFLTLHVGLGTFRPVKEGEIENHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N+ K GGR+++VGTTS R LET ++ G I SG+TNIF+ PG
Sbjct: 225 HSEYYCISKETADIINTTKEAGGRVIAVGTTSCRTLETLGSKHGKIIEDSGWTNIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y F+ D L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD
Sbjct: 285 YEFKVTDALITNFHLPQSTLIMLVSALSERERVLNAYEIAVREKYRFFSFGD 336
>gi|168491320|ref|ZP_02715463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC0288-04]
gi|183574488|gb|EDT95016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC0288-04]
Length = 342
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|325266040|ref|ZP_08132726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kingella
denitrificans ATCC 33394]
gi|324982678|gb|EGC18304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kingella
denitrificans ATCC 33394]
Length = 340
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 208/356 (58%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF LP IA P R S+RL+V N I D DLP ++ + D +V
Sbjct: 1 MHISEFDFHLPEHLIAQNPPAVRGSSRLLVAQHNQP----IEDRHFPDLPNYIATGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKAT-----GGKIEALIERVLDEHTALAHIRSSKSPKAGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L AT+ ++ GE+ + + + G +PLPPYI R P D D Y
Sbjct: 109 --EGSLHATMTER--VGELFKLQFHHRHNVYTLLEEYGALPLPPYIVR--PADDNDDARY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT +LS L G++ VTLHVGAGTF PV+V++ +H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTHEILSALQQKGVEFAEVTLHVGAGTFQPVRVDNIAEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T + + K+RG R+ SVGTTSLR +E+A G ++ G T+IFITPG
Sbjct: 223 HSEWFDVPEATVAKIQAAKARGNRVWSVGTTSLRAIESA-ARSGSLHAGQGDTDIFITPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FR +D L++NFHLPKSTLLMLVSAF G E +++Y+HAI YRF+SYGD LL
Sbjct: 282 YTFRVIDGLITNFHLPKSTLLMLVSAFAGSERIREIYRHAIEQEYRFFSYGDAMLL 337
>gi|228941586|ref|ZP_04104134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228974515|ref|ZP_04135082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228785232|gb|EEM33244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228818093|gb|EEM64170.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 354
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETATLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|30264488|ref|NP_846865.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Ames]
gi|42783549|ref|NP_980796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10987]
gi|47529946|ref|YP_021295.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. 'Ames Ancestor']
gi|47566608|ref|ZP_00237430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9241]
gi|49187308|ref|YP_030560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Sterne]
gi|49481504|ref|YP_038468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|165871981|ref|ZP_02216622.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0488]
gi|167640749|ref|ZP_02399009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0193]
gi|170688656|ref|ZP_02879861.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0465]
gi|177653957|ref|ZP_02935998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0174]
gi|190566984|ref|ZP_03019900.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis Tsiankovskii-I]
gi|196034446|ref|ZP_03101855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus W]
gi|196039272|ref|ZP_03106578.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus NVH0597-99]
gi|206976063|ref|ZP_03236973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus H3081.97]
gi|217961909|ref|YP_002340479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH187]
gi|218905613|ref|YP_002453447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH820]
gi|227817196|ref|YP_002817205.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CDC 684]
gi|228929463|ref|ZP_04092484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228935738|ref|ZP_04098551.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228948132|ref|ZP_04110416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228987671|ref|ZP_04147783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229123959|ref|ZP_04253151.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 95/8201]
gi|229141157|ref|ZP_04269698.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST26]
gi|229158033|ref|ZP_04286104.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 4342]
gi|229602726|ref|YP_002868704.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0248]
gi|254684173|ref|ZP_05148033.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CNEVA-9066]
gi|254736520|ref|ZP_05194226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Western North America USA6153]
gi|254741558|ref|ZP_05199245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Kruger B]
gi|254751343|ref|ZP_05203380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Vollum]
gi|254757675|ref|ZP_05209702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Australia 94]
gi|301055926|ref|YP_003794137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis CI]
gi|38372450|sp|Q81LH1|QUEA_BACAN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81568824|sp|Q730B3|QUEA_BACC1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81613565|sp|Q6HDA8|QUEA_BACHK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736730|sp|B7JQ04|QUEA_BACC0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736733|sp|B7HQH7|QUEA_BACC7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764263|sp|C3P9A5|QUEA_BACAA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764264|sp|C3L6U7|QUEA_BACAC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|30259146|gb|AAP28351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Ames]
gi|42739478|gb|AAS43404.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10987]
gi|47505094|gb|AAT33770.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. 'Ames Ancestor']
gi|47556638|gb|EAL14970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9241]
gi|49181235|gb|AAT56611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Sterne]
gi|49333060|gb|AAT63706.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|164712271|gb|EDR17807.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0488]
gi|167511321|gb|EDR86707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0193]
gi|170667342|gb|EDT18100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0465]
gi|172081012|gb|EDT66090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0174]
gi|190561975|gb|EDV15944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis Tsiankovskii-I]
gi|195992988|gb|EDX56947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus W]
gi|196029899|gb|EDX68500.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus NVH0597-99]
gi|206745815|gb|EDZ57212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus H3081.97]
gi|217063781|gb|ACJ78031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH187]
gi|218540066|gb|ACK92464.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH820]
gi|227005653|gb|ACP15396.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CDC 684]
gi|228625486|gb|EEK82242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 4342]
gi|228642320|gb|EEK98610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST26]
gi|228659261|gb|EEL14909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 95/8201]
gi|228772056|gb|EEM20510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228811490|gb|EEM57827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228823976|gb|EEM69795.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228830251|gb|EEM75867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|229267134|gb|ACQ48771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0248]
gi|300378095|gb|ADK06999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus biovar anthracis str. CI]
Length = 350
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|29375455|ref|NP_814609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis V583]
gi|227520114|ref|ZP_03950163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0104]
gi|227554979|ref|ZP_03985026.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis HH22]
gi|229546713|ref|ZP_04435438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1322]
gi|229548806|ref|ZP_04437531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis ATCC 29200]
gi|255971322|ref|ZP_05421908.1| queuosine biosynthesis protein [Enterococcus faecalis T1]
gi|255973941|ref|ZP_05424527.1| queuosine biosynthesis protein [Enterococcus faecalis T2]
gi|256617740|ref|ZP_05474586.1| queuosine biosynthesis protein [Enterococcus faecalis ATCC 4200]
gi|256761626|ref|ZP_05502206.1| queuosine biosynthesis protein [Enterococcus faecalis T3]
gi|256854284|ref|ZP_05559648.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis T8]
gi|256957271|ref|ZP_05561442.1| queuosine biosynthesis protein [Enterococcus faecalis DS5]
gi|256959995|ref|ZP_05564166.1| queuosine biosynthesis protein [Enterococcus faecalis Merz96]
gi|256964309|ref|ZP_05568480.1| queuosine biosynthesis protein [Enterococcus faecalis HIP11704]
gi|257077755|ref|ZP_05572116.1| queuosine biosynthesis protein [Enterococcus faecalis JH1]
gi|257083784|ref|ZP_05578145.1| queuosine biosynthesis protein [Enterococcus faecalis Fly1]
gi|257086209|ref|ZP_05580570.1| queuosine biosynthesis protein [Enterococcus faecalis D6]
gi|257089281|ref|ZP_05583642.1| queuosine biosynthesis protein [Enterococcus faecalis CH188]
gi|257418465|ref|ZP_05595459.1| queuosine biosynthesis protein [Enterococcus faecalis T11]
gi|257421116|ref|ZP_05598106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis X98]
gi|293383747|ref|ZP_06629654.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis R712]
gi|293388778|ref|ZP_06633271.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis S613]
gi|294781281|ref|ZP_06746627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis PC1.1]
gi|307267946|ref|ZP_07549334.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4248]
gi|307271868|ref|ZP_07553136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0855]
gi|307277297|ref|ZP_07558399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2134]
gi|307278436|ref|ZP_07559511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0860]
gi|307286677|ref|ZP_07566763.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0109]
gi|307292452|ref|ZP_07572306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0411]
gi|312904428|ref|ZP_07763588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0635]
gi|312907038|ref|ZP_07766034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 512]
gi|312952863|ref|ZP_07771724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0102]
gi|312978705|ref|ZP_07790432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 516]
gi|46576997|sp|Q837H2|QUEA_ENTFA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|29342915|gb|AAO80679.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis V583]
gi|227072458|gb|EEI10421.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0104]
gi|227175888|gb|EEI56860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis HH22]
gi|229306035|gb|EEN72031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis ATCC 29200]
gi|229308173|gb|EEN74160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1322]
gi|255962340|gb|EET94816.1| queuosine biosynthesis protein [Enterococcus faecalis T1]
gi|255966813|gb|EET97435.1| queuosine biosynthesis protein [Enterococcus faecalis T2]
gi|256597267|gb|EEU16443.1| queuosine biosynthesis protein [Enterococcus faecalis ATCC 4200]
gi|256682877|gb|EEU22572.1| queuosine biosynthesis protein [Enterococcus faecalis T3]
gi|256709844|gb|EEU24888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis T8]
gi|256947767|gb|EEU64399.1| queuosine biosynthesis protein [Enterococcus faecalis DS5]
gi|256950491|gb|EEU67123.1| queuosine biosynthesis protein [Enterococcus faecalis Merz96]
gi|256954805|gb|EEU71437.1| queuosine biosynthesis protein [Enterococcus faecalis HIP11704]
gi|256985785|gb|EEU73087.1| queuosine biosynthesis protein [Enterococcus faecalis JH1]
gi|256991814|gb|EEU79116.1| queuosine biosynthesis protein [Enterococcus faecalis Fly1]
gi|256994239|gb|EEU81541.1| queuosine biosynthesis protein [Enterococcus faecalis D6]
gi|256998093|gb|EEU84613.1| queuosine biosynthesis protein [Enterococcus faecalis CH188]
gi|257160293|gb|EEU90253.1| queuosine biosynthesis protein [Enterococcus faecalis T11]
gi|257162940|gb|EEU92900.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis X98]
gi|291078823|gb|EFE16187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis R712]
gi|291081935|gb|EFE18898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis S613]
gi|294451617|gb|EFG20073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis PC1.1]
gi|295113928|emb|CBL32565.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Enterococcus sp. 7L76]
gi|306496483|gb|EFM66046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0411]
gi|306502155|gb|EFM71439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0109]
gi|306504942|gb|EFM74137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0860]
gi|306506004|gb|EFM75172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2134]
gi|306511374|gb|EFM80376.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0855]
gi|306515587|gb|EFM84114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4248]
gi|310627023|gb|EFQ10306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 512]
gi|310629166|gb|EFQ12449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0102]
gi|310632255|gb|EFQ15538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0635]
gi|311288412|gb|EFQ66968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 516]
gi|315027055|gb|EFT38987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2137]
gi|315029030|gb|EFT40962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4000]
gi|315032349|gb|EFT44281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0017]
gi|315034393|gb|EFT46325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0027]
gi|315148027|gb|EFT92043.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4244]
gi|315149629|gb|EFT93645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0012]
gi|315153155|gb|EFT97171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0031]
gi|315155173|gb|EFT99189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0043]
gi|315157708|gb|EFU01725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0312]
gi|315165057|gb|EFU09074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1302]
gi|315167869|gb|EFU11886.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1341]
gi|315171772|gb|EFU15789.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1342]
gi|315174888|gb|EFU18905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1346]
gi|315574093|gb|EFU86284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0309B]
gi|315577222|gb|EFU89413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0630]
gi|315581758|gb|EFU93949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0309A]
gi|323480051|gb|ADX79490.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis 62]
gi|327534451|gb|AEA93285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis OG1RF]
Length = 343
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V
Sbjct: 2 LSTEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---MEDKHFHDILDELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI K +D D Y
Sbjct: 112 -GDGRLKAVVKEELEHGGRIIEFKYDGIFLEILESL-GEMPLPPYI--KERLDDPDR--Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H M
Sbjct: 166 QTVYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD
Sbjct: 286 GYQFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGD 338
>gi|315641796|ref|ZP_07896800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus italicus DSM 15952]
gi|315482471|gb|EFU73010.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus italicus DSM 15952]
Length = 343
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+V+ ++D ++ LN+ DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLTDRASSRLLVLDRKTKE---MADKHFYEIIDELNAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L GV+ + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGVK----EETGAHLELLLLNNTEGDTWETLIKPAKRAKVGTEITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ + G ++ F GI LE SL G +PLPPYI + R Y
Sbjct: 112 -GDGRLKAIVEEELDHGGRMIRFVYEGIFLEILESL-GEMPLPPYIKERLEDPER----Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +H M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTKELLEKIQAKGVHLVYLTLHVGLGTFRPVSVDNIAEHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +V+ GGRIV+VGTTS+R LET T+ DG I SG+TNIFI P
Sbjct: 226 HSEFYRLTQEAADELTAVRDAGGRIVAVGTTSIRTLETIGTKFDGAIQADSGWTNIFIKP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD
Sbjct: 286 GYQFKLVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDEKYRFFSFGD 338
>gi|218236041|ref|YP_002369227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus B4264]
gi|228910254|ref|ZP_04074072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 200]
gi|229048127|ref|ZP_04193698.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH676]
gi|229111890|ref|ZP_04241436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-15]
gi|296504909|ref|YP_003666609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis BMB171]
gi|226736732|sp|B7HE52|QUEA_BACC4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218163998|gb|ACK63990.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus B4264]
gi|228671646|gb|EEL26944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-15]
gi|228723230|gb|EEL74604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH676]
gi|228849418|gb|EEM94254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 200]
gi|296325961|gb|ADH08889.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis BMB171]
Length = 350
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|52141088|ref|YP_085741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus E33L]
gi|81686089|sp|Q634C6|QUEA_BACCZ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51974557|gb|AAU16107.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus cereus E33L]
Length = 350
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 208/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLQGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|30022493|ref|NP_834124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 14579]
gi|229129698|ref|ZP_04258666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-Cer4]
gi|38372443|sp|Q817W5|QUEA_BACCR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|29898051|gb|AAP11325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 14579]
gi|228653815|gb|EEL09685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-Cer4]
Length = 350
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKQNGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|309388952|gb|ADO76832.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Halanaerobium praevalens DSM 2228]
Length = 347
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 213/362 (58%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EF++ LP IA +P+ RD +RLMV++P +I +++ +L +L+ D I+
Sbjct: 1 MKVEEFNYQLPEELIAQKPLSKRDESRLMVLNPEQQ---IIEENIFKNLKEYLDPGDMII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + I L +S W V RP + KKG + F
Sbjct: 58 MNNSRVIPARLYGAKIPTGTE----IELLLLNELSEGRWEVLVRPGRRAKKGVKIKF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSI--SGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q LEA V++ + G ++ FS E ++ +G +PLPPYI K R
Sbjct: 111 --QDILEAEVVEYTDFGGRIVEFSWDHKKYNFEEVLNQLGEMPLPPYINEKLDDPER--- 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K +GS AAPTAGLHFT +LL L GI + ++TLHVG GTF PVK E+ ++H
Sbjct: 166 -YQTVYSKKRGSAAAPTAGLHFTDSLLKELEEYGIILDYITLHVGLGTFRPVKSENIEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E I A TA + VK++G ++V+VGTT R LE+A +G ++ + G+T+IFI
Sbjct: 225 EMHEEYAEISAETAAKIKKVKTQGNKVVAVGTTVTRTLESAAA-NGELSEYQGWTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ +D L++NFHLPKSTLLMLVSA G E YQ A+ YRF+S GD L+
Sbjct: 284 PGYEFKVIDSLITNFHLPKSTLLMLVSALAGKELVLSAYQKAVEKEYRFFSLGDAMLILN 343
Query: 359 KR 360
++
Sbjct: 344 RK 345
>gi|148985629|ref|ZP_01818783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP3-BS71]
gi|148993024|ref|ZP_01822618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP9-BS68]
gi|168489581|ref|ZP_02713780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP195]
gi|147922110|gb|EDK73232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP3-BS71]
gi|147928225|gb|EDK79242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP9-BS68]
gi|183571952|gb|EDT92480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP195]
gi|301800281|emb|CBW32901.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae OXC141]
gi|332073723|gb|EGI84202.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA17570]
Length = 342
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGE---MQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|228981109|ref|ZP_04141410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis Bt407]
gi|228778650|gb|EEM26916.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis Bt407]
gi|326942199|gb|AEA18095.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 350
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETATLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|257866741|ref|ZP_05646394.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC30]
gi|257872742|ref|ZP_05652395.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC10]
gi|257800699|gb|EEV29727.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC30]
gi|257806906|gb|EEV35728.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC10]
Length = 343
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV D ++ L DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLSDRSSSRLLVVDRETGK---FEDKHFYNIIDELAPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + ++W +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V ++ + G ++ F GI LE SL G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEEELDHGGRIIRFQYKGIFLEILESL-GEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 286 GYQFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|15901270|ref|NP_345874.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TIGR4]
gi|111658609|ref|ZP_01409266.1| hypothetical protein SpneT_02000284 [Streptococcus pneumoniae
TIGR4]
gi|225860804|ref|YP_002742313.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Taiwan19F-14]
gi|298229585|ref|ZP_06963266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae str. Canada MDR_19F]
gi|298255442|ref|ZP_06979028.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502633|ref|YP_003724573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TCH8431/19A]
gi|21263901|sp|Q97Q15|QUEA_STRPN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|14972905|gb|AAK75514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TIGR4]
gi|225726590|gb|ACO22441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Taiwan19F-14]
gi|298238228|gb|ADI69359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TCH8431/19A]
Length = 342
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|261405411|ref|YP_003241652.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. Y412MC10]
gi|261281874|gb|ACX63845.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. Y412MC10]
Length = 343
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 210/359 (58%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ IS +D+ LN D +V
Sbjct: 1 MNVDLYDFELPEHLIAQTPLLDRSSSRLLTLNKKSGQ---ISHQTFADIIDSLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + E L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEKEDTGAKAE----VLLLKNMGEDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K +D RD Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYIKEK--LDDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDQVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ ++ SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQLKGEPLHESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMHAYKEAVDKEYRFFSFGDAMFIY 343
>gi|322385861|ref|ZP_08059504.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus cristatus ATCC 51100]
gi|321270146|gb|EFX53063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus cristatus ATCC 51100]
Length = 342
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RDS+RL++V SD ++ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDSSRLLIVDRETGQ---FSDQHFDNIIDQLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGTK----PETGGHVELLLLKNTQGDFWEVLAKPAKRLRVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVTEELEHGGRIVRFDYQGIFLEVLESL-GEMPLPPYIHEK----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLDKIAAKGVKLVYLTLHVGLGTFRPVSVDNLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ L VK+ G RI++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAETLRQVKASGHRIIAVGTTSIRTLETIGSKFEGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+++ VD +NFHLPKSTL+MLVSAF G + T + Y++AI+ YRF+S+GD
Sbjct: 285 GYQWKIVDAFSTNFHLPKSTLVMLVSAFAGRQLTLEAYEYAIAERYRFFSFGD 337
>gi|114326953|ref|YP_744110.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulibacter bethesdensis CGDNIH1]
gi|114315127|gb|ABI61187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulibacter bethesdensis CGDNIH1]
Length = 361
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 212/361 (58%), Gaps = 22/361 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +F FDLPP RIA P PR+SARL+ V + DH + DLP L D +V N
Sbjct: 8 IADFTFDLPPERIAHEPARPRESARLLHVPAGEEG---VHDHHIRDLPDLLRPGDVLVAN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI AQL R + I TL+ + SW V AR ++ ++ GD L F D
Sbjct: 65 DTRVIPAQLTAWRG------QARIGLTLNRPLPDGSWHVLARNARRLRAGDRLRFTEHDT 118
Query: 123 QSR-------LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
QS L A V+ + G +L F + + ++ G + LPPYI R + A+
Sbjct: 119 QSTHTQPTGMLAAEVVARDEDGGAILRFVAE--DFDAALAQYGALALPPYIDRPQGPTAQ 176
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A+ +G+VAAPTAGLHFT LL RL + GI+ +TLHVGAGTF+P++ +
Sbjct: 177 DAKDYQTVFARHRGAVAAPTAGLHFTPALLDRLAAKGIERVTITLHVGAGTFLPMRDDTI 236
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+ H +H+E G I A +N+ K R+++VGTTSLRLLE+A G + P+ T+I
Sbjct: 237 EAHRLHAERGVITPEAASRINAAK----RVIAVGTTSLRLLESAADAAGGVRPFDAETDI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG+RFR L++NFHLP+STL MLV AF G + Y +AI+ AYRFYSYGD L
Sbjct: 293 FIKPGHRFRTAHALLTNFHLPRSTLFMLVCAFAGTARMRAAYAYAIAEAYRFYSYGDACL 352
Query: 356 L 356
+
Sbjct: 353 I 353
>gi|15892206|ref|NP_359920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
conorii str. Malish 7]
gi|21263890|sp|Q92IY7|QUEA_RICCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|15619340|gb|AAL02821.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
conorii str. Malish 7]
Length = 365
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 228/387 (58%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ P+ + + D +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLIA---VTPPIKTKFYNIID---YLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S ++WS +A+P++ + D +F +
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDNWSAFAKPARKLHVNDEFYFDNH 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 106 ------KVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 DARDYVD--------------------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
++ Y++ YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE++ +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLESSCN-NGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|269215268|ref|ZP_05988032.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ATCC 23970]
gi|269207922|gb|EEZ74377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ATCC 23970]
Length = 356
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 209/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++S + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMS----LQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVTAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMIL 348
>gi|229019642|ref|ZP_04176452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1273]
gi|229025880|ref|ZP_04182276.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1272]
gi|228735432|gb|EEL86031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1272]
gi|228741645|gb|EEL91835.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1273]
Length = 350
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAVLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|228475167|ref|ZP_04059893.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis SK119]
gi|314936247|ref|ZP_07843594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis subsp. hominis C80]
gi|228270778|gb|EEK12180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis SK119]
gi|313654866|gb|EFS18611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis subsp. hominis C80]
Length = 341
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+ LP S IA P+ RD +RL+V+ I+ +D+ + + D +V
Sbjct: 1 MNVEEFDYHLPESLIAQTPLKNRDQSRLLVLGRKTGN---IAHKHFTDIMDYFETGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + R+ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTRIEDNDWEVLLKPAKRIKVGNTLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + G ++ GI LE ++ +G +PLPPYI K +D D Y
Sbjct: 111 -GNGKIIAECIKELEQGGRIMRLHFEGI-LEERLDELGEMPLPPYI--KERLDDPDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + F+TLHVG GTF PV VED +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTDELLQKIKDKGVNIAFITLHVGLGTFRPVSVEDINDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTKETADILNKTKENGHRIISVGTTSTRTLETIRRDHEQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++A+D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYKEAVKLKYRFFSFGDAMLI 340
>gi|34580774|ref|ZP_00142254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
sibirica 246]
gi|28262159|gb|EAA25663.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
sibirica 246]
Length = 365
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 227/387 (58%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ P+ + + D +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLIA---VTPPIKTKFYNIID---YLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S +SWS +A+P++ + D +F +
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYFDNH 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 106 ------KVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 DARDYVD--------------------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
++ Y++ YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKAYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTADIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE++ +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLESSCN-NGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|307706877|ref|ZP_07643679.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK321]
gi|307617750|gb|EFN96915.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK321]
Length = 342
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 212/358 (59%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V N + +H S + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIV--NRETGEMQDNHFHS-IIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK G R+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGSRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + YQHAI+ YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYQHAINERYRFFSFGDAMFIY 342
>gi|297584755|ref|YP_003700535.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
selenitireducens MLS10]
gi|297143212|gb|ADH99969.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
selenitireducens MLS10]
Length = 351
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD++LP IA P+ R+ +RL+V+ +S S + LN DA+V
Sbjct: 1 MDVSAFDYELPEELIAQTPLKNREESRLLVMERTTGD---LSHQTFSSVIDHLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G++ +I L + W +P+K +KKG ++ F
Sbjct: 58 LNDTKVIPARLFGIK----KETGAKIEVLLLKEQDDHVWEALVKPAKRLKKGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A + G LL FS G+ ER + +G +PLPPYI + +D +D Y
Sbjct: 111 -GEGVLQAECTGELPEGRRLLRFSFDGVFHER-LDDLGEMPLPPYIQEQ--LDEKDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA +GS AAPTAGLHFT +LL ++ + GI+ F+TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAANRGSAAAPTAGLHFTPDLLEKIRAKGIRTVFLTLHVGLGTFRPVSVDTVEDHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E +A+AL ++RGGRI++VGTTS R LET + SG+T+IFI PG
Sbjct: 225 HAEFYQFSEASARALRETRARGGRIIAVGTTSARTLETIVRDHDDFAAASGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFQGIDGLLTNFHLPKSTLVMLVSAFSKREFVLDAYREAVRERYRFFSFGDAMLI 340
>gi|73662428|ref|YP_301209.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|91207328|sp|Q49Y78|QUEA_STAS1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|72494943|dbj|BAE18264.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 341
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FD+ LP + IA P+ RD +RL+++ I D+ +LN D +V
Sbjct: 1 MDIEAFDYHLPEALIAQTPLKNRDESRLLILGRQSGY---IEHKHFKDVTDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGMK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I++ + G ++ GI L+ ++ +G +PLPPYI K +D D Y
Sbjct: 111 -GEGKIIAECIEELDQGGRIMRLHYDGI-LQERLDELGEMPLPPYI--KERLD--DQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL R+ + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKASGSAAAPTAGLHFTDELLERIKAQGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA LNS + G RI+SVGTTS R LET SG+T+IFI PG
Sbjct: 225 HSEYYQMDEATANLLNSTRDNGNRIISVGTTSTRTLETIMQSSDRFVAKSGWTDIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A++ YRF+S+GD L+
Sbjct: 285 FNFKAIDGLITNFHLPKSTLVMLVSAFSSRDYIINAYNQAVASEYRFFSFGDAMLI 340
>gi|229071926|ref|ZP_04205137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus F65185]
gi|228711222|gb|EEL63186.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus F65185]
Length = 350
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNAAVKEKYRFFSFGD 337
>gi|300859629|ref|ZP_07105717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TUSoD Ef11]
gi|300850447|gb|EFK78196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TUSoD Ef11]
gi|315145163|gb|EFT89179.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2141]
gi|315163072|gb|EFU07089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0645]
Length = 343
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV+ D D+ L DA+V
Sbjct: 2 LSTEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---TEDKHFHDILDELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI K +D D Y
Sbjct: 112 -GDGRLKAVVKEELEHGGRIIEFKYDGIFLEILESL-GEMPLPPYI--KERLDDPDR--Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H M
Sbjct: 166 QTVYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD
Sbjct: 286 GYQFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGD 338
>gi|220916512|ref|YP_002491816.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter dehalogenans 2CP-1]
gi|254764262|sp|B8JH48|QUEA_ANAD2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219954366|gb|ACL64750.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 345
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 156/359 (43%), Positives = 209/359 (58%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P + +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPEEGSP---AHRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + C W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS--GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLTF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG LEA V D G + G ELE + G IPLPPYI +R DA D Y
Sbjct: 113 DG---LEARVDDVEGEGFYRVTLDRQGPELEAALGRAGRIPLPPYI--RRAPDAEDAARY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT LL+RL + GI+ VTLHVG GTF+P++ +D D H M
Sbjct: 168 QTIWARAPGSAAAPTAGLHFTEPLLARLAARGIRRTAVTLHVGPGTFLPIRGDDLDLHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A L + ++RGGRIV+VGTTS+R LE+A DG + G T +FI PG
Sbjct: 228 HGERYEVSPAAAAELAATRARGGRIVAVGTTSVRTLESA-WRDGAVAAGPGRTELFIRPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ F AVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD LL ++
Sbjct: 287 HPFHAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLLLRR 345
>gi|295109865|emb|CBL23818.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus obeum A2-162]
Length = 341
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 204/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RL+ H ++ H +D+ +L D +V
Sbjct: 1 MKTSDFYYDLPKELIAQDPLEDRSSSRLL--HLSMEDGSFEHRHF-TDILDYLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G H I L R + W +P K + G + F
Sbjct: 58 INDTRVIPARLYG----HKEETGALIEILLLKRKENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGILTGEIIDIVDEGNRLIQFHYDGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ ++ G+K+ VTLHVG GTF PVKV++ + H M
Sbjct: 165 QTVYAKNDGSAAAPTAGLHFTKELMKQVEEKGVKIAHVTLHVGLGTFRPVKVDNVESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+AT E+GI++ SG+T IFI PG
Sbjct: 225 HSEFYMVEEDQAKLINDTKKNGGRVISVGTTSCRTLESATDENGILHAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKMIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMLIL 341
>gi|210622017|ref|ZP_03292960.1| hypothetical protein CLOHIR_00906 [Clostridium hiranonis DSM 13275]
gi|210154462|gb|EEA85468.1| hypothetical protein CLOHIR_00906 [Clostridium hiranonis DSM 13275]
Length = 350
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 145/352 (41%), Positives = 198/352 (56%), Gaps = 16/352 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F+FDLP IA P+ R ++RLMV+ I + D+ +L D +V N+T
Sbjct: 14 DFNFDLPQELIAQTPIEDRSASRLMVLDKETG---EIEHKIFRDIKEYLKPGDCLVLNDT 70
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + I L R + ++W +P K K G F G
Sbjct: 71 RVIPARLIGEKVDTGGK----IEFLLLKRNTDDTWESLVKPGKRAKIGTKFSF----GGG 122
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+L V+ + G ++ F GI E + +G +PLPPYI K R YQT Y
Sbjct: 123 KLIGEVVGMADEGARIIKFHYDGI-FEEILDELGNMPLPPYITEKLEEKER----YQTVY 177
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
+K GS AAPTAGLHFT+ LL + +G+ + FVTLHVG GTF PVKV+D +H MHSE
Sbjct: 178 SKHNGSAAAPTAGLHFTNELLEEIKEMGVDIAFVTLHVGLGTFRPVKVDDVLNHEMHSEF 237
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A +N K G R++ VGTTS R +E+A EDG + SG+TNIFI PGY+F+
Sbjct: 238 YMVTQEAADKINKAKENGNRVICVGTTSCRTIESAAEEDGHMTAKSGWTNIFIYPGYKFK 297
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+D L++NFHLP+STL+MLVSA CG E Y AI YRF+S+GD +
Sbjct: 298 VLDNLITNFHLPESTLIMLVSALCGREHVLNAYNEAIKERYRFFSFGDAMFI 349
>gi|322377318|ref|ZP_08051809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M334]
gi|321281518|gb|EFX58527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M334]
Length = 342
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGKMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VG+TS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAVTLRSVKENGGRVIAVGSTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|329926750|ref|ZP_08281158.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. HGF5]
gi|328938950|gb|EGG35318.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. HGF5]
Length = 343
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 209/359 (58%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ IS +D+ LN D +V
Sbjct: 1 MNVDLYDFELPEHLIAQTPLLDRSSSRLLTLNKESGQ---ISHQTFADIIDSLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + E L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEKEDTGAKAE----VLLLKNMGEDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K +D RD Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYIKEK--LDDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDQVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ + SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQLKGEPLRESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMHAYKEAVDKEYRFFSFGDAMFIY 343
>gi|222097863|ref|YP_002531920.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Q1]
gi|254764266|sp|B9IYZ2|QUEA_BACCQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221241921|gb|ACM14631.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus cereus Q1]
Length = 350
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDPGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|160880412|ref|YP_001559380.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium phytofermentans ISDg]
gi|189038516|sp|A9KK69|QUEA_CLOPH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|160429078|gb|ABX42641.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium phytofermentans ISDg]
Length = 364
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 202/365 (55%), Gaps = 21/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+V+ N ++ H+ ++ +L D +V
Sbjct: 1 MKKQDFYFDLPEELIAQDPLEDRSGSRLLVLDKNTG---KVTHHIFKEIVKYLKKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCH---------INRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
NNTKVI A+L G R + I L R + W RP K K
Sbjct: 58 LNNTKVIPARLMGERIIEKTPLAPGHSYGKEGTPIELLLLKRKPDDVWETLVRPGKKAKV 117
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
G + F G +L +ID G L+ F+ GI E + +G +PLPPYI +
Sbjct: 118 GTKISF----GDGKLIGEIIDVVEEGNRLVKFTYQGI-FEEILDELGQMPLPPYITHELA 172
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
R YQT YAK +GS AAPTAGLHFT+ LL ++ +G+ + VTLHVG GTF PVK
Sbjct: 173 DKNR----YQTVYAKHEGSAAAPTAGLHFTNELLKQIEDMGVVIANVTLHVGLGTFRPVK 228
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+D DH MHSE+ ++ A+ +N K GGRI+ VGTTS R +E+A EDG + SG
Sbjct: 229 EDDILDHHMHSEVYQVEESEAKKINDAKRAGGRIICVGTTSCRTIESAANEDGFVQAKSG 288
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PGY+F+ ++ L++NFHLP+STLLMLVSA E Y+ A+ YRF+S+G
Sbjct: 289 ATEIFIYPGYKFKVLNCLITNFHLPESTLLMLVSALASREHIIAAYEEAVKERYRFFSFG 348
Query: 352 DTSLL 356
D +
Sbjct: 349 DAMFI 353
>gi|313669079|ref|YP_004049363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ST-640]
gi|313006541|emb|CBN88005.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria lactamica 020-06]
Length = 346
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ PL D + DLP ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDM--PL--QDRVFGDLPDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLCFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ H YRF+SYGD +L
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEHEYRFFSYGDAMIL 338
>gi|194290672|ref|YP_002006579.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
taiwanensis LMG 19424]
gi|238692773|sp|B3R6J3|QUEA_CUPTR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193224507|emb|CAQ70518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
taiwanensis LMG 19424]
Length = 355
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 154/363 (42%), Positives = 214/363 (58%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH---PNLSCPLV-ISDHLVSDLPAFLNSN 56
+ + +FDF LPP IA + R ++RL+VV P + V ++D SD+ +L +
Sbjct: 2 LTLSDFDFPLPPELIAQSALPDRSASRLLVVERLAPGDTADAVHMADRAFSDIVDYLRPD 61
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+VI A RF ++ + + ++ R SK +G LH
Sbjct: 62 DLLVFNDTRVIKA-----RFFGHKPSGGKVEVLVERVLDTHTVLAQVRASKTPVEGSALH 116
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ D + +D++ T L F ++L I G +PLPPYI DA D
Sbjct: 117 L-ADDAFAVTVGPRVDQFFT----LRFPEPALDL---IERYGRLPLPPYITHD--PDAYD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF L +RL + G++ F+TLHVGAGTF PV+ E+
Sbjct: 167 ETRYQTVYARSPGAVAAPTAGLHFDDALFARLDAAGVRRAFLTLHVGAGTFQPVRTENLA 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE I AQA+ ++RGGR+++VGTTSLR LE+A DG + SG T+IF
Sbjct: 227 EHKMHSEWYAISEDLAQAVRETRARGGRVIAVGTTSLRALESAAQPDGTLAAGSGDTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSA G++ + Y+HA+ YRF+SYGD LL
Sbjct: 287 ITPGYRFRLVDALITNFHLPKSTLLMLVSALAGVQAIRAAYRHAVEQRYRFFSYGDAMLL 346
Query: 357 FQK 359
++
Sbjct: 347 TRQ 349
>gi|325567162|ref|ZP_08143829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus casseliflavus ATCC 12755]
gi|325158595|gb|EGC70741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus casseliflavus ATCC 12755]
Length = 343
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF+LP IA P+ R S+RL+VV D ++ L DA+V
Sbjct: 2 LTTEDFDFELPEELIAQTPLSDRSSSRLLVVDRETGK---FEDKHFYNIIDELEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + ++W +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V ++ + G ++ F GI LE SL G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEEELDHGGRIIRFQYKGIFLEILESL-GEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 286 GYQFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|229032069|ref|ZP_04188051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1271]
gi|228729261|gb|EEL80256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1271]
Length = 350
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKESGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|331085363|ref|ZP_08334449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 9_1_43BFAA]
gi|330408146|gb|EGG87636.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 9_1_43BFAA]
Length = 341
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+FDLP IA P+ R S+RL+V+ H+ ++ +L D +V
Sbjct: 1 MRKEDFNFDLPEELIAQDPLEDRSSSRLLVLDKETGK---TEHHVFREIIEYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKIG----TDAKIEVLLLKRKENDVWETLVKPGKKAKIGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GDGLLVGEVVDIVEEGNRLIHFEYEGI-FEEILDRLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLKKIEEKGVQIARVTLHVGLGTFRPVKVDNILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N+ K+ G R+++VGTTS R +E+A EDG I P SG+T+IFI PG
Sbjct: 225 HSEFYQIEEEAAEKINTAKANGKRVIAVGTTSCRTIESAVKEDGTIAPVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD +
Sbjct: 285 YQFKVLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIKERYRFFSFGDAMFI 340
>gi|309379474|emb|CBX21840.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 346
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++S + D + DLP ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMS----LQDRVFGDLPDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 338
>gi|229163366|ref|ZP_04291318.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus R309803]
gi|228620147|gb|EEK77021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus R309803]
Length = 354
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLM++ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMMLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGMADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|168486111|ref|ZP_02710619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1087-00]
gi|183570814|gb|EDT91342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1087-00]
Length = 342
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFYGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGCELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|238917266|ref|YP_002930783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
eligens ATCC 27750]
gi|238872626|gb|ACR72336.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
eligens ATCC 27750]
Length = 343
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 205/356 (57%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R S+RLMV+ I + D+ +L D +V
Sbjct: 1 MDLHDFYYDLPEELIAQDPLSDRSSSRLMVLDKETGE---IEHKIFRDIVDYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + E+ + ++W V +P K K G + F
Sbjct: 58 VNDTKVIPARLIGTKAD--TGATIEVLLLKRLEDRQDTWEVLVKPGKKAKVGAKISF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L +ID G L+ F+ GI E + +G +PLPPYI K D Y
Sbjct: 113 -GEGKLIGEIIDIVEEGNRLIQFTYDGI-FEEILDELGQMPLPPYITHK----LEDKNRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ ++G+ + VTLHVG GTF PVKVE+ DH M
Sbjct: 167 QTVYAKHEGSAAAPTAGLHFTTELLEKIKAMGVNIARVTLHVGLGTFRPVKVENILDHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ + GGR+++VGTTS R LE+ EDG I SG+T IFI PG
Sbjct: 227 HSEFYVVTQEAADMINNTRKNGGRVIAVGTTSTRTLESVALEDGTIPAKSGWTEIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 287 YKFKAIDCLITNFHLPESTLVMLVSALAGREHVLHAYEVAVQEKYRFFSFGDAMFI 342
>gi|255658191|ref|ZP_05403600.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mitsuokella
multacida DSM 20544]
gi|260849499|gb|EEX69506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mitsuokella
multacida DSM 20544]
Length = 368
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ +FD+DLP RIA P+ PR+++RLMV+ P I DL FL D ++
Sbjct: 1 MLLSDFDYDLPEERIAQVPIEPRNASRLMVLDP---VTKEIEHRHFYDLKEFLEPGDTLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L G H ++ + L R+ N W +P K K G+++ F +
Sbjct: 58 FNDTRVMPARLIG----HRDQTGGRVEVFLLRRLDANHWETLVKPGKKAKPGNVIRFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L TV + + G ++ F GI E + +G PLPPYI K D Y
Sbjct: 114 -----LSCTVTEHTDFGGRIVEFHYDGI-FEEILDRLGETPLPPYIHEK----LEDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT + L +G+ + FVTLHVG GTF PV VE+ ++H M
Sbjct: 164 QTVYNREEGSAAAPTAGLHFTKEQMQELREMGVNLGFVTLHVGLGTFRPVNVENIEEHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA+ + K G R+++VGTTS+R LE+A T I SG+T IFI PG
Sbjct: 224 HKEYYCIPDETAKLIMDTKKAGHRVIAVGTTSIRTLESAATAKNEIAGKSGWTGIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y F+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD + +K+
Sbjct: 284 YDFKIVDAIITNFHLPKSTLIMLISAFAGRNFVLNAYKTAVEMKYRFFSFGDAMFIRRKQ 343
>gi|229198546|ref|ZP_04325249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1293]
gi|228584931|gb|EEK43046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1293]
gi|324328321|gb|ADY23581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 350
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V+ GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVRENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|325660922|ref|ZP_08149549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 4_1_37FAA]
gi|325472429|gb|EGC75640.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 4_1_37FAA]
Length = 341
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+FDLP IA P+ R S+RL+V+ H+ ++ +L + D +V
Sbjct: 1 MRKEDFNFDLPEELIAQDPLEDRSSSRLLVLDKETGK---TEHHVFREIIDYLEAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKIG----TDAKIEVLLLKRKENDVWETLVKPGKKAKIGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GDGLLVGEVVDIVEEGNRLIHFEYEGI-FEEILDRLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLKKIEEKGVQIARVTLHVGLGTFRPVKVDNILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N+ K+ G R+++VGTTS R +E+A EDG I P SG+T+IFI PG
Sbjct: 225 HSEFYQIEEEAAEKINTAKANGKRVIAVGTTSCRTIESAAKEDGTIAPVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD +
Sbjct: 285 YQFKVLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIKERYRFFSFGDAMFI 340
>gi|228917055|ref|ZP_04080614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228842583|gb|EEM87672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 350
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGG---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYEGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|332074997|gb|EGI85469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA41301]
Length = 342
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVS+F G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSSFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|149375025|ref|ZP_01892798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter algicola DG893]
gi|149360914|gb|EDM49365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter algicola DG893]
Length = 364
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 221/361 (61%), Gaps = 34/361 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M V +F FDLP IA P+ R ++RL+ + LS + HL +DLP+ L D +
Sbjct: 1 MNVSDFHFDLPDELIARYPLKERSASRLLSLD-GLSGDI---RHLRFTDLPSLLQPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
VFN+T+VI A+L G R+E ++ + + + + R SK +K+G +
Sbjct: 57 VFNDTRVIPARLFG-------RKETGGQVEVLVERVLGEHDILAHVRASKALKEGQKV-- 107
Query: 118 FSQDG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+DG R +A ++ E +L LER +G +PLPPY+ RP
Sbjct: 108 LLEDGTPLRMSGRDDALFHLHCDSDEPVLDV------LER----IGHMPLPPYV--DRPD 155
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D YQT YA+ G+VAAPTAGLHF +L+ L S+G++ FVTLHVGAGTF PV+V
Sbjct: 156 ESSDRERYQTVYAREAGAVAAPTAGLHFDDRILAELESMGVETAFVTLHVGAGTFQPVRV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E +DH+MHSE+ + T A+N+ ++RGGR+V+VGTTS+R LE+A + G++ P+ G
Sbjct: 216 EGIEDHVMHSEVAHVPQATVDAVNAARARGGRVVAVGTTSVRSLESA-SRGGVVRPFQGE 274
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGYRF+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD
Sbjct: 275 TDIFIYPGYRFQTVDAMVTNFHLPESTLIMLVSAFAGYQNVMSAYQAAVAECYRFFSYGD 334
Query: 353 T 353
Sbjct: 335 A 335
>gi|290769980|gb|ADD61747.1| putative protein [uncultured organism]
Length = 343
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 205/356 (57%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R S+RLMV+ I + D+ +L D +V
Sbjct: 1 MDLHDFYYDLPEELIAQDPLSDRSSSRLMVLDKETGE---IEHKIFRDIVDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + E+ + ++W V +P K K G + F
Sbjct: 58 VNDTKVIPARLIGTKAD--TGATIEVLLLKRLEDRQDTWEVLVKPGKKAKVGAKISF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L +ID G L+ F+ GI E + +G +PLPPYI K D Y
Sbjct: 113 -GEGKLIGEIIDIVEEGNRLIQFTYDGI-FEEILDELGQMPLPPYITHK----LEDKNRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ ++G+ + VTLHVG GTF PVKVE+ DH M
Sbjct: 167 QTVYAKHEGSAAAPTAGLHFTTELLEKIKAMGVNIARVTLHVGLGTFRPVKVENILDHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ + GGR+++VGTTS R LE+ EDG I SG+T IFI PG
Sbjct: 227 HSEFYVVTQEAADMINNTRKNGGRVIAVGTTSTRTLESVALEDGTIPAKSGWTEIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 287 YKFKAIDCLITNFHLPESTLVMLVSALAGREHVLHAYEVAVQEKYRFFSFGDAMFI 342
>gi|229586455|ref|YP_002844956.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
africae ESF-5]
gi|259551480|sp|C3PMQ3|QUEA_RICAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|228021505|gb|ACP53213.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
africae ESF-5]
Length = 365
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 228/387 (58%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ P+ + + D +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSRERDNSDLLIA---VTPPIKTKFYNIID---YLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN + I+ L+ ++S +SWS +A+P++ + D +F +
Sbjct: 55 FNNSKVIKAKLN---------LGENITINLNQKLSDDSWSAFAKPARKLHVNDEFYFDNH 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 106 ------KVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 DARDYVD--------------------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
++ Y++ YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAKIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE++ +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLESSCN-NGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|117923911|ref|YP_864528.1| queuosine biosynthesis protein [Magnetococcus sp. MC-1]
gi|259551461|sp|A0L579|QUEA_MAGSM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|117607667|gb|ABK43122.1| Queuosine biosynthesis protein [Magnetococcus sp. MC-1]
Length = 363
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 208/356 (58%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+DLP + IA RP+ PRD ARL+V S + D L L + D +V N
Sbjct: 14 LSHYDYDLPAAHIAQRPMEPRDHARLLV-----SRAQGVEDSRFDQLVEHLQAGDLLVLN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + EI P W R +K +K G + F +D
Sbjct: 69 DTKVIPARLLGHK---PSGGRVEIFLLKPDPQHPPLWRAMTRSNKPLKVGQRVEF-GED- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR-DYVDYQ 181
A ++++ G +L+ G+ L+ + G +PLPPYI+ DA+ D YQ
Sbjct: 124 ---FYAELVERQAEGHVLVALHAVGMGLDEAMQHYGQMPLPPYISGS---DAQQDKSRYQ 177
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTAGLHFT L RL + G+ VTLHVG GTF PV+VED D H MH
Sbjct: 178 TVFARRDGAVAAPTAGLHFTDALFERLAAKGVTWCHVTLHVGLGTFQPVRVEDLDAHPMH 237
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E ++A + K+ GGR+V+VGTT++R LE++ + G++ G T +FI PGY
Sbjct: 238 GEWRQLEADAVAKIQRTKAAGGRVVAVGTTAVRTLESSVDDQGVLQASCGETRLFIRPGY 297
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
RF+ VD++++NFHLPKSTLLMLV+AF G ++ Y HA+ YRFYSYGDT+LL+
Sbjct: 298 RFKVVDLMLTNFHLPKSTLLMLVAAFVGRSRLRRDYAHAMGKNYRFYSYGDTTLLY 353
>gi|228954702|ref|ZP_04116725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228805029|gb|EEM51625.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 350
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|254724656|ref|ZP_05186439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A1055]
Length = 350
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 208/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYGKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|295695631|ref|YP_003588869.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Bacillus
tusciae DSM 2912]
gi|295411233|gb|ADG05725.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Bacillus
tusciae DSM 2912]
Length = 346
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 210/360 (58%), Gaps = 22/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FD+DLPP RIA P R ++RL+V++ + + DL + DA++
Sbjct: 1 MRVEDFDYDLPPDRIAQVPSADRTASRLLVLYRDSGR---MEHRHFRDLVDYAVPGDALI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS----WSVYARPSKVIKKGDILH 116
N+T+VI A+L GV+ ++ C L R P W V +P + + G L
Sbjct: 58 LNDTRVIPARLLGVKAGGGG----QVECLLLRRDDPEQDPDLWRVLVKPGRRVHPGHRLV 113
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F G LEA V+D G L+ F +G + E + +G +PLPPYI +R R
Sbjct: 114 F----GDGALEAEVLDTTEEGGRLVRFRYTG-DWEDLLKRLGEMPLPPYIKERRADSGR- 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA++ GSVAAPTAGLHFT LL +L G++V +TLHVG GTF PV+V +
Sbjct: 168 ---YQTVYARVPGSVAAPTAGLHFTEELLEQLRDRGMEVGTITLHVGLGTFRPVQVARVE 224
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E I + TA+ ++ V+ RGGRI +VGTT R LE+A P G+T++F
Sbjct: 225 EHHMHAEYFRIPSETAELVSRVRERGGRIWAVGTTVCRALESAALRG--WGPREGWTDLF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+ FR VD L++NFHLPKSTLLMLVSA G E+ YQ AI YRF+S+GD L+
Sbjct: 283 IYPGFSFRVVDRLITNFHLPKSTLLMLVSALAGREQILGAYQEAIEKGYRFFSFGDAMLI 342
>gi|229081682|ref|ZP_04214177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-2]
gi|229152621|ref|ZP_04280810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1550]
gi|228630882|gb|EEK87522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1550]
gi|228701686|gb|EEL54177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-2]
Length = 354
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|118479574|ref|YP_896725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis str. Al Hakam]
gi|118418799|gb|ABK87218.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis str. Al Hakam]
Length = 354
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|220935237|ref|YP_002514136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thioalkalivibrio sp. HL-EbGR7]
gi|254764288|sp|B8GTQ5|QUEA_THISH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219996547|gb|ACL73149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thioalkalivibrio sp. HL-EbGR7]
Length = 364
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 215/356 (60%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LPP IA RP+ R ++RL+ + + ++D DLP LN D +V
Sbjct: 1 MRLSDFHYELPPELIAQRPLAERSASRLLCLDRDTGA---LADRRFRDLPDLLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GV+ R E + L + + R SK +G +L
Sbjct: 58 FNDTRVIPARLLGVKRDTGGRVEVLVERVL----DEHRVLAHVRASKSPGEGVVLWL--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ LEA V + G++ ++ + + + G +PLPPYI +RP A D Y
Sbjct: 111 --EEALEAVV--EGREGDLFCLWFAGDLPVIELLERHGHMPLPPYI--ERPDAAEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF +++++R+ + G++ VTLHVGAGTF PV+VED H+M
Sbjct: 165 QTVFASRPGAVAAPTAGLHFDADIMARMRARGVETAAVTLHVGAGTFQPVRVEDVSRHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + + ++RGGR+V+VGTT++R LE+A DG + P+SG T +FITPG
Sbjct: 225 HAEWTEVSTQVCDQVAACRARGGRVVAVGTTAVRSLESAAA-DGELKPFSGDTRLFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FR VD L++NFHLP+STLLMLVSAF G E + Y+HA++ YRF+SYGD +
Sbjct: 284 YTFRVVDALVTNFHLPESTLLMLVSAFAGYEPVMQAYRHAVAERYRFFSYGDAMFI 339
>gi|228923170|ref|ZP_04086461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228836549|gb|EEM81899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 350
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|229175092|ref|ZP_04302609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus MM3]
gi|228608388|gb|EEK65693.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus MM3]
Length = 350
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 208/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRHLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|168483957|ref|ZP_02708909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1873-00]
gi|172042767|gb|EDT50813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1873-00]
Length = 342
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEGLIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQRIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|312901590|ref|ZP_07760862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0470]
gi|311291311|gb|EFQ69867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0470]
Length = 343
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V
Sbjct: 2 LSTEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---MEDKHFHDILDELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI K +D D Y
Sbjct: 112 -GDGRLKAVVKEELEHGGRIIEFKYDGIFLEILESL-GEMPLPPYI--KERLDDPDR--Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H M
Sbjct: 166 QTVYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T Y+HAI YRF+S+GD
Sbjct: 286 GYQFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYKHAIEEKYRFFSFGD 338
>gi|228902946|ref|ZP_04067087.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 4222]
gi|228967494|ref|ZP_04128522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228792209|gb|EEM39783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228856730|gb|EEN01249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 4222]
Length = 350
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|322375519|ref|ZP_08050032.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C300]
gi|321279782|gb|EFX56822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C300]
Length = 342
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RDS++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDSSKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFNGQIQSDSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|270292452|ref|ZP_06198663.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M143]
gi|270278431|gb|EFA24277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M143]
Length = 342
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEFQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSDEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|257876333|ref|ZP_05655986.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC20]
gi|257810499|gb|EEV39319.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC20]
Length = 343
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF+LP IA P+ R S+RL+VV D ++ L DA+V
Sbjct: 2 LTTEDFDFELPEELIAQTPLSDRSSSRLLVVDRETGK---FEDKHFYNIIDELAPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + ++W +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V ++ + G ++ F GI LE SL G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEEELDHGGRIIRFQYKGIFLEILESL-GEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 286 GYQFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|196044952|ref|ZP_03112186.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB108]
gi|225866399|ref|YP_002751777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB102]
gi|254764265|sp|C1ESW2|QUEA_BACC3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196024440|gb|EDX63113.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB108]
gi|225787051|gb|ACO27268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB102]
Length = 350
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|257425764|ref|ZP_05602188.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257428424|ref|ZP_05604822.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257431062|ref|ZP_05607441.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 68-397]
gi|257433748|ref|ZP_05610106.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus E1410]
gi|257436663|ref|ZP_05612707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M876]
gi|282914445|ref|ZP_06322231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M899]
gi|282924791|ref|ZP_06332457.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C101]
gi|293503518|ref|ZP_06667365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 58-424]
gi|293510537|ref|ZP_06669242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M809]
gi|293537080|ref|ZP_06671760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M1015]
gi|257271458|gb|EEV03604.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257275265|gb|EEV06752.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257278265|gb|EEV08907.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 68-397]
gi|257281841|gb|EEV11978.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus E1410]
gi|257284014|gb|EEV14137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M876]
gi|282313157|gb|EFB43553.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C101]
gi|282321626|gb|EFB51951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M899]
gi|290919925|gb|EFD96993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M1015]
gi|291095184|gb|EFE25449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 58-424]
gi|291466428|gb|EFF08949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M809]
Length = 341
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNGKIIAECIKEMDQGGRIMCLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|86609129|ref|YP_477891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557671|gb|ABD02628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 392
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/371 (40%), Positives = 214/371 (57%), Gaps = 20/371 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +D+ LPP +IA PV PRD AR++VV+P+ LP +L D +V
Sbjct: 27 LLTASYDYTLPPDQIAQTPVEPRDQARMLVVYPDRH-----EHRRFCHLPDYLREGDLLV 81
Query: 61 FNNTKVITAQLNGVRFCHINRREKEI--SCTLHMRVSPN-------SWSVYARPSKVIKK 111
N+TKVI A+L G + R E + C + + SW V RP K +K
Sbjct: 82 LNDTKVIPARLFGAKEPSGARVEVLLLEPCLEGIPAAAQPLPDQAWSWRVLVRPGKRVKV 141
Query: 112 GDILHFFSQDGQ-SRLEATVID-KWNTGEILLVFSISGIE-LERQISLVGTIPLPPYI-A 167
GD + F+S+ G S L ATV+ TG ++ F G + E + VG IPLPPYI A
Sbjct: 142 GDRIGFWSKQGSPSGLRATVLALDPETGGRVVQFEWEGAQPFEEILEQVGRIPLPPYIKA 201
Query: 168 RKRPIDAR-DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
P + DYQT +AK GSVAAPTAGLHFT LL RL GI+ ++TL++G GT
Sbjct: 202 SGSPGSGQVRPEDYQTLWAKHPGSVAAPTAGLHFTQELLERLAQKGIQTAYITLNIGLGT 261
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F PV+ E +H +HSE + A T A+ ++RGGR+++VGTT +R LETA G +
Sbjct: 262 FRPVEAERVTEHRLHSEWLKVPAETVAAIQKAQARGGRVIAVGTTVVRSLETAAA-SGTL 320
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
PW G +++FI PGY +R + L++NFHLP+S+L+MLV+A G + +Y+ A+ YR
Sbjct: 321 QPWQGKSDLFIYPGYSWRVIQGLVTNFHLPRSSLMMLVAALIGRQRLLDLYREAVDQGYR 380
Query: 347 FYSYGDTSLLF 357
FYS+GD L+
Sbjct: 381 FYSFGDGMLIL 391
>gi|283470916|emb|CAQ50127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ST398]
Length = 341
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSNRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|229186657|ref|ZP_04313818.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BGSC 6E1]
gi|228596916|gb|EEK54575.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BGSC 6E1]
Length = 350
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|289167559|ref|YP_003445828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Streptococcus mitis B6]
gi|288907126|emb|CBJ21960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Streptococcus mitis B6]
Length = 342
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAIVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFEGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVS+F G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSSFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|270308109|ref|YP_003330167.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Dehalococcoides sp. VS]
gi|270154001|gb|ACZ61839.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Dehalococcoides sp. VS]
Length = 343
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 207/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA +P PRDS+RL+V++ ++ + ++ + D +V
Sbjct: 1 MKTSDFDYKLPQEYIAQKPAEPRDSSRLLVLNRQRG---ELTSRIFGEITEYFKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ G++ +I L R N W +P K K G I+
Sbjct: 58 MNNSRVLPARIKGIK----RDTAAKIEILLLKRDGDNCWEALLKPGKRTKPGTIIDIHQH 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ +A V+ + G LL FS E + +G +PLPPYI P+ + Y
Sbjct: 114 GEETSTQAEVLADKDDGIKLLRFSD-----ETHLMKLGEVPLPPYI--HTPVSNPER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT++LL RL IG+ +VTLH+G TF PVK ED DHI+
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTTDLLKRLSEIGVICTYVTLHIGLDTFRPVKEEDPKDHII 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H E G + A TA A+ K+ G R+ VGT++ RL+E A+ +++GII P+S + ++FI
Sbjct: 225 HREYGILSAETAAAICQAKANGKRVFCVGTSATRLVEQASSLSQNGIIEPYSDWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+FR VD ++NFHLP+ST LML +AF G KK Y+ AI YRFYS+GD L+
Sbjct: 285 PGYKFRVVDCFITNFHLPRSTPLMLTAAFAGWPFLKKAYEKAIHEHYRFYSFGDAMLVL 343
>gi|218899587|ref|YP_002447998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9842]
gi|226736731|sp|B7IIT0|QUEA_BACC2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218545497|gb|ACK97891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9842]
Length = 350
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|306829783|ref|ZP_07462972.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis ATCC 6249]
gi|304428134|gb|EFM31225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis ATCC 6249]
Length = 342
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEFQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V + G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTQELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKFVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|319639459|ref|ZP_07994209.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa C102]
gi|317399354|gb|EFV80025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa C102]
Length = 342
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 211/357 (59%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 1 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALPTLP----IEDKHFGDLPDYVAPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKASG-----GKIEALIERVLDAHTALAHIRSSKSPKPGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + A ++++ E L G + + + G +PLPPYI +R D D
Sbjct: 109 --EGDIRAVMLER---AEELFYLKFEGAQTVYELLEQNGHLPLPPYI--ERAADDEDDSR 161
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H
Sbjct: 162 YQTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHK 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITP
Sbjct: 222 MHSEWFDVPAETVAAVEAAKARGNKVWAVGTTSMRALESAACETGRLEAGRGDTDIFITP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRF D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ YRF+SYGD +L
Sbjct: 282 GYRFNVADRLITNFHLPKSTLLMLVSAFSGMEHIRSVYRHAVEQEYRFFSYGDAMIL 338
>gi|225573604|ref|ZP_03782359.1| hypothetical protein RUMHYD_01798 [Blautia hydrogenotrophica DSM
10507]
gi|225039043|gb|EEG49289.1| hypothetical protein RUMHYD_01798 [Blautia hydrogenotrophica DSM
10507]
Length = 341
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 202/359 (56%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R S+RL+ + IS D+ +L D +V
Sbjct: 1 MKTSDFYYELPQELIAQDPLEDRSSSRLLHLDRRTG---EISHGTFQDILTYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L G R+E I L R + W +P K K G L F
Sbjct: 58 INDTKVIPARLFG-------RKEDTGAVIELLLLKRRENDVWETLVKPGKKAKVGTKLIF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L ++D G L+ F GI E + +G +PLPPYI K +D
Sbjct: 111 ----GDGILCGEILDVVEEGNRLIQFQYEGI-FEEILDQLGEMPLPPYITHK----LKDK 161
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL R+ +G+K+ VTLHVG GTF PVKVED +
Sbjct: 162 NRYQTVYAKHEGSAAAPTAGLHFTPELLQRVKEMGVKIAHVTLHVGLGTFRPVKVEDVAE 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE ++ A +N K GGR++ VGTTS R LE+AT E+G + SG+T IFI
Sbjct: 222 HHMHSEFYVVEQEQAALVNETKRNGGRVICVGTTSCRTLESATDEEGKLQAGSGWTEIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ +D L++NFHLP+STLLMLVSAF G E+ Y+ A+ YRF+S+GD +
Sbjct: 282 YPGYQFKIMDGLITNFHLPESTLLMLVSAFAGKEKIMAAYKEAVRERYRFFSFGDAMFI 340
>gi|312143982|ref|YP_003995428.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halanaerobium sp. 'sapolanicus']
gi|311904633|gb|ADQ15074.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halanaerobium sp. 'sapolanicus']
Length = 347
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 207/362 (57%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+ LP IA +P+ RD +RLMV+ P +I + L +L +L D ++
Sbjct: 1 MRVEEFDYQLPEELIAQKPLPERDMSRLMVLDPQNK---MIREDLFKNLKRYLEPGDRLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + EI L + W V +P + KKG + F
Sbjct: 58 LNNSRVIPARLYGEKIPTGT----EIEILLLNELKEGRWEVLVKPGRRAKKGVKIQF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q+ LEA V++ + G ++ FS E ++ +G +PLPPYI K R
Sbjct: 111 --QNILEAEVLEYTDFGGRIVEFSWDDGCSSFEEILNKLGEMPLPPYINEKLDNPER--- 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K +GS AAPTAGLHFT LL L + G+K+ ++TLHVG GTF PVK E +DH
Sbjct: 166 -YQTVYSKKRGSAAAPTAGLHFTDQLLRDLENYGVKIDYITLHVGLGTFRPVKSEKIEDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E I T + ++ G ++V+VGTT R LETA + G I + G+T+IFI
Sbjct: 225 KMHAEYAEISPETVARIKKTQANGNKVVAVGTTVTRTLETA-AQSGSIKAFKGWTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ +D L++NFHLPKSTLLMLVSA G E K Y A+ YRF+S GD L+
Sbjct: 284 PGYEFKVIDSLITNFHLPKSTLLMLVSALAGKELILKAYNQAVEEEYRFFSLGDAMLILN 343
Query: 359 KR 360
++
Sbjct: 344 RK 345
>gi|282919414|ref|ZP_06327149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C427]
gi|282317224|gb|EFB47598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C427]
Length = 341
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNDKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|326204477|ref|ZP_08194334.1| LOW QUALITY PROTEIN:
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Clostridium papyrosolvens DSM 2782]
gi|325985270|gb|EGD46109.1| LOW QUALITY PROTEIN:
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Clostridium papyrosolvens DSM 2782]
Length = 340
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 203/361 (56%), Gaps = 27/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P+ RD +RLMV++ I L +D+ +L+ D +V
Sbjct: 1 MDLHDFDYYLPEELIAQHPMEKRDMSRLMVLNKETG---EIEHKLFTDIVNYLDEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNT+VI A+L G EKE I L RV + W V RP K K G
Sbjct: 58 LNNTRVIPARLLG---------EKEGTGGKIEFVLLKRVEGDKWEVILRPGKKAKPGSRF 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G L+A +++ + G L+ F G+ E + VG +PLPPYI K R
Sbjct: 109 VF----GNGELKAEILEVLDEGNRLVRFIYDGV-FEEILDRVGIMPLPPYITEKLENPER 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YAK+ GS AAPTAGLHFT LL L G+K+ +V LHVG GTF PVKV+D
Sbjct: 164 ----YQTVYAKVNGSAAAPTAGLHFTKELLDSLTRKGVKIAYVMLHVGLGTFRPVKVDDI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MHSE I T +N + +G ++V+VGTTS R+LET + G I P G+T+I
Sbjct: 220 TQHKMHSEYYSISQETCDIINDTRQKGKKVVAVGTTSCRVLETV-GKSGRIAPCDGWTDI 278
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYRF+ VD L++NFHLP+STL+MLVS+ G + Y A+ YRF+S+GD
Sbjct: 279 FIYPGYRFKVVDRLITNFHLPESTLIMLVSSLAGRDNVMHAYNVAVEEKYRFFSFGDAMF 338
Query: 356 L 356
+
Sbjct: 339 I 339
>gi|330998873|ref|ZP_08322600.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parasutterella excrementihominis YIT 11859]
gi|329576087|gb|EGG57606.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parasutterella excrementihominis YIT 11859]
Length = 354
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 210/361 (58%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP S IA P+ R ++RL+ V P+ S + D D+ L D +VFN
Sbjct: 8 LSDFDFELPESLIAQYPLKDRAASRLLHVKPDGS----VEDLHFRDILNLLKPGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV-YARPSKVIKKGDILHFFSQD 121
NTKVI A+LNG + + + RV+ ++ R SK K G IL+F +
Sbjct: 64 NTKVIKARLNG------KKETGGVFEAMTERVTGTYEAISMMRASKAAKPGTILYFDHPE 117
Query: 122 GQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ A V+ + GE L F +E+ + G +PLPPYI + + D Y
Sbjct: 118 GKEPARAEVLGR--EGEFFRLKFDHPVLEV---LDEYGKVPLPPYI--QHAAEKSDESRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK G+VAAPTAGLHFT LL ++ G + FVTLHVGAGTF PV+VE+ +H+M
Sbjct: 171 QTVYAKYPGAVAAPTAGLHFTDELLQQIRDKGCEEVFVTLHVGAGTFQPVRVENLSEHVM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
HSE I A+ +N K+ G R+V VGTTSLR +E + ++ +G + S T +FI
Sbjct: 231 HSEWYSISPEAAEKINKAKAEGRRVVCVGTTSLRTVEASASQNPEGKVRAESADTRLFIK 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ D +++NFHLPKSTL+MLVSA CG +E Y+HA+ YRF+SYGD L Q
Sbjct: 291 PGYEFKVCDAMVTNFHLPKSTLVMLVSALCGRDEILAAYKHAVDEKYRFFSYGDACFLEQ 350
Query: 359 K 359
K
Sbjct: 351 K 351
>gi|315613447|ref|ZP_07888355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis ATCC 49296]
gi|315314443|gb|EFU62487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis ATCC 49296]
Length = 342
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + S G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQSKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFNGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|325915107|ref|ZP_08177433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
vesicatoria ATCC 35937]
gi|325538629|gb|EGD10299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
vesicatoria ATCC 35937]
Length = 356
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 217/372 (58%), Gaps = 38/372 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP IA P+ R ++RL+VV P P SD V DLP L D ++
Sbjct: 1 MKKSDFNYALPEELIAQAPLAERAASRLLVVSP---APAAFSDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INR--REKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+T+VI A+L G + I R E+E + SP + S+ A + G
Sbjct: 58 FNDTRVIPARLFGQKASGGRVEILIERLLGEREARVQIGASKSPKAGSLIA-----LDAG 112
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+DG+ LL F I + LE+ + G +PLPPYI R+ +
Sbjct: 113 GQAEVLGRDGEF--------------YLLRFEIP-LPLEQWLPEAGRLPLPPYIRREPGL 157
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ R+ YQT +A+ G+VAAPTAGLHF +LL+RL GI+ VTLHVGAGTF PV+V
Sbjct: 158 EDRER--YQTVFAREVGAVAAPTAGLHFDEDLLARLRERGIEFGHVTLHVGAGTFQPVRV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTE---DGIIN 287
+ D H+MH E + A + + ++RGGR+++VGTT +R LE+A TTE +G +
Sbjct: 216 DALDQHVMHKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTEAAPEGELL 275
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P++G T IFI PGYR R+VD +++NFHLP+STLLM+VSAF G E + YQHAI+ YRF
Sbjct: 276 PFAGETQIFILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGRERIFEAYQHAIAQRYRF 335
Query: 348 YSYGDTSLLFQK 359
+SYGD LL+ +
Sbjct: 336 FSYGDAMLLWGR 347
>gi|241664129|ref|YP_002982489.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
pickettii 12D]
gi|240866156|gb|ACS63817.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ralstonia
pickettii 12D]
Length = 356
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 211/356 (59%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V + D +DL +L D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAVR-RAGDAVHFEDRQFADLVDYLRPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A RF ++ + + ++ R SK +G L
Sbjct: 61 FNDTRVIKA-----RFFGQKASGGKVEVLVERLLDEHTVLAQIRSSKSPVEGTTLRL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F ++L I G +PLPPYI + D+ D Y
Sbjct: 113 --ADAFDVTVGPRAEPF-FTLRFPQPALDL---IEQYGRLPLPPYI--EHDPDSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L ++L ++GI+ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARNPGAVAAPTAGLHFDDALFAKLDAMGIQRGFLTLHVGAGTFQPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A A+A+ + ++ GGRI++VGTTS+R LE+A DG +N SG T+IFITPG
Sbjct: 225 HSEWYEITAELAEAIRATRAAGGRIIAVGTTSMRALESAAQPDGTLNACSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFRAVD+L++NFHLPKSTLLMLVSAF G+ ++ YQHAI+ YRF+SYGD LL
Sbjct: 285 YRFRAVDLLVTNFHLPKSTLLMLVSAFAGMSAIREAYQHAIAQRYRFFSYGDAMLL 340
>gi|15924630|ref|NP_372164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu50]
gi|15927220|ref|NP_374753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus N315]
gi|21283319|ref|NP_646407.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MW2]
gi|49483884|ref|YP_041108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49486473|ref|YP_043694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MSSA476]
gi|148268120|ref|YP_001247063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH9]
gi|150394188|ref|YP_001316863.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH1]
gi|156979958|ref|YP_001442217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu3]
gi|253317209|ref|ZP_04840422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|255006425|ref|ZP_05145026.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|258438213|ref|ZP_05689497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9299]
gi|258443676|ref|ZP_05692015.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8115]
gi|258446883|ref|ZP_05695037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6300]
gi|258448797|ref|ZP_05696909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6224]
gi|258453753|ref|ZP_05701728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5937]
gi|269203265|ref|YP_003282534.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ED98]
gi|282893144|ref|ZP_06301378.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8117]
gi|282904220|ref|ZP_06312108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C160]
gi|282906046|ref|ZP_06313901.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282916908|ref|ZP_06324666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus D139]
gi|282928275|ref|ZP_06335880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A10102]
gi|283958400|ref|ZP_06375851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus A017934/97]
gi|295406761|ref|ZP_06816566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8819]
gi|295428215|ref|ZP_06820847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|296275925|ref|ZP_06858432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MR1]
gi|297245656|ref|ZP_06929521.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8796]
gi|54038976|sp|P65951|QUEA_STAAN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54038977|sp|P65952|QUEA_STAAW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54041780|sp|P65950|QUEA_STAAM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56749512|sp|Q6G8S9|QUEA_STAAS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56749559|sp|Q6GG64|QUEA_STAAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207405|sp|Q2YT90|QUEA_STAAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218744|sp|A7X356|QUEA_STAA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038882|sp|A6U2A8|QUEA_STAA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038883|sp|A5ITG4|QUEA_STAA9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13701438|dbj|BAB42732.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus N315]
gi|14247412|dbj|BAB57802.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus Mu50]
gi|21204759|dbj|BAB95455.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus MW2]
gi|49242013|emb|CAG40711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244916|emb|CAG43377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MSSA476]
gi|147741189|gb|ABQ49487.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH9]
gi|149946640|gb|ABR52576.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH1]
gi|156722093|dbj|BAF78510.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus Mu3]
gi|257848257|gb|EEV72248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9299]
gi|257851082|gb|EEV75025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8115]
gi|257854458|gb|EEV77407.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6300]
gi|257858075|gb|EEV80964.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6224]
gi|257864073|gb|EEV86826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5937]
gi|262075555|gb|ACY11528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ED98]
gi|282319395|gb|EFB49747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus D139]
gi|282331338|gb|EFB60852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282590082|gb|EFB95164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A10102]
gi|282595838|gb|EFC00802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C160]
gi|282764462|gb|EFC04588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8117]
gi|283790549|gb|EFC29366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285817322|gb|ADC37809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus 04-02981]
gi|294968508|gb|EFG44532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8819]
gi|295128573|gb|EFG58207.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|297177307|gb|EFH36559.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8796]
gi|302333313|gb|ADL23506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JKD6159]
gi|312830026|emb|CBX34868.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129925|gb|EFT85915.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus CGS03]
gi|315195543|gb|EFU25930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus CGS00]
gi|329727664|gb|EGG64120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 21172]
gi|329733065|gb|EGG69402.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 21193]
Length = 341
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|313608657|gb|EFR84503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL F2-208]
Length = 314
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 200/313 (63%), Gaps = 14/313 (4%)
Query: 41 ISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS 100
I D +++ ++LN DA+V N+T+V+ A+L+G++ + I L + N+W
Sbjct: 10 IKDQHFTEIISYLNEGDALVLNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWE 65
Query: 101 VYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
+P+K I+KG + F G L+AT +++ G +L FS GI E + +G +
Sbjct: 66 TLVKPAKRIRKGATITF----GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEM 120
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPYI + R YQT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTL
Sbjct: 121 PLPPYIKEQLADQDR----YQTVYAKENGSAAAPTAGLHFTKDLLAKISAKGVEIIFVTL 176
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-A 279
HVG GTF PV VEDT +H MHSE + +A+ +N +K++GG++V+VGTTS+R LET A
Sbjct: 177 HVGLGTFRPVDVEDTANHKMHSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIA 236
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
+ DG + SG+T IFI+PGY F+AVD L++NFHLPKSTL+MLVSA + Y H
Sbjct: 237 SRHDGKLVAESGWTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNH 296
Query: 340 AISHAYRFYSYGD 352
A+ YRF+S+GD
Sbjct: 297 AVEEQYRFFSFGD 309
>gi|69249043|ref|ZP_00604858.1| Queuosine biosynthesis protein [Enterococcus faecium DO]
gi|257878859|ref|ZP_05658512.1| queuosine biosynthesis protein [Enterococcus faecium 1,230,933]
gi|257881495|ref|ZP_05661148.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,502]
gi|257885767|ref|ZP_05665420.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,501]
gi|257890717|ref|ZP_05670370.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,410]
gi|260558424|ref|ZP_05830620.1| queuosine biosynthesis protein [Enterococcus faecium C68]
gi|261207140|ref|ZP_05921829.1| queuosine biosynthesis protein [Enterococcus faecium TC 6]
gi|289565261|ref|ZP_06445712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium D344SRF]
gi|293556909|ref|ZP_06675470.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1039]
gi|293560279|ref|ZP_06676776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1162]
gi|294615101|ref|ZP_06694987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1636]
gi|294618443|ref|ZP_06698013.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1679]
gi|294620892|ref|ZP_06700093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium U0317]
gi|314943499|ref|ZP_07850266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133C]
gi|314991571|ref|ZP_07857047.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133B]
gi|314994904|ref|ZP_07860031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a01]
gi|68194302|gb|EAN08818.1| Queuosine biosynthesis protein [Enterococcus faecium DO]
gi|257813087|gb|EEV41845.1| queuosine biosynthesis protein [Enterococcus faecium 1,230,933]
gi|257817153|gb|EEV44481.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,502]
gi|257821623|gb|EEV48753.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,501]
gi|257827077|gb|EEV53703.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,410]
gi|260075598|gb|EEW63904.1| queuosine biosynthesis protein [Enterococcus faecium C68]
gi|260078768|gb|EEW66470.1| queuosine biosynthesis protein [Enterococcus faecium TC 6]
gi|289162917|gb|EFD10766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium D344SRF]
gi|291592043|gb|EFF23666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1636]
gi|291595284|gb|EFF26607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1679]
gi|291599503|gb|EFF30519.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium U0317]
gi|291600993|gb|EFF31284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1039]
gi|291605729|gb|EFF35166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1162]
gi|313590886|gb|EFR69731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a01]
gi|313593855|gb|EFR72700.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133B]
gi|313597871|gb|EFR76716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133C]
Length = 343
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 207/356 (58%), Gaps = 23/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTGE---MEDKHFHEIIEELQPGDALV 58
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNT+V+ A+L G + H+ L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEKPDTGAHLE-------VLLLTNTQGDTWETLIKPAKRAKVGTRISF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G RL+A V ++ G ++ F GI LE SL G +PLPPYI + D
Sbjct: 112 ----GDGRLQAVVKEELEHGGRIIDFEYEGIFLEILESL-GEMPLPPYIKER----LEDP 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++
Sbjct: 163 DRYQTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEE 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MHSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IF
Sbjct: 223 HHMHSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
ITPGY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 283 ITPGYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGD 338
>gi|229013635|ref|ZP_04170766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides DSM 2048]
gi|228747694|gb|EEL97566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides DSM 2048]
Length = 354
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 207/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFTDILSYLQEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDNSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|118580221|ref|YP_901471.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Pelobacter
propionicus DSM 2379]
gi|166216735|sp|A1APZ3|QUEA_PELPD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|118502931|gb|ABK99413.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pelobacter
propionicus DSM 2379]
Length = 343
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 199/356 (55%), Gaps = 20/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+VKEFD+ LP IA P RD +RLM+++ I L D+ L D +V
Sbjct: 1 MLVKEFDYHLPEELIARYPAPERDGSRLMLLNRESG---TIGHGLFRDIADHLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + EI WS R SK ++ G ++
Sbjct: 58 LNDTRVIPARLFGRK---ATGGRVEIFLVRRQETQAERWSCLMRSSKGMRPGQLITL--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS---GIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V+++ LL F + + LER+ G +PLPPY+ +RP ++ D
Sbjct: 112 --AGAMTALVVERLEPEGWLLEFQGAEPFSVWLERE----GEMPLPPYL--QRPAESGDQ 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+ YQT +A+ G+VAAPTAGLHFT LL RL G+ +TLH G GTF P++VE D
Sbjct: 164 LRYQTVFARSAGAVAAPTAGLHFTPELLERLAERGVATACLTLHTGPGTFQPLRVERVQD 223
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +HSE I A T QA+ K RGGR+V+VGTTS R LE A E G + P SG +IFI
Sbjct: 224 HRIHSERYHISAETCQAIAETKQRGGRVVAVGTTSARTLEYAADEKGGLCPGSGDADIFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGYRFR VD L++NFHLP+STL+MLVSAF G E Y A YRFYSYGD
Sbjct: 284 YPGYRFRVVDALVTNFHLPESTLIMLVSAFAGKEYVFHAYHEAARLGYRFYSYGDA 339
>gi|229062113|ref|ZP_04199438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH603]
gi|229169161|ref|ZP_04296876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH621]
gi|228614389|gb|EEK71499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH621]
gi|228717265|gb|EEL68940.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH603]
Length = 354
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 207/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFTDILSYLQEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|116515685|ref|YP_816714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae D39]
gi|148997530|ref|ZP_01825135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP11-BS70]
gi|168575875|ref|ZP_02721790.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae MLV-016]
gi|46577049|sp|Q8DPA0|QUEA_STRR6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|122278400|sp|Q04JT4|QUEA_STRP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116076261|gb|ABJ53981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae D39]
gi|147756585|gb|EDK63626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP11-BS70]
gi|183578232|gb|EDT98760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae MLV-016]
Length = 342
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQRIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|314938950|ref|ZP_07846215.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a04]
gi|314948207|ref|ZP_07851601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0082]
gi|314951567|ref|ZP_07854613.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133A]
gi|313596261|gb|EFR75106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133A]
gi|313641659|gb|EFS06239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a04]
gi|313645340|gb|EFS09920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0082]
Length = 347
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 207/356 (58%), Gaps = 23/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V
Sbjct: 6 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTGE---MEDKHFHEIIEELQPGDALV 62
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNT+V+ A+L G + H+ L ++W +P+K K G + F
Sbjct: 63 MNNTRVLPARLYGEKPDTGAHLE-------VLLLTNTQGDTWETLIKPAKRAKVGTRISF 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G RL+A V ++ G ++ F GI LE SL G +PLPPYI + D
Sbjct: 116 ----GDGRLQAVVKEELEHGGRIIDFEYEGIFLEILESL-GEMPLPPYIKER----LEDP 166
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++
Sbjct: 167 DRYQTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEE 226
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MHSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IF
Sbjct: 227 HHMHSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
ITPGY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 287 ITPGYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGD 342
>gi|283770714|ref|ZP_06343606.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus H19]
gi|283460861|gb|EFC07951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus H19]
Length = 341
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGEMKYLH---FKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|229543705|ref|ZP_04432765.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
coagulans 36D1]
gi|229328125|gb|EEN93800.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
coagulans 36D1]
Length = 342
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FD++LP IA P+ R +RLMV+ I + ++ +L D +V
Sbjct: 1 MKLDLFDYELPEELIAQTPLKNRSDSRLMVLDKKTG---EIEHSVFKNITQYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L G++ + +I L ++ + W +P+K +K G ++ F
Sbjct: 58 LNNTKVLPARLFGIK----DETGAKIEVLLLKQLEGDRWETLVKPAKRVKTGTVVRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A ++ + G ++ F GI E ++ +G +PLPPYI K ++ +D Y
Sbjct: 111 -GDGQLSAVCAEELDHGGRVMDFQYEGIFYE-VLNELGKMPLPPYI--KEQLEDQD--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + ++G+K+ ++TLHVG GTF PV E+ ++H M
Sbjct: 165 QTVYAKEPGSAAAPTAGLHFTEALLKEIEAMGVKIVYITLHVGLGTFRPVNEENIENHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + A+ + VK GGR+VSVGTTS R LET A+ DG I SG+T+IFI P
Sbjct: 225 HAEFYQVSEEAARTITEVKENGGRVVSVGTTSTRTLETVASAHDGKIVASSGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++A+D L++NFHLPKSTL+M+VSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 GYQYKAIDALITNFHLPKSTLIMMVSALAGRENILHAYETAVKEKYRFFSFGDAMLI 341
>gi|227550874|ref|ZP_03980923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX1330]
gi|227179972|gb|EEI60944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX1330]
Length = 347
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 207/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L+ DA+V
Sbjct: 6 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTGE---MKDKHFHEIIEELHPGDALV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 63 MNNTRVLPARLYGEK----PDTGAHLEVLLLTNTEGDTWETLIKPAKRAKVGTRISF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI + D Y
Sbjct: 116 -GDGRLQAVVKEELEHGGRIIDFEYEGIFLEILESL-GEMPLPPYIKER----LEDPDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H M
Sbjct: 170 QTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 230 HSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 290 GYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIDERYRFFSFGD 342
>gi|116333839|ref|YP_795366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus brevis ATCC 367]
gi|122269474|sp|Q03R37|QUEA_LACBA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116099186|gb|ABJ64335.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus brevis ATCC 367]
Length = 344
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 214/355 (60%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL+V+ + + D D+ L++ DA+V N
Sbjct: 5 LDDFDYDLPHELIAQTPIKQRDTSRLLVLDHQANT---LEDKHFYDILDELHAGDAVVMN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L G++ + L V + W +P+K ++ G + F G
Sbjct: 62 NSRVMPARLYGIK----PETGGHVEVLLLHNVEGDVWETLMKPAKRLRVGTTVTF----G 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L ATV ++ G L+ F GI +E + +G PLPPYI K +D D YQT
Sbjct: 114 DGQLTATVTEEREDGIRLIEFHYDGIFMEI-LEQLGETPLPPYIKEK--LDDPDR--YQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLH+T LL ++ + G+K+ ++TLHVG GTF PV+ + +DH MHS
Sbjct: 169 VYAKENGSAAAPTAGLHWTQELLDQVAAKGVKLVYITLHVGLGTFRPVEEANIEDHKMHS 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E +D A LN V++ GGRI++ GTTS+R LET T+ G I P SG+T+IFI PGY
Sbjct: 229 EFYRLDEAAAATLNEVRANGGRIIATGTTSIRTLETIGTKFKGEIKPDSGWTDIFIKPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++ V+ ++NFHLPKSTL+MLV+AF G ++ Y HAI YRF+S+GD +
Sbjct: 289 QWQVVNAFITNFHLPKSTLVMLVAAFTGRDQILNAYHHAIEEKYRFFSFGDAMFI 343
>gi|163942168|ref|YP_001647052.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
weihenstephanensis KBAB4]
gi|226713834|sp|A9VIP4|QUEA_BACWK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|163864365|gb|ABY45424.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Bacillus
weihenstephanensis KBAB4]
Length = 350
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 207/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 1 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFADILSYLQEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKEDGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|15673557|ref|NP_267731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis Il1403]
gi|13878678|sp|Q9CFA6|QUEA_LACLA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|12724579|gb|AAK05673.1|AE006388_4 S-adenosylmethionine tRNA ribosyltransferase [Lactococcus lactis
subsp. lactis Il1403]
gi|326407043|gb|ADZ64114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis CV56]
Length = 345
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 212/361 (58%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ R +RL+++ P + D ++ L + DA+V
Sbjct: 1 MNINDFDFDLPEELIAQTPLEKRSESRLLILDPKTEE---LEDRHFYNIIDELEAGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 58 LNNTRVLPARLHGER----AETGGHIELLLLKDMGQNRWETLAKPARKMKVGEEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V++ + G ++ F GI LE SL G +PLPPYI + +D Y
Sbjct: 111 -GDGRLKAVVVEVLDHGGRIVEFKYDGIFLEILESL-GEMPLPPYIHEQ----LQDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK+ G +IV+ GTTS+R LET ++ DG I SG+T+IFI P
Sbjct: 225 HSEFYRLTEEAAAQLRAVKASGHKIVASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++ VD +NFHLPKSTL+MLV+AF G + YQHAI YRF+S+GD + K
Sbjct: 285 GYEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLDAYQHAIDEKYRFFSFGDAMFVRPK 344
Query: 360 R 360
+
Sbjct: 345 K 345
>gi|238020815|ref|ZP_04601241.1| hypothetical protein GCWU000324_00705 [Kingella oralis ATCC 51147]
gi|237867795|gb|EEP68801.1| hypothetical protein GCWU000324_00705 [Kingella oralis ATCC 51147]
Length = 340
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 216/361 (59%), Gaps = 29/361 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R ++RL+V P+ P +D +DLP+++N+ D +V
Sbjct: 1 MQLSDFDFTLPEHLIAQNPPATRGNSRLLVALPD--APF--TDKQFADLPSYINAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMRARLFGQKASG-----GKIEALIERVLDAHTALAHIRSSKSPKAGAALIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKRPIDAR 175
DG + AT++++ + L +G E LER G +PLPPYI R DA
Sbjct: 109 DGD--IHATMLERADE---LFKIQFAGEETVYELLERH----GKLPLPPYIVRA--ADAD 157
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK QG+VAAPTAGLHFT LL L + G++ VTLHVGAGTF PV+V++
Sbjct: 158 DDERYQTVYAKFQGAVAAPTAGLHFTDALLGSLKAKGVEFAEVTLHVGAGTFQPVRVDNI 217
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE + A T + + K RG ++ SVGTTSLR +E+A G + G T+I
Sbjct: 218 AEHKMHSEWFDVPADTVAKIAAAKQRGSKVWSVGTTSLRAIESA-ARSGSLKAGQGDTDI 276
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPG+ F+ +D L++NFHLPKSTLLMLVSAF G ++ + +Y+HA+ YRF+SYGD +
Sbjct: 277 FITPGFSFQVIDRLITNFHLPKSTLLMLVSAFSGCDKIRAVYRHAVEQEYRFFSYGDAMI 336
Query: 356 L 356
L
Sbjct: 337 L 337
>gi|116493018|ref|YP_804753.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Pediococcus pentosaceus ATCC 25745]
gi|122265518|sp|Q03ER1|QUEA_PEDPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116103168|gb|ABJ68311.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Pediococcus pentosaceus ATCC 25745]
Length = 344
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++F++DLP IA P+ RD +RL+V+ + D D+ LN DA+V
Sbjct: 3 LTTEDFNYDLPHELIAQTPIKERDESRLLVLDHETGA---MEDKHFYDIIDQLNPGDAVV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ G++ ++ L + + W +P+K K G + F
Sbjct: 60 MNNSRVMPARIYGIK----DKTGGHFEVLLLHNIEGDRWETLVKPAKRAKTGTKIIF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ATV + G +VF GI +E + +G +PLPPYI K R Y
Sbjct: 113 -GDGALTATVTKELEHGGREIVFDYDGIFME-VLEKLGEMPLPPYIKEKLDDPER----Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLH+T LL ++ GIK+ ++TLHVG GTF PV ++ +DH M
Sbjct: 167 QTVYSKEPGSAAAPTAGLHWTKELLEKVEQKGIKLVYLTLHVGLGTFRPVDEDNIEDHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A ALN VK +GGRIV+ GTTS+R LET ++ +G I SG+T+IFI P
Sbjct: 227 HSEFYQLSEESAAALNEVKKQGGRIVATGTTSIRTLETIGSKFNGEIKADSGWTDIFIKP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD ++NFHLPKSTL+MLV+AF G E YQHAI YRF+S+GD +
Sbjct: 287 GYEWKVVDAFITNFHLPKSTLVMLVAAFTGRENILNAYQHAIEEKYRFFSFGDAMFI 343
>gi|15903316|ref|NP_358866.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae R6]
gi|307068069|ref|YP_003877035.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Streptococcus pneumoniae AP200]
gi|15458913|gb|AAL00077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae R6]
gi|306409606|gb|ADM85033.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine
synthetase) [Streptococcus pneumoniae AP200]
Length = 346
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 5 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 62 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I LE SL G +PLPPYI K +D R+ Y
Sbjct: 115 -GDGRLSAVVTEELTHGGRIVRFEYQRIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 169 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 229 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 289 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 346
>gi|293567788|ref|ZP_06679129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1071]
gi|291589373|gb|EFF21180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1071]
Length = 343
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 207/356 (58%), Gaps = 23/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTGE---MEDKHFHEIIEELQPGDALV 58
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNT+V+ A+L G + H+ L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEKPDTGAHLE-------VLLLTNTQGDTWETLIKPAKRAKVGTRISF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G RL+A V ++ G ++ F GI LE SL G +PLPPYI + D
Sbjct: 112 ----GDGRLQAVVKEELEHGGRIIDFEYEGIFLEILESL-GEMPLPPYIKER----LEDP 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++
Sbjct: 163 DRYQTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEE 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MHSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IF
Sbjct: 223 HHMHSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIRADSGWTDIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
ITPGY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 283 ITPGYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGD 338
>gi|229135242|ref|ZP_04264040.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST196]
gi|228648220|gb|EEL04257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST196]
Length = 354
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 208/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|281492155|ref|YP_003354135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis KF147]
gi|281375826|gb|ADA65320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis KF147]
Length = 345
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 212/361 (58%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ R +RL+++ P + D ++ L + DA+V
Sbjct: 1 MNINDFDFDLPEELIAQTPLEKRSESRLLILDPKTEE---LEDRHFYNIIDELETGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 58 LNNTRVLPARLHGER----AETGGHIELLLLKDMGQNRWETLAKPARKMKVGEEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V++ + G ++ F +GI LE SL G +PLPPYI + D Y
Sbjct: 111 -GDGRLKAVVVEVLDHGGRIVEFKYNGIFLEILESL-GEMPLPPYIHEQ----LEDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK+ G +IV+ GTTS+R LET ++ DG I SG+T+IFI P
Sbjct: 225 HSEFYRLTEEAAAQLRAVKASGHKIVASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++ VD +NFHLPKSTL+MLV+AF G + YQHAI YRF+S+GD + K
Sbjct: 285 GYEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLDAYQHAIDEKYRFFSFGDAMFVRPK 344
Query: 360 R 360
+
Sbjct: 345 K 345
>gi|297207639|ref|ZP_06924074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|296887656|gb|EFH26554.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC 51811]
Length = 347
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 211/355 (59%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +V
Sbjct: 9 IEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVEMSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 346
>gi|323440807|gb|EGA98516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus O11]
gi|323442844|gb|EGB00469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus O46]
Length = 341
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDYDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|220927982|ref|YP_002504891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
cellulolyticum H10]
gi|219998310|gb|ACL74911.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
cellulolyticum H10]
Length = 340
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 203/361 (56%), Gaps = 27/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P+ RD +RLMV+ I L DL +L+ D +V
Sbjct: 1 MNLHDFDYYLPEELIAQHPLEKRDMSRLMVLDKQTG---EIEHKLFKDLFNYLDEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNT+VI A+L G EKE I L RV ++W V RP K K G
Sbjct: 58