BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780180|ref|YP_003064593.1| S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Candidatus Liberibacter asiaticus str.
psy62]
(360 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|296132706|ref|YP_003639953.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermincola
sp. JR]
gi|296031284|gb|ADG82052.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermincola
potens JR]
Length = 341
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA PV PRD +RL+VV+ + I + ++ D +V
Sbjct: 1 MKVADFDFELPEELIAQEPVEPRDHSRLLVVNRDNGN---IEHKRFYNCIDYIEPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W V +P K +K G ++ F
Sbjct: 58 VNNTRVLPARLFGEK----KGSGAKIEFVLLKRIDRDKWEVLVKPGKRVKPGTVILF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G LEA V+ +G L+ F GI E + G +PLPPYI ++ Y
Sbjct: 111 -GGGLLEAFVLQTTESGGRLVEFRYEGI-FEELLDRFGQMPLPPYIKKQLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + V LHVG GTF PVKV++ +DH M
Sbjct: 165 QTVYAKASGSAAAPTAGLHFTEELLKKMHEKGVVIAEVMLHVGLGTFRPVKVDNVEDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I+ TA +N + RG +I++VGTTS R LETA G + P G+T+IFI PG
Sbjct: 225 HAEYYEINEETANLINRQRDRGHKIIAVGTTSCRALETAADSSGNLKPGCGWTDIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+AVD L++NFHLPKSTL+MLVSAF G + K YQ AI+ YRF+S+GD ++
Sbjct: 285 YRFKAVDRLITNFHLPKSTLVMLVSAFAGKDLIMKAYQEAIAEKYRFFSFGDAMMIL 341
>gi|291525119|emb|CBK90706.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Eubacterium rectale DSM 17629]
Length = 352
Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 154/358 (43%), Positives = 204/358 (56%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD+DLP IA P+ R S+RLMV+ +S H+ ++ +L D +V
Sbjct: 1 MDVKDFDYDLPEELIAQDPLEDRSSSRLMVLDKKTG---EVSHHVFKEIVKYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ +I L R + W +P K K G + F
Sbjct: 58 LNNTKVIPARLFGVK----EGTMAKIEILLLKRRQNDVWETLVKPGKKAKPGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID + G L+ FS GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGLLTGEVIDVVDDGNRLIQFSYEGI-FEEILDKLGQMPLPPYITHQLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV++ DH M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQVKDKGVDIAEVTLHVGLGTFRPVKVDNVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ K GGRI+SVGTTS R LE A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYMVSQEAADKINNAKKNGGRIISVGTTSTRTLEAASDENGMLKECSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YSFKVIDCLITNFHLPQSTLVMLVSALAGREHVLNAYKEAVEERYRFFSFGDAMFITN 342
>gi|238924342|ref|YP_002937858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
rectale ATCC 33656]
gi|238876017|gb|ACR75724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
rectale ATCC 33656]
gi|291529393|emb|CBK94979.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Eubacterium rectale M104/1]
Length = 352
Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 154/358 (43%), Positives = 204/358 (56%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD+DLP IA P+ R S+RLMV+ +S H+ ++ +L D +V
Sbjct: 1 MDVKDFDYDLPEELIAQDPLEDRSSSRLMVLDKKTG---EVSHHVFKEIVKYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ +I L R + W +P K K G + F
Sbjct: 58 LNNTKVIPARLFGVK----EGTMAKIEILLLKRRQNDVWETLVKPGKKAKPGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID + G L+ FS GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGLLTGEVIDVVDDGNRLIQFSYEGI-FEEILDKLGQMPLPPYITHQLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV++ DH M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQVKDKGVDIAEVTLHVGLGTFRPVKVDNVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ K GGRI+SVGTTS R LE A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYMVSQEAADKINNAKKNGGRIISVGTTSTRTLEAASDENGMLKECSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YSFKVIDCLITNFHLPQSTLVMLVSALAGREHVLNAYKEAVEERYRFFSFGDAMFITN 342
>gi|160935784|ref|ZP_02083159.1| hypothetical protein CLOBOL_00674 [Clostridium bolteae ATCC
BAA-613]
gi|158441528|gb|EDP19238.1| hypothetical protein CLOBOL_00674 [Clostridium bolteae ATCC
BAA-613]
Length = 349
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD++LP IA P+ R ++RLMV+ I + D+ +L D +V
Sbjct: 1 MDVKDFDYELPEELIAQDPLEDRSASRLMVLDRETG---EIQHRIFKDITEYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ +I L R + W RP K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----KDTGAKIEILLLKRRENDVWETLVRPGKKAKPGTVIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV+D + G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGLLTGTVVDTVDDGNRLIQFHYKGI-FEEILDQLGQMPLPPYITHQLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL+ + +G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYARHEGSAAAPTAGLHFTQELLAEIEGMGVKIAHVTLHVGLGTFRPVKVENVQDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N ++ GGR++ VGTTS R +E+A+TEDG++ +G+T IFI PG
Sbjct: 225 HSEFYIVEESEAKKVNDTRAAGGRVICVGTTSCRTVESASTEDGVLKAGTGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YRFKVLDALITNFHLPQSTLVMLVSALAGREHILDAYREAVKEGYRFFSFGDAMFI 340
>gi|291522418|emb|CBK80711.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Coprococcus catus GD/7]
Length = 341
Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 158/356 (44%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLMV+ IS H+ D+ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSSSRLMVLDRESG---EISHHIFKDIIDYLNPEDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ I L R + W RP K K G L F
Sbjct: 58 INDTKVIPARLYGVK----EDTGAHIEILLLKRRENDVWETLVRPGKKAKPGTRLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A VID G L+ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKAEVIDVVEEGNRLIHFEYEGI-FEEILDQLGEMPLPPYITHKLQD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ + + GI++ VTLHVG GTF PVKVED H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTPELLAAIEAKGIRIARVTLHVGLGTFRPVKVEDVTQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K RGGR+++VGTTS R LE+ EDG ++ G+T IFI PG
Sbjct: 225 HSEYYQVTQEAADIINDTKKRGGRVIAVGTTSTRTLESVADEDGTMHAAGGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKCIDALITNFHLPESTLLMLVSALAGKEHIMHAYETAVQERYRFFSFGDAMFI 340
>gi|317470297|ref|ZP_07929690.1| tRNA ribosyltransferase-isomerase [Anaerostipes sp. 3_2_56FAA]
gi|316902205|gb|EFV24126.1| tRNA ribosyltransferase-isomerase [Anaerostipes sp. 3_2_56FAA]
Length = 341
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 201/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ I ++ +L D +V
Sbjct: 1 MKTSDFTFDLPEELIAQDPLTDRSSSRLLVLDKETG---EIRHEGFRNIAGYLKRGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R N+W +P + K G + F
Sbjct: 58 LNDTKVIPARLIGEK----EGTGAKIEVLLLKRKQDNTWETLVKPGRKAKPGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ +L V D + G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GQGKLVGEVTDIVDEGNRLVKFEFDGI-FEEVLDELGQMPLPPYITHQLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + GI++ +VTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLKEIEEKGIRLAYVTLHVGLGTFRPVKVEDVTEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N + GGRI+SVGTTS R LE+A E+G I P SG+T IFI PG
Sbjct: 225 HSEFYVVDEEAAEKINKTRKEGGRIISVGTTSTRTLESAADENGFIEPKSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STLLMLVSA G E K Y A+ YRF+S+GD +
Sbjct: 285 YKFKVIDGLITNFHLPESTLLMLVSALAGKEHILKAYDEAVKERYRFFSFGDAMFIM 341
>gi|323485700|ref|ZP_08091037.1| hypothetical protein HMPREF9474_02788 [Clostridium symbiosum
WAL-14163]
gi|323400963|gb|EGA93324.1| hypothetical protein HMPREF9474_02788 [Clostridium symbiosum
WAL-14163]
Length = 347
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 154/359 (42%), Positives = 215/359 (59%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RL+V++ + I + D+ ++L D +V
Sbjct: 1 MDVKDFYYDLPEELIAQDPLEDRSSSRLLVLNKDTG---EIQHKVFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G +++F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRRENDIWETLVKPGKKAKIGTVINF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TV+D G L+ FS GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGLLKGTVVDVVEEGNRLIQFSYKGI-FEEILDELGQMPLPPYITHQLQD----KKRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ GI++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLGKIAEKGIEIAHVTLHVGLGTFRPVKVDNVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K +GGR++ VGTTS R LE+A EDGI+ SG+T+IFI PG
Sbjct: 225 HSEFYIVEEEEARKINDTKKKGGRVICVGTTSCRTLESAAGEDGILKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D L++NFHLP+STL+MLVSA G E K Y+ AI YRF+S+GD + K
Sbjct: 285 YRFKILDCLITNFHLPESTLVMLVSALAGREHVLKAYEEAIKERYRFFSFGDAMFIASK 343
>gi|167748863|ref|ZP_02420990.1| hypothetical protein ANACAC_03637 [Anaerostipes caccae DSM 14662]
gi|167651833|gb|EDR95962.1| hypothetical protein ANACAC_03637 [Anaerostipes caccae DSM 14662]
Length = 357
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 201/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ I ++ +L D +V
Sbjct: 17 MKTSDFTFDLPEELIAQDPLTDRSSSRLLVLDKETG---EIRHEGFRNIAGYLKRGDCLV 73
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R N+W +P + K G + F
Sbjct: 74 LNDTKVIPARLIGEK----EGTGAKIEVLLLKRKQDNTWETLVKPGRKAKPGTRISF--- 126
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ +L V D + G L+ F GI E + +G +PLPPYI + Y
Sbjct: 127 -GQGKLVGEVTDIVDEGNRLVKFEFDGI-FEEVLDELGQMPLPPYITHQLKD----KNRY 180
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + GI++ +VTLHVG GTF PVKVED +H M
Sbjct: 181 QTVYAKHEGSAAAPTAGLHFTKELLKEIEEKGIRLAYVTLHVGLGTFRPVKVEDVTEHHM 240
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N + GGRI+SVGTTS R LE+A E+G I P SG+T IFI PG
Sbjct: 241 HSEFYVVDEEAAEKINKTRKEGGRIISVGTTSTRTLESAADENGFIEPKSGWTEIFIYPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STLLMLVSA G E K Y A+ YRF+S+GD +
Sbjct: 301 YKFKVIDGLITNFHLPESTLLMLVSALAGKEHILKAYDEAVKERYRFFSFGDAMFIM 357
>gi|323695094|ref|ZP_08109236.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
symbiosum WAL-14673]
gi|323500849|gb|EGB16769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
symbiosum WAL-14673]
Length = 347
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 154/359 (42%), Positives = 215/359 (59%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RL+V++ + I + D+ ++L D +V
Sbjct: 1 MDVKDFYYDLPEELIAQDPLEDRSSSRLLVLNKDTG---EIQHKVFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G +++F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRRENDIWETLVKPGKKAKIGTVINF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TV+D G L+ FS GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGLLKGTVVDVVEEGNRLIQFSYKGI-FEEILDELGQMPLPPYITHQLQD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ GI++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLGKIAEKGIEIAHVTLHVGLGTFRPVKVDNVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K +GGR++ VGTTS R LE+A EDGI+ SG+T+IFI PG
Sbjct: 225 HSEFYIVEEEEARKINDTKKKGGRVICVGTTSCRTLESAAGEDGILKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D L++NFHLP+STL+MLVSA G E K Y+ AI YRF+S+GD + K
Sbjct: 285 YRFKILDCLITNFHLPESTLVMLVSALAGREHVLKAYEEAIKERYRFFSFGDAMFIASK 343
>gi|319790693|ref|YP_004152326.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermovibrio ammonificans HB-1]
gi|317115195|gb|ADU97685.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermovibrio ammonificans HB-1]
Length = 343
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 204/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA P PRDSARLMV+H + I + D+ +L D +V
Sbjct: 1 MKVSDFDYHLPKELIAKFPAEPRDSARLMVLHRDTG---EIEHRIFRDIVDYLVPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G ++ L +V P+ W V A+P+K +K G L F
Sbjct: 58 LNDTKVIPARLLGR-----LSTGAKVELLLLRQVEPDLWEVMAKPAKKLKTGKELVF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L TV G L+ F + G+ + VG +PLPPYI R+ +
Sbjct: 110 --EGGLRGTVEGYAGEGRRLVRFRVPEGVSFMELLEQVGHVPLPPYIEREERPED--RKL 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHFT LL RL GI + VTLHVG GTF PVKVE+ + H
Sbjct: 166 YQTVFASRPGAVAAPTAGLHFTEELLERLRDKGIIIKTVTLHVGPGTFKPVKVEEVEKHQ 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
M E+ + TA +N K G RIV+VGTT +R LE+A EDG + G TN+FI P
Sbjct: 226 MDYEVYSVPQETALEVNRAKQEGRRIVAVGTTVVRTLESAAGEDGTVKAGEGSTNLFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRF+ VD L++NFHLP+STL+MLVSAF G E+ Y+ A+ YRFYSYGD +
Sbjct: 286 GYRFKVVDALVTNFHLPRSTLIMLVSAFAGREKVLNAYREAVKEGYRFYSYGDAMFI 342
>gi|153816035|ref|ZP_01968703.1| hypothetical protein RUMTOR_02281 [Ruminococcus torques ATCC 27756]
gi|317500973|ref|ZP_07959183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|331089128|ref|ZP_08338031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 3_1_46FAA]
gi|145846682|gb|EDK23600.1| hypothetical protein RUMTOR_02281 [Ruminococcus torques ATCC 27756]
gi|316897676|gb|EFV19737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|330405905|gb|EGG85431.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 3_1_46FAA]
Length = 341
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 201/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM V I H+ S++ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSSSRLMTVDKETG---KIGHHVFSEIIDYLNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R + + W +P + K G + F
Sbjct: 58 INDTKVIPARLIGAK----EETGAKIEVLLLKRGADDVWETLVKPGRKAKPGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D + G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGLLVGEVVDIVDEGNRLIHFEYEGI-FEEILDQLGQMPLPPYITHQLQD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YA+ GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D ++H M
Sbjct: 165 NTVYAEHSGSAAAPTAGLHFTPELLRKIEEKGVDIARVTLHVGLGTFRPVKVDDVENHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N K RGGR++ VGTTS R +E+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYMINEEAAEKINHAKDRGGRVICVGTTSCRTIESAADENGRLKACSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKTLDCLITNFHLPESTLIMLVSALAGKEHVMAAYEEAVKERYRFFSFGDAMLIL 341
>gi|295090985|emb|CBK77092.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Clostridium cf. saccharolyticum K10]
Length = 341
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + D+ +LN D +V
Sbjct: 1 MDVKDFYFDLPQELIAQDPLEDRASSRLLVLDRSTG---EVEHRKFRDILEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRKENDIWETLVKPGKKAKPGTVIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ TV+D G L+ FS GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGILKGTVVDVVEEGNRLIQFSYEGI-FEEILDQLGQMPLPPYITHQLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLQEIEDRGVKIAHVTLHVGLGTFRPVKVENVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +NS K GGR++ VGTTS R +E+A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYVVEESEAEKINSTKREGGRVICVGTTSCRTIESASDENGVLKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKILDCLITNFHLPESTLVMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|225573604|ref|ZP_03782359.1| hypothetical protein RUMHYD_01798 [Blautia hydrogenotrophica DSM
10507]
gi|225039043|gb|EEG49289.1| hypothetical protein RUMHYD_01798 [Blautia hydrogenotrophica DSM
10507]
Length = 341
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 198/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R S+RL+ + IS D+ +L D +V
Sbjct: 1 MKTSDFYYELPQELIAQDPLEDRSSSRLLHLDRRTG---EISHGTFQDILTYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K K G L F
Sbjct: 58 INDTKVIPARLFGRK----EDTGAVIELLLLKRRENDVWETLVKPGKKAKVGTKLIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ++D G L+ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGILCGEILDVVEEGNRLIQFQYEGI-FEEILDQLGEMPLPPYITHKLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL R+ +G+K+ VTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTPELLQRVKEMGVKIAHVTLHVGLGTFRPVKVEDVAEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A +N K GGR++ VGTTS R LE+AT E+G + SG+T IFI PG
Sbjct: 225 HSEFYVVEQEQAALVNETKRNGGRVICVGTTSCRTLESATDEEGKLQAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSAF G E+ Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKIMDGLITNFHLPESTLLMLVSAFAGKEKIMAAYKEAVRERYRFFSFGDAMFI 340
>gi|164687536|ref|ZP_02211564.1| hypothetical protein CLOBAR_01177 [Clostridium bartlettii DSM
16795]
gi|164603310|gb|EDQ96775.1| hypothetical protein CLOBAR_01177 [Clostridium bartlettii DSM
16795]
Length = 341
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP IA P+ R S++LMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFNFDLPEELIAQVPIKDRTSSKLMVLDKETG---EIEHRIFRDIIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNDTRVIPARLIGSKV----ETGGKIEFLLLKRTEDDTWETLVKPGKRAKIGARFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V+ G ++ F +GI E + +G +PLPPYI K + Y
Sbjct: 111 -GDGKLIAEVVGMGEDGARIVKFEYNGI-FEEILDELGNMPLPPYITEK----LDERERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKV+D D+H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLAKIKEKGVDLAFVTLHVGLGTFRPVKVDDVDNHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K+ G R++SVGTTS R +E+ E+GI+ SG+TNIFI PG
Sbjct: 225 HSEFYMVTQEAADKINKAKANGNRVISVGTTSTRTIESVADENGIVKATSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ +D L++NFHLP+STL+MLVS+ G E Y A+ YRF+S+GD +
Sbjct: 285 YKWKVIDNLITNFHLPESTLIMLVSSLAGKEHVLNAYNEAVKERYRFFSFGDAMFI 340
>gi|283795917|ref|ZP_06345070.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. M62/1]
gi|291076554|gb|EFE13918.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. M62/1]
Length = 341
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + D+ +LN D +V
Sbjct: 1 MDVKDFYFDLPQELIAQDPLEDRASSRLLVLDRSTG---EVEHRKFRDILEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRKENDIWETLVKPGKKAKPGTVIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ TV+D G L+ FS GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGILKGTVVDVVEEGNRLIQFSYEGI-FEEILDQLGQMPLPPYITHQLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLQEIEDRGVKIAHVTLHVGLGTFRPVKVENVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +NS K GGR++ VGTTS R +E+A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYVVEKSEAEKINSTKREGGRVICVGTTSCRTIESASDENGVLKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKILDCLITNFHLPESTLVMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|307692339|ref|ZP_07634576.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcaceae bacterium D16]
Length = 341
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+ + + + H +LP FL D +V
Sbjct: 1 MKTSDFDFYLPEELIAQTPLERRDASRLLTLDKHTGA---VEHHHFYELPQFLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G R L + W RP + +K G + F
Sbjct: 58 LNNSRVIPARLIGHR-----PTGGVCEVLLLVDKGDKCWECLVRPGRKLKPGAQVIFGDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L AT+ + + G+ L+ F GI + +G +PLPPYI + +D Y
Sbjct: 113 ---TELTATIEKELDDGKRLVRFHYEGI-FLEILERLGKMPLPPYIK----AELQDNERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL ++ +G+KV +VTLHVG GTF PVK ED DH M
Sbjct: 165 QTVYSKVVGSAAAPTAGLHFTPELLEKVQEMGVKVCYVTLHVGLGTFRPVKAEDIQDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K GGR++ VGTTS R +E+ EDG + SG+TNIFI PG
Sbjct: 225 HSEYCMISQETADVINETKKNGGRVICVGTTSCRTIESFAAEDGTMTERSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YRFKVLDALITNFHLPESTLIMLVSALAGREHVLAAYEEAVRERYRFFSFGDAMFI 340
>gi|291546236|emb|CBL19344.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus sp. SR1/5]
Length = 341
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM + I +D+ +L+ D +V
Sbjct: 1 MKTSDFYYDLPQELIAQDPLEDRSSSRLMHLSLKDGS---IEHRHFTDILDYLHKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYGHK----EETGALIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGILKGEIIDIVDEGNRLIQFHYEGI-FEEILDQLGEMPLPPYITHKLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTPELLEKVKEKGVNIAHVTLHVGLGTFRPVKVDDVEKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+A EDGI+ SG+T IFI PG
Sbjct: 225 HSEFYIVEEDQAKLINDTKKNGGRVISVGTTSCRTLESAAGEDGIVKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 YKFKAIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMMI 340
>gi|51892303|ref|YP_074994.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Symbiobacterium thermophilum IAM 14863]
gi|81610582|sp|Q67Q93|QUEA_SYMTH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51855992|dbj|BAD40150.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Symbiobacterium thermophilum IAM 14863]
Length = 341
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 213/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP IA +PV PRD++RLMVVH I DLP +L D +V
Sbjct: 1 MRLSDFDYDLPKELIAQKPVEPRDASRLMVVHRASGA---IEHRCFRDLPEYLRPGDGLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+V+ A+L G R + + L R+ + W +P K + G+ + F
Sbjct: 58 INETRVMPARLLGSR----EQTGGAMEVLLLKRLDRDRWETLVKPGKKARPGERIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L TV+ + G ++ F G+ E + +G +PLPPYI + + Y
Sbjct: 111 -GDGLLVGTVVGPTDYGGRVIDFHYEGV-FENLLERLGQMPLPPYIHEQ----LEEPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT+ LL RL + G++++ +TLHVG GTF PV+VED H M
Sbjct: 165 QTVYAREWGSAAAPTAGLHFTAELLDRLAARGVEIHRITLHVGLGTFRPVEVEDPTQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+V+ GGR+V+VGTTS+R LET EDG + P G+T+IFI PG
Sbjct: 225 HSEFYHVSPEAAAGINAVRKGGGRLVAVGTTSVRTLETVADEDGTVRPGEGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+AVD L++NFHLPKSTLLMLVSA G + + Y+ A++ YRF+S+GD L+
Sbjct: 285 YRFKAVDALVTNFHLPKSTLLMLVSALAGHDLIMRAYREAVAQRYRFFSFGDAMLIL 341
>gi|254518553|ref|ZP_05130609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. 7_2_43FAA]
gi|226912302|gb|EEH97503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. 7_2_43FAA]
Length = 342
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P+ RDS+RLMV+ N I D+ +LN D +V
Sbjct: 1 MKVSDFDFDLPEELIAQHPLEKRDSSRLMVLDKNTG---EIEHKSFHDVIEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P K K G F
Sbjct: 58 LNNTRVMPARLIGEK----EGTGGKIEFLLLKRIEGDRWECLAKPGKRAKVGQKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L TV+D G ++ FS GI E+ + +G +PLPPYI K Y
Sbjct: 111 -GEGKLICTVVDIVEEGNRIIEFSYEGI-FEQVLDELGEMPLPPYITEKLED----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PVKVED ++HIM
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKAKGVNIAYLTLHVGLGTFRPVKVEDINEHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A +N K RG ++++VGTTS R LET ++G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDNENADLINETKKRGNKVIAVGTTSTRTLETIGDDNGFVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ +D L++NFHLP+STL+MLVSA G E Y A+ YRF+S+GD+ L+
Sbjct: 285 YKYKVIDELITNFHLPESTLIMLVSALAGKEHVMNAYNEAVKEKYRFFSFGDSMLI 340
>gi|325660922|ref|ZP_08149549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 4_1_37FAA]
gi|325472429|gb|EGC75640.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 4_1_37FAA]
Length = 341
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+FDLP IA P+ R S+RL+V+ H+ ++ +L + D +V
Sbjct: 1 MRKEDFNFDLPEELIAQDPLEDRSSSRLLVLDKETGKT---EHHVFREIIDYLEAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKIG----TDAKIEVLLLKRKENDVWETLVKPGKKAKIGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGLLVGEVVDIVEEGNRLIHFEYEGI-FEEILDRLGQMPLPPYITHQLED----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLKKIEEKGVQIARVTLHVGLGTFRPVKVDNILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N+ K+ G R+++VGTTS R +E+A EDG I P SG+T+IFI PG
Sbjct: 225 HSEFYQIEEEAAEKINTAKANGKRVIAVGTTSCRTIESAAKEDGTIAPVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD +
Sbjct: 285 YQFKVLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIKERYRFFSFGDAMFI 340
>gi|167766704|ref|ZP_02438757.1| hypothetical protein CLOSS21_01210 [Clostridium sp. SS2/1]
gi|317497532|ref|ZP_07955851.1| tRNA ribosyltransferase-isomerase [Lachnospiraceae bacterium
5_1_63FAA]
gi|167711641|gb|EDS22220.1| hypothetical protein CLOSS21_01210 [Clostridium sp. SS2/1]
gi|316895215|gb|EFV17378.1| tRNA ribosyltransferase-isomerase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 342
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 201/358 (56%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R S+RL+ + N I + ++ +L D +V
Sbjct: 1 MKVSDFTFDLPEELIAQDPLEDRSSSRLLTLDKNTG---EIGHDVFHNIVNYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + ++ L R N W +P K + G + F
Sbjct: 58 LNNTKVIPARLIGAK----EETGGKVEVLLLKRKQDNVWETLVKPGKKARPGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L VID + G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGKLVGEVIDVVDEGNRLVKFEYEGI-FEEVLDELGQMPLPPYITHQLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+ + +VTLHVG GTF PVKV+D +H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQIKDMGVNIAYVTLHVGLGTFRPVKVDDVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N K GGR++SVGTTS R LE+ EDG ++ SG+T+IFI PG
Sbjct: 225 HSEFYRIEEEDAELINETKKNGGRVISVGTTSTRTLESVAEEDGTLHAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+F+ +D L++NFHLP+STLLMLVSA G E Y A+ YRF+S+GD +
Sbjct: 285 YKFKVIDGLITNFHLPESTLLMLVSALAGREHILNAYNIAVKERYRFFSFGDAMFIHP 342
>gi|331085363|ref|ZP_08334449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 9_1_43BFAA]
gi|330408146|gb|EGG87636.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 9_1_43BFAA]
Length = 341
Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+FDLP IA P+ R S+RL+V+ H+ ++ +L D +V
Sbjct: 1 MRKEDFNFDLPEELIAQDPLEDRSSSRLLVLDKETGKT---EHHVFREIIEYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKIG----TDAKIEVLLLKRKENDVWETLVKPGKKAKIGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGLLVGEVVDIVEEGNRLIHFEYEGI-FEEILDRLGQMPLPPYITHQLED----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLKKIEEKGVQIARVTLHVGLGTFRPVKVDNILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N+ K+ G R+++VGTTS R +E+A EDG I P SG+T+IFI PG
Sbjct: 225 HSEFYQIEEEAAEKINTAKANGKRVIAVGTTSCRTIESAVKEDGTIAPVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD +
Sbjct: 285 YQFKVLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIKERYRFFSFGDAMFI 340
>gi|255283315|ref|ZP_05347870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bryantella
formatexigens DSM 14469]
gi|255266169|gb|EET59374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bryantella
formatexigens DSM 14469]
Length = 341
Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ + H+ ++ +LN D +V
Sbjct: 1 MKTSDFYFDLPQELIAQDPLEDRSSSRLLVLDRRTG---QMEHHIFKEIVHYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLFGSKVG----TDAKIEILLLKRREGDVWETLVKPGKKAKPGTQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V++ G L+ F+ GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGILMGEVLEVAEDGNRLIRFTYEGI-FEEILDRLGQMPLPPYITHQLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVKVE+ H M
Sbjct: 165 QTVYAKHDGSAAAPTAGLHFTPELLQEIRDKGVNIAHVTLHVGLGTFRPVKVEEVTQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GG+I+ VGTTS R +E+A E+GI++ SG+T+IFI PG
Sbjct: 225 HSEFYMVEEEQAELINRTKANGGKIICVGTTSCRTIESAADENGILHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STLLMLVSA G E +K Y A+ YRF+S+GD L+
Sbjct: 285 YRFKILDELITNFHLPESTLLMLVSALAGKENIEKAYAEAVKERYRFFSFGDAMLI 340
>gi|291542712|emb|CBL15822.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus bromii L2-63]
Length = 341
Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PRDS+RL+V+ + D+ +LN D +V
Sbjct: 1 MKTSDFYYDLPKELIAQTPLEPRDSSRLLVLDREKQT---LEHKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ ++ L +V+ N W +P K K G F
Sbjct: 58 ANDSRVLPARIYGIKD----ETGAKVEFLLLKQVANNRWETLCKPGKKAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ATV++ + G ++ F + +G +PLPPYI + +D Y
Sbjct: 111 -GNGILRATVVEVKDDGNRIVDFD-CEENFFTTLDKIGQMPLPPYIT----AELKDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ GS AAPTAGLHFT+ L+ R+ + GIK+ +VTLHVG GTF PVKV+D H M
Sbjct: 165 QTVYSHELGSAAAPTAGLHFTTELMDRIKAKGIKIAYVTLHVGLGTFRPVKVDDVTKHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N K GGR+++VGTTS R LE+ G + P GFT+IFI PG
Sbjct: 225 HSEHYEVPEETAKLINETKKNGGRVIAVGTTSCRTLESVAAMYGEVKPCEGFTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ +D L++NFHLP+STL+MLVSAF G + Y+ A+ YRF+S+GD +
Sbjct: 285 FEFKVLDGLITNFHLPESTLIMLVSAFAGYDFIMNAYKEAVKEKYRFFSFGDAMFI 340
>gi|168208647|ref|ZP_02634272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens B str. ATCC 3626]
gi|170713009|gb|EDT25191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens B str. ATCC 3626]
Length = 341
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTG---EIEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEKLED----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGNRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|18310928|ref|NP_562862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens str. 13]
gi|110799784|ref|YP_696626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens ATCC 13124]
gi|168204870|ref|ZP_02630875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens E str. JGS1987]
gi|168214133|ref|ZP_02639758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens CPE str. F4969]
gi|168215572|ref|ZP_02641197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens NCTC 8239]
gi|182624446|ref|ZP_02952230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens D str. JGS1721]
gi|21263867|sp|Q8XJ15|QUEA_CLOPE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123344605|sp|Q0TP14|QUEA_CLOP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|18145610|dbj|BAB81652.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens str. 13]
gi|110674431|gb|ABG83418.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens ATCC 13124]
gi|170663657|gb|EDT16340.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens E str. JGS1987]
gi|170714349|gb|EDT26531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens CPE str. F4969]
gi|177910449|gb|EDT72826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens D str. JGS1721]
gi|182382391|gb|EDT79870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens NCTC 8239]
Length = 341
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTG---EIEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEKLED----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|254780180|ref|YP_003064593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter asiaticus str. psy62]
gi|254039857|gb|ACT56653.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter asiaticus str. psy62]
Length = 360
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV
Sbjct: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ
Sbjct: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY
Sbjct: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM
Sbjct: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG
Sbjct: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR
Sbjct: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
>gi|266622484|ref|ZP_06115419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
hathewayi DSM 13479]
gi|288865792|gb|EFC98090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
hathewayi DSM 13479]
Length = 365
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 212/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F+F+LP IA P+ R S+RL+V+ I D+ ++L D +V
Sbjct: 1 MNVKDFNFELPQELIAQDPLEDRSSSRLLVLDKKTG---EIEHRTFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ E +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----EGTEAKIEILLLKRRENDIWETLVKPGKKAKIGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV+D + G L+ FS GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGLLTGTVVDIVDEGNRLIQFSYEGI-FEEILDRLGQMPLPPYITHQLKDQ----TRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ + ++G+ + VTLHVG GTF PVKV++ +DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLAEIEAMGVVIAHVTLHVGLGTFRPVKVDEIEDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K GGRIV VGTTS R +E+A+++DG++ SG+T IFI PG
Sbjct: 225 HSEFYIVDEAEAKKVNDTKKNGGRIVCVGTTSCRTVESASSDDGVLKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD +
Sbjct: 285 YRFKTLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIRERYRFFSFGDAMFIT 341
>gi|169343759|ref|ZP_02864758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens C str. JGS1495]
gi|169298319|gb|EDS80409.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens C str. JGS1495]
Length = 341
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTG---EIEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEKLED----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEVGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|307266566|ref|ZP_07548098.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter wiegelii Rt8.B1]
gi|306918420|gb|EFN48662.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 341
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ + + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRSSSRLMVLNRKTG---EVQHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R +I L R+S N W +P + K G + F
Sbjct: 58 LNDTKVIPARLIGRR----QDSGGKIEFVLLKRLSVNEWETLVKPGRRAKVGTRVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++D G ++ F G+ E + +G +P+PPYI +K Y
Sbjct: 111 -GNGELVAEILDNTEVGGRVVRFYYEGV-FEEVLDKLGEMPVPPYIKKKLKD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEIIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N+ + +GGR+++VGTTS R LET E+G I SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAAEEINATREKGGRVIAVGTTSTRTLETVADENGYIREKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYQVAIEERYRFFSFGDAMLII 341
>gi|154483721|ref|ZP_02026169.1| hypothetical protein EUBVEN_01425 [Eubacterium ventriosum ATCC
27560]
gi|149735631|gb|EDM51517.1| hypothetical protein EUBVEN_01425 [Eubacterium ventriosum ATCC
27560]
Length = 380
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 155/356 (43%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++ +DLP IA P+ R S+RLMV+ + I H+ D+ +LN ND +V
Sbjct: 39 MSLHDYYYDLPEELIAQDPLEDRSSSRLMVLDKDTG---EIEHHIFKDIIDYLNPNDCLV 95
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 96 INDTKVIPARLYGSKVG----TDAKIEVLLLKRKENDVWETLVKPGKKCKPGTVISF--- 148
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F+ GI E + +G +PLPPYI K Y
Sbjct: 149 -GDGILTGEVIDVVEEGNRLIKFTYEGI-FEEVLDKLGEMPLPPYITHKLED----KNRY 202
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ GIK+ VTLHVG GTF PVKVE+ +H M
Sbjct: 203 QTVYAKYEGSAAAPTAGLHFTKELLEKIKEKGIKIAHVTLHVGLGTFRPVKVENILEHHM 262
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A +N ++ GGR+++VGTTS R LET T E+GI++ SG+T IFI PG
Sbjct: 263 HSEFYMVDEEDANMINECRANGGRVIAVGTTSTRTLETVTDENGIVHSGSGWTQIFIYPG 322
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y A+ YRF+S+GD +
Sbjct: 323 YQFKAIDCLITNFHLPESTLLMLVSALAGRENVLNAYNKAVEEKYRFFSFGDAMFI 378
>gi|239624077|ref|ZP_04667108.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522108|gb|EEQ61974.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 358
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + + D+ +L D +V
Sbjct: 10 MDVKDFYFDLPEELIAQDPLKDRSSSRLLVLDKDTG---EVQHRVFRDIVEYLRPGDCLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ +I L R + W RP K + G ++ F
Sbjct: 67 INDTKVIPARLFGVK----KDTGAKIEVLLLKRRENDIWETLVRPGKKCRPGTVIEF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV++ + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 120 -GEGLLSGTVVETVDDGNRLIRFSYKGI-FEEILDQLGQMPLPPYITH----ELKDKNRY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ +G+++ VTLHVG GTF PVKVE+ DH M
Sbjct: 174 QTVYAKHEGSAAAPTAGLHFTNELLKQIEDMGVRIAHVTLHVGLGTFRPVKVENVLDHHM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GGR++ VGTTS R +E+A+T+DGI+ +G+T IFI PG
Sbjct: 234 HSEFYVVEESEAKKVNDTKAAGGRVICVGTTSCRTVESASTDDGILQAKTGWTEIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 294 YRFKVLDALITNFHLPESTLVMLVSALAGREHILDAYKEAVRERYRFFSFGDAMFI 349
>gi|110802898|ref|YP_699223.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens SM101]
gi|123047252|sp|Q0SRN4|QUEA_CLOPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110683399|gb|ABG86769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens SM101]
Length = 341
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTG---EIEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEKLED----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT +LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEDLLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|166032600|ref|ZP_02235429.1| hypothetical protein DORFOR_02315 [Dorea formicigenerans ATCC
27755]
gi|166026957|gb|EDR45714.1| hypothetical protein DORFOR_02315 [Dorea formicigenerans ATCC
27755]
Length = 341
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 196/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F +DLP IA P+ R S+RL+V+ S H+ ++ +L D +V
Sbjct: 1 MKRQDFYYDLPEELIAQDPLEDRSSSRLLVLDKETGAT---SHHIFKEITGYLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R N W +P K K G + F
Sbjct: 58 INDTKVIPARLIGAK----EGTGAKIEILLLKRKENNIWETLVKPGKKAKVGTRIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+ G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGLLVGEVVGIVEEGNRLVKFEYEGI-FEEILDQLGQMPLPPYITHQLED----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + GI + VTLHVG GTF PVKV++ DH M
Sbjct: 165 QTVYAKHTGSAAAPTAGLHFTPELLKEIEEKGIDIARVTLHVGLGTFRPVKVDEITDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R++ VGTTS R +E+A E G + P SG+T IFI PG
Sbjct: 225 HSEFYQVDEEAAEKINRAKDSGHRVICVGTTSCRTIESAADETGHLKPTSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKILDGLITNFHLPESTLIMLVSALAGREHVLAAYEEAVQERYRFFSFGDAMLI 340
>gi|255101975|ref|ZP_05330952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-63q42]
gi|255307843|ref|ZP_05352014.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile ATCC 43255]
Length = 341
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYIT----ARLDEKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGKNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|326390116|ref|ZP_08211677.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus JW 200]
gi|325993764|gb|EGD52195.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus JW 200]
Length = 341
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ + + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRSSSRLMVLNRKTG---EVQHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R +I L R+S N W +P + K G + F
Sbjct: 58 LNDTKVIPARLIGRR----QDSGGKIEFVLLKRLSVNEWETLVKPGRRAKVGTRVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++D G ++ F G+ E + +G +P+PPYI +K Y
Sbjct: 111 -GNGELVAEILDNTEVGGRVVRFYYEGL-FEEVLDKLGEMPVPPYIKKKLKD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEIIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N+ + +GGR+++VGTTS R LET E+G I SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAAEEINATREKGGRVIAVGTTSTRTLETVADENGYIREKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ AI YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAIEERYRFFSFGDAMLII 341
>gi|210616166|ref|ZP_03290969.1| hypothetical protein CLONEX_03188 [Clostridium nexile DSM 1787]
gi|210149928|gb|EEA80937.1| hypothetical protein CLONEX_03188 [Clostridium nexile DSM 1787]
Length = 353
Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 198/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R S+RL+V+ + H+ ++ +L D +V
Sbjct: 13 MRKEDFYFDLPEELIAQDPLEDRSSSRLLVLDKETG---KVEHHVFREIIDYLQEGDCLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 70 INDTKVIPARLIGSKIG----TDAKIEVLLLKRKENDVWETLVKPGKKAKVGTRISF--- 122
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI + Y
Sbjct: 123 -GDGLLVGEVVDIVEEGNRLIHFEYEGI-FEEILDQLGQMPLPPYITHQLED----KNRY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ VTLHVG GTF PVKV++ +H M
Sbjct: 177 QTVYAKHSGSAAAPTAGLHFTPELLKEIEEKGVQIARVTLHVGLGTFRPVKVDNILEHHM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A+ +N K G R++ VGTTS R +E+A ++G ++ +G+T IFI PG
Sbjct: 237 HSEFYQIDEEAAEKINRAKESGHRVICVGTTSCRTIESAADKNGKLHATNGWTEIFIYPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E+ Y+ A+ YRF+S+GD +
Sbjct: 297 YEFKVLDCLITNFHLPESTLVMLVSALAGREQVLSAYEEAVKEKYRFFSFGDAMFI 352
>gi|254976399|ref|ZP_05272871.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-66c26]
gi|255093785|ref|ZP_05323263.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CIP 107932]
gi|255315536|ref|ZP_05357119.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-76w55]
gi|255518199|ref|ZP_05385875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-97b34]
gi|255651315|ref|ZP_05398217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-37x79]
gi|260684379|ref|YP_003215664.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CD196]
gi|260688038|ref|YP_003219172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile R20291]
gi|306521147|ref|ZP_07407494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-32g58]
gi|260210542|emb|CBA65071.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CD196]
gi|260214055|emb|CBE06218.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile R20291]
Length = 341
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFLYDGI-FEEILDELGNMPLPPYIT----ARLDEKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGNNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|260438605|ref|ZP_05792421.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Butyrivibrio crossotus DSM 2876]
gi|292809196|gb|EFF68401.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Butyrivibrio crossotus DSM 2876]
Length = 341
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K F++DLP IA P+ R S+RLMV+H + I + D+ +LN D +V
Sbjct: 1 MDLKAFNYDLPEELIAQDPLEDRSSSRLMVLHKDTG---RIEHKIFRDIIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G++ I L R + + W +P K + G + F
Sbjct: 58 INDTKVIPARLMGIK----EDTGAAIEVLLLKRNADDVWECLVKPGKKARTGARIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L ++D G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GEGLLVGEIVDVIEDGNRMIKFHYEGI-FEEILDKLGQMPLPPYITHKLQD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ V +TLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLEKIKEKGVNVVSITLHVGLGTFRPVKVDKIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I A +N ++ GGR+++VGTTS R LE+A +DG I SG T+IFI PG
Sbjct: 225 HTETFNISKEAADTINRTRAAGGRVIAVGTTSCRTLESAAADDGTIPARSGDTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STL+MLVSA G + Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKAIDCLITNFHLPESTLIMLVSALAGRDNIMNAYETAVKERYRFFSFGDAMFI 340
>gi|255656788|ref|ZP_05402197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-23m63]
gi|296452383|ref|ZP_06894084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP08]
gi|296877731|ref|ZP_06901758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP07]
gi|296258713|gb|EFH05607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP08]
gi|296431264|gb|EFH17084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP07]
Length = 341
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLMGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYIT----ARLDEKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LLS++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLSKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGNNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|226323649|ref|ZP_03799167.1| hypothetical protein COPCOM_01424 [Coprococcus comes ATCC 27758]
gi|225207833|gb|EEG90187.1| hypothetical protein COPCOM_01424 [Coprococcus comes ATCC 27758]
Length = 341
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R S+RL+V+ S H+ ++ +L D +V
Sbjct: 1 MKRQDFYFDLPEELIAQDPLEDRSSSRLLVLDKKTGAT---SHHIFREIKDYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + ++ L R + W +P K +K G + F
Sbjct: 58 INDTKVIPARLIGEK----EGTGGKVEVLLLKRKGNDVWETLVKPGKKMKPGARVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ V++ G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGLLKGEVLEVVEEGNRLIHFEYEGI-FEEILDQLGQMPLPPYITHQLED----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ VTLHVG GTF PVK +D DH M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLEEIKAEGVEIAHVTLHVGLGTFRPVKADDILDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+A A+ +N K G R++ VGTTS R +E+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYRIEASEAEKINRAKESGHRVICVGTTSCRTVESAADENGKLKECSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKVLDCLITNFHLPESTLIMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|89895210|ref|YP_518697.1| hypothetical protein DSY2464 [Desulfitobacterium hafniense Y51]
gi|219669641|ref|YP_002460076.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfitobacterium hafniense DCB-2]
gi|122482413|sp|Q24UN9|QUEA_DESHY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764274|sp|B8FQV3|QUEA_DESHD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|89334658|dbj|BAE84253.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539901|gb|ACL21640.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfitobacterium hafniense DCB-2]
Length = 341
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 210/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF+LP RIA PV PRDS+RLMV++ I + +LP L + D +V
Sbjct: 1 MKLEDFDFELPEDRIAQHPVEPRDSSRLMVMNRWTG---EIEHRVFRELPELLQAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + + +I C L R + W +P K +K G + F
Sbjct: 58 VNNTRVIPARLIGEK----EGTQAKIECLLLTRRDKDVWETLIKPGKRLKAGQTVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L +++ G L+ F+ GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGLLRGELLEILPDGNRLVRFNYQGI-FEEVLDQLGNMPLPPYITEQLQD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL RL G+++ + LHVG GTF PVKVE+ ++H M
Sbjct: 165 QTIYAKESGSAAAPTAGLHFTPELLERLQDKGVEIVEILLHVGLGTFRPVKVENVEEHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N KS+G R+++VGTT+ R LE+ E+G I G+T+I+I PG
Sbjct: 225 HSEYYRVTPDAAERINRAKSQGRRVIAVGTTASRTLESVAGENGRIEGKEGWTDIYIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFH PKSTL+MLVSA G ++ K YQ AI+ YRFYS+GD ++
Sbjct: 285 YTFKILDGLITNFHFPKSTLVMLVSALAGRDQILKAYQIAIAEGYRFYSFGDAMMIL 341
>gi|125973476|ref|YP_001037386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
thermocellum ATCC 27405]
gi|256005374|ref|ZP_05430339.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 2360]
gi|281417678|ref|ZP_06248698.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum JW20]
gi|166216717|sp|A3DE14|QUEA_CLOTH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|125713701|gb|ABN52193.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Clostridium thermocellum ATCC 27405]
gi|255990693|gb|EEU00810.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 2360]
gi|281409080|gb|EFB39338.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum JW20]
gi|316940286|gb|ADU74320.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 1313]
Length = 341
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 154/356 (43%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F +DLP IA PV RD +RLMV+ IS D+ ++N D +V
Sbjct: 1 MKVSDFYYDLPQELIAQEPVEKRDMSRLMVLDKETG---KISHKRFKDIVEYINKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + +I L R++ + W V +P K K G F
Sbjct: 58 LNDTRVIPARLLGEK----EGTGGKIEFVLLKRINGDVWEVILKPGKKAKPGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI+ G L+ F GI E + +G +PLPPYI +K Y
Sbjct: 111 -GNGELKAEVIEIVEEGNRLVRFEYDGI-FEEILDRIGIVPLPPYITKKLDD----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL L G+K+ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 165 QTVYSRYKGSAAAPTAGLHFTLELLEELAGRGVKIAYVTLHVGLGTFRPVKVENLEEHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +NS K GG+I++VGTTS R+LET E+GI+ P SG+T+IFI PG
Sbjct: 225 HSEFYRIKEEDCDKINSTKQNGGKIIAVGTTSCRVLETVGDENGIVRPQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G E+ + Y A+ YRF+S+GD +
Sbjct: 285 YKFKVVDSLITNFHLPESTLIMLVSALAGREKILEAYNIAVKERYRFFSFGDAMFI 340
>gi|121535582|ref|ZP_01667389.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermosinus carboxydivorans Nor1]
gi|121305822|gb|EAX46757.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermosinus carboxydivorans Nor1]
Length = 339
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 200/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FD+ LP IA +P PRD +RL+V+ I +LP +L D +V
Sbjct: 1 MLVTDFDYYLPEELIAQQPCEPRDHSRLLVLDRRTGN---IEHRRFYNLPDYLQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + +I L R++ + W +P K + G + F +
Sbjct: 58 FNNTKVIPARLIGAKAG----TGGKIEVFLLNRLTSDEWETLVKPGKRARPGTQVVFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++ + G ++ F+ SG+ E + +G PLPPYI + Y
Sbjct: 114 -----LSCEILASTDYGGRIVRFNYSGV-FEDILDRLGETPLPPYIKTRLAD----KDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL R+ + GI + F+TLHVG GTF PV V + H M
Sbjct: 164 QTVYAKERGSAAAPTAGLHFTPELLDRIKAKGINLAFITLHVGLGTFRPVTVSNITQHTM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + TA +N K GGRI++VGTT++R LET G + SG+T+IFI PG
Sbjct: 224 HREYYSVSPETAALINQTKQAGGRIIAVGTTAVRTLET-VGAGGFVESGSGWTDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ VD L++NFHLP+STLLMLVSA G E Y A+ YRF+S+GD L+
Sbjct: 283 YRFKIVDALVTNFHLPQSTLLMLVSALAGRENIMNAYHVAVREKYRFFSFGDAMLIL 339
>gi|291562523|emb|CBL41339.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[butyrate-producing bacterium SS3/4]
Length = 341
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+F+LPP IA P+ R ++RL+V+ I D+ +L D +V
Sbjct: 1 MNVTDFNFELPPELIAQDPLEDRAASRLLVLDKKTG---EIEHRHFRDILKYLKKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + I L R S N W +P K +K G + F
Sbjct: 58 INDTKVIPARLMGHKIG----TDAGIEVLLLKRKSDNVWETLVKPGKKMKVGAEVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ VID + G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGLLKGKVIDVVDEGNRLIQFEYDGI-FEEILDKLGQMPLPPYITHQLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + +G+K+ VTLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLQEIEEMGVKIAHVTLHVGLGTFRPVKVDTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GGR++ VGTTS R LE+AT +DGI+ SG+T IFI PG
Sbjct: 225 HSEFYMVEESEAKKINDTKANGGRVICVGTTSCRTLESATGDDGILKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E YQ AI YRF+S+GD +
Sbjct: 285 YKFKILDCLITNFHLPESTLVMLVSALAGREHILNAYQEAIKERYRFFSFGDAMFI 340
>gi|148381020|ref|YP_001255561.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 3502]
gi|153931608|ref|YP_001385391.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 19397]
gi|153935623|ref|YP_001388798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. Hall]
gi|166216714|sp|A7FY18|QUEA_CLOB1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216715|sp|A5I6F0|QUEA_CLOBH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148290504|emb|CAL84632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 3502]
gi|152927652|gb|ABS33152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 19397]
gi|152931537|gb|ABS37036.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. Hall]
Length = 341
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPIEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGAK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLDD----KEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKVEDIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGAIEGKVGEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|253681405|ref|ZP_04862202.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum D str. 1873]
gi|253561117|gb|EES90569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum D str. 1873]
Length = 341
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV I + D+ + N D +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDESRLMVVDRKSG---HIEHKIFKDILGYFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDKWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GSGELKAEVKGMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITEKLDD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+K+ FVTLHVG GTF PVKVED ++H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTKELLKEIENKGVKIAFVTLHVGLGTFRPVKVEDIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K GG++++VGTTS R LET E+G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETADIINKTKENGGKVIAVGTTSCRTLETIGDENGKVKETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ YRF+S+GD L
Sbjct: 285 YKFKIVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVDEKYRFFSFGDAMFL 340
>gi|331091476|ref|ZP_08340314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 2_1_46FAA]
gi|330404032|gb|EGG83582.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 2_1_46FAA]
Length = 341
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F F+LP IA P+ R +RL+V+ H+ ++ +L D +V
Sbjct: 1 MKREDFYFELPEELIAQDPLEDRSGSRLLVLDKETGKT---EHHIFKEIVNYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVLPARLIGSKVG----TDAKIEVLLLKRRENDVWETLVKPGKKAKVGTKIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ LE VID + G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGLLEGEVIDIVDEGNRLIQFHYEGI-FEEVLDQLGQMPLPPYITHQLED----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + +K+ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHTGSAAAPTAGLHFTEELLEEIAKKNVKIARVTLHVGLGTFRPVKVDNILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A+ +N K +G R++ VGTTS R +E+A E+G + SG+T+IFI PG
Sbjct: 225 HSEFYQIDEEAARKINETKEQGHRVICVGTTSCRTVESAADENGRLQATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKILDCLITNFHLPESTLIMLVSALAGRENVLAAYEEAVRERYRFFSFGDAMFI 340
>gi|295109865|emb|CBL23818.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus obeum A2-162]
Length = 341
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 199/357 (55%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RL+ + +D+ +L D +V
Sbjct: 1 MKTSDFYYDLPKELIAQDPLEDRSSSRLLHL---SMEDGSFEHRHFTDILDYLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + I L R + W +P K + G + F
Sbjct: 58 INDTRVIPARLYGHK----EETGALIEILLLKRKENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L +ID + G L+ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGILTGEIIDIVDEGNRLIQFHYDGI-FEEILDQLGEMPLPPYITHKLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ ++ G+K+ VTLHVG GTF PVKV++ + H M
Sbjct: 165 QTVYAKNDGSAAAPTAGLHFTKELMKQVEEKGVKIAHVTLHVGLGTFRPVKVDNVESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+AT E+GI++ SG+T IFI PG
Sbjct: 225 HSEFYMVEEDQAKLINDTKKNGGRVISVGTTSCRTLESATDENGILHAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKMIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMLIL 341
>gi|168187975|ref|ZP_02622610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum C str. Eklund]
gi|169294189|gb|EDS76322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum C str. Eklund]
Length = 341
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 154/356 (43%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV I + D+ +LN D +V
Sbjct: 1 MKVKDFDFYLPQELIAQHPMEKRDESRLMVVDRKSG---QIEHKIFKDILGYLNKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ ++W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDTWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GSGELKAEVRAMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITERLED----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + GIK+ FVTLHVG GTF PVKVED + H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKEKGIKIVFVTLHVGLGTFRPVKVEDIEKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N+ K GG+I++VGTTS R LET E G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETAEIINNTKENGGKIIAVGTTSCRTLETIGDECGKVRETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ + YRF+S+GD L
Sbjct: 285 YKFKVVDRLITNFHLPQSTLLMLVSAFSTRENIMNAYKEAVENKYRFFSFGDAMFL 340
>gi|167040096|ref|YP_001663081.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X514]
gi|300914179|ref|ZP_07131495.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X561]
gi|307724585|ref|YP_003904336.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X513]
gi|238687548|sp|B0K0M0|QUEA_THEPX RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166854336|gb|ABY92745.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X514]
gi|300889114|gb|EFK84260.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X561]
gi|307581646|gb|ADN55045.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X513]
Length = 341
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLM+++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRASSRLMILNKKTG---EIEHDIFKNITKYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G R +I L R+S N W + +P + K G F
Sbjct: 58 LNNTKVIPARLIGRR----EDSGGKIEFVLLKRISNNEWEILVKPGRRAKIGSKFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++D G ++ F G+ E + +G +P+PPYI +K ++ Y
Sbjct: 111 -GNGELIAEILDTTEVGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKK----LKNKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEVIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N + GGRI++VGTTS R LET EDG I SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAAEEINETRKSGGRIIAVGTTSTRTLETVADEDGYIKEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAVEKKYRFFSFGDAMLII 341
>gi|167037429|ref|YP_001665007.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256752587|ref|ZP_05493441.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus CCSD1]
gi|320115842|ref|YP_004186001.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|238687693|sp|B0K958|QUEA_THEP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166856263|gb|ABY94671.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256748525|gb|EEU61575.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus CCSD1]
gi|319928933|gb|ADV79618.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 341
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLM+++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRASSRLMILNKKTG---EIEHDIFKNITKYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G R +I L R+S N W + +P + K G F
Sbjct: 58 LNNTKVIPARLIGRR----EDSGGKIEFVLLKRISNNEWEILVKPGRRAKIGSKFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++D + G ++ F G+ E + +G +P+PPYI +K ++ Y
Sbjct: 111 -GNGELIAEILDTTDVGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKK----LKNKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEVIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N + GGRI++VGTTS R LET EDG I SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAAEEINETRKSGGRIIAVGTTSTRTLETVADEDGYIKEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAVEKKYRFFSFGDAMLII 341
>gi|160893033|ref|ZP_02073821.1| hypothetical protein CLOL250_00571 [Clostridium sp. L2-50]
gi|156865116|gb|EDO58547.1| hypothetical protein CLOL250_00571 [Clostridium sp. L2-50]
Length = 349
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 204/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ RD++RLMV+ I D+ ++L D +V
Sbjct: 9 MQLSDFYYDLPQELIAQDPLLKRDNSRLMVLDREEGT---IEHKHFYDVISYLKEGDCLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R+ +W +P K + G + F
Sbjct: 66 INDTKVIPARLIGEK----EGTGAAIEVLLLKRLDDCTWETLVKPGKKARVGARIIF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L VID G ++ F GI E + +G +PLPPYI K Y
Sbjct: 119 -GGGKLVGEVIDIVEEGNRIVRFEYEGI-FEEILDELGQMPLPPYITHKLED----KNRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL + + GIK+ VTLHVG GTF PVK ++ DH M
Sbjct: 173 QTVYAEHEGSAAAPTAGLHFTKELLEEIKAKGIKIAHVTLHVGLGTFRPVKEDNILDHHM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A+ +N K GGRI++VGTTS R LET E+G++ SG+T+IFI PG
Sbjct: 233 HSEFYVIDEKAAETINETKKNGGRIIAVGTTSTRTLETVADENGMLRACSGWTDIFIYPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D L++NFHLP+STLLMLVSA E+ + Y+ A+ YRF+S+GD L+
Sbjct: 293 YKFKAIDGLITNFHLPESTLLMLVSALYSREKILEAYKVAVEERYRFFSFGDAMLIL 349
>gi|154505813|ref|ZP_02042551.1| hypothetical protein RUMGNA_03353 [Ruminococcus gnavus ATCC 29149]
gi|153793831|gb|EDN76251.1| hypothetical protein RUMGNA_03353 [Ruminococcus gnavus ATCC 29149]
Length = 341
Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 196/357 (54%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R +RL+ + H+ D+ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSGSRLLFLDKETGKT---EHHIFRDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLIGEK----EGTGAKIEVLLLKRGENDVWETLVKPGKKAKPGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+D G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGLLVGEVVDVVEEGNRLIHFEYKGI-FEEILDQLGQMPLPPYITHQLED----RSRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YA +GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVKVED +H M
Sbjct: 165 NTVYAAHEGSAAAPTAGLHFTPKLLKEIQEKGVDIARVTLHVGLGTFRPVKVEDVTEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +DA A+ +N K GGR++ VGTTS R +E+A E+G + P SG+T IFI PG
Sbjct: 225 HSEFYMVDAEAAEKINKAKEHGGRVICVGTTSCRTIESAADENGRLKPCSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 YQFKILDGLITNFHLPESTLIMLVSALAGKEHVMAAYEEAVKERYRFFSFGDAMIIL 341
>gi|153940081|ref|YP_001392347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. Langeland]
gi|166216716|sp|A7GHT7|QUEA_CLOBL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152935977|gb|ABS41475.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. Langeland]
gi|295320339|gb|ADG00717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. 230613]
Length = 341
Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGSK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G LEA VI G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GNGELEAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLDD----KEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKVEDIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGDIEGKVGEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|150016410|ref|YP_001308664.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
beijerinckii NCIMB 8052]
gi|189038514|sp|A6LTM8|QUEA_CLOB8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149902875|gb|ABR33708.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium beijerinckii NCIMB 8052]
Length = 341
Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEQRDSSRLMVLDKKTG---EIKHKKFHDIIEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P K K G F
Sbjct: 58 LNNTRVMPARLIGEK----EGTGGKIEFLLLKRIEKDRWECLAKPGKSAKVGRKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V++ G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGKLKAEVVEVEENGNRIVEFFYDGI-FEEVLDSLGEMPLPPYIHERLED----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL + + GI + ++TLHVG GTF PVKVE ++H M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTKELLQEIKNKGINIVYLTLHVGLGTFRPVKVESLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A +N K RG ++SVGTTS R LET E+G + SG+TNIFI PG
Sbjct: 225 HSEFYMLSKESADIINETKKRGNAVISVGTTSTRTLETIGDENGFVKEQSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A++ YRF+S+GD +
Sbjct: 285 YKFKVVDKLITNFHLPESTLIMLVSTLAGRENVMNAYEEAVNEKYRFFSFGDAMFI 340
>gi|295399351|ref|ZP_06809333.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
thermoglucosidasius C56-YS93]
gi|294978817|gb|EFG54413.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
thermoglucosidasius C56-YS93]
Length = 342
Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIHHETFRNILSYLREGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G + F
Sbjct: 58 LNDTRVMPARLYGEK----ENTGAHIEVLLLKQLEGDRWETLVKPAKRVKAGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT +D G +L FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLQATCVDTLEHGGRVLQFSYRGI-FYEVLEQLGEMPLPPYIKEKLAD----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVNVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TAQ LN K +GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMTEATAQLLNETKRQGGRIIAVGTTSTRTLETIAARHDGTFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSA G E Y A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILHAYNVAVKERYRFFSFGDAMLII 342
>gi|170761651|ref|YP_001788389.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A3 str. Loch Maree]
gi|238688788|sp|B1L0B1|QUEA_CLOBM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169408640|gb|ACA57051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A3 str. Loch Maree]
Length = 341
Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGAK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLDD----KEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIKEKGVKLAFLTLHVGLGTFRPVKVEDIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K +GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKETAEIINDTKEKGGRVIAVGTTSCRTLETIGDIEGKVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|170757777|ref|YP_001782704.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B1 str. Okra]
gi|229598025|sp|B1IMF2|QUEA_CLOBK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169122989|gb|ACA46825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B1 str. Okra]
Length = 341
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGSK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLDD----KEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKVEDIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIADIEGKVGEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGKDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|197303122|ref|ZP_03168167.1| hypothetical protein RUMLAC_01846 [Ruminococcus lactaris ATCC
29176]
gi|197297777|gb|EDY32332.1| hypothetical protein RUMLAC_01846 [Ruminococcus lactaris ATCC
29176]
Length = 342
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 194/356 (54%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RL+V+ H+ ++ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSSSRLLVLDKKTGKT---EHHVFREITDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ +I L R + + W +P K + G + F
Sbjct: 58 LNDTKVIPARLIGVK----EETGAKIEVLLLKRGADDVWETLVKPGKKARPGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V++ G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGLLVGEVMEVVEEGNRLIHFEYDGI-FEEILDQLGQMPLPPYITHQLQD----KDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YA GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVKV+D ++H M
Sbjct: 165 NTVYAAHSGSAAAPTAGLHFTPELLKEIEEKGVDIARVTLHVGLGTFRPVKVDDVENHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K G +++ VGTTS R +E+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYMIDEEAADKINRAKENGHKVICVGTTSCRTIESAADENGKLKACSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKVLDELITNFHLPESTLVMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|168179563|ref|ZP_02614227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum NCTC 2916]
gi|168181759|ref|ZP_02616423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Bf]
gi|226950498|ref|YP_002805589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A2 str. Kyoto]
gi|237796525|ref|YP_002864077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Ba4 str. 657]
gi|254764272|sp|C1FKG0|QUEA_CLOBJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|259551441|sp|C3KTD1|QUEA_CLOB6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|182669806|gb|EDT81782.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum NCTC 2916]
gi|182675035|gb|EDT86996.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Bf]
gi|226842049|gb|ACO84715.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A2 str. Kyoto]
gi|229263462|gb|ACQ54495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Ba4 str. 657]
Length = 341
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKKTGG---IEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGAK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLDD----KEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVE+ +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIKEKGVKLAFLTLHVGLGTFRPVKVENIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K +GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKETAEIINDTKEKGGRVIAVGTTSCRTLETIGDIEGKVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|312110089|ref|YP_003988405.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y4.1MC1]
gi|311215190|gb|ADP73794.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y4.1MC1]
Length = 342
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIRHETFRNILSYLREGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G + F
Sbjct: 58 LNDTRVMPARLYGEK----ENTGAHIEVLLLKQLEGDRWETLVKPAKRVKAGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT +D G +L FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLQATCVDTLEHGGRVLQFSYRGI-FYEVLEQLGEMPLPPYIKEKLAD----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVNVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TAQ LN K +GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMTEATAQLLNETKRQGGRIIAVGTTSTRTLETIAARHDGTFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSA G E Y A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILHAYNVAVKERYRFFSFGDAMLII 342
>gi|322807370|emb|CBZ04944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum H04402 065]
Length = 341
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGSK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLDD----KEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKVEDIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGDIEGKVGEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|225025895|ref|ZP_03715087.1| hypothetical protein EUBHAL_00123 [Eubacterium hallii DSM 3353]
gi|224956792|gb|EEG38001.1| hypothetical protein EUBHAL_00123 [Eubacterium hallii DSM 3353]
Length = 342
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP IA P+ R S+RLMV++ I+ + D+ +L+ D +V
Sbjct: 2 MKTSDFNFDLPQELIAQDPLEDRSSSRLMVLNKESG---EIAHRIFHDITEYLHPGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K + G + F
Sbjct: 59 INDTKVIPARLIGTK----EDTGAHIEILLLKRKENDVWETLVKPGKKCRPGARVVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++D G L+ F GI E + +G +PLPPYI K Y
Sbjct: 112 -GNGELKAEIVDVLEDGNRLVHFEYEGI-FEEVLDRLGQMPLPPYITHKLQD----KNRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+ + VTLHVG GTF PVKVE+ +H M
Sbjct: 166 QTVYAKYEGSAAAPTAGLHFTKELLKQIEDMGVNIARVTLHVGLGTFRPVKVENVLEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N K GGRI++VGTTS R LE+ E+GII+P G T IFI PG
Sbjct: 226 HSEYYNVTETAAKMINDTKKNGGRIIAVGTTSTRTLESVADENGIIHPGCGNTEIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 286 YKFKAIDCLITNFHLPESTLLMLVSALAGKEHIMAAYKEAVKERYRFFSFGDAMFI 341
>gi|225378183|ref|ZP_03755404.1| hypothetical protein ROSEINA2194_03843 [Roseburia inulinivorans DSM
16841]
gi|225209989|gb|EEG92343.1| hypothetical protein ROSEINA2194_03843 [Roseburia inulinivorans DSM
16841]
Length = 345
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 148/359 (41%), Positives = 198/359 (55%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RLMV+ + D+ +L D +V
Sbjct: 1 MDVKDFYYDLPQELIAQDPLEDRSSSRLMVLDKITG---EVEHRHFKDITEYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ E +I L R + W +P K K G + F
Sbjct: 58 INNTKVIPARLYGVK----EGTEAKIEILLLKRKENDIWETLVKPGKKCKIGTKIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+D G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGILTGEVVDIVEEGNRLIQFHYEGI-FEEILDRLGQMPLPPYITHQLQD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+++ VTLHVG GTF PVK D H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTPELLQQVRDMGVEIAEVTLHVGLGTFRPVKETDVLKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A +N K G R+++VGTTS R LE+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYKIEQSEADKINKAKKEGHRVIAVGTTSTRTLESAADENGFLTEKSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD + +
Sbjct: 285 YQFKVIDALITNFHLPESTLVMLVSALAGREHVLAAYETAVEEKYRFFSFGDAMFIVDR 343
>gi|126700420|ref|YP_001089317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile 630]
gi|123363078|sp|Q183N9|QUEA_CLOD6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115251857|emb|CAJ69692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Clostridium difficile]
Length = 341
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 198/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTRDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYIT----ARLDEKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGKNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|210622017|ref|ZP_03292960.1| hypothetical protein CLOHIR_00906 [Clostridium hiranonis DSM 13275]
gi|210154462|gb|EEA85468.1| hypothetical protein CLOHIR_00906 [Clostridium hiranonis DSM 13275]
Length = 350
Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F+FDLP IA P+ R ++RLMV+ I + D+ +L D +V
Sbjct: 10 LKTSDFNFDLPQELIAQTPIEDRSASRLMVLDKETG---EIEHKIFRDIKEYLKPGDCLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + +I L R + ++W +P K K G F
Sbjct: 67 LNDTRVIPARLIGEKV----DTGGKIEFLLLKRNTDDTWESLVKPGKRAKIGTKFSF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+ + G ++ F GI E + +G +PLPPYI K + Y
Sbjct: 120 -GGGKLIGEVVGMADEGARIIKFHYDGI-FEEILDELGNMPLPPYITEK----LEEKERY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL + +G+ + FVTLHVG GTF PVKV+D +H M
Sbjct: 174 QTVYSKHNGSAAAPTAGLHFTNELLEEIKEMGVDIAFVTLHVGLGTFRPVKVDDVLNHEM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G R++ VGTTS R +E+A EDG + SG+TNIFI PG
Sbjct: 234 HSEFYMVTQEAADKINKAKENGNRVICVGTTSCRTIESAAEEDGHMTAKSGWTNIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG E Y AI YRF+S+GD +
Sbjct: 294 YKFKVLDNLITNFHLPESTLIMLVSALCGREHVLNAYNEAIKERYRFFSFGDAMFI 349
>gi|323702061|ref|ZP_08113729.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfotomaculum nigrificans DSM 574]
gi|323532943|gb|EGB22814.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfotomaculum nigrificans DSM 574]
Length = 341
Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 206/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++D+ LP IA P+ RD +RLMVVH + D+ +L D +V
Sbjct: 1 MRLSDYDYQLPEELIAQEPLVNRDQSRLMVVHKDNQN---FEHKHFKDIINYLQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A++ G R +I L +++ N W +P K + GDIL F
Sbjct: 58 LNDTKVIPARIFGTRIA----TGAKIEVLLLRQLTANRWETLVKPGKKARVGDILDF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ +++ ++D + G ++ FS + + +GT+PLPPYI + Y
Sbjct: 111 -GQGQMQGKILDHTDVGGRIIEFSFR-EPFVQVLERIGTMPLPPYIKKPLADQ----QRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL+ + S G+ V LHVG GTF PV+VED H M
Sbjct: 165 QTVYARQEGSAAAPTAGLHFTPELLAEIRSRGVITVNVLLHVGLGTFRPVQVEDITQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N+ + RGGRI++VGTTS+R LET+ + G + SG T+IFI PG
Sbjct: 225 HEEYYEVTPEAAEKINTARERGGRIIAVGTTSVRCLETSANQAGQVLAGSGLTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ V+ L++NFHLPKSTLLMLVSA G E+ YQ A+ YRF+S+GD L+
Sbjct: 285 YRFKVVEGLITNFHLPKSTLLMLVSALAGREKILAAYQEAVRQRYRFFSFGDAMLII 341
>gi|188589166|ref|YP_001920353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E3 str. Alaska E43]
gi|251778245|ref|ZP_04821165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|238689663|sp|B2V339|QUEA_CLOBA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188499447|gb|ACD52583.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E3 str. Alaska E43]
gi|243082560|gb|EES48450.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 341
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 153/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ IS D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKETG---EISHKNFYDIIDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L RV + W A+P K + G F
Sbjct: 58 LNNTRVMPARLIGEK----EGTGGKIEFLLLKRVDKDRWECLAKPGKSARVGRRFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A V++ G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGKLKAEVVEVKENGNRIVEFYYEGI-FEEVLDSLGEMPLPPYIHERLED----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ GI + +VTLHVG GTF PVKVE +DH M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTEELLHKIKEKGINIAYVTLHVGLGTFRPVKVETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N K RG R++SVGTTS R LET EDG + SG+TNIFI PG
Sbjct: 225 HSEYYHLSKEDAEVINETKKRGNRVISVGTTSTRTLETIADEDGNVKETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKVVDRLITNFHLPESTLIMLVSTLAGKEHVMNAYEEAVKERYRFFSFGDAMFI 340
>gi|167761168|ref|ZP_02433295.1| hypothetical protein CLOSCI_03573 [Clostridium scindens ATCC 35704]
gi|167660834|gb|EDS04964.1| hypothetical protein CLOSCI_03573 [Clostridium scindens ATCC 35704]
Length = 343
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P+ R S+RL+V+ +S H+ ++ +L+ D +V
Sbjct: 1 MKRQDFYYELPEELIAQDPLEDRSSSRLLVLDKESGA---VSHHVFKEITDYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + E +I L R N W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKVG----TEAKIEILLLKRKENNIWETLVKPGKKAKIGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+D + G L+ F+ GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGLLVGEVVDIVDEGNRLIQFTYEGI-FEEILDKLGQMPLPPYITHQLED----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GS AAPTAGLHFT LL + GI + +TLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYATHTGSAAAPTAGLHFTPELLEEIERKGIDIARITLHVGLGTFRPVKVDEITEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K G R++ VGTTS R +E+A E G + SG+T IFI PG
Sbjct: 225 HSEFFQIDEEAAMKINRAKDSGKRVICVGTTSCRTIESAADETGHLKACSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YQFKILDCLITNFHLPESTLIMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMLI 340
>gi|239827856|ref|YP_002950480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
sp. WCH70]
gi|259551452|sp|C5D5E6|QUEA_GEOSW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|239808149|gb|ACS25214.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. WCH70]
Length = 342
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 208/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L+ D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIRHETFRNILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G + F
Sbjct: 58 LNDTRVMPARLYGEK----ENTGANIEVLLLKQLEGDRWETLVKPAKRVKVGTEITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT +D G +L FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKATCVDTLEHGGRILEFSYQGI-FYEVLEQLGEMPLPPYIKEKLDD----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAREVGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVSVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN V+ +GGRI++VGTTS R LET A+ +G SG+T+IFI P
Sbjct: 225 HAEFYQMTEETARLLNEVRQQGGRIIAVGTTSTRTLETIASKHNGAFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSA G E + Y A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILRAYNAAVKERYRFFSFGDAMLII 342
>gi|182418567|ref|ZP_02949847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum 5521]
gi|237667777|ref|ZP_04527761.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182377570|gb|EDT75121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum 5521]
gi|237656125|gb|EEP53681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 341
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ I + D+ +LN+ D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKKTG---EIEHKVFHDIVDYLNAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L RV + W A+P K + G F
Sbjct: 58 LNNTRVMPARLIGEK----EETGGKIEFLLLKRVEKDRWECLAKPGKSARVGRKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V++ G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGKLKAEVVEVKENGNRIVEFHYEGI-FEEVLDSLGEMPLPPYIHERLED----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ GI V ++TLHVG GTF PVKVE+ ++H M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTNQLLEQIKEKGINVVYLTLHVGLGTFRPVKVENLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A +N K GGR++SVGTTS R LET E+G++ SG+TNIFI PG
Sbjct: 225 HSEFYMLSKESADIINETKRNGGRVISVGTTSTRTLETIGDENGLVKEQSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKVVDNLITNFHLPESTLIMLVSTLAGKEHVMNAYKTAVEEKYRFFSFGDAMFI 340
>gi|289578214|ref|YP_003476841.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter italicus Ab9]
gi|289527927|gb|ADD02279.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter italicus Ab9]
Length = 341
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ I + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPKELIAQEPLEDRSSSRLMVLNKKTG---EIEHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R +I L R+S N W +P + K G F
Sbjct: 58 LNDTKVIPARLIGRR----EDSGGKIEFVLIKRISSNEWETLVKPGRRAKIGSRFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V+D G ++ F G+ E + +G +P+PPYI +K ++ Y
Sbjct: 111 -GTGELIAEVLDTTEAGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKK----LKNKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E+ ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTKELLEKIKQMGVKTVFITLHVGLGTFRPVKEEEIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A +N + GGRI++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAANEINETRKSGGRIIAVGTTSTRTLETVADENGYVKEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI H YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGRENIMRAYQVAIEHKYRFFSFGDAMLII 341
>gi|240146016|ref|ZP_04744617.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseburia
intestinalis L1-82]
gi|257201829|gb|EEV00114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseburia
intestinalis L1-82]
gi|291536123|emb|CBL09235.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Roseburia
intestinalis M50/1]
Length = 345
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 200/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RLMV+ N ++ + D+ +L D +V
Sbjct: 1 MDVKDFYYDLPQELIAQDPLEDRSSSRLMVLDKNTG---EVTHRVFKDITDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ E +I L R + W +P K K G + F
Sbjct: 58 INNTKVIPARLYGVK----EGTEAKIEILLLKRKENDIWETLVKPGKKCKVGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGLLTGEVIDIVEEGNRLIQFHYDGI-FEEILDQLGQMPLPPYITHQLQD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+++ VTLHVG GTF PVK D H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTPELLKKVKEMGVEIAEVTLHVGLGTFRPVKETDVLKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A +N K G R+++VGTTS R LE A+ E+G + SG+T IFI PG
Sbjct: 225 HSEFYRIEQSEADKINHAKETGHRVIAVGTTSTRTLEAASDENGFLRETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKVIDSLITNFHLPESTLVMLVSALAGREHVLNAYEIAVQEKYRFFSFGDAMLIT 341
>gi|297544495|ref|YP_003676797.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842270|gb|ADH60786.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 341
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ I + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPKELIAQEPLEDRSSSRLMVLNKKTG---EIEHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R +I L R+S N W +P + K G F
Sbjct: 58 LNDTKVIPARLIGRR----EDSGGKIEFVLIKRISSNEWETLVKPGRRAKIGSRFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V+D G ++ F G+ E + +G +P+PPYI +K ++ Y
Sbjct: 111 -GTGELIAEVLDATEAGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKK----LKNKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E+ ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTKELLEKIKQMGVKTVFITLHVGLGTFRPVKEEEIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A +N + GGRI++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAANEINETRKSGGRIIAVGTTSTRTLETVADENGYVKEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI H YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGRENIMRAYQVAIEHKYRFFSFGDAMLII 341
>gi|303240766|ref|ZP_07327279.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acetivibrio
cellulolyticus CD2]
gi|302591654|gb|EFL61389.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acetivibrio
cellulolyticus CD2]
Length = 341
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EF +DLP IA P+ R +RLMVV I + D+ +LN+ D +V
Sbjct: 1 MRVSEFFYDLPEELIAQEPLQDRKQSRLMVVDRKTG---EIEHRIFKDIIEYLNTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + +I L + W V +P + K G F
Sbjct: 58 LNDTRVIPARLLGEK----EDTGGKIEFVLLKNTGGDIWEVILKPGRRAKPGSRFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +ID G L+ F G+ E+ + VG +PLPPYI +K Y
Sbjct: 111 -GNGELKAEIIDVVEEGNRLVRFEYEGV-FEQILDRVGIMPLPPYITKKLED----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT+ LL ++ GI++ +VTLHVG GTF PVKVE+ +H M
Sbjct: 165 QTVYSKHKGSAAAPTAGLHFTTELLEKIKEKGIEIAYVTLHVGLGTFRPVKVENILEHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +N+ + GG+I++VGTTS R++ET E G + P SG+T+IFI PG
Sbjct: 225 HSEYYNLKEEDCNKINNTRKNGGKIIAVGTTSCRVIETIGDEFGALKPQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLP+STLLMLVSA G + K Y A++ YRF+S+GD +
Sbjct: 285 YNFKVVDKLITNFHLPESTLLMLVSALAGRDTIMKAYNEAVNEKYRFFSFGDAMFI 340
>gi|158320752|ref|YP_001513259.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus oremlandii OhILAs]
gi|158140951|gb|ABW19263.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus oremlandii OhILAs]
Length = 341
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 155/356 (43%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+DLP IA P+ RD +RLMV+ I+ D+ FLN D +V
Sbjct: 1 METKDFDYDLPEELIAQVPLEHRDQSRLMVLDKETGD---IAHRHFYDIIDFLNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + +I L R+ ++W +P K K G F
Sbjct: 58 LNDTRVLPARLIGEKEGS----GGKIEFLLLKRIELDTWEALVKPGKKAKVGSRFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL VI G ++ F G+ E + +G +PLPPYI K Y
Sbjct: 111 -GDGRLCTEVIGIGEEGSRIIKFQYDGV-FEDILDQLGQMPLPPYITEKLED----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K QGS AAPTAGLHFTS LL +L G+K ++TLHVG GTF PVKVE ++H M
Sbjct: 165 QTVYSKNQGSAAAPTAGLHFTSELLKKLEEKGVKTAYITLHVGLGTFRPVKVEKIEEHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K+ G RI++VGTTS R LE+ T+DGII P SG+T+IFI PG
Sbjct: 225 HSEFYTIDDKNANIINEAKANGKRIIAVGTTSCRTLESVATKDGIIEPKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLP+STL+MLVS G E T Y+ A+ YRF+S+GD +
Sbjct: 285 YDFKIVDNLITNFHLPESTLIMLVSTLAGKEATLNAYKIAVKEGYRFFSFGDAMFI 340
>gi|229824967|ref|ZP_04451036.1| hypothetical protein GCWU000182_00316 [Abiotrophia defectiva ATCC
49176]
gi|229790970|gb|EEP27084.1| hypothetical protein GCWU000182_00316 [Abiotrophia defectiva ATCC
49176]
Length = 341
Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 206/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R ++RL+V+ + + SD+ +LN D +V
Sbjct: 1 MKTSDFFYELPEELIAQDPLEDRTASRLLVLDRKT---DKLEHKIFSDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + ++ L R + W +P K ++ G + F
Sbjct: 58 INNTRVIPARLIGEK----EGTGGKVEILLLKRRENDIWESLVKPGKKLRPGARVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A +++ G L+ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKAEILEIAEEGNRLVKFYYEGI-FEEILDSLGEMPLPPYITHKLED----KEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT+ LL ++ G+++ +TLHVG GTF PVKVED ++H M
Sbjct: 165 QTVYAKFDGSAAAPTAGLHFTNELLEKIRHKGVRIASITLHVGLGTFRPVKVEDVNNHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E ++ A +N K GGR++ VGTTS R +E+ E+G+++ +G T+IFI PG
Sbjct: 225 HTEWYEVNKEAADIINETKKNGGRVICVGTTSCRTIESVADENGLMSAKTGETDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STL+MLVSAF G E Y+ A+ YRF+S+GD +L
Sbjct: 285 YKFKVMDGLITNFHLPESTLVMLVSAFAGKERVLSAYETAVKEIYRFFSFGDAMILI 341
>gi|302385235|ref|YP_003821057.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
saccharolyticum WM1]
gi|302195863|gb|ADL03434.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
saccharolyticum WM1]
Length = 349
Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++F+F+LP IA P+ R ++RL+V+ + I D+ ++L D +V
Sbjct: 1 MNVRDFNFNLPQELIAQDPLEDRSASRLLVLDKHTG---EIQHRHFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ E +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----EGTEAKIEILLLKRRENDIWETLVKPGKKAKMGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TVID G L+ FS GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGLLKGTVIDVVEEGNRLIQFSYEGI-FEEILDRLGQMPLPPYITHQLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + +G+ + VTLHVG GTF PVKV++ + H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLKEIEDMGVSIAHVTLHVGLGTFRPVKVDEIEAHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGRIV VGTTS R +E+A+ DG++ SG+T IFI PG
Sbjct: 225 HSEFYMVEEEEARKVNDAKKNGGRIVCVGTTSCRTVESASGSDGMLRAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G + Y+ AI YRF+S+GD L
Sbjct: 285 YRFKLLDCLITNFHLPESTLVMLVSALAGRDHVLHAYEEAIKERYRFFSFGDAMFLT 341
>gi|229543705|ref|ZP_04432765.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
coagulans 36D1]
gi|229328125|gb|EEN93800.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
coagulans 36D1]
Length = 342
Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FD++LP IA P+ R +RLMV+ I + ++ +L D +V
Sbjct: 1 MKLDLFDYELPEELIAQTPLKNRSDSRLMVLDKKTG---EIEHSVFKNITQYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L G++ +I L ++ + W +P+K +K G ++ F
Sbjct: 58 LNNTKVLPARLFGIKD----ETGAKIEVLLLKQLEGDRWETLVKPAKRVKTGTVVRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A ++ + G ++ F GI ++ +G +PLPPYI + Y
Sbjct: 111 -GDGQLSAVCAEELDHGGRVMDFQYEGI-FYEVLNELGKMPLPPYIKEQLEDQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + ++G+K+ ++TLHVG GTF PV E+ ++H M
Sbjct: 165 QTVYAKEPGSAAAPTAGLHFTEALLKEIEAMGVKIVYITLHVGLGTFRPVNEENIENHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + A+ + VK GGR+VSVGTTS R LET A+ DG I SG+T+IFI P
Sbjct: 225 HAEFYQVSEEAARTITEVKENGGRVVSVGTTSTRTLETVASAHDGKIVASSGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++A+D L++NFHLPKSTL+M+VSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 GYQYKAIDALITNFHLPKSTLIMMVSALAGRENILHAYETAVKEKYRFFSFGDAMLI 341
>gi|303231808|ref|ZP_07318524.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-049-V-Sch6]
gi|302513515|gb|EFL55541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-049-V-Sch6]
Length = 341
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 156/356 (43%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA PV PRD++RL+ + + DL L + D +V
Sbjct: 1 MKVTDFDYDLPEELIAQHPVEPRDTSRLLTLDKITGEYTHKAH--FYDLLDELQAGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQREGS----GGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL+ATV+DK + G ++ F+ G+ + I +G +PLPPYI K Y
Sbjct: 112 --DDRLKATVLDKTDFGGRIVEFTCDGV-FDDIIQEIGEMPLPPYIHEKLED----KDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV VE +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSVETIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N KS+G RI++VGTTS+R LE+A+T+DGI++ SG+T IFI PG
Sbjct: 225 HSEFYSVSEDTARRINEAKSKGKRIIAVGTTSIRTLESASTDDGILHATSGWTKIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMVDALVTNFHLPQSTLLMLISALAGREHCLAAYKAAVKERYRFFSFGDAMFI 340
>gi|291539017|emb|CBL12128.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Roseburia
intestinalis XB6B4]
Length = 345
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 200/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RLMV+ N ++ + D+ +L D +V
Sbjct: 1 MDVKDFYYDLPQELIAQDPLKDRSSSRLMVLDKNTG---EVTHRVFKDITDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ E +I L R + W +P K K G + F
Sbjct: 58 INNTKVIPARLYGVK----EGTEAKIEILLLKRKENDIWETLVKPGKKCKVGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGLLTGEVIDIVEEGNRLIQFHYDGI-FEEILDQLGQMPLPPYITHQLQD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+++ VTLHVG GTF PVK D H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTPELLKKVKEMGVEIAEVTLHVGLGTFRPVKETDVLKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A +N K G R+++VGTTS R LE A+ E+G + SG+T IFI PG
Sbjct: 225 HSEFYRIEQSEADKINHAKETGHRVIAVGTTSTRTLEAASDENGFLRETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKVIDSLITNFHLPESTLVMLVSALAGREHVLNAYEIAVQEKYRFFSFGDAMLIT 341
>gi|303230199|ref|ZP_07316967.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-134-V-Col7a]
gi|302515125|gb|EFL57099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-134-V-Col7a]
Length = 341
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 156/356 (43%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA PV PRD++RL+ + + DL L + D +V
Sbjct: 1 MKVTDFDYDLPEELIAQHPVEPRDTSRLLTLDKITGEYTHKAH--FYDLLDELQAGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQREGS----GGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL+ATV+DK + G ++ F+ G+ + I +G +PLPPYI K Y
Sbjct: 112 --DERLKATVLDKTDFGGRIVEFTCDGV-FDDIIQEIGEMPLPPYIHEKLED----KDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV VE +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSVETIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N KS+G RI++VGTTS+R LE+A+T+DGI++ SG+T IFI PG
Sbjct: 225 HSEFYSVSEDTARRINEAKSKGKRIIAVGTTSIRTLESASTDDGILHATSGWTKIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMVDALVTNFHLPQSTLLMLISALAGREHCLAAYKAAVKERYRFFSFGDAMFI 340
>gi|294501379|ref|YP_003565079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium QM B1551]
gi|295706726|ref|YP_003599801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium DSM 319]
gi|294351316|gb|ADE71645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium QM B1551]
gi|294804385|gb|ADF41451.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium DSM 319]
Length = 342
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ RD++RLMV++ + H+ DL ++ D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLEQRDASRLMVLNKETGS---VKHHMFHDLLDYVQEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNDTRVLPARLFGTK----EDTGANIEVLLLKQTQGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + + G LL F+ GI + +G +PLPPYI + Y
Sbjct: 111 -GDGRLTAVCKETSDQGGRLLEFNYEGI-FYEVLEQLGEMPLPPYIKERLDDQ----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ QGS AAPTAGLHFT +L +L G+ + F+TLHVG GTF PV V+D ++H M
Sbjct: 165 QTVFAREQGSAAAPTAGLHFTEEMLEQLKEKGVHIAFLTLHVGLGTFRPVSVDDLEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + TA LNSV+ +GGRI+SVGTTS R LET TE +G SG+TNIFI P
Sbjct: 225 HSEFYQVSEGTAALLNSVREKGGRIISVGTTSTRTLETIATEHNGKFVASSGWTNIFIFP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKSTL+MLVSA G E Y+ A++ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSTLIMLVSALAGRENVISAYEQAVAEKYRFFSFGDAMLIL 342
>gi|325295633|ref|YP_004282147.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325066081|gb|ADY74088.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 343
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA PV PRDS+RLMV++ N I + D+ +L + D +V
Sbjct: 1 MKVSDFDYKLPKELIAKFPVEPRDSSRLMVLNKNTG---KIEHRIFKDIVEYLKAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G ++ L + N+W V A+P++ +KKG + F
Sbjct: 58 INDTKVIPARLFGK-----LDTGGKVEILLVRQPGLNTWEVMAKPARKLKKGRKISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVF-SISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
LEA V + G+ ++ F S + +I +G IPLPPYI R+ +
Sbjct: 110 --DEELEAVVKEYSGEGKRIIEFVIKSNKDFMEKIEEIGHIPLPPYIEREEKPED--REK 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ +G+VAAPTAGLHFT+ LL L S GI + +TLHVG GTF PVKVE+ +DH
Sbjct: 166 YQTVFARKEGAVAAPTAGLHFTTELLENLKSKGIIIKNITLHVGPGTFKPVKVENVEDHQ 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
M E ++ TA +N K G R+++VGTT R LE+A E G + TN+FI P
Sbjct: 226 MDYETYYVPEDTAIEINRAKEEGRRVIAVGTTVTRTLESAADESGKVKQGEDSTNLFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ +D L++NFHLP+STLLMLVSAF G E Y+ A+ YRFYSYGD +F
Sbjct: 286 GYKFKVIDALITNFHLPRSTLLMLVSAFAGKERILNAYKEAVRKGYRFYSYGDAMFIF 343
>gi|118444595|ref|YP_877907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
novyi NT]
gi|118135051|gb|ABK62095.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
novyi NT]
Length = 344
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 153/355 (43%), Positives = 203/355 (57%), Gaps = 16/355 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
VK+FDF LP IA P+ RD +RLMVV I + D+ +LN D +V
Sbjct: 5 KVKDFDFYLPQELIAQHPMEKRDESRLMVVDRKSG---QIEHKIFRDILGYLNEGDCLVL 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L G + +I L R+ ++W +P K K G F
Sbjct: 62 NNTRVLPARLIGEK----ENTGGKIEFLLLRRIEGDTWETLVKPGKKAKIGARFVF---- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V G ++ F GI E + +G +PLPPYI + YQ
Sbjct: 114 GSGELKAEVKSMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITERLED----KERYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K +GS AAPTAGLHFT LL + GIK+ FVTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKEKGSAAAPTAGLHFTEELLKEIKEKGIKIAFVTLHVGLGTFRPVKVENIEEHHMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA +N+ K GG+I++VGTTS R LET EDG + SG+T+IF+ PGY
Sbjct: 229 SEYYTMSKETADIINNTKENGGKIIAVGTTSCRTLETIGDEDGKVRETSGWTDIFMYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ + YRF+S+GD L
Sbjct: 289 KFKVVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVKNKYRFFSFGDAMFL 343
>gi|20807638|ref|NP_622809.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Thermoanaerobacter tengcongensis MB4]
gi|22096013|sp|Q8RAN0|QUEA_THETN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|20516181|gb|AAM24413.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Thermoanaerobacter tengcongensis MB4]
Length = 341
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 206/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF FDLP IA P+ R S+RLM++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFDLPEELIAQEPLEDRASSRLMILDRRTG---EIKHDIFKNITKYLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R ++ L R S N W V +P K K G + F
Sbjct: 58 LNDTKVIPARLIGQR----EDSGGKVELLLLRRTSMNEWEVLVKPGKRAKVGKRVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A +ID G + F G+ E + +G +P+PPYI +K Y
Sbjct: 111 -GNGELVAEIIDTTEAGGRIARFYYDGV-FEEVLDRLGEMPVPPYIKKKLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + ++G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLDEIRNMGVKTVFITLHVGLGTFRPVKEEIIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+A+N + GGRI++VGTTS R LET E G I+P SG+T+IFI PG
Sbjct: 225 HEEFYIVTEEAAKAINEARKNGGRIIAVGTTSTRTLETVADESGYIHPKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ AI + YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKVAIENKYRFFSFGDAMLII 341
>gi|187778350|ref|ZP_02994823.1| hypothetical protein CLOSPO_01942 [Clostridium sporogenes ATCC
15579]
gi|187771975|gb|EDU35777.1| hypothetical protein CLOSPO_01942 [Clostridium sporogenes ATCC
15579]
Length = 341
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I D + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKKTG---EIEDKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGSK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLDD----KEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +HIM
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLEKIKGKGVKLAFLTLHVGLGTFRPVKVEDIQEHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N+ + +GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKKTAKIINTTREKGGRVIAVGTTSCRTLETIGDIEGKVKEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNMAVEKEYRFFSFGDAMFI 340
>gi|315650365|ref|ZP_07903437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saburreum DSM 3986]
gi|315487476|gb|EFU77786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saburreum DSM 3986]
Length = 345
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RL+V+ + I+ D+ +L+ D +V
Sbjct: 5 MDVKDFRYDLPQELIAQDPLEDRSSSRLLVLDKDTG---EITHKHFYDIIDYLDEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ + L R S W +P K + G ++ F
Sbjct: 62 LNETKVIPARLMGVK----KDTGAVVEILLLKRKSKTVWECLVKPGKKCRVGAVIEF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV D G ++ F GI E + +GT+PLPPYI Y
Sbjct: 115 -GEGLLTGTVSDIVEEGNRIIEFEFDGI-FEEILDKLGTMPLPPYITHTLKD----RNRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKV D H M
Sbjct: 169 QTVYAKNDGSAAAPTAGLHFTKELLKDIEDKGVKLAKVTLHVGLGTFRPVKVSDVRQHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +NS ++ G R++ VGTTS R +E+A+ + G + SG+T+IFI PG
Sbjct: 229 HSEFFQVSKEAADIINSTRANGKRVICVGTTSTRTVESASDDKGYLKETSGWTDIFIYPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E+ Y+ A+ YRF+S+GD +
Sbjct: 289 YKFKVLDALITNFHLPESTLVMLVSALAGREKVLHAYEEAVKEKYRFFSFGDAMFI 344
>gi|255526661|ref|ZP_05393566.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
gi|296187166|ref|ZP_06855563.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
gi|255509641|gb|EET85976.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
gi|296048201|gb|EFG87638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
Length = 341
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA P+ RD ARLM++ N I + D+ +L D +V
Sbjct: 1 MKVTDFDFYLPEELIAQCPLEKRDEARLMLLDKNTG---EIEHKIFKDIIDYLEPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + +I L R+ + W +P K + G F
Sbjct: 58 LNDTRVLPARLIGSK----ENTGGKIEFLLLKRIDKDKWETLVKPGKRAQVGTRFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGELKAEVVSVEEDGNRIVKFEYEGI-FEEVLDKLGQMPLPPYIKEKLED----KEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K QGS AAPTAGLHFT LL ++ G+ + F+TLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYSKEQGSAAAPTAGLHFTEELLKKIEEKGVNIAFLTLHVGLGTFRPVKVENIQDHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N + G I++VGTTS R LET ++G + SG+T+IFI PG
Sbjct: 225 HSEYYTMSKETADIINKTRKNGKSIIAVGTTSCRTLETIGNDEGEVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STL+MLVSA G E Y A+ YRF+S+GD +
Sbjct: 285 YKYKMVDKLITNFHLPESTLIMLVSALAGRENVMNAYDTAVKERYRFFSFGDAMFI 340
>gi|307244210|ref|ZP_07526325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus stomatis DSM 17678]
gi|306492360|gb|EFM64398.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus stomatis DSM 17678]
Length = 341
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 195/356 (54%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLMVV N I + D+ +L D +V
Sbjct: 1 MKTSDFKYDLPEELIAQVPIEDRSSSRLMVVDKNTG---QIEHRVFKDIIDYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + ++ L R ++W +P K K G F
Sbjct: 58 LNDTRVIPARLIGEKVGS----GGKMEFLLLKRNEDDTWETLVKPGKRAKLGARFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V+D G L+ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GGGKLFADVVDILEDGSRLVKFDYDGI-FEEILDELGNMPLPPYITEKLED----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ + G+K FVTLHVG GTF PVKV+D H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTDQLLDQIRAKGVKTAFVTLHVGLGTFRPVKVDDVGQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N + + R++ VGTTS R +E+A+ DG + SG+T+IFI PG
Sbjct: 225 HSEFYMVTQEAADMINEARVKSKRVICVGTTSCRTIESASKPDGRLEAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ D L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 285 YKFKVCDNLITNFHLPESTLIMLVSALSSKENILNAYKSAVEERYRFFSFGDAMFL 340
>gi|260587878|ref|ZP_05853791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Blautia
hansenii DSM 20583]
gi|260542143|gb|EEX22712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Blautia
hansenii DSM 20583]
Length = 355
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM + I + +LN D +V
Sbjct: 15 MRTADFYYDLPEELIAQDPLLDRSSSRLMHLDKQTG---EICHTDFKHIIDYLNPEDCLV 71
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + I L R N W +P K K G + F
Sbjct: 72 INDTRVIPARLYGSKVG----TDAGIEILLLKRRENNIWETLVKPGKKAKPGTKISF--- 124
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI K Y
Sbjct: 125 -GDGLLIGEVLDIVEEGNRLIQFQYEGI-FEEILDKLGEMPLPPYITHKLQD----KERY 178
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKV+D + H M
Sbjct: 179 QTVYAKNEGSAAAPTAGLHFTKELLKEIEEKGVKIAHVTLHVGLGTFRPVKVDDVESHHM 238
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K++GGR++SVGTTS R LE+AT E+GI+ SG+T+IFI PG
Sbjct: 239 HSEFYVVEEEQAKIINETKAKGGRVISVGTTSCRTLESATDENGILQAKSGWTDIFIYPG 298
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSA G E+ Y+ A+ YRF+S+GD ++
Sbjct: 299 YQFKMIDALITNFHLPESTLLMLVSALAGKEKIMNAYEEAVKERYRFFSFGDAMII 354
>gi|187933823|ref|YP_001885223.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B str. Eklund 17B]
gi|238691636|sp|B2TMZ3|QUEA_CLOBB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187721976|gb|ACD23197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B str. Eklund 17B]
Length = 341
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ IS D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKETG---EISHKNFYDIIDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L RV + W A+P K + G F
Sbjct: 58 LNNTRVMPARLIGEK----EGTGGKIEFLLLKRVEKDRWECLAKPGKSARVGRRFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A V++ + G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GDGKLKAEVVEVKDNGNRIVEFYYEGI-FEEVLDSLGEMPLPPYIHERLED----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ GI + +VTLHVG GTF PVKV+ +DH M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTEELLHKIKDRGINIAYVTLHVGLGTFRPVKVDTIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N+ K RG +++SVGTTS R LET EDG + +G+TNIFI PG
Sbjct: 225 HSEYYHLSKEDAEVINATKKRGNKVISVGTTSTRTLETIADEDGNVKETNGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKVVDRLITNFHLPESTLIMLVSTLAGKEHVMNAYEEAVKEKYRFFSFGDAMFI 340
>gi|331083879|ref|ZP_08332988.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 6_1_63FAA]
gi|330403304|gb|EGG82864.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 6_1_63FAA]
Length = 341
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM + I + +LN D +V
Sbjct: 1 MRTADFYYDLPEELIAQDPLLDRSSSRLMHLDKQTG---EICHTDFKHIIDYLNPEDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + I L R N W +P K K G + F
Sbjct: 58 INDTRVIPARLYGSKVG----TDAGIEILLLKRRENNIWETLVKPGKKAKPGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGLLIGEVLDIVEEGNRLIQFQYEGI-FEEILDKLGEMPLPPYITHKLQD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLKEIEEKGVKIAHVTLHVGLGTFRPVKVDDVESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K++GGR++SVGTTS R LE+AT E+GI+ SG+T+IFI PG
Sbjct: 225 HSEFYVVEEEQAKIINETKAKGGRVISVGTTSCRTLESATDENGILQAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSA G E+ Y+ A+ YRF+S+GD ++
Sbjct: 285 YQFKMIDALITNFHLPESTLLMLVSALAGKEKIMNAYEEAVKERYRFFSFGDAMII 340
>gi|220932067|ref|YP_002508975.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halothermothrix orenii H 168]
gi|254764280|sp|B8CXG1|QUEA_HALOH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219993377|gb|ACL69980.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halothermothrix orenii H 168]
Length = 341
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 206/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD++LP IA +P+ RD +RLMV+H I + + ++ FL D +V
Sbjct: 1 MKVEEFDYELPEELIAQKPLPNRDDSRLMVLHRKTG---EIEETVFKNIIKFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L ++ W V RP + +KKG+ + F
Sbjct: 58 LNDTKVIPARLFGEKI----PSGTRIEVLLLKSITEGLWEVLVRPGRRMKKGNRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V D + G ++ F G + ++ I +G +PLPPYI RK Y
Sbjct: 111 -GDGKLVGIVKDYTDFGGRIMQFEYDG-DFDKVIEELGEMPLPPYITRKVED----KGRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHFT LL ++ GI + ++TLHVG GTF PV+ E+ +DH M
Sbjct: 165 QTVYARKKGSVAAPTAGLHFTDRLLKKIKEQGIGIIYLTLHVGLGTFRPVRAENVEDHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + K +G ++++VGTT R LE+A E + G+T+IFI PG
Sbjct: 225 HSEYFEVSTDVVNRIKETKEKGKKVIAVGTTVTRALESAAVEKRHLKAMRGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLPKSTLLMLVSAF G + Y+ AI + YRF+S+GD L+
Sbjct: 285 YNFKVIDGLITNFHLPKSTLLMLVSAFAGKDMVMSAYKLAIKNKYRFFSFGDAMLIL 341
>gi|153810635|ref|ZP_01963303.1| hypothetical protein RUMOBE_01019 [Ruminococcus obeum ATCC 29174]
gi|149833031|gb|EDM88113.1| hypothetical protein RUMOBE_01019 [Ruminococcus obeum ATCC 29174]
Length = 341
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 200/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RL+ + +D+ +L+ D +V
Sbjct: 1 MKTSDFYYDLPKELIAQDPLEDRSSSRLLHLSMQDGS---FEHRHFTDILDYLHKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYGHK----EETGAVIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGILKGEIIDVVDEGNRLIQFHYDGI-FEEILDQLGEMPLPPYITHKLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+K+ VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNDGSAAAPTAGLHFTRELLKQVEDMGVKIAHVTLHVGLGTFRPVKVDDVEQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+AT E+GI+ SG+T IFI PG
Sbjct: 225 HSEFYMVEEDQAKLINDTKKNGGRVISVGTTSCRTLESATDENGILQAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YHFKMIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMLII 341
>gi|291519050|emb|CBK74271.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Butyrivibrio fibrisolvens 16/4]
Length = 345
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 203/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+VK+FD++LP IA P+ R ++RLMV+ + I+ D+ +L D +V
Sbjct: 1 MLVKDFDYELPEELIAQDPLEKRSNSRLMVLDKHTG---EIAHRHFYDIKEYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R ++ L R+S N W +P K + G + F
Sbjct: 58 INNTRVIPARLYGARVGS----GGKVEILLLKRISDNQWECLVKPGKKARPGMEISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ++D + G ++ F+ GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGLLIGKIVDIVDEGNRIIEFTYEGI-FEEILDKLGEMPLPPYITHKLQD----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + ++G+++ VTLHVG GTF PVK ++ DH M
Sbjct: 165 QTVYAKFDGSAAAPTAGLHFTPELLEEVKAMGVRIAEVTLHVGLGTFRPVKEDEVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +N K+ GGR++SVGTTS R LE+A ++P SG+T IFI PG
Sbjct: 225 HSEYYEITQEACDIINETKANGGRVISVGTTSTRTLESAAEAGKPLSPKSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 YEFKVIDCLITNFHLPQSTLIMLVSALAGREHVLAAYKKAVEEKYRFFSFGDAMMIT 341
>gi|331269240|ref|YP_004395732.1| S-adenosylmethionine--tRNA-ribosyltransferase- isomerase
[Clostridium botulinum BKT015925]
gi|329125790|gb|AEB75735.1| S-adenosylmethionine--tRNA-ribosyltransferase- isomerase
[Clostridium botulinum BKT015925]
Length = 341
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV + D+ + N D +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDESRLMVVDRKSGHR---EHKIFKDILGYFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDKWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GSGELKAEVKGMGQDGSRIIEFEYEGI-FEEVLDRLGQMPLPPYITEKLDD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+K+ FVTLHVG GTF PVK ED ++H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTKELLKEIENKGVKIAFVTLHVGLGTFRPVKAEDIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K GG+I++VGTTS R LET E+G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETADIINETKENGGKIIAVGTTSCRTLETIGDENGKVRETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ YRF+S+GD L
Sbjct: 285 YKFKIVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVDEKYRFFSFGDAMFL 340
>gi|302389934|ref|YP_003825755.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermosediminibacter oceani DSM 16646]
gi|302200562|gb|ADL08132.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermosediminibacter oceani DSM 16646]
Length = 341
Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 213/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F ++LP IA P+ RD++RLMVV + + + ++ +L D +V
Sbjct: 1 MDVKDFYYELPEELIAQEPLEKRDTSRLMVVKRDTR---IFEHRIFENITEYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ +I L R+ N+W V +P + + G + F
Sbjct: 58 LNDTRVMPARLLGVK----EDTGGKIEFVLLKRIKENTWEVLVKPGRRARIGSVFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V+D + G ++ F GI E+ + +G +P+PPYI + + +D Y
Sbjct: 111 -GDGRLRAKVLDFTDAGGRIVEFYYDGI-FEQVLDELGQMPVPPYIKK----ELKDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PVKV + ++H M
Sbjct: 165 QTVYARNPGSAAAPTAGLHFTEELLRKIEQNGVKICYITLHVGLGTFRPVKVRNIEEHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + + A+ +N K G R+++VGTTS R LET ++G + SG+T++FI PG
Sbjct: 225 HHEYFEVGSHAAETINRAKESGKRVIAVGTTSTRTLETVADQNGFVKSGSGWTDLFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ VD +++NFHLP+STLLMLVSAF G + Y+ AI YRFYS+GD L+
Sbjct: 285 YRFKVVDGMVTNFHLPESTLLMLVSAFAGRDLIMAAYREAIDKRYRFYSFGDAMLII 341
>gi|238019734|ref|ZP_04600160.1| hypothetical protein VEIDISOL_01609 [Veillonella dispar ATCC 17748]
gi|237863775|gb|EEP65065.1| hypothetical protein VEIDISOL_01609 [Veillonella dispar ATCC 17748]
Length = 341
Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLDKVTGEVAHKEH--FYDLLDELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQRQGS----GGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL TVIDK G ++ F+ G+ + I +G +PLPPYI K Y
Sbjct: 112 --DDRLSGTVIDKTEFGGRIIEFTCDGV-FDDVIQEIGEMPLPPYIHEKLED----KDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKRNGRRIIAVGTTSVRTLESATNDDGVLQGISGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|15895551|ref|NP_348900.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
acetobutylicum ATCC 824]
gi|21263900|sp|Q97GT2|QUEA_CLOAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|15025288|gb|AAK80240.1|AE007729_7 Queuine synthetase, queA [Clostridium acetobutylicum ATCC 824]
gi|325509700|gb|ADZ21336.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
acetobutylicum EA 2018]
Length = 341
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP IA P RD RLMVV + + D+ +LN D +V
Sbjct: 1 MQLEDFDYYLPEELIAQHPCDKRDECRLMVVDKKSG---EVEHRIFKDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + ++ L R+ ++W +P K K G F
Sbjct: 58 LNDTRVLPARLIGNKVG----TGGKMEFLLLKRIDKDTWETLVKPGKRAKVGAEFEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A + G ++ F GI E + +G +PLPPYI + + +Y
Sbjct: 111 -GGGVLKAVIKSIGEDGNRVVEFKYEGI-FEEILDKLGQMPLPPYITE----ELENKEEY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ + GIK F+TLHVG GTF PVKVE+ + H M
Sbjct: 165 QTVYSKNNGSAAAPTAGLHFTNELLDKIRAKGIKTVFLTLHVGLGTFRPVKVENIESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A +N + GGRI+SVGTTS R LET E G + SG+T+I+I PG
Sbjct: 225 HSEYYMLSKESADTINETRKNGGRIISVGTTSTRTLETIADEKGNVREQSGWTDIYIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLPKSTL+MLVSA + Y+ A+ + YRF+S+GD +
Sbjct: 285 YKYKIVDGLITNFHLPKSTLVMLVSALSSRDNILNAYKIAVENRYRFFSFGDAMFI 340
>gi|290769980|gb|ADD61747.1| putative protein [uncultured organism]
Length = 343
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 205/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R S+RLMV+ I + D+ +L D +V
Sbjct: 1 MDLHDFYYDLPEELIAQDPLSDRSSSRLMVLDKETG---EIEHKIFRDIVDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G + I L R+ ++W V +P K K G + F
Sbjct: 58 VNDTKVIPARLIGTK----ADTGATIEVLLLKRLEDRQDTWEVLVKPGKKAKVGAKISF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G+ +L +ID G L+ F+ GI E + +G +PLPPYI K
Sbjct: 113 ---GEGKLIGEIIDIVEEGNRLIQFTYDGI-FEEILDELGQMPLPPYITHKLED----KN 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +GS AAPTAGLHFT+ LL ++ ++G+ + VTLHVG GTF PVKVE+ DH
Sbjct: 165 RYQTVYAKHEGSAAAPTAGLHFTTELLEKIKAMGVNIARVTLHVGLGTFRPVKVENILDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + A +N+ + GGR+++VGTTS R LE+ EDG I SG+T IFI
Sbjct: 225 HMHSEFYVVTQEAADMINNTRKNGGRVIAVGTTSTRTLESVALEDGTIPAKSGWTEIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 PGYKFKAIDCLITNFHLPESTLVMLVSALAGREHVLHAYEVAVQEKYRFFSFGDAMFI 342
>gi|300856544|ref|YP_003781528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
ljungdahlii DSM 13528]
gi|300436659|gb|ADK16426.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
ljungdahlii DSM 13528]
Length = 344
Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +FDF LP IA P+ RD ARLMV+ I + D+ +LN D +V
Sbjct: 4 LKVTDFDFYLPEELIAQHPLMQRDEARLMVLDKKTGD---IEHKVFKDILDYLNPGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + ++ L R + ++W +P K K G F
Sbjct: 61 LNDTRVLPARLIGSKEGS----GGKMEILLLKRNADDTWETLVKPGKRAKVGSRFDF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G ++ F GI E + +G +PLPPYI K Y
Sbjct: 114 -GDGELKAEIVSVKEDGNRIVKFEYEGI-FEEVLDRLGQMPLPPYIKEKLED----KEMY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ GIK+ F+TLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKEEGSAAAPTAGLHFTKELLKKIEDKGIKLAFLTLHVGLGTFRPVKVENIEEHNM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N + +GG I++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 228 HSEYYCMTKETADMINETREKGGSIIAVGTTSCRTLETIGDENGKVREQSGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STL+MLVSA CG E+ Y A+ YRF+S+GD L
Sbjct: 288 YKYKVVDKLITNFHLPQSTLIMLVSALCGREKILNAYNCAVKEKYRFFSFGDAMFL 343
>gi|238917266|ref|YP_002930783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
eligens ATCC 27750]
gi|238872626|gb|ACR72336.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
eligens ATCC 27750]
Length = 343
Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 205/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R S+RLMV+ I + D+ +L D +V
Sbjct: 1 MDLHDFYYDLPEELIAQDPLSDRSSSRLMVLDKETG---EIEHKIFRDIVDYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G + I L R+ ++W V +P K K G + F
Sbjct: 58 VNDTKVIPARLIGTK----ADTGATIEVLLLKRLEDRQDTWEVLVKPGKKAKVGAKISF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G+ +L +ID G L+ F+ GI E + +G +PLPPYI K
Sbjct: 113 ---GEGKLIGEIIDIVEEGNRLIQFTYDGI-FEEILDELGQMPLPPYITHKLED----KN 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +GS AAPTAGLHFT+ LL ++ ++G+ + VTLHVG GTF PVKVE+ DH
Sbjct: 165 RYQTVYAKHEGSAAAPTAGLHFTTELLEKIKAMGVNIARVTLHVGLGTFRPVKVENILDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + A +N+ + GGR+++VGTTS R LE+ EDG I SG+T IFI
Sbjct: 225 HMHSEFYVVTQEAADMINNTRKNGGRVIAVGTTSTRTLESVALEDGTIPAKSGWTEIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 PGYKFKAIDCLITNFHLPESTLVMLVSALAGREHVLHAYEVAVQEKYRFFSFGDAMFI 342
>gi|188586408|ref|YP_001917953.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|229892797|sp|B2A5L1|QUEA_NATTJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|179351095|gb|ACB85365.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 343
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 207/356 (58%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EF+++LP IA +P+ R +RLMVV N S + + LP ++ D V
Sbjct: 1 MKLEEFNYELPEELIAQKPLANRSKSRLMVVSINSSD---VQHNHFEKLPQYVKDGDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + + E LH + W V +P K K G++ F
Sbjct: 58 INNSRVIPARLFGNKKQTGGKLE---MVLLHPLEGKDEWEVLVKPGKRAKPGNVFEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ LEA ++D G + F G ++ + +G +PLPPYI + D Y
Sbjct: 112 -GQETLEAEILDITPEGSRRVKFYYQG-NFQQVLDQLGQMPLPPYIKE----ELEDPERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT ++S + G +V +TLHVG GTF PV+ + ++H M
Sbjct: 166 QTVYAKESGSVAAPTAGLHFTPEIISDIKDQGGEVAELTLHVGLGTFRPVETPNIEEHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA+ +N K RG R+++VGTT +R LET T+DG++ P G+T+IFI PG
Sbjct: 226 HAEYYQLPEETAKKINQAKQRGNRVIAVGTTVVRTLETVKTDDGLVQPGKGWTDIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD +++NFHLPKSTLLMLVSAF G + YQ AI YRF+S+GD +
Sbjct: 286 YEFKVVDAMLTNFHLPKSTLLMLVSAFAGKDLIMSAYQAAIEERYRFFSFGDAMFI 341
>gi|150390105|ref|YP_001320154.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus metalliredigens QYMF]
gi|167016401|sp|A6TQM7|QUEA_ALKMQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149949967|gb|ABR48495.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus metalliredigens QYMF]
Length = 341
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 154/356 (43%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFDFDLP IA P+ RD +RLMV+ N I D+ +LN D +V
Sbjct: 1 MKTNEFDFDLPDRLIAQTPLEKRDHSRLMVLDKNKQ---EIVHKHFYDITDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L GV+ ++ L R+ N+W V +P K K G F
Sbjct: 58 INNTRVLPARLFGVK----ENTGGKMEFLLLKRIDLNTWEVLVKPGKKAKIGSRFEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V+ + G ++ F G+ E + +G +PLPPYI + D Y
Sbjct: 111 -GEGILKAEVLSMADEGARIVRFEYEGV-FEELLDQLGKMPLPPYITE----ELADRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LLS + GI V +TLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYSKHEGSSAAPTAGLHFTPELLSEIKKKGINVVSITLHVGLGTFRPVKVDSLENHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I AQ +N K G R+ +VGTTS R LE+A+TE G I G+TNIFI PG
Sbjct: 225 HAEYYEITEEAAQVINDTKKAGNRVFAVGTTSCRTLESASTEKGKIEANKGWTNIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E+T + Y+ A+ YRF+S+GD L+
Sbjct: 285 YQFKILDGLITNFHLPESTLIMLVSALLGKEKTLQAYKVAVDEQYRFFSFGDAMLI 340
>gi|269797657|ref|YP_003311557.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Veillonella parvula DSM 2008]
gi|269094286|gb|ACZ24277.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Veillonella parvula DSM 2008]
Length = 341
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA P+ PRD+ARL+ + DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPIEPRDTARLLTLDKVSGKVSHKEH--FYDLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGHRQGS----GGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL VIDK G ++ F+ +G+ + I +G +PLPPYI K Y
Sbjct: 112 --DDRLRGIVIDKTEFGGRIIEFTCNGV-FDDVIQEIGEMPLPPYIHEKLED----KDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQETADRINAAKRNGRRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVKERYRFFSFGDAMFI 340
>gi|56421123|ref|YP_148441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
kaustophilus HTA426]
gi|81557813|sp|Q5KWR3|QUEA_GEOKA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56380965|dbj|BAD76873.1| S-adenosylmethionine tRNA ribosyltransferase [Geobacillus
kaustophilus HTA426]
Length = 342
Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++LN D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKRTGA---IRHETFRNIISYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K +K G L F
Sbjct: 58 LNDTRVMPARLYGEK----EETGGTVEVLLLKQLDGDRWETLVKPGKRVKPGTKLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +LEA +D G +L FS G+ ++ +G +PLPPYI K Y
Sbjct: 111 -GEGKLEAVCLDTLEHGGRVLEFSYDGL-FYEVLAELGEMPLPPYIKEKLDD----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV+V+D + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGVHIVFITLHVGLGTFRPVQVDDVEKHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN V+ +GGRI++VGTTS R LET A +G SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAETLNRVREQGGRIIAVGTTSTRTLETIAGKHNGRFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+ +D L++NFHLPKSTL+MLVSA G E YQ A+ YRF+S+GD L+
Sbjct: 285 GYEFKGIDGLVTNFHLPKSTLIMLVSALAGRENILHAYQVAVKERYRFFSFGDAMLII 342
>gi|326204477|ref|ZP_08194334.1| LOW QUALITY PROTEIN:
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Clostridium papyrosolvens DSM 2782]
gi|325985270|gb|EGD46109.1| LOW QUALITY PROTEIN:
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Clostridium papyrosolvens DSM 2782]
Length = 340
Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 202/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P+ RD +RLMV++ I L +D+ +L+ D +V
Sbjct: 1 MDLHDFDYYLPEELIAQHPMEKRDMSRLMVLNKETG---EIEHKLFTDIVNYLDEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L RV + W V RP K K G F
Sbjct: 58 LNNTRVIPARLLGEK----EGTGGKIEFVLLKRVEGDKWEVILRPGKKAKPGSRFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ + G L+ F G+ E + VG +PLPPYI K + Y
Sbjct: 111 -GNGELKAEILEVLDEGNRLVRFIYDGV-FEEILDRVGIMPLPPYITEK----LENPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK+ GS AAPTAGLHFT LL L G+K+ +V LHVG GTF PVKV+D H M
Sbjct: 165 QTVYAKVNGSAAAPTAGLHFTKELLDSLTRKGVKIAYVMLHVGLGTFRPVKVDDITQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T +N + +G ++V+VGTTS R+LET + G I P G+T+IFI PG
Sbjct: 225 HSEYYSISQETCDIINDTRQKGKKVVAVGTTSCRVLET-VGKSGRIAPCDGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD L++NFHLP+STL+MLVS+ G + Y A+ YRF+S+GD +
Sbjct: 284 YRFKVVDRLITNFHLPESTLIMLVSSLAGRDNVMHAYNVAVEEKYRFFSFGDAMFI 339
>gi|138896156|ref|YP_001126609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
thermodenitrificans NG80-2]
gi|166216723|sp|A4IRB0|QUEA_GEOTN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134267669|gb|ABO67864.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Geobacillus
thermodenitrificans NG80-2]
Length = 342
Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++L+ D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKQTGA---IRHETFRNIISYLHPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K ++ G L F
Sbjct: 58 LNDTRVMPARLYGEK----AETGGMVEVLLLKQLDGDRWETLVKPGKRVRPGTKLVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A +D G +L FS G+ + ++ +G +PLPPYI K + Y
Sbjct: 111 -GGGKLQAVCLDTLEHGGRVLEFSYEGL-FYQVLAELGEMPLPPYIKEK----LDNPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + GI + F+TLHVG GTF PV+V+D + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGIHIAFITLHVGLGTFRPVQVDDIEKHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V++ GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAILNRVRANGGRIIAVGTTSTRTLETIANRHDGRFAAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSAF G E Y+ A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSAFAGREHILHAYEVAVKEQYRFFSFGDAMLII 342
>gi|302391490|ref|YP_003827310.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acetohalobium arabaticum DSM 5501]
gi|302203567|gb|ADL12245.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acetohalobium arabaticum DSM 5501]
Length = 341
Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 203/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA +P PRD ++LMV+ I + + + + D +V
Sbjct: 1 MKVSDFDYDLPEELIAQQPAEPRDESQLMVLDRKTG---EIKERIFKKIIDLIEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + + ++ L ++W V RP + +K G + F
Sbjct: 58 LNNTEVIPARLYGKK----EKTGGKVEFLLLTETELDTWEVLVRPGRKVKIGTRVVFGDN 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L A V D+ + G ++ F G+ + +G +PLPPYI + + + Y
Sbjct: 114 D----LIAEVKDRTDFGGRVVEFEYKGV-FAEVLDKLGEMPLPPYITK----ELEERNQY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+ AAPTAGLHFT +L +L G+ + +TLHVG GTF PV+ ++ ++H M
Sbjct: 165 QTVYAQKKGAAAAPTAGLHFTEEVLEQLEEKGVNIAAITLHVGLGTFRPVRADEVEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A +N K GGRI++VGTT R LET ++G + G+T+IFI PG
Sbjct: 225 HAEYYEVTDKAADTINQTKESGGRIIAVGTTVTRTLETVGNKEGYVEADKGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+M+V+AF G ++ YQ AI YRFYS+GD L+
Sbjct: 285 YEFKVIDGLLTNFHLPESTLIMMVTAFAGYDKVMAAYQEAIDKEYRFYSFGDAMLII 341
>gi|196250110|ref|ZP_03148804.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Geobacillus sp. G11MC16]
gi|196210294|gb|EDY05059.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Geobacillus sp. G11MC16]
Length = 342
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++L+ D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKQTGA---IRHETFRNIISYLHPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K ++ G L F
Sbjct: 58 LNDTRVMPARLYGEK----AETGGMVEVLLLKQLDGDRWETLVKPGKRVRPGTKLVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A +D G +L FS G+ + ++ +G +PLPPYI K + Y
Sbjct: 111 -GGGKLQAVCLDTLEHGGRVLEFSYEGL-FYQVLAELGEMPLPPYIKEK----LDNPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + GI + F+TLHVG GTF PV+V+D + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGIHIAFITLHVGLGTFRPVQVDDVEKHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V++ GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAILNRVRANGGRIIAVGTTSTRTLETIANRHDGRFAAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSAF G E Y+ A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSAFAGREHILHAYEVAVKEQYRFFSFGDAMLII 342
>gi|253578958|ref|ZP_04856229.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849901|gb|EES77860.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 341
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 198/357 (55%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM + I +D+ ++ D +V
Sbjct: 1 MKTSDFYYDLPQELIAQDPLEDRSSSRLMHLSLKDGS---IEHRHFTDVLDYMEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYGHK----EETGALIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GNGILKGKIIDVVDEGNRLIQFHYEGI-FEEILDQLGEMPLPPYITHKLKD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLEKVKEKGVNIAHVTLHVGLGTFRPVKVDDVESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K G R+++VGTTS R LE+AT EDGI+ SG+T IFI PG
Sbjct: 225 HSEFYIVEEDQAKLINDTKKAGKRVIAVGTTSCRTLESATGEDGILKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +L
Sbjct: 285 YHFKMIDALITNFHLPESTLVMLVSALAGKENIMHAYEVAVQEKYRFFSFGDAMILI 341
>gi|220927982|ref|YP_002504891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
cellulolyticum H10]
gi|219998310|gb|ACL74911.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
cellulolyticum H10]
Length = 340
Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 202/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P+ RD +RLMV+ I L DL +L+ D +V
Sbjct: 1 MNLHDFDYYLPEELIAQHPLEKRDMSRLMVLDKQTG---EIEHKLFKDLFNYLDEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L RV ++W V RP K K G F
Sbjct: 58 LNNTRVIPARLLGEK----EGTGGKIEFVLLKRVEGDNWEVILRPGKKAKPGSKFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ + G L+ F G+ E + VG +PLPPYI K + Y
Sbjct: 111 -GNGELKAEILEVLDEGNRLVRFIYDGV-FEEILDRVGVMPLPPYITEK----LDNPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK+ GS AAPTAGLHFT LL L+ G+K+ +V LHVG GTF PVKV+D H M
Sbjct: 165 QTVYAKVNGSAAAPTAGLHFTKELLDSLVHKGVKIAYVMLHVGLGTFRPVKVDDITQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T +N + +G ++V+VGTTS R+LET ++G I P G+T+IFI PG
Sbjct: 225 HSEYYSISQETCDIINVTREKGKKVVAVGTTSCRVLET-IGKNGKIAPCDGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLP+STL+MLVS+ G + Y A+ YRF+S+GD +
Sbjct: 284 YEFKVVDRLITNFHLPESTLIMLVSSLAGRDNVLHAYSVAVEEKYRFFSFGDAMFI 339
>gi|134299522|ref|YP_001113018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfotomaculum reducens MI-1]
gi|172044286|sp|A4J540|QUEA_DESRM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134052222|gb|ABO50193.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfotomaculum reducens MI-1]
Length = 341
Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 211/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P+ RD +RLM+VH ++ DL +L D +V
Sbjct: 1 MQLSDFDFELPEELIAQEPIKQRDQSRLMIVHRDIDRT---EHKTFKDLLQYLQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KV+ A++ G + +I L ++S N W +P K K G+IL F
Sbjct: 58 MNDSKVLPARIYGEKVS----TGAKIEVLLLRQISANQWETLVKPGKRAKIGEILDF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +++ ++D + G ++ FS + + +G++PLPPYI + Y
Sbjct: 111 -GSGKMKGKIVDHTDVGGRVIEFSCQ-EPFLQVLEQIGSMPLPPYIKKPLTD----KQRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL + + G+ + V LHVG GTF PV+VED H M
Sbjct: 165 QTVYARQEGSAAAPTAGLHFTRELLEEIRNRGVSIVTVLLHVGLGTFRPVQVEDVTSHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A+ +N K RGGR+++VGTTS+R LET++ E G + P SGFT+IFI PG
Sbjct: 225 HEEYYEITPQAAEEINQAKLRGGRVIAVGTTSVRCLETSSNEAGQVLPGSGFTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ ++ L++NFHLPKS+LLML+SA G E+ K YQ A++ YRF+S+GD L+
Sbjct: 285 YQFKVIEGLVTNFHLPKSSLLMLISALAGREKILKAYQQAVTEQYRFFSFGDAMLII 341
>gi|212638559|ref|YP_002315079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anoxybacillus flavithermus WK1]
gi|212560039|gb|ACJ33094.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Anoxybacillus flavithermus WK1]
Length = 345
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 205/358 (57%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ RD++RLMV+ + + ++L D +V
Sbjct: 3 MKIDLFDFYLPEELIAQTPLPNRDASRLMVLDKQTGEVT--HESTFRSILSYLKEGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G I+ F
Sbjct: 61 LNDTRVLPARLYGEK----EETGAHIEVLLLKQLDGDQWETLVKPAKRVKVGTIISF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + + G +L FS GI + +G +PLPPYI D Y
Sbjct: 114 -GDGRLRAECVAELEHGGRILSFSYDGI-FLEVLESLGEMPLPPYIK----AQLHDRERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 168 QTVYAREAGSAAAPTAGLHFTEQLLEDVRKKGVHLAFITLHVGLGTFRPVNVENIEEHDM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TAQ LN VK++GGRI++VGTTS R LET A+ DG SG+T+IFI P
Sbjct: 228 HAEFYQMSEQTAQLLNDVKAQGGRIIAVGTTSTRTLETIASRHDGTFVAESGWTDIFIYP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY FRA+D +++NFHLPKSTL+MLVSA G E + Y+ A+ YRF+S+GD L+
Sbjct: 288 GYTFRAIDGIITNFHLPKSTLIMLVSALAGREHVLRAYEEAVKERYRFFSFGDAMLII 345
>gi|294793309|ref|ZP_06758454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 6_1_27]
gi|294455740|gb|EFG24105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 6_1_27]
Length = 341
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLDKVSGEVKHKGH--FYDLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGHRQGS----GGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK + G ++ F+ +G+ + I +G +PLPPYI K Y
Sbjct: 112 --DDRLSGVIIDKTDFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEKLED----KDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|229829378|ref|ZP_04455447.1| hypothetical protein GCWU000342_01467 [Shuttleworthia satelles DSM
14600]
gi|229792541|gb|EEP28655.1| hypothetical protein GCWU000342_01467 [Shuttleworthia satelles DSM
14600]
Length = 345
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 201/359 (55%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD++LP IA P+ RD +RL+V+ P + D+ +L + D +V
Sbjct: 1 MDVKDFDYELPEELIAQDPLLKRDQSRLLVLDPETGA---MEHRHFYDIRDYLRAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + ++ L + ++W +P + ++G + F
Sbjct: 58 INNTRVIPARLLGAK----EETGAKVEVLLLINHGGDNWETLVKPGRKCREGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V G ++ FS GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGLLVGQVTKVLEDGNRMIHFSYQGI-WEEVLDRLGQMPLPPYIHHQLAD----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ VTLHVG GTF PVK + +DH M
Sbjct: 165 QTVYAKHDGSAAAPTAGLHFTPELLEEIRKSGVEIAEVTLHVGLGTFRPVKADRVEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N ++ GGRI++VGTTS R LE+ DG I SG+T IFI PG
Sbjct: 225 HSEYYVVGQEAADTINRARANGGRIIAVGTTSTRTLESVAEADGTIPVKSGWTKIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y+F+A+D L++NFHLP+STLLMLVSA G + K Y+ A+ YRF+S+GD + +
Sbjct: 285 YQFKAIDGLITNFHLPQSTLLMLVSALAGRDHILKAYREAVEEKYRFFSFGDAMFIKPR 343
>gi|310643556|ref|YP_003948314.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Paenibacillus polymyxa SC2]
gi|309248506|gb|ADO58073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (Queuosine
biosynthesis protein) [Paenibacillus polymyxa SC2]
Length = 342
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 212/359 (59%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DF+LP + IA P+ R ++RL+ ++ N + H SD+ +L D +V
Sbjct: 1 MNVNDYDFELPETLIAQTPLLERTASRLLTLNKNNG---EVGHHTFSDIVQYLQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + L ++ + W +P K +KKG ++ F +
Sbjct: 58 LNDTRVIPARLFGIK----QDTGAKAEVLLLKQLEGDRWEALVKPGKKLKKGAVIVFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A + ++ + G +L FS GI + + +G +PLPPYI + Y
Sbjct: 114 -----LKAVIEEEGDMGGRVLSFSYDGI-FQEILDRLGQMPLPPYIKEQLDD----RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL R+ G+ V F+TLHVG GTF P+ V+ ++H+M
Sbjct: 164 QTVYARHEGSAAAPTAGLHFTEELLDRIKEKGVTVAFITLHVGLGTFRPMSVDTIEEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN+ K+RGGR+V+VGTTS R LET + DG++ SG+T IFI
Sbjct: 224 HEEYYSLSQETADVLNATKARGGRVVAVGTTSCRTLETVGSNFVDGVLQASSGWTQIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FR VD +++NFHLPKSTL+MLVSA G + YQ AI YRF+S+GD ++
Sbjct: 284 PGYEFRVVDAMITNFHLPKSTLVMLVSALAGRKNIMHAYQEAIDQKYRFFSFGDAMFIY 342
>gi|225569103|ref|ZP_03778128.1| hypothetical protein CLOHYLEM_05183 [Clostridium hylemonae DSM
15053]
gi|225161902|gb|EEG74521.1| hypothetical protein CLOHYLEM_05183 [Clostridium hylemonae DSM
15053]
Length = 341
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 198/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P+ R S+RL+V+ ++S H+ D+ +L+ D +V
Sbjct: 1 MKRQDFYYELPEELIAQDPLEDRSSSRLLVLDKESG---LVSHHVFKDITDYLHRGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R + I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLVGSRIG----TDARIEVLLLKRKENDIWETLVKPGKKAKIGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L VID G L+ FS GI E + +G +PLPPYI + Y
Sbjct: 111 -GEGILTGEVIDVVEEGNRLIQFSYEGI-FEEILDRLGQMPLPPYITHQLED----KNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVK +D +H M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLEEIQKKGVDIARVTLHVGLGTFRPVKADDILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K GG+++ VGTTS R +E+A + G I SG+T+IFI PG
Sbjct: 225 HSEFFQIDEAAAMKINKAKDTGGKVICVGTTSCRTIESAADKTGHITAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YEFKLLDGLITNFHLPESTLIMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMYI 340
>gi|225181933|ref|ZP_03735367.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dethiobacter alkaliphilus AHT 1]
gi|225167373|gb|EEG76190.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dethiobacter alkaliphilus AHT 1]
Length = 342
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 205/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFD++LP IA P+ R+++RL+++H + SD+ + L + D +V
Sbjct: 1 MHLSEFDYELPEELIAQVPLTDREASRLLILHRKSGA---VEHGNFSDILSHLQAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + L R W +P + ++ G + F
Sbjct: 58 LNDTKVLPARLTGRKKGG----GAMAEVLLLTRKDKACWEALVKPGRRLRPGAEVEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A + ++ G L+ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GNGELTAVIKEELADGTRLVEFRYDGI-FEEVLDRLGEMPLPPYITEKLAD----RQRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ GI V ++TLHVG GTF PVK ED +H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTPRLLAEAQDRGINVVYLTLHVGLGTFRPVKTEDIREHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +AQ LNS + GGRIV+VGTTS R+LET +DG IN SG+T+IFI PG
Sbjct: 225 HSEYYNISPESAQILNSCRRAGGRIVAVGTTSCRVLETVAQDDGTINAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ V+ L++NFHLPKSTL+M++SAF G + Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKTVNALLTNFHLPKSTLIMMISAFAGRDNVLNAYREAVQERYRFFSFGDAMLII 341
>gi|294795131|ref|ZP_06760265.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 3_1_44]
gi|294453923|gb|EFG22298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 3_1_44]
Length = 341
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLDKVSGEVKHKGH--FYDLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGHRQGS----GGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK N G ++ F+ +G+ + I +G +PLPPYI K Y
Sbjct: 112 --DDRLSGVIIDKTNFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEKLED----KDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVPQDTANRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|261418396|ref|YP_003252078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
sp. Y412MC61]
gi|319767645|ref|YP_004133146.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y412MC52]
gi|261374853|gb|ACX77596.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y412MC61]
gi|317112511|gb|ADU95003.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y412MC52]
Length = 342
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 202/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++LN D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKRTGA---IRHETFRNIISYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K +K G L F
Sbjct: 58 LNDTRVMPARLYGEK----EETGGTVEVLLLKQLDGDRWETLVKPGKRVKPGTKLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +LEA +D G +L FS G+ ++ +G +PLPPYI K Y
Sbjct: 111 -GGGKLEAVCLDTLEHGGRVLEFSYDGL-FYEVLAELGEMPLPPYIKEKLDD----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV+V++ + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGVHIVFITLHVGLGTFRPVQVDEVEKHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN V+ +GGRI++VGTTS R LET A +G SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAETLNRVREQGGRIIAVGTTSTRTLETIAGKHNGRFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+ +D L++NFHLPKSTL+MLVSA G E YQ A+ YRF+S+GD L+
Sbjct: 285 GYEFKGIDGLVTNFHLPKSTLIMLVSALAGRENILHAYQVAVKERYRFFSFGDAMLII 342
>gi|146295225|ref|YP_001178996.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145408801|gb|ABP65805.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 345
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +P+ PRDS+RLMV+HP+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPEELIAQKPIEPRDSSRLMVIHPDGR----IDHRIFRDIIEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+S ++W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLSIDTWEVMTRPGKKARKGRRFVF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G RL+A V+ +V E + +G IPLPPYI K + YQ
Sbjct: 113 GDGRLKAEVLHVNQDEGTRIVRFEYEGVFEDILESLGEIPLPPYIKEK----LENVERYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+KI GS AAPTAGLHFT LLSR+ G++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKIPGSAAAPTAGLHFTEELLSRISKKGVQTLYVTLHVGLGTFKPVKVENIEEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I A+ +N K G R+++VGTTS R+LE+A E G++ G+T+IFI PGY
Sbjct: 229 EEYYEISEDVAERINEAKRLGKRVIAVGTTSCRVLESAAVEKGLVKAQKGWTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ +
Sbjct: 289 EFKILDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVEQRYRFFSFGDAMLILK 345
>gi|291544961|emb|CBL18070.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus sp. 18P13]
Length = 341
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 194/356 (54%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PR+ +RLMV+ +S +L L D +V
Sbjct: 1 MKKSDFYYDLPEELIAQTPIEPRNQSRLMVIDRETGA---VSHQHFYNLCDMLQEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++VI A+L G + I L + W + RP K K G F
Sbjct: 58 LNDSRVIPARLYGEKI----DNGTFIEFLLLEQKGDKLWELICRPGKKAKVGTRFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL V++ G L+ F+ G + VG +PLPPYI K Y
Sbjct: 111 -GGGRLIGEVVEVKEDGNRLVQFTCEG-NFFTALEDVGQMPLPPYIKAKLQD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT +L +L G+++ +VTLHVG GTF PVK +D H M
Sbjct: 165 QTVYSRELGSAAAPTAGLHFTKEMLQQLQDKGVRLAYVTLHVGLGTFRPVKEDDVLQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K+ GGR++ VGTTS R +E+ T G I G+T+IFI PG
Sbjct: 225 HSEHYAMSQETADLINQTKAAGGRVICVGTTSCRTVESIATFFGKIQACEGYTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSAF G + T + Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKVMDGLITNFHLPESTLIMLVSAFLGYDNTMRAYKTAVEEKYRFFSFGDACFI 340
>gi|320528956|ref|ZP_08030048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
artemidis F0399]
gi|320138586|gb|EFW30476.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
artemidis F0399]
Length = 346
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 149/360 (41%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP RIA P+ PRD++RLMV+ P I +L L D ++
Sbjct: 1 MDISDFDYDLPEERIAQTPLEPRDASRLMVLDP---AEQTIEHRHFYELDVLLQPGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R + ++ L ++ + W +P K + GD + F +
Sbjct: 58 FNDTRVIPARLIGARD----KTGAKVEVLLLRQIDRDRWEALVKPGKKARIGDRIRFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +I + G ++ F GI E + +G +PLPPYI K Y
Sbjct: 114 -----LSCGIISHTDFGGRIVKFIYQGI-FEEILDRLGEMPLPPYIREKLSD----ADRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL RL G+ FVTLHVG GTF PV+ + ++H+M
Sbjct: 164 QTIYSRERGSAAAPTAGLHFTEELLVRLKEKGVIFGFVTLHVGLGTFRPVQEQTIENHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TAQ + K+ G RIV+VGTTS+R LE+A E G I P SG+T+IFI PG
Sbjct: 224 HREYYAIPEETAQIIRRAKAEGRRIVAVGTTSIRTLESAAGETGEIRPTSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD L+ ++
Sbjct: 284 YRFKVVDAIITNFHLPKSTLIMLISAFAGRSFILNAYKQAVDEGYRFFSFGDAMLIQGRK 343
>gi|313623657|gb|EFR93813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua FSL J1-023]
Length = 342
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 219/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESG---EIKDQHFTDIISYLNKGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTQNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +KS GG++V+VGTTS+R LET A+ DG + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEESADRINKIKSAGGKVVAVGTTSIRTLETIASRHDGKLIAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYKFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGDAMFI 341
>gi|323706517|ref|ZP_08118076.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323534147|gb|EGB23939.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 341
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 215/357 (60%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF +DLP IA P+ RD +RLMV++ + I + ++ +L ND +V
Sbjct: 1 MNLHEFYYDLPEELIAQEPLQNRDESRLMVLNKDTG---EIKHDIFKNILTYLKPNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GVR +I L R+ + W + +P + K G F
Sbjct: 58 LNDTKVIPARLYGVR----EDTGGKIEFVLLKRLGIDEWEILVKPGRRAKIGSKFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ + G ++ FS G+ E + +G +P+PPYI +K Y
Sbjct: 111 -GNGELKALILSDTDAGGRIVRFSYEGV-FEEVLDKLGEMPIPPYIKKKLKD----KNMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLDKIREFGVKTVFITLHVGLGTFRPVKEEVIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A A+N+ + GGRI+SVGTTS R LET +DGII+ SG+T+IFI PG
Sbjct: 225 HSEFYIVNEDAADAINAARKAGGRIISVGTTSTRTLETVADDDGIIHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++A+D +++NFHLP+STL+M++SAF G E Y+ AI + YRFYS+GD L+
Sbjct: 285 YKYKAIDGIITNFHLPESTLIMMISAFAGKENVMNAYKTAIENKYRFYSFGDAMLII 341
>gi|315122778|ref|YP_004063267.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496180|gb|ADR52779.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 359
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 285/359 (79%), Positives = 321/359 (89%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
MMVKEFDF LP SRIALRPV PRDSARLMVV+PNLSC +ISD+ V DLP FLNSNDAIV
Sbjct: 1 MMVKEFDFHLPSSRIALRPVSPRDSARLMVVYPNLSCSQMISDYSVRDLPIFLNSNDAIV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI AQL G R N E ISCTLHMR+S NSWS Y RP K+I++GD ++FFSQ
Sbjct: 61 FNNTKVIAAQLRGRRLRRTNDSEHWISCTLHMRISSNSWSAYVRPGKIIRQGDTIYFFSQ 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQS+LEA VI+K +TGEILLVF +SG EL+RQI+L+GT+PLPPYIA+KRPID RDYVDY
Sbjct: 121 DGQSKLEANVIEKRDTGEILLVFPLSGTELDRQIALIGTMPLPPYIAKKRPIDERDYVDY 180
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTTYA IQGSVAAPTAGLHFTS+LLS+L+S+G+ VYF+TLHVGAGTFMPV+VEDTDDHIM
Sbjct: 181 QTTYASIQGSVAAPTAGLHFTSDLLSKLVSMGVAVYFITLHVGAGTFMPVRVEDTDDHIM 240
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEIGFIDA TAQ LN+VK RGGRIV+VGTTSLRLLETATTEDGII P SG+TNIFITPG
Sbjct: 241 HSEIGFIDAQTAQDLNAVKLRGGRIVAVGTTSLRLLETATTEDGIIMPLSGYTNIFITPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFRAVD+L+SNFHLPKSTLLMLVSAFCG+EETK MYQHAI+++YRFYSYGD SL+F+K
Sbjct: 301 YRFRAVDVLLSNFHLPKSTLLMLVSAFCGVEETKTMYQHAIANSYRFYSYGDASLIFKK 359
>gi|16800634|ref|NP_470902.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua Clip11262]
gi|21263888|sp|Q92BI3|QUEA_LISIN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|16414053|emb|CAC96797.1| lin1566 [Listeria innocua Clip11262]
gi|313618792|gb|EFR90688.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua FSL S4-378]
Length = 342
Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 218/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESG---EIKDQHFTDIISYLNKGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTQNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +KS GG++V+VGTTS+R LET A+ DG + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEESADRINKIKSAGGKVVAVGTTSIRTLETIASRHDGKLIAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYEFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGDAMFI 341
>gi|260887834|ref|ZP_05899097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|330838599|ref|YP_004413179.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|260862440|gb|EEX76940.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|329746363|gb|AEB99719.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
Length = 343
Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 151/360 (41%), Positives = 212/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++K+FD++LP RIA +P+ PR+++RLMV+ P I DL FL DA++
Sbjct: 1 MLLKDFDYELPEERIAQKPIEPRNASRLMVLDP---VAKTIEHRHFYDLGEFLAPGDALI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G R I L R+ +SW RP K + G ++ F +
Sbjct: 58 LNDTRVLPARLYGRR----EPTGAHIEVFLLRRLDKDSWETLVRPGKKAQVGQVIRFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V+ + G ++ F G+ E + +G PLPPYI + Y
Sbjct: 114 -----LCAEVMAHTDFGGRIVKFRYEGV-FEEILDRLGETPLPPYIHERLED----KERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT L+ L + G+ + FVTLHVG GTF PV VE ++H M
Sbjct: 164 QTVYCREEGSAAAPTAGLHFTREQLAELKAQGVHIGFVTLHVGLGTFRPVNVEKIEEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ + K+ GGR+++VGTTS+R LE+A G+I+ SG+T+IFI PG
Sbjct: 224 HSEYYQLPEETAELIRRTKAAGGRVIAVGTTSIRTLESAAEAQGVISAKSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ VD L++NFHLPKSTLLML+SAF G E Y+ A+ YRF+S+GD +KR
Sbjct: 284 YRFKIVDALVTNFHLPKSTLLMLISAFAGREFVLHAYEEAVREKYRFFSFGDAMF-LRKR 342
>gi|331003020|ref|ZP_08326532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae oral taxon 107 str. F0167]
gi|330413064|gb|EGG92439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae oral taxon 107 str. F0167]
Length = 341
Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VKEF +DLP IA P+ R S+RL+V+ IS D+ +LN D +V
Sbjct: 1 MDVKEFWYDLPQELIAQDPLEDRASSRLLVLDKKNG---EISHKHFYDIIDYLNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ N I L R + SW +P K K G + F
Sbjct: 58 LNETKVIPARLMGVK----NDTGAAIEILLLKRKTKTSWECLVKPGKKCKVGAKIDF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L T++D G + + E + +GT+PLPPYI Y
Sbjct: 111 -GEGLLTGTIMDIVEEGNRI-IEFEFEGIFEEILDKLGTMPLPPYITHALKD----RNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ GI++ VTLHVG GTF PVKV D ++H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLEKIEKKGIRLAKVTLHVGLGTFRPVKVNDINEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I + A +NS K G R+V VGTTS R +E+A E+G + SG+T+IFI PG
Sbjct: 225 HSEFFNISSEAADIINSTKKNGKRVVCVGTTSTRTIESAADENGYLEEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKVLDALITNFHLPESTLVMLVSALAGRENILHAYEEAVKEKYRFFSFGDAMLI 340
>gi|154498091|ref|ZP_02036469.1| hypothetical protein BACCAP_02072 [Bacteroides capillosus ATCC
29799]
gi|150273081|gb|EDN00238.1| hypothetical protein BACCAP_02072 [Bacteroides capillosus ATCC
29799]
Length = 343
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ RD +RLMV++ S H +LP FL D +V
Sbjct: 3 LKTSDFYYDLPQELIAQTPLDRRDGSRLMVLNKETGET---SHHHFYELPNFLRPGDCLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G R + L + W RP + +K G L F
Sbjct: 60 LNDSRVLPARLLGHR----EPTGGAVEVLLLIDRGNKVWECLVRPGRKVKPGTKLSF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V+++ G L+ F GI + +G +PLPPYI + D Y
Sbjct: 113 -GDGLLTADVLEEVEGGNRLIEFHYEGI-FLEILERLGKMPLPPYIKE----ELNDPERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT LL+++ ++G+++ +VTLHVG GTF PVK E+ DH M
Sbjct: 167 QTVYSREVGSAAAPTAGLHFTKELLAQIEAMGVRLAYVTLHVGLGTFRPVKEENITDHEM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I TA +N K+ GGR++ VGTTS R +E+ EDG + +G+T+I+I PG
Sbjct: 227 HAEYCMISQKTADIINETKANGGRVICVGTTSCRTIESWAAEDGTLKESAGWTSIYIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+A+D L++NFHLP+STL+MLVSA G E Y A YRF+S+GD +
Sbjct: 287 YRFKALDCLITNFHLPESTLVMLVSALAGRENILNAYAEAAREKYRFFSFGDAMFI 342
>gi|149183133|ref|ZP_01861583.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. SG-1]
gi|148849165|gb|EDL63365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. SG-1]
Length = 342
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R +RLM + + D+ FL D +V
Sbjct: 1 MKVEDFDFHLPEELIAQTPLEKRSESRLMAIDRESGN---LQHKKFKDITDFLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ +I L + + W +P+K +K G + F
Sbjct: 58 LNDTRVLPARLFGVK----EETGAKIEVLLLKQEEGDKWETLIKPAKRVKVGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L A + + G +L F GI + +G +PLPPYI+ K Y
Sbjct: 111 -GEGKLTALCTGEKDQGGRILEFHYEGI-FYEVLDELGEMPLPPYISEKLDDQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +GS AAPTAGLHFT LL + S G+ V F+TLHVG GTF PV V+ ++H M
Sbjct: 165 QTVFARERGSAAAPTAGLHFTEELLDEIRSRGVHVAFITLHVGLGTFRPVSVDSIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE I TA+ LN VK GGRI++VGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HSEFYQITEGTARLLNEVKESGGRIITVGTTSTRTLETIASKHDGKFVEESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD+ L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSAFTSRDIILNAYKTAVEEKYRFFSFGDSMLIL 342
>gi|289422359|ref|ZP_06424205.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus anaerobius 653-L]
gi|289157194|gb|EFD05813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus anaerobius 653-L]
Length = 340
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 143/355 (40%), Positives = 196/355 (55%), Gaps = 17/355 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F + LP IA P+ R S+RLMV+ I + D+ +L D +V
Sbjct: 1 MKTSDFKYYLPEELIAQVPIKDRSSSRLMVLDKATG---EIEHRIFKDIIDYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + R E L ++ W +P K K G + F
Sbjct: 58 LNDTRVIPARLIGEKESSGGRVE-----FLLLKRDGELWETLVKPGKRAKIGSRISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V+D G ++ F GI E + +G +PLPPYI K Y
Sbjct: 110 -GGGKLVAEVVDIVEDGSRMVKFIYDGI-FEEVLDELGNMPLPPYITAKLDD----KERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + S G+ + FVTLHVG GTF PVKV+D + H M
Sbjct: 164 QTVYSKHKGSAAAPTAGLHFTECLLEEIKSKGVDLAFVTLHVGLGTFRPVKVDDVESHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N K G RI+ VGTTS R +E+ +EDG ++ +G+T+IFI PG
Sbjct: 224 HSEFYVVSEDAAEKINRAKENGKRIICVGTTSCRTIESVASEDGKMHAKTGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
Y+F+ VD L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD
Sbjct: 284 YKFKVVDNLITNFHLPESTLVMLVSALSKKEYVLSAYEEAVKEKYRFFSFGDAMF 338
>gi|304317012|ref|YP_003852157.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778514|gb|ADL69073.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 341
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 215/357 (60%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF +DLP IA P+ RD +RLM+++ I + ++ ++LN ND +V
Sbjct: 1 MNLHEFYYDLPEELIAQEPLKNRDESRLMILNRLTG---EIKHDIFKNIISYLNPNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GVR +I L R+S + W + +P + K G F
Sbjct: 58 LNDTKVIPARLIGVR----EDTGGKIEFVLLKRLSSDEWEILVKPGRRAKIGSKFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI + G ++ FS GI E + +G +P+PPYI +K Y
Sbjct: 111 -GNGELKAEVISNTDVGGRIVRFSYEGI-FEEVLDKLGEMPVPPYIKKKLED----KNMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL + G+K FVTLHVG GTF PVK E + H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNKLLDDIRKYGVKTVFVTLHVGLGTFRPVKEEVIEKHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + AQA+N+ + GGRI+SVGTTS R LET E+GII+ SG+T+IFI PG
Sbjct: 225 HSEFYTVTEEAAQAINTARESGGRIISVGTTSTRTLETVADENGIIHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++A+D +++NFHLP+STL+M++SAF G E Y+ AI + YRFYS+GD L+
Sbjct: 285 YKYKAIDGIITNFHLPESTLIMMISAFAGKENVMNAYKTAIDNKYRFYSFGDAMLII 341
>gi|313894608|ref|ZP_07828171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. oral taxon 158 str. F0412]
gi|313440798|gb|EFR59227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. oral taxon 158 str. F0412]
Length = 341
Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + + DL L+ D +V
Sbjct: 1 MKVIDFDYELPEELIAQHPVEPRDTARLLTLDKVTGEVVHKEH--FYDLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGHRQGS----GGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL TVIDK G ++ F+ +G+ + I +G +PLPPYI K Y
Sbjct: 112 --DDRLSGTVIDKTEFGGRIIEFTCNGV-FDDVIQEIGEMPLPPYIHEKLED----KDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT ++GI+ SG T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKQKGSRIIAVGTTSVRTLESATNDEGILQGISGTTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVKERYRFFSFGDAMFI 340
>gi|308070377|ref|YP_003871982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Paenibacillus polymyxa E681]
gi|305859656|gb|ADM71444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Paenibacillus polymyxa E681]
Length = 342
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 212/359 (59%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DF+LP + IA P+ R ++RL+ ++ N + H SD+ +L D +V
Sbjct: 1 MNVNDYDFELPETLIAQTPLLDRSASRLLTLNKNNG---EVGHHTFSDIVQYLQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + L ++ + W +P K +KKG ++ F +
Sbjct: 58 LNDTRVIPARLFGIK----EDTGAKAEVLLLKQLQGDRWKALVKPGKKLKKGAVIVFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A + ++ + G +L FS GI + ++ +G +PLPPYI + Y
Sbjct: 114 -----LKAVIEEEGDMGGRVLSFSYDGI-FQEILNRLGQMPLPPYIKEQLDD----RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL ++ G+ V F+TLHVG GTF P+ V+ ++H+M
Sbjct: 164 QTVYARHEGSAAAPTAGLHFTEELLDQIKKKGVTVAFITLHVGLGTFRPMSVDTIEEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K+RGGR+V+VGTTS R LET + DG++ SG+T IFI
Sbjct: 224 HEEYYSLSQETADVLNETKARGGRVVAVGTTSCRTLETVGNKFLDGVLEASSGWTQIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FR VD +++NFHLPKSTL+MLVSA G E YQ AI YRF+S+GD ++
Sbjct: 284 PGYEFRVVDAMITNFHLPKSTLVMLVSALAGRENIMHAYQEAIDRQYRFFSFGDAMFIY 342
>gi|296331683|ref|ZP_06874152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675358|ref|YP_003867030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151278|gb|EFG92158.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413602|gb|ADM38721.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 342
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 208/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ + ++D + +F D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + + + W A+P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEAGDRWETLAKPAKRVKKGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F GI + +G +PLPPYI + Y
Sbjct: 111 -GDGRLKAVCTEELEHGGRRMEFQYDGI-FYEVLESLGEMPLPPYIKEQLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA ALN V+ GGRI+SVGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGRENVLRAYNHAVEEEYRFFSFGDAMLIL 342
>gi|312792494|ref|YP_004025417.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179634|gb|ADQ39804.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 346
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 203/358 (56%), Gaps = 16/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPEELIAQKPVEPRDSSRLMVILPD----GTIEHRIFRDIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V+ +V E + +G IPLPPYI + D YQ
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGVFEEVLERLGKIPLPPYIKE----ELDDLSRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLHFT LL R+ G+++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKVPGSAAAPTAGLHFTEELLDRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I A +N K G R+++VGTTS R+LE+ + E G + G+T+IFI PGY
Sbjct: 229 EEYYEISQDVADKINRAKEVGKRVIAVGTTSCRVLESCSDETGRVKAKKGWTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 289 NFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|326791986|ref|YP_004309807.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
lentocellum DSM 5427]
gi|326542750|gb|ADZ84609.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
lentocellum DSM 5427]
Length = 340
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 204/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F LP +IA P+ R ++RLMV+ I D+ A+L D +V
Sbjct: 1 MKTSDFYFHLPEEQIAQVPLKDRTTSRLMVLDQKTG---EIEHKHFYDIKAYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R ++ L R W V +P K K GD + F
Sbjct: 58 LNDTRVIPARLFGARPS-----GGKVEFLLLTRKEEKRWEVLVKPGKKAKIGDEIIF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V + G+ ++ F GI E + +G +PLPPYI K Y
Sbjct: 110 -GEGLLKAKVEEIIEDGKRIVRFEYEGI-FEEVLDALGEMPLPPYIHEKLED----KERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + +G+K+ +VTLHVG GTF PVKVED +H M
Sbjct: 164 QTVYSKHEGSAAAPTAGLHFTKELLKEIEEMGVKIAYVTLHVGLGTFRPVKVEDVLNHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N VK+ GGR+++VGTTS R LE+ E G+I SG+TNIFI PG
Sbjct: 224 HSEYYSIDEENATIINKVKAEGGRVIAVGTTSTRTLESNADEKGLIKAGSGWTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ V+ L++NFHLP+STL+MLVSA G E Y A++ YRF+S+GD L+
Sbjct: 284 YTFKCVEELITNFHLPESTLIMLVSALAGKEAILNAYNTAVNEGYRFFSFGDAMLI 339
>gi|325290229|ref|YP_004266410.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Syntrophobotulus glycolicus DSM 8271]
gi|324965630|gb|ADY56409.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Syntrophobotulus glycolicus DSM 8271]
Length = 340
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 203/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD+DLP IA PV PRD +RLMVV+ + L ++ F D +V
Sbjct: 1 MRVKDFDYDLPAELIAQHPVEPRDHSRLMVVNKEKG---ELFHALFKEIVDFFQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ +I L R ++W V +P K +K G + F
Sbjct: 58 VNKTKVIPARLFGVK----EGTGAKIEILLLNRKETDTWEVLVKPGKRLKIGQRVIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ RL +++ G ++ F G+ E + +G +PLPPYI K + Y
Sbjct: 111 -GEGRLIGELLEILPDGNRIIKFLYQGL-FENILDQLGQVPLPPYITEK----LENQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ ++ + G + + LHVG GTF PVK E+ +DH+M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTERLMDQIKAKGADIQEIVLHVGLGTFRPVKAENIEDHLM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I A+ +N+ K+RG RI++VGTT R LE A +G + + +T+IFI PG
Sbjct: 225 HTEYYQIGLQAAETINAAKARGSRIIAVGTTVSRSLEAAA-VNGKVEAGASWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFH P+STLLMLVSA G E K Y+ A+ YRFYS+GD +
Sbjct: 284 YTFQIVDALITNFHFPRSTLLMLVSALAGQELMLKAYETAVREKYRFYSFGDAMFI 339
>gi|312134251|ref|YP_004001589.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor owensensis OL]
gi|311774302|gb|ADQ03789.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor owensensis OL]
Length = 345
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPDELIAQKPVEPRDSSRLMVILPD----GTIEHRIFRDIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K ++G F + +
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARRGRKFIFGNGE 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++++ D+ G ++ F G+ E + +G IPLPPYI + D YQ
Sbjct: 117 LKAKVLHVNQDE---GTRIVRFYYEGV-FEEVLEKLGKIPLPPYIKE----ELEDLSRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKVPGSAAAPTAGLHFTEELLKKIEEKGVEILYVTLHVGLGTFKPVKVENIEEHRMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I A +N K G R+++VGTTS R+LE+ + E+G + G+T+IFI PGY
Sbjct: 229 DEYYEISQEVADRINKAKEFGKRVIAVGTTSCRVLESCSDENGRLKAKKGWTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ +
Sbjct: 289 EFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVEMKYRFFSFGDAMLILR 345
>gi|312623361|ref|YP_004024974.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kronotskyensis 2002]
gi|312203828|gb|ADQ47155.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kronotskyensis 2002]
Length = 346
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 204/358 (56%), Gaps = 16/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPDELIAQKPVEPRDSSRLMVILPDGR----IEHRIFRDIVDYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRRFVF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V+ +V E + +G IPLPPYI + D YQ
Sbjct: 113 GNGELKAEVLHVNREEGTRIVRFYYDGVFEEVLERLGKIPLPPYIKE----ELDDLSRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLHFT LLSR+ G+++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKVPGSAAAPTAGLHFTEELLSRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I A +N K G RI++VGTTS R+LE+ E+G + G+T+IFI PGY
Sbjct: 229 EEYYEISQDVADKINKAKELGKRIIAVGTTSCRVLESCCDENGKVKAKKGWTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 289 EFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|313895559|ref|ZP_07829115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 137 str. F0430]
gi|312975685|gb|EFR41144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 137 str. F0430]
Length = 346
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 149/360 (41%), Positives = 209/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP RIA P+ PRD++RLMV+ P I +L L D ++
Sbjct: 1 MDISDFDYDLPEKRIAQTPLEPRDASRLMVLDP---AEQTIEHRHFYELDVLLQPGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R + ++ L ++ + W +P K + GD + F +
Sbjct: 58 FNDTRVIPARLIGARD----KTGAKVEVLLLRQIDRDRWEALVKPGKKARIGDRIRFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +I + G ++ F GI E + +G +PLPPYI +K Y
Sbjct: 114 -----LSCGIISHTDFGGRIVKFIYQGI-FEEILDRLGEMPLPPYIRKKLSD----ADRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL RL G+ FVTLHVG GTF PV+ + ++H+M
Sbjct: 164 QTIYSRERGSAAAPTAGLHFTEELLVRLKEKGVIFGFVTLHVGLGTFRPVQEQTIENHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TAQ + K+ G RIV+VGTTS+R LE+A E G I P SG+T+IFI PG
Sbjct: 224 HREYYAIPEETAQIIRRAKAEGRRIVAVGTTSIRTLESAAGETGEIRPTSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD L+ ++
Sbjct: 284 YRFKVVDAIITNFHLPKSTLIMLISAFAGRSFILNAYKQAVDEGYRFFSFGDAMLIQGRK 343
>gi|157693175|ref|YP_001487637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus SAFR-032]
gi|167016403|sp|A8FFR0|QUEA_BACP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157681933|gb|ABV63077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus SAFR-032]
Length = 342
Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FDFDLP IA P+ RD++RLMV++ ++ S + + + D +V
Sbjct: 1 MKLELFDFDLPERLIAQVPLEKRDASRLMVLNKQTG---EVTHDTFSQITDYFQTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ ++ L + + W +P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGMK----EDTGAKVELLLLKQEEGDKWETLVKPAKRVKKGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F +GI + +G +PLPPYI + Y
Sbjct: 111 -GDGRLQAVCTEELEHGGRKVEFQYTGI-FYEVLESLGEMPLPPYIKEQLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYSKEVGSAAAPTAGLHFTNELLDALKEKGVHIAFITLHVGLGTFRPVSADRIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E ++ TA LN V+ GGRI+SVGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HAEFYEMNEETAAELNRVRKEGGRIISVGTTSTRTLETIASAHDGEFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E K Y A+ YRF+S+GD L+
Sbjct: 285 GYTFKAIDGMITNFHLPKSSLIMLVSALAGREHVLKAYNEAVKEEYRFFSFGDAMLI 341
>gi|194017396|ref|ZP_03056008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus ATCC 7061]
gi|194011264|gb|EDW20834.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus ATCC 7061]
Length = 342
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FDFDLP IA P+ RD++RLMV++ I S + + + D +V
Sbjct: 1 MKLELFDFDLPERLIAQVPLEKRDASRLMVLNKQTGA---IKHDTFSQITDYFQTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ ++ L + + W +P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGMK----EDTGAKVELLLLKQEEGDKWETLVKPAKRVKKGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F +GI + +G +PLPPYI + Y
Sbjct: 111 -GDGRLQAVCTEELEHGGRKVEFQYTGI-FYEVLESLGEMPLPPYIKEQLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYSKEVGSAAAPTAGLHFTNELLDALKEKGVHIAFITLHVGLGTFRPVSADRIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E ++ TA LN V+ GGRI+SVGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HAEFYEMNEETAAELNRVRKEGGRIISVGTTSTRTLETIASAHDGEFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E K Y A+ YRF+S+GD L+
Sbjct: 285 GYTFKAIDGMITNFHLPKSSLIMLVSALAGREHVLKAYNEAVKEEYRFFSFGDAMLI 341
>gi|282850102|ref|ZP_06259484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
parvula ATCC 17745]
gi|282580291|gb|EFB85692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
parvula ATCC 17745]
Length = 341
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLDKVSGEVKHKGH--FYDLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGHRQGS----GGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK N G ++ F+ +G+ + I +G +PLPPYI K Y
Sbjct: 112 --DDRLSGVIIDKTNFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEKLED----KDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVPQDTANRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALASREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|16803571|ref|NP_465056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes EGD-e]
gi|47097028|ref|ZP_00234601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 1/2a F6854]
gi|224499808|ref|ZP_03668157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes Finland 1988]
gi|224501529|ref|ZP_03669836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-561]
gi|254828235|ref|ZP_05232922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N3-165]
gi|254829710|ref|ZP_05234365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 10403S]
gi|254898303|ref|ZP_05258227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J0161]
gi|254912205|ref|ZP_05262217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J2818]
gi|254936533|ref|ZP_05268230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes F6900]
gi|21263872|sp|Q8Y6Z9|QUEA_LISMO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|16410960|emb|CAC99609.1| lmo1531 [Listeria monocytogenes EGD-e]
gi|47014610|gb|EAL05570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 1/2a F6854]
gi|258600623|gb|EEW13948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N3-165]
gi|258609127|gb|EEW21735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes F6900]
gi|293590178|gb|EFF98512.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J2818]
Length = 342
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 219/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 341
>gi|152976836|ref|YP_001376353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus subsp. cytotoxis NVH 391-98]
gi|189038510|sp|A7GTA0|QUEA_BACCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152025588|gb|ABS23358.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Bacillus
cytotoxicus NVH 391-98]
Length = 350
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I SD+ A+L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEKRETSRLMVLDRETGD---IEHKHFSDILAYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCVGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+K+ F+TLHVG GTF PV + +DH M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLQQKGVKLAFITLHVGLGTFRPVSTDKIEDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET TE DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSQETADLLNDVKVNGGRIITVGTTSTRTLETIATEHDGKLCGASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF G E Y A+ YRF+S+GD L
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFAGRENVLHAYNEAVKEKYRFFSFGDAMFL 341
>gi|315303291|ref|ZP_07873926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
ivanovii FSL F6-596]
gi|313628338|gb|EFR96836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
ivanovii FSL F6-596]
Length = 342
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 217/357 (60%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATG---EIKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNTWEALVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALQATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKEKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++++VGTTS+R LET A+ +G I SG+T+IFI+P
Sbjct: 225 HSEFYRLTEEAAERINRVKETGGKVIAVGTTSIRTLETIASRHEGNIVAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FRAVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFRAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEEQYRFFSFGDAMFI 341
>gi|313904205|ref|ZP_07837584.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Eubacterium
cellulosolvens 6]
gi|313471007|gb|EFR66330.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Eubacterium
cellulosolvens 6]
Length = 344
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 202/357 (56%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++DLP IA P+ R ++R+M + + D + +++ L D +V
Sbjct: 3 MKTSDFNYDLPVELIAQDPLEDRSASRMMYMDKETG---ELKDEIFTEVIDHLREGDCLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W RP K K G + F
Sbjct: 60 LNDTKVIPARLYGTK----KDTGALIEVLLLTRKQNDVWETLVRPGKKCKIGTEIVFGE- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + VID G + FS GI E + +G +PLPPYI K Y
Sbjct: 115 --EGLMTGKVIDVTEDGNRFIQFSYEGI-FEEILDRLGEMPLPPYIKHKLQD----KTMY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YAK GS AAPTAGLHFT LL ++ + G+K+ VTLHVG GTF PVKV+D H M
Sbjct: 168 NTVYAKNDGSAAAPTAGLHFTKELLEKISAKGVKIAHVTLHVGLGTFRPVKVDDVTQHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ ++ A+ +N K+ GGR++ VGTTS R LE+AT E+GI+ P S +TNIFI PG
Sbjct: 228 HSELYIVEEDQAKIINDTKAAGGRVICVGTTSCRTLESATDENGILQPGSAWTNIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+MLVSAF G ++ Y+ A+ YRF+S+GD ++
Sbjct: 288 YTFKIMDGLITNFHLPESTLIMLVSAFAGKDKVMHAYETAVEKKYRFFSFGDAMMII 344
>gi|315282447|ref|ZP_07870859.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
marthii FSL S4-120]
gi|313613910|gb|EFR87642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
marthii FSL S4-120]
Length = 342
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 219/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESG---EIKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L F+ GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFTYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAARINQIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 341
>gi|255658191|ref|ZP_05403600.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mitsuokella
multacida DSM 20544]
gi|260849499|gb|EEX69506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mitsuokella
multacida DSM 20544]
Length = 368
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 145/360 (40%), Positives = 205/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ +FD+DLP RIA P+ PR+++RLMV+ P I DL FL D ++
Sbjct: 1 MLLSDFDYDLPEERIAQVPIEPRNASRLMVLDPVT---KEIEHRHFYDLKEFLEPGDTLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L G R ++ + L R+ N W +P K K G+++ F +
Sbjct: 58 FNDTRVMPARLIGHR----DQTGGRVEVFLLRRLDANHWETLVKPGKKAKPGNVIRFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L TV + + G ++ F GI E + +G PLPPYI K Y
Sbjct: 114 -----LSCTVTEHTDFGGRIVEFHYDGI-FEEILDRLGETPLPPYIHEKLED----KERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT + L +G+ + FVTLHVG GTF PV VE+ ++H M
Sbjct: 164 QTVYNREEGSAAAPTAGLHFTKEQMQELREMGVNLGFVTLHVGLGTFRPVNVENIEEHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA+ + K G R+++VGTTS+R LE+A T I SG+T IFI PG
Sbjct: 224 HKEYYCIPDETAKLIMDTKKAGHRVIAVGTTSIRTLESAATAKNEIAGKSGWTGIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y F+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD + +K+
Sbjct: 284 YDFKIVDAIITNFHLPKSTLIMLISAFAGRNFVLNAYKTAVEMKYRFFSFGDAMFIRRKQ 343
>gi|312877417|ref|ZP_07737381.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor lactoaceticus 6A]
gi|311795806|gb|EFR12171.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor lactoaceticus 6A]
Length = 346
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 203/358 (56%), Gaps = 16/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ I + ++ +LN D +V
Sbjct: 5 KLSDFHYDLPEELIAQKPVEPRDSSRLMVILPD----GTIEHRIFREIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V+ +V E + +G IPLPPYI + D YQ
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGVFEEVLERLGKIPLPPYIKE----ELDDLSRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLHFT LL R+ G+++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKVPGSAAAPTAGLHFTEELLDRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I A +N K G R+++VGTTS R+LE+ + E G + G+T+IFI PGY
Sbjct: 229 EEYYEISQDVADKINRAKEVGKRVIAVGTTSCRVLESCSDETGRVKAKKGWTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 289 NFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|302670448|ref|YP_003830408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Butyrivibrio proteoclasticus B316]
gi|302394921|gb|ADL33826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Butyrivibrio proteoclasticus B316]
Length = 349
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 143/353 (40%), Positives = 199/353 (56%), Gaps = 16/353 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ FDLP IA P+ RD +L+V+ + H+ +++ +L D +V N
Sbjct: 11 TADYYFDLPQELIAQDPMEKRDECKLLVMDKETGN---VEHHVFNEVINYLQPGDCLVLN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKVI A+L GV+ + L R + W +P K ++ G + F G
Sbjct: 68 NTKVIPARLLGVK----EETGAAVEILLLKRKEADVWETLVKPGKKLRPGAKVSF----G 119
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+A ++D + G L+ F GI E + +G +PLPPYI K YQT
Sbjct: 120 DGILKAEIMDIVDEGNRLVKFYYDGI-WEEVLDRLGEMPLPPYITHKLQD----KNMYQT 174
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK +GS AAPTAGLHFT LL ++ G+ + FVTLHVG GTF PVKV + +H MH+
Sbjct: 175 VYAKYEGSAAAPTAGLHFTDELLDKIREKGVDIAFVTLHVGLGTFRPVKVTNVKEHHMHT 234
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A +N K G R++ VGTTS R +E+A EDG ++ SG T+IFI PGY+
Sbjct: 235 EWYQVTQEAADKINKAKESGHRVICVGTTSCRTIESAAGEDGTLSAASGDTSIFIYPGYK 294
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ +D L++NFHLP+STL+MLVSAF G E Y+ AI YRF+S+GD L
Sbjct: 295 FKLMDGLITNFHLPESTLVMLVSAFAGREHVLNAYETAIKEKYRFFSFGDACL 347
>gi|254852155|ref|ZP_05241503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-503]
gi|254931466|ref|ZP_05264825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HPB2262]
gi|300764802|ref|ZP_07074792.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N1-017]
gi|258605458|gb|EEW18066.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-503]
gi|293583018|gb|EFF95050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HPB2262]
gi|300514478|gb|EFK41535.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N1-017]
gi|328465567|gb|EGF36796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 1816]
gi|328474891|gb|EGF45691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 220]
Length = 342
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 219/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 341
>gi|311031510|ref|ZP_07709600.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. m3-13]
Length = 342
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 200/357 (56%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV++ + + ++ D +V
Sbjct: 1 MKIDLFDFHLPEELIAQTPLEQREASRLMVLNKKTGNLT--HEPTFRSILDYVKEGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ + +I L ++ ++W +P+K +K+G ++ F
Sbjct: 59 LNDTRVLPARLFGVK----SETGAKIEVLLLKQLEGDTWETLIKPAKRVKEGTVVSF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + G L F GI + +G +PLPPYI + Y
Sbjct: 112 -GDGRLTAICTGESEHGGRKLDFRYEGI-FYEVLDSLGEMPLPPYIKEQLED----RDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT LL L G+ F+TLHVG GTF PV V+ ++H M
Sbjct: 166 QTVFARETGSAAAPTAGLHFTEELLDALKDKGVHTAFITLHVGLGTFRPVSVDSVEEHDM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA+ LN V+S GGRI++VGTTS R LET + G SG+TNIFI PG
Sbjct: 226 HAEFYQMSEGTARLLNEVRSNGGRIITVGTTSTRTLETIARDHGEFKEASGWTNIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F A+D +++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 286 YNFSAIDGMITNFHLPKSTLIMLVSALAGRENVMHAYEEAVKERYRFFSFGDAMLIL 342
>gi|297529248|ref|YP_003670523.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. C56-T3]
gi|297252500|gb|ADI25946.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. C56-T3]
Length = 342
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 201/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++LN D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKRTGA---IRHETFRNIISYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K +K G L F
Sbjct: 58 LNDTRVMPARLYGEK----EETGGTVEVLLLKQLDGDRWETLVKPGKRVKPGTKLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +LEA +D G +L FS G+ ++ +G +PLPPYI K Y
Sbjct: 111 -GGGKLEAVCLDTLEHGGRVLEFSYDGL-FYEVLAELGEMPLPPYIKEKLDD----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV+V++ + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGVHIVFITLHVGLGTFRPVQVDEVEKHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN V+ +GGRI++VGTTS R LET A +G SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAETLNRVREQGGRIIAVGTTSTRTLETIAGKHNGRFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+ +D L++NFHLPKSTL+MLVSA G E YQ + YRF+S+GD L+
Sbjct: 285 GYEFKGIDGLVTNFHLPKSTLIMLVSALAGRENILHAYQVGVKERYRFFSFGDAMLII 342
>gi|293375248|ref|ZP_06621532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sanguinis PC909]
gi|325840658|ref|ZP_08167109.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sp. HGF1]
gi|292646146|gb|EFF64172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sanguinis PC909]
gi|325490222|gb|EGC92556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sp. HGF1]
Length = 342
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 200/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA P+ RD++RLMV++ + + D+ +L ND +V
Sbjct: 1 MRVDQFDFELPDELIAQTPLKDRDTSRLMVLNKKTG---EVKHEVFHDVLNYLRPNDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L G + I L + + W +P+K +K G I+ F
Sbjct: 58 LNNTKVMPARLMGQKP----DTGASIEVLLLKQEQQDCWETLVKPAKRVKVGTIVEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A I + G+ + F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKAECISTGDMGKRVFKFMYDGI-FYEVLDSLGEMPLPPYITEKLDD----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLHFT LL + + G+K+ +VTLHVG GTF PV V+ ++H M
Sbjct: 165 QTVFAKEIGSAAAPTAGLHFTPELLEEIQAKGVKIAYVTLHVGLGTFRPVSVDSVEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA LN GGRI++VGTTS R LET + G G+T+IFI P
Sbjct: 225 HAEFYQMSQETADILNQTHELGGRIITVGTTSTRTLETIARDHGKFVACEGWTDIFIYPP 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D +++NFHLPKSTL+ML+S+ G + Y+ A+ YRF+S+GD L+
Sbjct: 285 YQFKGIDGMITNFHLPKSTLIMLISSLAGQDAVMNAYKIAVEEKYRFFSFGDAMLII 341
>gi|226224132|ref|YP_002758239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes Clip81459]
gi|254824410|ref|ZP_05229411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-194]
gi|254992899|ref|ZP_05275089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-064]
gi|255520699|ref|ZP_05387936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-175]
gi|259551458|sp|C1KVH8|QUEA_LISMC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|225876594|emb|CAS05303.1| Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|293593645|gb|EFG01406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-194]
Length = 342
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 219/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 341
>gi|225018503|ref|ZP_03707695.1| hypothetical protein CLOSTMETH_02450 [Clostridium methylpentosum
DSM 5476]
gi|224948704|gb|EEG29913.1| hypothetical protein CLOSTMETH_02450 [Clostridium methylpentosum
DSM 5476]
Length = 340
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 137/357 (38%), Positives = 193/357 (54%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ PRD +R++ + N ++ D+ L D +V
Sbjct: 1 MNTSDFYFDLPKELIAQTPIEPRDHSRMLCLDRNTG---KLAHKHFYDVVDLLEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G + +I L + + W + +P K K G F
Sbjct: 58 INDSRVLPARLYGKK----QGTGSDIEFLLLEQKQQDVWEILCKPGKKAKVGAKFTFG-- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A +I+ + G + F+ G + +G +PLPPYI K Y
Sbjct: 112 ---GLLDAEIIEVCDDGNRIAKFTYDG-SFFDILDQIGQMPLPPYITEKLED----KERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GS AAPTAGLHFT LL +L + G+ + VTLHVG GTF PVKV+D H M
Sbjct: 164 QTVYADELGSAAAPTAGLHFTPELLGKLENKGVNIARVTLHVGLGTFRPVKVDDVTKHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K+ G R+++VGTTS R LE+ T G I G+T+IFI PG
Sbjct: 224 HSEHYAISQETADLINRTKANGKRVIAVGTTSCRTLESVATFTGGIQKAEGYTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+MLVSAF G ++ + Y A+ YRF+S+GD +
Sbjct: 284 YEFKVLDGLITNFHLPESTLIMLVSAFAGYDQVMEAYHTAVQERYRFFSFGDAMCIL 340
>gi|163816609|ref|ZP_02207972.1| hypothetical protein COPEUT_02799 [Coprococcus eutactus ATCC 27759]
gi|158447866|gb|EDP24861.1| hypothetical protein COPEUT_02799 [Coprococcus eutactus ATCC 27759]
Length = 355
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 147/365 (40%), Positives = 202/365 (55%), Gaps = 21/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R +RLMV+ I D+ +LN D +V
Sbjct: 2 MKLTDFYYDLPQELIAQDPLLKRSESRLMVLDRK---DNTIEHKHFYDVIDYLNPGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ I L R +W +P K K G + F S+
Sbjct: 59 INDTRVLPARLMGVK----EDTGASIEVLLLKRKDDRTWETLVKPGKKCKVGARIVFGSE 114
Query: 121 DGQ---------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
+ +L V+ G L+ F GI E + +G +PLPPYI K
Sbjct: 115 SNEPDPETGLIKGKLVGEVVGIVEEGNRLIRFEFDGI-FEEILDELGQMPLPPYITHKLE 173
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
YQT YA+ GS AAPTAGLHFT+ LL ++ + GIK+ VTLHVG GTF PVK
Sbjct: 174 D----KNRYQTVYAEHDGSAAAPTAGLHFTTELLDQIKAKGIKIAHVTLHVGLGTFRPVK 229
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
E+ DH MHSE I+ A +N K+ GGR+VSVGTTS R LE+ + +DG ++ S
Sbjct: 230 EENILDHHMHSEFCIIEQDAADMINETKAAGGRVVSVGTTSTRTLESMSDDDGTVHAGSK 289
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+T+IFI PGY+F+ +D L++NFHLP+STLLMLVSA E + Y+ A+ YRF+S+G
Sbjct: 290 WTDIFIYPGYKFKVIDALITNFHLPESTLLMLVSALYDREHILEAYKVAVEEKYRFFSFG 349
Query: 352 DTSLL 356
D L+
Sbjct: 350 DAMLI 354
>gi|217964322|ref|YP_002350000.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HCC23]
gi|254764281|sp|B8DHL7|QUEA_LISMH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|217333592|gb|ACK39386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HCC23]
gi|307571112|emb|CAR84291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes L99]
Length = 342
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 219/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K +GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKVQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGDAMFI 341
>gi|288555345|ref|YP_003427280.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudofirmus OF4]
gi|288546505|gb|ADC50388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudofirmus OF4]
Length = 341
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RL+V+ + I D + S + +L S D +V
Sbjct: 1 MDVRDFDFYLPDELIAQTPLLDRTASRLLVLDKDNGA---IKDDVFSSITDYLKSGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ +I L ++ + W A+P+K +KKG + F
Sbjct: 58 LNDTRVLPARLYGVK----EDTGAKIELLLLKQLEGDKWETLAKPAKRVKKGTTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L AT I++ + G ++ + GI L + +G +PLPPYI + Y
Sbjct: 111 -GEGLLTATCIEETDQGGRVVELAYEGI-LHEVLDQLGEMPLPPYIKEQLDDQ----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS AAPTAGLHFT +LL L G+ + F+TLHVG GTF PV VED + H M
Sbjct: 165 QTVFAKNRGSAAAPTAGLHFTEDLLQTLQDKGVHLAFITLHVGLGTFRPVSVEDVESHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA+ LN VK GG++V+VGTTS R LET E+G SG+T+IFI PG
Sbjct: 225 HAEYYQMSEGTARLLNEVKENGGKVVAVGTTSARTLETIMNENGTYCEASGWTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLPKSTL+MLVSA G E + Y HA+ YRF+S+GD +
Sbjct: 285 YKFKGIDGLLTNFHLPKSTLVMLVSALAGREHILQAYNHAVKERYRFFSFGDAMFI 340
>gi|290893933|ref|ZP_06556909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-071]
gi|290556471|gb|EFD90009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-071]
Length = 342
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 220/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGDAMFI 341
>gi|312128550|ref|YP_003993424.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor hydrothermalis 108]
gi|311778569|gb|ADQ08055.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor hydrothermalis 108]
Length = 346
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 204/358 (56%), Gaps = 16/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ + + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPDELIAQKPVEPRDSSRLMVILPDGR----LEHRIFRDIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V+ +V E + +G IPLPPYI + D YQ
Sbjct: 113 GNGELKAEVLHVNQEEGTRIVRFYYEGVFEEVLERLGKIPLPPYIKE----ELDDLSRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKVPGSAAAPTAGLHFTEELLEKISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I A+ +N K G R+++VGTTS R+LE+ E+G + G+T+IFI PGY
Sbjct: 229 EEYYEISEDVAERINRAKELGKRVIAVGTTSCRVLESCCDENGKVRAKKGWTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 289 EFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|153009507|ref|YP_001370722.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum anthropi ATCC 49188]
gi|166216733|sp|A6X0Y9|QUEA_OCHA4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151561395|gb|ABS14893.1| Queuosine biosynthesis protein [Ochrobactrum anthropi ATCC 49188]
Length = 363
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 206/361 (57%), Positives = 252/361 (69%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD ARL+ V P D V +LP L DA+V
Sbjct: 1 MRVDLFDFDLPEESIALRPAEPRDHARLLRVRPG----QPFEDRQVFELPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMR P+ W + RP K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERDGNISQ--VSATLHMRTGPDRWKAFLRPGKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KR D RD
Sbjct: 115 GSSCFLGTLDATVAEKGDAGEALLVFDLSGAMLDEAIASVGHIPLPPYIASKRAEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + G++ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKAKGVEEHFVTLHVGAGTFLPVKADDTTD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSEIG++ TA ALN+V RGG+I+ VGTTSLRL+E+A EDGII PW+G T+IFI
Sbjct: 235 HKMHSEIGYVSQRTADALNAVHERGGKIICVGTTSLRLIESAAGEDGIIRPWAGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+FRAVD+LM+NFHLP+STL MLVSAF G E Y+HAIS+ YRFYSYGD SLL
Sbjct: 295 TPGYKFRAVDLLMTNFHLPRSTLFMLVSAFSGFETMHAAYEHAISNGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|284801921|ref|YP_003413786.1| hypothetical protein LM5578_1676 [Listeria monocytogenes 08-5578]
gi|284995063|ref|YP_003416831.1| hypothetical protein LM5923_1628 [Listeria monocytogenes 08-5923]
gi|284057483|gb|ADB68424.1| hypothetical protein LM5578_1676 [Listeria monocytogenes 08-5578]
gi|284060530|gb|ADB71469.1| hypothetical protein LM5923_1628 [Listeria monocytogenes 08-5923]
Length = 342
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 219/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVGEQYRFFSFGDAMFI 341
>gi|46907759|ref|YP_014148.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 4b F2365]
gi|67460874|sp|Q71ZD9|QUEA_LISMF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|46881028|gb|AAT04325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes serotype 4b str. F2365]
Length = 342
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 218/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYGKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 341
>gi|298291669|ref|YP_003693608.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Starkeya
novella DSM 506]
gi|296928180|gb|ADH88989.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Starkeya
novella DSM 506]
Length = 364
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 190/363 (52%), Positives = 250/363 (68%), Gaps = 6/363 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD+AR++VV P ++D V DL L DA+V
Sbjct: 1 MRVDLFDFDLPPERIALRPVSPRDAARMLVVRP--GATPELADAHVHDLANLLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK-EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L+G+R ++ E + LH RV+P+ W ARP+K + GD + F
Sbjct: 59 VNDTRVVPARLDGIRRRETSQGEGVRVEAMLHKRVAPDRWLALARPAKRLAPGDRIAFGG 118
Query: 120 QDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ L+ATV K GEI L F ++G L+ I+ VG IPLPPYIA KRP DA+D
Sbjct: 119 EGNACLLGTLDATVEGKGEAGEIELRFDLAGAALDEAIAAVGHIPLPPYIAAKRPDDAQD 178
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +GSVAAPTAGLHFT L++RL G++ + VTLHVGAGTF+PVK +DT
Sbjct: 179 RADYQTMFAAHEGSVAAPTAGLHFTPELIARLEERGVETHRVTLHVGAGTFLPVKADDTT 238
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A TA ALN+VK+RGGR++++GTT+ RL+E+A +E G ++ W G T+IF
Sbjct: 239 GHRMHAEWGEVSAETAVALNAVKARGGRVITIGTTATRLIESAASEGGRLDAWRGETDIF 298
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR +D +++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL
Sbjct: 299 ITPGYRFRFIDGMLTNFHLPRSTLVMLVAAFIGHEVQKRAYAHAIASGYRFYSYGDACLL 358
Query: 357 FQK 359
K
Sbjct: 359 LPK 361
>gi|160880412|ref|YP_001559380.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium phytofermentans ISDg]
gi|189038516|sp|A9KK69|QUEA_CLOPH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|160429078|gb|ABX42641.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium phytofermentans ISDg]
Length = 364
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 148/366 (40%), Positives = 201/366 (54%), Gaps = 21/366 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+V+ N ++ H+ ++ +L D +V
Sbjct: 1 MKKQDFYFDLPEELIAQDPLEDRSGSRLLVLDKNTG---KVTHHIFKEIVKYLKKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINR---------REKEISCTLHMRVSPNSWSVYARPSKVIKK 111
NNTKVI A+L G R I L R + W RP K K
Sbjct: 58 LNNTKVIPARLMGERIIEKTPLAPGHSYGKEGTPIELLLLKRKPDDVWETLVRPGKKAKV 117
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
G + F G +L +ID G L+ F+ GI E + +G +PLPPYI
Sbjct: 118 GTKISF----GDGKLIGEIIDVVEEGNRLVKFTYQGI-FEEILDELGQMPLPPYITH--- 169
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D YQT YAK +GS AAPTAGLHFT+ LL ++ +G+ + VTLHVG GTF PVK
Sbjct: 170 -ELADKNRYQTVYAKHEGSAAAPTAGLHFTNELLKQIEDMGVVIANVTLHVGLGTFRPVK 228
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+D DH MHSE+ ++ A+ +N K GGRI+ VGTTS R +E+A EDG + SG
Sbjct: 229 EDDILDHHMHSEVYQVEESEAKKINDAKRAGGRIICVGTTSCRTIESAANEDGFVQAKSG 288
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PGY+F+ ++ L++NFHLP+STLLMLVSA E Y+ A+ YRF+S+G
Sbjct: 289 ATEIFIYPGYKFKVLNCLITNFHLPESTLLMLVSALASREHIIAAYEEAVKERYRFFSFG 348
Query: 352 DTSLLF 357
D +
Sbjct: 349 DAMFIT 354
>gi|302870943|ref|YP_003839579.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor obsidiansis OB47]
gi|302573802|gb|ADL41593.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor obsidiansis OB47]
Length = 346
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 203/358 (56%), Gaps = 16/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRD++RLMV+ P+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPDELIAQKPVEPRDNSRLMVILPD----GTIEHRIFRDIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K ++G F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARRGRKFVF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V+ +V E + +G IPLPPYI + D YQ
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGVFEEVLEKLGKIPLPPYIKE----ELEDLSRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKVPGSAAAPTAGLHFTEELLEKISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I A +N K G R+++VGTTS R+LE+ + E G + G+TNIFI PGY
Sbjct: 229 EEYYEISQDVADRINRAKELGKRVIAVGTTSCRVLESCSDEAGRVKAQKGWTNIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 289 NFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|222528286|ref|YP_002572168.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor bescii DSM 6725]
gi|222455133|gb|ACM59395.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor bescii DSM 6725]
Length = 346
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 204/358 (56%), Gaps = 16/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPDELIAQKPVEPRDSSRLMVILPDGR----IEHRIFRDIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EETGSFIEFLLIKRLDINTWEVMTRPGKKARKGRRFVF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V+ +V E + +G IPLPPYI + D YQ
Sbjct: 113 GNGELKAEVLHVNREEGTRVVRFYYDGVFEEVLERLGKIPLPPYIKE----ELDDLSRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLHFT LLSR+ G+++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKVPGSAAAPTAGLHFTEELLSRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I + +N K G R+++VGTTS R+LE+ E+G + G+T+IFI PGY
Sbjct: 229 EEYYEISEDVTERINRAKELGKRVIAVGTTSCRVLESCCDENGKVKAKKGWTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 289 EFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|16079825|ref|NP_390650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221310710|ref|ZP_03592557.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221315034|ref|ZP_03596839.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221319955|ref|ZP_03601249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221324236|ref|ZP_03605530.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. SMY]
gi|321312300|ref|YP_004204587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis BSn5]
gi|3914532|sp|O32054|QUEA_BACSU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|2635237|emb|CAB14732.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|6977807|emb|CAB75332.1| QueA protein [Bacillus subtilis subsp. subtilis str. 168]
gi|291485182|dbj|BAI86257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. natto BEST195]
gi|320018574|gb|ADV93560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis BSn5]
Length = 342
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ + ++D + +F N D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + + + W A+P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQETGDKWETLAKPAKRVKKGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F GI + +G +PLPPYI + Y
Sbjct: 111 -GDGRLKAICTEELEHGGRKMEFQYDGI-FYEVLESLGEMPLPPYIKEQLDD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV ++ ++H M
Sbjct: 165 QTVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA ALN V+ GGRI+SVGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGRENILRAYNHAVEEEYRFFSFGDAMLII 342
>gi|220935237|ref|YP_002514136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thioalkalivibrio sp. HL-EbGR7]
gi|254764288|sp|B8GTQ5|QUEA_THISH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219996547|gb|ACL73149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thioalkalivibrio sp. HL-EbGR7]
Length = 364
Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 212/359 (59%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LPP IA RP+ R ++RL+ + + ++D DLP LN D +V
Sbjct: 1 MRLSDFHYELPPELIAQRPLAERSASRLLCLDRDTGA---LADRRFRDLPDLLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GV+ + + + + + R SK +G +L
Sbjct: 58 FNDTRVIPARLLGVK----RDTGGRVEVLVERVLDEHRVLAHVRASKSPGEGVVLWL--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ LEA V + G++ ++ + + + G +PLPPYI R + Y
Sbjct: 111 --EEALEAVVEGR--EGDLFCLWFAGDLPVIELLERHGHMPLPPYIERPDAAED--RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF +++++R+ + G++ VTLHVGAGTF PV+VED H+M
Sbjct: 165 QTVFASRPGAVAAPTAGLHFDADIMARMRARGVETAAVTLHVGAGTFQPVRVEDVSRHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + + ++RGGR+V+VGTT++R LE+A DG + P+SG T +FITPG
Sbjct: 225 HAEWTEVSTQVCDQVAACRARGGRVVAVGTTAVRSLESAAA-DGELKPFSGDTRLFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y FR VD L++NFHLP+STLLMLVSAF G E + Y+HA++ YRF+SYGD + +
Sbjct: 284 YTFRVVDALVTNFHLPESTLLMLVSAFAGYEPVMQAYRHAVAERYRFFSYGDAMFIGPQ 342
>gi|153955757|ref|YP_001396522.1| hypothetical protein CKL_3143 [Clostridium kluyveri DSM 555]
gi|219856124|ref|YP_002473246.1| hypothetical protein CKR_2781 [Clostridium kluyveri NBRC 12016]
gi|189038515|sp|A5N205|QUEA_CLOK5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764273|sp|B9E5Q7|QUEA_CLOK1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146348615|gb|EDK35151.1| QueA [Clostridium kluyveri DSM 555]
gi|219569848|dbj|BAH07832.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 341
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA +P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 1 MEVTDFDFYLPEELIAQKPLEQRDEGRLMVLDKKTG---KVCHKIFKDIVYYLNPGDCVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GVR +I L R +W +P + K G+ +F
Sbjct: 58 LNDTRVLPARLIGVR----EDTMGKIEFLLLKRRDNFTWETLVKPGRRAKVGNRFNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A V+ G ++ F +G+ E + +G IPLPPYI K + Y
Sbjct: 111 -GSGQLKAEVVSINEDGNRIVRFEYNGV-FEEILDKLGQIPLPPYIKEK----LENKELY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL L G+ + F+TLHVG GTF PVKVE+ +DH M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLRELREKGVNLAFLTLHVGLGTFRPVKVENIEDHAM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G ++SVGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEFYSMSKETADMINAAKESGHSVISVGTTSCRTLETIGDENGRVKEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLPKSTL+MLVSAF G E T Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDKLITNFHLPKSTLIMLVSAFYGRENTLHAYNVAVKEKYRFFSFGDAMFI 340
>gi|15613790|ref|NP_242093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
halodurans C-125]
gi|20139775|sp|Q9KDI6|QUEA_BACHD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|10173843|dbj|BAB04946.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus halodurans
C-125]
Length = 347
Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 149/360 (41%), Positives = 211/360 (58%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RL+V+ + + D DL F+ + D +V
Sbjct: 1 MNVRDFDFHLPEKLIAQTPLKDRTASRLLVLDKHTGA---VEDKKFPDLLQFIEAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ L ++ + W +P+K +K G I+ F
Sbjct: 58 LNDTRVLPARLFGVK----EETGAQVEVLLLKQMEGDRWETLVKPAKRLKVGTIIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L AT + + G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GNGELTATCVQELEHGGRVLEFSYEGI-FHEVLDQLGEMPLPPYIKEQLDD----KDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVFAKNRGSAAAPTAGLHFTEELLDQLKQKGVHLAFITLHVGLGTFRPVSVEEIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A TA+ LN VK +GGRI++VGTTS R LET E SG+T+IFI PG
Sbjct: 225 HAEFYQMSAGTARLLNEVKRQGGRIIAVGTTSARTLETIRQEHDEFVETSGWTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y F+ +D L++NFHLPKSTL+MLVSA G E Y HA+ +YRF+S+GD ++ K+
Sbjct: 285 YEFKGIDGLITNFHLPKSTLVMLVSALAGRENLLNAYAHAVKQSYRFFSFGDAMFIYDKK 344
>gi|167770633|ref|ZP_02442686.1| hypothetical protein ANACOL_01979 [Anaerotruncus colihominis DSM
17241]
gi|167667228|gb|EDS11358.1| hypothetical protein ANACOL_01979 [Anaerotruncus colihominis DSM
17241]
Length = 342
Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 194/357 (54%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F+LP +IA P+ PRD +R++ + + DLP +L++ D ++
Sbjct: 1 MKTSDFFFELPERQIAQTPIEPRDHSRMLYLDRQTGA---VKHLHFYDLPDYLDAGDTLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N ++VI A+L GV+ + L + + W V +P K K G F
Sbjct: 58 VNTSRVIPARLYGVK----EYSGGHMQFLLLEQKERDIWEVMVKPGKKAKTGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+ G L+ G + + +G +PLPPYI + D Y
Sbjct: 111 -GDGLLVGEVLQTVEGGNRLVRMYYEGPSIYPVLEKIGNMPLPPYIT----AELSDRERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT L+ RL GI + V LHVG GTF PV+VED H M
Sbjct: 166 QTIYSKQPGSAAAPTAGLHFTPELIDRLREKGINLANVVLHVGIGTFRPVRVEDVTKHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ TA +N +RG R++ VGTTS R +E+ ++ G I G T+IFI PG
Sbjct: 226 HSEHYYLPQETADLINETHARGKRVIGVGTTSCRTVESVASKCGEIKADEGDTSIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+MLVSAF G E T + YQ A+ YRF+S+GD L+
Sbjct: 286 YTFKVLDGLITNFHLPESTLIMLVSAFAGYEHTMRAYQIAVGENYRFFSFGDAMLIL 342
>gi|83590531|ref|YP_430540.1| S-adenosylmethionine [Moorella thermoacetica ATCC 39073]
gi|123524237|sp|Q2RHU2|QUEA_MOOTA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|83573445|gb|ABC19997.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Moorella
thermoacetica ATCC 39073]
Length = 342
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 214/357 (59%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD++LPP +IA +PV PRD++RL+V+H + DLP +L+ D +V
Sbjct: 1 MRIEEFDYELPPGQIAQQPVEPRDASRLLVLHREGG---FLEHRHFYDLPRYLHPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G R +I L R ++W RP + + G L F
Sbjct: 58 VNETKVIPARLWGYRAG----TGAKIEVLLLTRQEGDTWETLVRPGRRVPVGAELIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V G ++ FS E + +G +PLPPYI K D Y
Sbjct: 111 -GRGELQARVKGVTPAGGRIMEFSYQEGPWEALLERLGEMPLPPYIKEK----PADPGRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL L GI++ + LHVG GTF PVKVE+ +H+M
Sbjct: 166 QTVYAREEGSAAAPTAGLHFTPRLLKELREQGIEIASILLHVGLGTFRPVKVENIQEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A +N+ ++RG R+V+VGTT +R LET T DG+I+ SG+T+IFI PG
Sbjct: 226 HAEYYAVTPAAAATINAARARGHRVVAVGTTVVRTLETVATADGVIHAGSGWTDIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+A+D L++NFHLP+STLLMLVSAF G E+ Y+ A+ YRFYS+GD L+
Sbjct: 286 YRFKAIDSLITNFHLPRSTLLMLVSAFAGREKILDAYRVAVREGYRFYSFGDAMLIL 342
>gi|317128205|ref|YP_004094487.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
cellulosilyticus DSM 2522]
gi|315473153|gb|ADU29756.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
cellulosilyticus DSM 2522]
Length = 342
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 140/358 (39%), Positives = 200/358 (55%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA P+ R ++RL+V++ I DL + + D +V
Sbjct: 1 MDVTQFDFHLPEELIAQTPLADRTASRLLVLNRENGS---IEHRHFKDLLQYFSKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L G++ +I L S +W +P+K +K G +
Sbjct: 58 LNNTKVLPARLFGIK----EDTGAKIELLLLREESDYTWEALVKPAKRVKIGTKIVI--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L +++ G + F GI + +G +PLPPYI + + Y
Sbjct: 111 -GEGKLIGKCVEELPEGIRKIQFEFDGI-FNEILDELGEMPLPPYIQEQ----LDEKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLHFT LL + +G+ + F+TLHVG GTF PV VE+ +H M
Sbjct: 165 QTVFAKHSGSAAAPTAGLHFTKELLQNIEQLGVHIVFITLHVGLGTFRPVAVENVKEHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H E + + A LN +S G +I++VGTTS+R LET A+ DG SG+TNIFI P
Sbjct: 225 HEEYYDMTSEAASVLNEARSNGNKIIAVGTTSVRTLETIASKHDGAFTASSGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+++A+D +++NFHLPKSTL+MLVSAF G Y A+ YRF+S+GD L+
Sbjct: 285 GYQYKAIDGMITNFHLPKSTLVMLVSAFAGRGNILSAYNAAVEKKYRFFSFGDAMLII 342
>gi|313633141|gb|EFS00030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri FSL N1-067]
Length = 342
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 216/357 (60%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATG---EIKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGTKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGELVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEQQYRFFSFGDAMFI 341
>gi|239831893|ref|ZP_04680222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum intermedium LMG 3301]
gi|239824160|gb|EEQ95728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum intermedium LMG 3301]
Length = 363
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 206/361 (57%), Positives = 253/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP+ PRD ARL+ V P D V +LP L+ DA+V
Sbjct: 1 MRVDLFDFDLPEESIALRPIEPRDHARLLRVRPG----QPFEDRQVFELPDLLHPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMR + W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERDGNISQ--VSATLHMRSGADRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KR D RD
Sbjct: 115 GSSCFLGTLDATVAEKGDAGEALLVFDLSGAMLDEAIASVGHIPLPPYIASKRAEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT LL ++ + G++ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPELLEKIKAKGVEEHFVTLHVGAGTFLPVKADDTAD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSEIG + TA ALN+V RGGRIV VGTTSLRL+E+A EDG+I PWSG T+IFI
Sbjct: 235 HKMHSEIGHVSQRTADALNAVHERGGRIVCVGTTSLRLIESAAGEDGVIRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+FRAVD+LM+NFHLP+STL MLVSAF G++ + Y HAIS+ YRFYSYGD SLL
Sbjct: 295 TPGYKFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMRAAYDHAISNGYRFYSYGDGSLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|322392655|ref|ZP_08066115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus peroris ATCC 700780]
gi|321144647|gb|EFX40048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus peroris ATCC 700780]
Length = 342
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 202/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL++V+ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEQRDASRLLIVNRKTG---EFQDRHFHSIIEMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----EETGGHVELLLLKNTVGDEWEVLAKPAKRLKVGARVIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYEGI-FLEVLESLGEMPLPPYIHEKLDDQ----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLEEIQQKGVHLVYLTLHVGLGTFRPVTVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +K GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQIKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLEAYQHAIEERYRFFSFGDAMFIY 342
>gi|304436494|ref|ZP_07396468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 149 str. 67H29BP]
gi|304370540|gb|EFM24191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 149 str. 67H29BP]
Length = 343
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 211/356 (59%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP +IA P PRDS+R+MV+ P I L +L D ++
Sbjct: 1 MNISDFDYFLPEEQIAQVPADPRDSSRMMVLSPKTQS---IEHRHFYQLDEYLTDGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GVR + L ++ + W V +P K ++ G ++ F +
Sbjct: 58 FNDTRVIPARLIGVR----QPTGGKAEVFLLRQLERDRWEVLVKPGKKMRVGSVITFGHE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+ + G ++ FS GI E + +GT+PLPPYI Y
Sbjct: 114 -----LSCEVLAYTDFGGRIVKFSYEGI-FEEILERLGTMPLPPYIHETLQD----PERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT L+ RL G+++ FVTLHVG GTF PV+V++ +DH+M
Sbjct: 164 QTIYSREKGSAAAPTAGLHFTEALMDRLRKKGVRLGFVTLHVGLGTFRPVQVDEIEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA + K G R+++VGTTS+R LE+A + G+I G+TNIFI PG
Sbjct: 224 HSEFYSIPTETADLIRMAKQEGRRVIAVGTTSIRTLESAAVDHGMIEAKQGWTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD +++NFHLPKSTL+MLVSAF G E T K Y+ A+ YRF+S+GD L+
Sbjct: 284 YQFKIVDAVITNFHLPKSTLIMLVSAFAGREFTLKAYRTAVEENYRFFSFGDAMLI 339
>gi|261366941|ref|ZP_05979824.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Subdoligranulum variabile DSM 15176]
gi|282571058|gb|EFB76593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Subdoligranulum variabile DSM 15176]
Length = 342
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 203/357 (56%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV++ I + DLP +L D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPAEPRDAARLMVLNRKNDT---IEHAIFHDLPKYLEKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A+L G + L +V ++W ARP K ++ G + F
Sbjct: 58 VNNSKVLPARLLGTKV----PTGAVCELLLLRQVKGDTWECLARPGKRMQPGTKVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V + G + F+ L ++ G +PLPPYI ++ ++ Y
Sbjct: 111 -GDGTLTAVVDETMPDGNKFVTFTYDTETLYEKLDEFGKMPLPPYITKQLEDQSQ----Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + VTLHVG GTF PV E+ +DH M
Sbjct: 166 QTVYAKELGSAAAPTAGLHFTPELLDTIRANGVNIAEVTLHVGLGTFRPVNEEEIEDHQM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA A+N+ ++ G R+++VGTTS R LE + G I P SG T+IFI PG
Sbjct: 226 HSEWYSVSEDTANAINATRASGHRVIAVGTTSCRTLEAVWAKYGKIVPCSGNTDIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
A+D +++NFHLP+STL+ML+SAF G E+T Y+ A+ YRF+S+GD L+
Sbjct: 286 IDLHAIDGMITNFHLPESTLIMLISAFYGYEKTMAAYKVAVEEKYRFFSFGDAMLIL 342
>gi|289434811|ref|YP_003464683.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289171055|emb|CBH27597.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 342
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 217/357 (60%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATG---EIKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGIKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEQQYRFFSFGDAMFI 341
>gi|125717594|ref|YP_001034727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK36]
gi|166218750|sp|A3CLX2|QUEA_STRSV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|125497511|gb|ABN44177.1| S-adenosylmethio nine:tRNA-ribosyltransferase-isomerase (queuine
synthetase), putative [Streptococcus sanguinis SK36]
Length = 342
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFSYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYNWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|319947352|ref|ZP_08021585.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus australis ATCC 700641]
gi|319746594|gb|EFV98854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus australis ATCC 700641]
Length = 342
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++++ + D + L DA+V
Sbjct: 1 MNTNDFDFHLPEELIAQTPLEKRDASKLLILNRQTG---QMEDQHFDAIINELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + + W V A+P+K +K+G ++ F
Sbjct: 58 MNNTRVLPARLHGVKP----DTGGHVELLLLKNIEGDQWEVLAKPAKRLKEGGVVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+I K G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLQATLIKKLEHGGCIVEFSYQGI-FLEVLESLGEMPLPPYIHEKLEDQ----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V++ D H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEDKGVHLVYLTLHVGLGTFRPVSVDNLDQHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ G RIV+VGTTS+R LET + +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAQTLRQVKASGHRIVAVGTTSIRTLETIGNKFNGELQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ VD +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 285 GYQWQVVDAFSTNFHLPKSTLVMLVSAFAGRELTLNAYQHAIDQGYRFFSFGDAMFI 341
>gi|222085994|ref|YP_002544526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium radiobacter K84]
gi|254764260|sp|B9JFA8|QUEA_AGRRK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221723442|gb|ACM26598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium radiobacter K84]
Length = 360
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 213/362 (58%), Positives = 261/362 (72%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV PN +V+SD + DL ++L DAIV
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPN--AEMVLSDRQIRDLSSYLRPGDAIV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR +P+ W +A+P K IK GD + F
Sbjct: 59 FNDTKVIPAQLEGIRHREGAP-GQQVSATLHMRAAPDRWKAFAKPGKRIKIGDRIQFGHG 117
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ L+A V +K GEI L F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 118 ENVCALGALDAVVEEKGEGGEITLRFDLSGPALDEAIAAVGHIPLPPYIAAKRPEDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +L + L ++G++ +FVTLHVGAGTF+PVK +DT+D
Sbjct: 178 ADYQTIYAREEGAVAAPTAGLHFTPSLFATLDAMGVERHFVTLHVGAGTFLPVKADDTED 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH EIG +DA TA+ LN+VK+RGGRIV VGTTSLRLLE+A EDG I PWSG T IFI
Sbjct: 238 HKMHFEIGHVDAATAEKLNAVKARGGRIVCVGTTSLRLLESAAAEDGTIKPWSGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRF+ VD+LM+NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SLL
Sbjct: 298 TPGYRFKTVDLLMTNFHLPRSTLFMLVSAFAGLDTMRAAYTHAIETGYRFYSYGDGSLLH 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|196044952|ref|ZP_03112186.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB108]
gi|225866399|ref|YP_002751777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB102]
gi|254764265|sp|C1ESW2|QUEA_BACC3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196024440|gb|EDX63113.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB108]
gi|225787051|gb|ACO27268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB102]
Length = 350
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFI 341
>gi|52081250|ref|YP_080041.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
licheniformis ATCC 14580]
gi|52786630|ref|YP_092459.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
licheniformis ATCC 14580]
gi|319644783|ref|ZP_07999016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. BT1B_CT2]
gi|81609021|sp|Q65GP8|QUEA_BACLD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52004461|gb|AAU24403.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus
licheniformis ATCC 14580]
gi|52349132|gb|AAU41766.1| QueA [Bacillus licheniformis ATCC 14580]
gi|317392592|gb|EFV73386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. BT1B_CT2]
Length = 342
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDFDLP IA P+ RD++RLMV+ I+ + FLN+ D IV
Sbjct: 1 MKVELFDFDLPERLIAQVPLKERDASRLMVLDKKTG---EITHSTFKHVIDFLNAGDCIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ L + + W +P+K +K+G +L F
Sbjct: 58 LNDTRVLPARLYGVK----EETGAKVEVLLLKQEEGDVWETLVKPAKRVKRGTVLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ G + F GI + +G +PLPPYI + Y
Sbjct: 111 -GDGRLTAVCTEELEHGGRKIEFRYEGI-FYEVLESLGEMPLPPYIKEQLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K QGS AAPTAGLHFT +L L G+ + F+TLHVG GTF PV E+ ++H M
Sbjct: 165 QTVYSKKQGSAAAPTAGLHFTEEILDALREKGVHIAFITLHVGLGTFRPVSAENVEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V+ GGRI+SVGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HAEFYEMSEETAALLNRVRQEGGRIISVGTTSTRTLETIASEHDGRFREASGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FRA+D +++NFHLPKS+L+MLVSA G E Y+ A+ H YRF+S+GD L+
Sbjct: 285 GYTFRAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRTAVEHEYRFFSFGDAMLI 341
>gi|327458690|gb|EGF05038.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1057]
Length = 342
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFSYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK++GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKAKGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|157150443|ref|YP_001450865.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gordonii str. Challis substr. CH1]
gi|157075237|gb|ABV09920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gordonii str. Challis substr. CH1]
Length = 342
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV + SD + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVDRSSG---EFSDQHFDSIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKPG----TGGHVELLLLKNTEGDQWEVLAKPAKRLKVGAQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVDELEHGGRIVRFDYQGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+++VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAATLREVKANGHRVIAVGTTSIRTLETIGNKFKGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ VD +NFHLPKSTL+MLVSAF G + T K Y+HAI+ YRF+S+GD +
Sbjct: 285 GYQWQIVDAFSTNFHLPKSTLVMLVSAFAGRDLTLKAYEHAIAERYRFFSFGDAMFI 341
>gi|23099489|ref|NP_692955.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Oceanobacillus iheyensis HTE831]
gi|38372491|sp|Q8EPQ8|QUEA_OCEIH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|22777718|dbj|BAC13990.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Oceanobacillus iheyensis HTE831]
Length = 342
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF LP IA P+ R S+RL V+ S I+ D+ +L + D +V
Sbjct: 1 MQIEDFDFHLPEELIAQTPLKDRTSSRLCVLDKQTS---EITHRSFKDITTYLQAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ + +I L + ++W V +P+K +K G + F
Sbjct: 58 LNDTKVLPARLYGVK----SDTGAKIEVLLLHQQEEDTWEVLVKPAKKVKVGTEIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+AT ID + G ++ FS +GI + +G +PLPPYI + + Y
Sbjct: 111 -GNGKLKATCIDLKDHGGRIMTFSYTGI-FYEILDQLGEMPLPPYIKEQ----LPEQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + ++G+ + FVTLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTDKLLEDIKAMGVNIVFVTLHVGLGTFRPVSVDSVEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + A+ LN K+ G RI+SVGTTS R LET DG G+T+IFI P
Sbjct: 225 HSEFYSMSESAAKTLNEAKAAGRRIISVGTTSTRTLETIVRDHDGKFVATRGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+FRA+D L++NFHLPKSTL+M++SA G E Y A+ YRF+S+GD L+
Sbjct: 285 PYKFRAIDGLITNFHLPKSTLIMMISALAGKEAILHAYNEAVKEEYRFFSFGDAMLIL 342
>gi|292670916|ref|ZP_06604342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
noxia ATCC 43541]
gi|292647537|gb|EFF65509.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
noxia ATCC 43541]
Length = 343
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 212/356 (59%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP +IA P PRDS+RLMV++P I H L FL D ++
Sbjct: 1 MDISDFDYDLPQEQIAQVPAEPRDSSRLMVLNPKERT---IQHHYFYQLEDFLKKGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R ++ L ++ N W V +P K + G ++ F +
Sbjct: 58 FNDTRVIPARLIGER----EHTGGKVEIFLLHQMDKNHWEVLVKPGKKARIGTVISFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +ID+ + G ++ F +G+ E + +GT+PLPPYI Y
Sbjct: 114 -----LSCEIIDRTDFGGRIVRFIYNGV-FEEILDRLGTMPLPPYIHETLED----RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y +++GS AAPTAGLHFT L+ RL G++ F+TLHVG GTF PV V+ +DH+M
Sbjct: 164 QTVYNRVKGSAAAPTAGLHFTEALMERLREKGVQFGFITLHVGLGTFRPVHVDVVEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA+ + + K G R++SVGTTS+R LE A GII SG+T+IFI PG
Sbjct: 224 HREFYSIPPETAELVQTAKKEGRRVISVGTTSIRTLEAAVASAGIIAAGSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD +++NFHLPKSTL+MLVSAF G + T + Y+ A+ YRF+S+GD ++
Sbjct: 284 YQFKVVDAVITNFHLPKSTLIMLVSAFAGRDFTLEAYRTAVEERYRFFSFGDAMMI 339
>gi|228960691|ref|ZP_04122335.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228798997|gb|EEM45970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 352
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 208/357 (58%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIK--ETLEDRDRYRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 167 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 227 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 287 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 343
>gi|328945507|gb|EGG39658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1087]
Length = 342
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F+ GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFAYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|327473324|gb|EGF18744.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK408]
Length = 342
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNIQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQISAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK++GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQILRQVKAKGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|260893432|ref|YP_003239529.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ammonifex
degensii KC4]
gi|260865573|gb|ACX52679.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ammonifex
degensii KC4]
Length = 343
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 202/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F++ LP IA P+ RD +RLMVV+ + L DLP +L D +V
Sbjct: 3 LKRSDFEYYLPKELIAQEPLPERDKSRLMVVYRDR---EEFEHRLFRDLPEYLVPGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+V+ A+L GV+ ++ L ++ P+ W V RP + + +G + F
Sbjct: 60 LNRTRVLPARLYGVK----EDTGGKVEVLLLRQLEPDLWEVLVRPGRRVPEGTRIVF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+ + +G L+ F+ G + + +G IPLPPYI RK + Y
Sbjct: 113 -GGGLLRGEVLSRLESGGRLVRFTYEG-DFFALLHQLGEIPLPPYIKRK----LAEPERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GS AAPTAGLHFT LL +L G++V +TLH+G TF PVK ED H M
Sbjct: 167 QTVYASEPGSAAAPTAGLHFTPELLQKLQEKGVEVVTLTLHIGLDTFRPVKEEDITAHRM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+A+N K G RIV+VGTT +R LE+ E G + GFT++FI PG
Sbjct: 227 HSEEYHLPEATAEAVNRAKEEGRRIVAVGTTVVRCLESVADERGRVRAGRGFTDLFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ VD L++NFHLP STLLMLV+AF G E+ + Y A+ YRF+S+GD L+
Sbjct: 287 YRFKVVDALVTNFHLPGSTLLMLVAAFAGREKILRAYAEAVRLRYRFFSFGDAMLIL 343
>gi|52696131|pdb|1VKY|A Chain A, Crystal Structure Of S-Adenosylmethionine Trna
Ribosyltransferase (Tm0574) From Thermotoga Maritima At
2.00 A Resolution
gi|52696132|pdb|1VKY|B Chain B, Crystal Structure Of S-Adenosylmethionine Trna
Ribosyltransferase (Tm0574) From Thermotoga Maritima At
2.00 A Resolution
Length = 347
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 191/357 (53%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 13 MKVSEFDYELPPELIAQEPVEPRDASRLMVLHRKTQ---RIEHRIFREIIEYLEPGDLLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W RP + +KKG L
Sbjct: 70 LNVSKVIPARLYARK-----KTGASIEILLIERLEEGIWKCLVRPGQKVKKGTELVI--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A + + G +L F L + G PLPPYI + Y
Sbjct: 122 --DEDLSAVCLGRGEDGTRILKFQPQDDRLIFEK---GRTPLPPYIK-----NEVPLERY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHFT L+ +L G++ V LHVG GTF PVKVE+ + H M
Sbjct: 172 QTVYAKEEGSVAAPTAGLHFTPELIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + T + L + RG RIV+VGTT++R LET + G T++FI P
Sbjct: 232 HEEFYQVPKETVRKLRETRERGNRIVAVGTTTVRTLETIARLP-EQEEYVGKTDLFIYPP 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 291 FEFKLVDALVTNFHLPRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLIL 347
>gi|93278505|pdb|1YY3|A Chain A, Structure Of S-Adenosylmethionine:trna Ribosyltransferase-
Isomerase (Quea)
gi|93278506|pdb|1YY3|B Chain B, Structure Of S-Adenosylmethionine:trna Ribosyltransferase-
Isomerase (Quea)
Length = 346
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
V FDF+LP IA P+ RD++RLMV+ + ++D + +F N D +V
Sbjct: 6 KVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFNEGDCLVL 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L G + ++ L + + + W A+P+K +KKG ++ F
Sbjct: 63 NNTRVLPARLFGTK----EDTGAKVELLLLKQETGDKWETLAKPAKRVKKGTVVTF---- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G RL+A ++ G + F GI + +G +PLPPYI + YQ
Sbjct: 115 GDGRLKAICTEELEHGGRKMEFQYDGI-FYEVLESLGEMPLPPYIKEQLDD----KERYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV ++ ++H MH
Sbjct: 170 TVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEEHNMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPG 300
+E + TA ALN V+ GGRI+SVGTTS R LET A DG SG+T+IFI PG
Sbjct: 230 AEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 290 YEFKAIDGMITNFHLPKSSLIMLVSALAGRENILRAYNHAVEEEYRFFSFGDAMLII 346
>gi|282882961|ref|ZP_06291565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus lacrimalis 315-B]
gi|281297168|gb|EFA89660.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus lacrimalis 315-B]
Length = 339
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 201/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P RD +RLM+++ I+ ++ +LN+ D +V
Sbjct: 1 MKTSDFSYDLPSELIAQHPAQKRDQSRLMLLNKKTG---EINHKKFYNIIDYLNNGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G R E L + ++W A+P K +K G + F +
Sbjct: 58 LNDTRVMPARIFGHRPEKDESIE-----ILLLNHKGDTWETLAKPGKKLKIGTEIIFSDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A V+D G L F SGI E + +G +PLPPYI K Y
Sbjct: 113 -----LKAQVVDISEDGSRFLKFIYSGI-FEEILDRLGEMPLPPYIQEKLED----KERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ GI++ F+TLHVG GTF PVKVED H M
Sbjct: 163 QTVYSKEIGSAAAPTAGLHFTKELLKKIEEKGIEICFITLHVGLGTFRPVKVEDVTKHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+ +N K G RIV+VGTTS+R LE+A+ + G + SG+T+IFI P
Sbjct: 223 HSEFYIIRDDVAKKINKAKDEGRRIVAVGTTSIRTLESASDDKGYVEAKSGWTDIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLP+STL+MLVS+ E Y A+ YRF+S+GD ++
Sbjct: 283 YKFKCVDALITNFHLPESTLIMLVSSLSTREIILNAYNVAVKEKYRFFSFGDAMFIY 339
>gi|116872960|ref|YP_849741.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|123461090|sp|A0AIY0|QUEA_LISW6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116741838|emb|CAK20962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 342
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSG---EIKDQHFTDILSYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGTKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGGTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GNGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
HSE + A +N +K+ GG++V+VGTTS+R LET + + G + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEDAANRINKIKATGGKVVAVGTTSIRTLETIASHNEGKLVAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++N HLPKSTL+MLVSA Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNLHLPKSTLIMLVSALSNRTNILAAYNHAVEQQYRFFSFGDAMFI 341
>gi|15643340|ref|NP_228384.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
maritima MSB8]
gi|7674170|sp|Q9WZ44|QUEA_THEMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|4981091|gb|AAD35659.1|AE001732_4 S-adenosylmethionine tRNA ribosyltransferase [Thermotoga maritima
MSB8]
Length = 335
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 191/357 (53%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 1 MKVSEFDYELPPELIAQEPVEPRDASRLMVLHRKTQ---RIEHRIFREIIEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W RP + +KKG L
Sbjct: 58 LNVSKVIPARLYARK-----KTGASIEILLIERLEEGIWKCLVRPGQKVKKGTELVI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A + + G +L F L + G PLPPYI + Y
Sbjct: 110 --DEDLSAVCLGRGEDGTRILKFQPQDDRLIFEK---GRTPLPPYIK-----NEVPLERY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHFT L+ +L G++ V LHVG GTF PVKVE+ + H M
Sbjct: 160 QTVYAKEEGSVAAPTAGLHFTPELIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + T + L + RG RIV+VGTT++R LET + G T++FI P
Sbjct: 220 HEEFYQVPKETVRKLRETRERGNRIVAVGTTTVRTLETIARLP-EQEEYVGKTDLFIYPP 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 279 FEFKLVDALVTNFHLPRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLIL 335
>gi|253574939|ref|ZP_04852279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. oral taxon 786 str. D14]
gi|251845985|gb|EES73993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. oral taxon 786 str. D14]
Length = 353
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 148/359 (41%), Positives = 206/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R ++RL+ ++ I H SD+ +L D +V
Sbjct: 12 MNVDLYDFELPEELIAQTPLAERTASRLLTLNKQTG---EIRHHKFSDILDYLQPGDTLV 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + L + + W +P K +K G ++ F +
Sbjct: 69 LNDTRVIPARLFGIK----EGTGAKAEVLLLKNLGEDRWEALVKPGKKLKTGSVIVFGDE 124
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV + + GE +L F+ GI + +G +PLPPYI K Y
Sbjct: 125 -----LRATVESEGDMGERVLRFAYEGI-FNEILDRLGQMPLPPYIKEKLDD----RERY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ + G+ + FVTLHVG GTF P+ V+ +DH+M
Sbjct: 175 QTVYSKHEGSAAAPTAGLHFTEELLEQVRAKGVTIAFVTLHVGLGTFRPMSVDRVEDHVM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H E + TA LN K+RGGR+++VGTTS R LET E G I SG+T IFI
Sbjct: 235 HEEYYVLPQETADVLNETKARGGRVIAVGTTSARTLETVAKQCEGGPIVKSSGWTGIFIY 294
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F VD L++NFHLPKSTL+MLVSA G E + YQ AI+ YRF+S+GD ++
Sbjct: 295 PGYQFGLVDALLTNFHLPKSTLVMLVSALAGRERILQAYQEAINLKYRFFSFGDAMFIY 353
>gi|154686913|ref|YP_001422074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens FZB42]
gi|166216699|sp|A7Z767|QUEA_BACA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154352764|gb|ABS74843.1| QueA [Bacillus amyloliquefaciens FZB42]
Length = 342
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 207/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ ++D ++ +F N D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLKERDASRLMVLDKQTGG---LTDSSFKEIVSFFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + ++W +P+K +KKG +L F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEENDTWETLVKPAKRVKKGTVLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ + G + F GI + +G +PLPPYI + Y
Sbjct: 111 -GDGRLTAVCTEELDHGGRKIEFRYDGI-FYEVLESLGEMPLPPYIKEQLDD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILDELKQKGVRIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA +LN V+ GGRIVSVGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYEMTEETAASLNEVRKAGGRIVSVGTTSTRTLETIAGEHDGEFTASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E Y+HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRHAVEEEYRFFSFGDAMLII 342
>gi|325697145|gb|EGD39032.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK160]
Length = 342
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ + G ++ F+ GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVDELDHGGRIVRFAYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|254418229|ref|ZP_05031953.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas sp. BAL3]
gi|196184406|gb|EDX79382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas sp. BAL3]
Length = 372
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 205/365 (56%), Positives = 244/365 (66%), Gaps = 12/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP RIALRP PRDSARL+VV + D ++ DLP FL DA+V
Sbjct: 7 MKTADFDFDLPEDRIALRPADPRDSARLLVV-----KDGALDDRIIRDLPDFLRPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L+GVR E + TLH R +P+ WS + +P K IK GD + F
Sbjct: 62 FNDTRVIPARLSGVRTRPGPEGETLTVAVEATLHHRDAPDVWSAFMKPGKRIKPGDRIRF 121
Query: 118 FSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ RL+ATV K + G I L F +SG L+ I VG +PLPPYIA KRP D
Sbjct: 122 GQEADAACDLGRLDATVTAKGDDGLITLKFDLSGPALDDAIRDVGVMPLPPYIAAKRPED 181
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT +A+ GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK +
Sbjct: 182 DRDRSDYQTVFAEHDGSVAAPTAGLHFTPALLDAIRARGVSTHAVTLHVGAGTFLPVKAD 241
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D DH MHSE G + TA ALN+V + GGRIV VGTTSLRLLE+ATTE G I P+ G T
Sbjct: 242 DLADHRMHSEWGEVSPETADALNAVHAAGGRIVCVGTTSLRLLESATTEAGEIRPFHGDT 301
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G K Y HAI+ YRFYSYGD
Sbjct: 302 AIFITPGYRFRAVDVLMTNFHLPKSTLFMLVSAFAGRAAMKTAYAHAIADGYRFYSYGDG 361
Query: 354 SLLFQ 358
SLLF+
Sbjct: 362 SLLFR 366
>gi|110633758|ref|YP_673966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mesorhizobium sp. BNC1]
gi|123057977|sp|Q11IH4|QUEA_MESSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110284742|gb|ABG62801.1| Queuosine biosynthesis protein [Chelativorans sp. BNC1]
Length = 358
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 204/362 (56%), Positives = 254/362 (70%), Gaps = 9/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSAR++VV P + D +V DLP FL DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPASPRDSARMLVVRPGK----PLEDCIVRDLPQFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L+G+R +I TLHMR P+ W + +P+K + G+ + F
Sbjct: 57 FNDTKVIPARLSGIRRRG--ETVAQIEATLHMRAGPDRWKAFLKPAKRVAVGERIQFGHD 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K GE LLVF SG L+ I+ G +PLPPYIA KRP D RD
Sbjct: 115 GESCFLGSLDATVAEKGEGGEALLVFDFSGPVLDEAIAAAGHVPLPPYIASKRPDDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +L S L +IG++ +FVTLHVGAGTF+PVK EDT+
Sbjct: 175 ADYQTIYAREEGAVAAPTAGLHFTPDLFSALDTIGVERHFVTLHVGAGTFLPVKAEDTEA 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G +D TA ALN+V++RGG I++VGTTSLRLLE+A G++ WSG T+IFI
Sbjct: 235 HRMHAEWGEVDGMTADALNAVRARGGCIIAVGTTSLRLLESAAEPSGLLKAWSGETDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRA+DILM+NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD+SLLF
Sbjct: 295 TPGYRFRAIDILMTNFHLPRSTLFMLVSAFSGLETMKSAYSHAIDQGYRFYSYGDSSLLF 354
Query: 358 QK 359
++
Sbjct: 355 RE 356
>gi|325694040|gb|EGD35958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK150]
Length = 342
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIADKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|300813231|ref|ZP_07093599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512684|gb|EFK39816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 339
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 200/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P RD +RLM+++ I+ ++ +LN+ D +V
Sbjct: 1 MKTSDFSYDLPSELIAQHPAQKRDQSRLMLLNKKTG---EINHKKFYNIIDYLNNGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G R E L + ++W A+P K +K G + F +
Sbjct: 58 LNDTRVMPARIFGHRPEKDESIE-----ILLLNHKGDTWETLAKPGKKLKIGTEIIFSDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A V+D G L F SGI E + +G +PLPPYI K Y
Sbjct: 113 -----LKAEVVDISEDGSRFLKFIYSGI-FEEILDRLGEMPLPPYIQEKLED----KERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ GI++ F+TLHVG GTF PVKVED H M
Sbjct: 163 QTVYSKEIGSAAAPTAGLHFTKELLKKIEEKGIEICFITLHVGLGTFRPVKVEDVTKHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I AQ +N K G RIV+VGTTS+R LE+A + G + SG+T+IFI P
Sbjct: 223 HSEFYIIRDDVAQKINKAKDEGRRIVAVGTTSIRTLESAADDKGYVKAKSGWTDIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLP+STL+MLVS+ E Y A+ YRF+S+GD ++
Sbjct: 283 YKFKCVDALITNFHLPESTLIMLVSSLSTREIILNAYNVAVKDKYRFFSFGDAMFIY 339
>gi|148269489|ref|YP_001243949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
petrophila RKU-1]
gi|170288163|ref|YP_001738401.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
sp. RQ2]
gi|281411793|ref|YP_003345872.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermotoga
naphthophila RKU-10]
gi|166218754|sp|A5IJK0|QUEA_THEP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238688813|sp|B1L8S0|QUEA_THESQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|147735033|gb|ABQ46373.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
petrophila RKU-1]
gi|170175666|gb|ACB08718.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
sp. RQ2]
gi|281372896|gb|ADA66458.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermotoga
naphthophila RKU-10]
Length = 335
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 190/357 (53%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 1 MKVSEFDYELPSELIAQEPVEPRDASRLMVLHRKTQ---RIEHRIFREIIEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W RP + +KKG L
Sbjct: 58 LNVSKVIPARLYARK-----KTGASIEILLIERLEEGIWKCLVRPGQKVKKGTELVI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A + + G +L F L + G PLPPYI + Y
Sbjct: 110 --DEDLSAVCLGRGEDGTRILKFQPQDDRLIFEK---GRTPLPPYIK-----NEVPLERY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHFT L+ +L G++ V LHVG GTF PVKVE+ + H M
Sbjct: 160 QTVYAKEEGSVAAPTAGLHFTPELIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + T + L + RG RIV+VGTT++R LET + G T++FI P
Sbjct: 220 HEEFYQVTKETIKKLRETRERGNRIVAVGTTTVRTLETIARLP-EQEEYVGKTDLFIYPP 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 279 FEFKLVDALITNFHLPRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLIL 335
>gi|228917055|ref|ZP_04080614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228842583|gb|EEM87672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 350
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGG---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYEGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|325688305|gb|EGD30324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK72]
Length = 342
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTKGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQILRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYNWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|17987172|ref|NP_539806.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. 16M]
gi|23501970|ref|NP_698097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis 1330]
gi|62290007|ref|YP_221800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 1 str. 9-941]
gi|82699935|ref|YP_414509.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis biovar Abortus 2308]
gi|148560477|ref|YP_001259016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ovis ATCC 25840]
gi|161619043|ref|YP_001592930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
canis ATCC 23365]
gi|163843359|ref|YP_001627763.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis ATCC 23445]
gi|189024248|ref|YP_001935016.1| Queuosine biosynthesis protein [Brucella abortus S19]
gi|237815515|ref|ZP_04594512.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus str. 2308 A]
gi|254689322|ref|ZP_05152576.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|254697454|ref|ZP_05159282.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|254701839|ref|ZP_05163667.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|254704384|ref|ZP_05166212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|254706720|ref|ZP_05168548.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|254710173|ref|ZP_05171984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|254714171|ref|ZP_05175982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|254717606|ref|ZP_05179417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|254730352|ref|ZP_05188930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|256031667|ref|ZP_05445281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|256044752|ref|ZP_05447656.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|256061179|ref|ZP_05451331.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|256113652|ref|ZP_05454463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|256159818|ref|ZP_05457555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|256255069|ref|ZP_05460605.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|256257569|ref|ZP_05463105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|256369519|ref|YP_003107029.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
microti CCM 4915]
gi|260546562|ref|ZP_05822301.1| queuosine biosynthesis protein [Brucella abortus NCTC 8038]
gi|260565646|ref|ZP_05836130.1| queuosine biosynthesis protein [Brucella melitensis bv. 1 str. 16M]
gi|260566370|ref|ZP_05836840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 4 str. 40]
gi|260754835|ref|ZP_05867183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|260758052|ref|ZP_05870400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|260761877|ref|ZP_05874220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|260883847|ref|ZP_05895461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|261219439|ref|ZP_05933720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|261222259|ref|ZP_05936540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|261314184|ref|ZP_05953381.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|261317727|ref|ZP_05956924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|261321935|ref|ZP_05961132.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|261325182|ref|ZP_05964379.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|261752398|ref|ZP_05996107.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|261755058|ref|ZP_05998767.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|265988758|ref|ZP_06101315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|265991173|ref|ZP_06103730.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|265995009|ref|ZP_06107566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|265998224|ref|ZP_06110781.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|294852432|ref|ZP_06793105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NVSL 07-0026]
gi|297248409|ref|ZP_06932127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 5 str. B3196]
gi|54038975|sp|P65949|QUEA_BRUSU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54041779|sp|P65948|QUEA_BRUME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|75496776|sp|Q57D45|QUEA_BRUAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207414|sp|Q2YPY7|QUEA_BRUA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216704|sp|A5VQL9|QUEA_BRUO2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038511|sp|A9M5A4|QUEA_BRUC2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038512|sp|B0CGP2|QUEA_BRUSI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238689369|sp|B2S5U5|QUEA_BRUA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|17982839|gb|AAL52070.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. 16M]
gi|23347918|gb|AAN30012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis 1330]
gi|62196139|gb|AAX74439.1| QueA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brucella abortus bv. 1 str. 9-941]
gi|82616036|emb|CAJ11072.1| Queuosine biosynthesis protein [Brucella melitensis biovar Abortus
2308]
gi|148371734|gb|ABQ61713.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ovis ATCC 25840]
gi|161335854|gb|ABX62159.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
canis ATCC 23365]
gi|163674082|gb|ABY38193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis ATCC 23445]
gi|189019820|gb|ACD72542.1| Queuosine biosynthesis protein [Brucella abortus S19]
gi|237788813|gb|EEP63024.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus str. 2308 A]
gi|255999681|gb|ACU48080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
microti CCM 4915]
gi|260095612|gb|EEW79489.1| queuosine biosynthesis protein [Brucella abortus NCTC 8038]
gi|260151714|gb|EEW86808.1| queuosine biosynthesis protein [Brucella melitensis bv. 1 str. 16M]
gi|260155888|gb|EEW90968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 4 str. 40]
gi|260668370|gb|EEX55310.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|260672309|gb|EEX59130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|260674943|gb|EEX61764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|260873375|gb|EEX80444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|260920843|gb|EEX87496.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|260924528|gb|EEX91096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|261294625|gb|EEX98121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|261296950|gb|EEY00447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|261301162|gb|EEY04659.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|261303210|gb|EEY06707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|261742151|gb|EEY30077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|261744811|gb|EEY32737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|262552692|gb|EEZ08682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|262766122|gb|EEZ11911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|263001957|gb|EEZ14532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|264660955|gb|EEZ31216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|294821021|gb|EFG38020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NVSL 07-0026]
gi|297175578|gb|EFH34925.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 5 str. B3196]
Length = 363
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 209/361 (57%), Positives = 257/361 (71%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPG----EPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|222099065|ref|YP_002533633.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
neapolitana DSM 4359]
gi|221571455|gb|ACM22267.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
neapolitana DSM 4359]
Length = 337
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 138/357 (38%), Positives = 197/357 (55%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 3 MKVSEFDYELPPELIAQEPVEPRDASRLMVLHRKT---KKIEHRIFREIVEYLEPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W +P + +KKG L
Sbjct: 60 LNVSKVIPARLYAKK-----KTGAHIEILLLDRLEEGIWRCLVKPGQKVKKGTELLI--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A +D+ G +L F +L + G PLPPYI ++ P+D Y
Sbjct: 112 --DNNLSAVCLDRSEDGTRILEFRPKNDDLILKK---GKAPLPPYIKKEVPLD-----RY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT L+ +L G++ + LHVG GTF PVKVE+ + H M
Sbjct: 162 QTVYAKENGSVAAPTAGLHFTPELIEKLKEKGVEFAEIVLHVGIGTFRPVKVEEVEKHRM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + + + K +G R+V+VGTT++R LET ++G T++FI P
Sbjct: 222 HEEYYRVPREAVRKIRETKEKGKRVVAVGTTTVRTLETIARLP-EQEEYAGKTDLFIYPP 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 281 FEFKMVDALITNFHLPRSTLLMLVAAFAGKDFIMEAYREAVKRRYRFFSFGDAMLIL 337
>gi|315221824|ref|ZP_07863736.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus F0211]
gi|315189057|gb|EFU22760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus F0211]
Length = 342
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV+ + D + LN DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVNHETG---QMEDTHFDAIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L ++ + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEKP----ETGGHVELLLLKNIAGDDWEVLAKPAKRLKVGAAISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G + F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVLEELEHGGRTVRFHYQGI-FLEVLESLGEMPLPPYIHEKLKD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAANTLRQVKASGHRVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLSAYQHAIDEKYRFFSFGDAMFI 341
>gi|325690109|gb|EGD32113.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK115]
Length = 343
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 2 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 59 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI + +G +PLPPYI K Y
Sbjct: 112 -GDGRLTATVVEELDHGGRIVRFGYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 226 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T K Y+HAI+ YRF+S+GD +
Sbjct: 286 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLKAYEHAIAERYRFFSFGDAMFI 342
>gi|254719159|ref|ZP_05180970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|265984153|ref|ZP_06096888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|306838150|ref|ZP_07471006.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NF 2653]
gi|264662745|gb|EEZ33006.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|306406740|gb|EFM62963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NF 2653]
Length = 363
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 210/361 (58%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPG----QPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDGI+ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGIVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|323352665|ref|ZP_08087635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis VMC66]
gi|322121701|gb|EFX93447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis VMC66]
Length = 342
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ G R+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGDRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|254562239|ref|YP_003069334.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium extorquens DM4]
gi|254269517|emb|CAX25483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
DM4]
Length = 368
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 195/364 (53%), Positives = 255/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P ++D V DLP+ L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG----DPLADRGVRDLPSLLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRHRAGGS-GQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KR DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRATDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|163852486|ref|YP_001640529.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium extorquens PA1]
gi|226713844|sp|A9VX03|QUEA_METEP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|163664091|gb|ABY31458.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium extorquens PA1]
Length = 368
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 196/364 (53%), Positives = 256/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P ++D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG----DPLADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRHRAGGS-GQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KRP DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRPTDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+ H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 EAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|188582509|ref|YP_001925954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium populi BJ001]
gi|238692892|sp|B1ZIL2|QUEA_METPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|179346007|gb|ACB81419.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium populi BJ001]
Length = 366
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 196/369 (53%), Positives = 256/369 (69%), Gaps = 14/369 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P ++D V DLPA LN DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG----ETLADRGVRDLPALLNPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F +
Sbjct: 57 FNDTRVIPARLSGIRHRAGG-TGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGGE 115
Query: 121 DGQ---------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
S L+ATV ++ GEILL F ++G L+ I+ +G +PLPPYIA KR
Sbjct: 116 GANQGASEVCVLSGLDATVEERGEGGEILLRFDLAGPALDEAIAGLGALPLPPYIAGKRA 175
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
DARD DYQT YA+ G+VAAPTAGLHF+ LL + + GI+ VTLHVGAGTF+PVK
Sbjct: 176 TDARDTTDYQTVYAREPGAVAAPTAGLHFSDALLDGIDAAGIERIHVTLHVGAGTFLPVK 235
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+DT+ H MH+EIG +D TA+ LN+V++RG RIV+VGTT+LRLLE+AT DG + P+SG
Sbjct: 236 ADDTEAHRMHAEIGILDTATAERLNAVRARGNRIVAVGTTALRLLESATDPDGTVRPFSG 295
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI+ YRFYSYG
Sbjct: 296 ATDIFITPGYRFRAVDALVTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIASGYRFYSYG 355
Query: 352 DTSLLFQKR 360
D SLLF +R
Sbjct: 356 DASLLFPER 364
>gi|306841819|ref|ZP_07474502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO2]
gi|306288100|gb|EFM59494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO2]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 209/361 (57%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPG----QPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGSISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDGI+ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGIVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|262283157|ref|ZP_06060924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. 2_1_36FAA]
gi|262261409|gb|EEY80108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. 2_1_36FAA]
Length = 342
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL++V + SD + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLIVDRSSG---EFSDQHFDSIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKPG----TGGHVELLLLKNIEGDHWEVLAKPAKRLKVGAQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELEHGGRIVRFDYQGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+++VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAATLREVKANGHRVIAVGTTSIRTLETIGNKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ VD +NFHLPKSTL+MLVSAF G + T K Y+HAI+ YRF+S+GD +
Sbjct: 285 GYQWQIVDAFSTNFHLPKSTLVMLVSAFAGRDLTLKAYEHAIAERYRFFSFGDAMFI 341
>gi|30264488|ref|NP_846865.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Ames]
gi|42783549|ref|NP_980796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10987]
gi|47529946|ref|YP_021295.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. 'Ames Ancestor']
gi|47566608|ref|ZP_00237430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9241]
gi|49187308|ref|YP_030560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Sterne]
gi|49481504|ref|YP_038468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|165871981|ref|ZP_02216622.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0488]
gi|167640749|ref|ZP_02399009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0193]
gi|170688656|ref|ZP_02879861.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0465]
gi|177653957|ref|ZP_02935998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0174]
gi|190566984|ref|ZP_03019900.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis Tsiankovskii-I]
gi|196034446|ref|ZP_03101855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus W]
gi|196039272|ref|ZP_03106578.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus NVH0597-99]
gi|206976063|ref|ZP_03236973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus H3081.97]
gi|217961909|ref|YP_002340479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH187]
gi|218905613|ref|YP_002453447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH820]
gi|227817196|ref|YP_002817205.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CDC 684]
gi|228929463|ref|ZP_04092484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228935738|ref|ZP_04098551.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228948132|ref|ZP_04110416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228987671|ref|ZP_04147783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229123959|ref|ZP_04253151.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 95/8201]
gi|229141157|ref|ZP_04269698.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST26]
gi|229158033|ref|ZP_04286104.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 4342]
gi|229602726|ref|YP_002868704.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0248]
gi|254684173|ref|ZP_05148033.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CNEVA-9066]
gi|254736520|ref|ZP_05194226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Western North America USA6153]
gi|254741558|ref|ZP_05199245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Kruger B]
gi|254751343|ref|ZP_05203380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Vollum]
gi|254757675|ref|ZP_05209702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Australia 94]
gi|301055926|ref|YP_003794137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis CI]
gi|38372450|sp|Q81LH1|QUEA_BACAN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81568824|sp|Q730B3|QUEA_BACC1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81613565|sp|Q6HDA8|QUEA_BACHK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736730|sp|B7JQ04|QUEA_BACC0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736733|sp|B7HQH7|QUEA_BACC7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764263|sp|C3P9A5|QUEA_BACAA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764264|sp|C3L6U7|QUEA_BACAC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|30259146|gb|AAP28351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Ames]
gi|42739478|gb|AAS43404.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10987]
gi|47505094|gb|AAT33770.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. 'Ames Ancestor']
gi|47556638|gb|EAL14970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9241]
gi|49181235|gb|AAT56611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Sterne]
gi|49333060|gb|AAT63706.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|164712271|gb|EDR17807.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0488]
gi|167511321|gb|EDR86707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0193]
gi|170667342|gb|EDT18100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0465]
gi|172081012|gb|EDT66090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0174]
gi|190561975|gb|EDV15944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis Tsiankovskii-I]
gi|195992988|gb|EDX56947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus W]
gi|196029899|gb|EDX68500.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus NVH0597-99]
gi|206745815|gb|EDZ57212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus H3081.97]
gi|217063781|gb|ACJ78031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH187]
gi|218540066|gb|ACK92464.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH820]
gi|227005653|gb|ACP15396.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CDC 684]
gi|228625486|gb|EEK82242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 4342]
gi|228642320|gb|EEK98610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST26]
gi|228659261|gb|EEL14909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 95/8201]
gi|228772056|gb|EEM20510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228811490|gb|EEM57827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228823976|gb|EEM69795.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228830251|gb|EEM75867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|229267134|gb|ACQ48771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0248]
gi|300378095|gb|ADK06999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus biovar anthracis str. CI]
Length = 350
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|329769851|ref|ZP_08261250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
sanguinis M325]
gi|328837905|gb|EGF87529.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
sanguinis M325]
Length = 342
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 207/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFDF LP IA P+ RD+++L+ ++ + SD+ + N D +V
Sbjct: 1 MKLEEFDFYLPEELIAQTPLLKRDTSKLLTINRK---ENTYEHKVFSDIIDYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L N W +P+K IK G I+ F
Sbjct: 58 LNNTRVMPARLYGQK----KDTGAAIEVLLLKNKEHNMWECLVKPAKRIKVGSIVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +EA + + G F GI + ++ +GT+PLPPYI + Y
Sbjct: 111 -GDGIMEAECVKVLDDGFRYFEFKYEGI-FQERLDELGTMPLPPYIKERLTD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ G+ + ++TLHVG GTF PV VE+ +DH M
Sbjct: 165 QTVYSKEVGSSAAPTAGLHFTNELLDKIKQKGVNIVYLTLHVGLGTFRPVSVENIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE +D TA +N K GGR+ SVGTTS R LET A DG I P SG+TNIFI P
Sbjct: 225 HSEYYTLDEETANVINETKKNGGRVFSVGTTSTRTLETIARDNDGEIVPASGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+ F+ VD L++NFHLPKS+L+MLVSAF E+ ++Y+ A+ + YRF+S+GD ++
Sbjct: 285 GFEFKCVDGLITNFHLPKSSLIMLVSAFYNREKVLELYKIAVENKYRFFSFGDAMIII 342
>gi|229186657|ref|ZP_04313818.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BGSC 6E1]
gi|228596916|gb|EEK54575.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BGSC 6E1]
Length = 350
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|327461604|gb|EGF07935.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1]
gi|327489463|gb|EGF21256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1058]
Length = 342
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ F+ GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFAYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKGNGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAEHYRFFSFGDAMFI 341
>gi|308174473|ref|YP_003921178.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens DSM 7]
gi|307607337|emb|CBI43708.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens DSM 7]
gi|328554393|gb|AEB24885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens TA208]
gi|328912798|gb|AEB64394.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens LL3]
Length = 342
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 207/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ ++D ++ +F D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLKERDASRLMVLDKQTGG---LTDSSFKEIVSFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + ++W +P+K ++KG IL F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEENDTWETLVKPAKRVRKGTILTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ + G + F GI + +G +PLPPYI + Y
Sbjct: 111 -GDGRLTAVCTEELDHGGRKIKFRYDGI-FYEVLESLGEMPLPPYIKEQLDD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILDELKQKGVRIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA +LN V+ GGRIVSVGTTS R LET A DG+ SG+T+IFI P
Sbjct: 225 HAEFYEMTEETAASLNEVRKAGGRIVSVGTTSTRTLETIAGEHDGVFTASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E Y+HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRHAVEEEYRFFSFGDAMLII 342
>gi|65321784|ref|ZP_00394743.1| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase) [Bacillus anthracis str. A2012]
Length = 354
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|229146989|ref|ZP_04275351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST24]
gi|228636486|gb|EEK92954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST24]
Length = 350
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|118479574|ref|YP_896725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis str. Al Hakam]
gi|118418799|gb|ABK87218.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis str. Al Hakam]
Length = 354
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|52141088|ref|YP_085741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus E33L]
gi|81686089|sp|Q634C6|QUEA_BACCZ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51974557|gb|AAU16107.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus cereus E33L]
Length = 350
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLQGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|257066399|ref|YP_003152655.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus prevotii DSM 20548]
gi|256798279|gb|ACV28934.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaerococcus prevotii DSM 20548]
Length = 340
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 204/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +EFD++LP S IA P RD AR+M++ + I D D+ +L D +V
Sbjct: 1 MRTEEFDYELPESLIAQHPSDKRDEARMMLLDKSTGD---IEDKHFFDIIDYLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R +++ I L + W V RP K +K G + F +
Sbjct: 58 MNDTRVIPARLFGHR----EGKDESIEVFLLHNIKGKKWEVLVRPGKKMKIGVEVIFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A VID G ++ F+ GI + +G +PLPPYI K +Y
Sbjct: 114 -----LKAKVIDIKEDGNRVVEFTYEGI-FNEILDKLGNMPLPPYIKEKLKD----PEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ GIK+ F+TL+VG GTF PV +D DH M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEEKGIKLAFLTLNVGLGTFRPVNEDDITDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K G R+++VGTTS+R LE+ + G I SG+T+IFI PG
Sbjct: 224 HSEFYTISQETADIINQAKREGNRVIAVGTTSIRTLESVYKKCGKIQEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++ VD +++NFHLPKSTL+MLV+AF + Y++A+ YRF+S+GD +
Sbjct: 284 FEYKVVDAIITNFHLPKSTLIMLVAAFTSKKIILNAYEYAVKEKYRFFSFGDCMFI 339
>gi|295100843|emb|CBK98388.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii L2-6]
Length = 342
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 199/357 (55%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV+ I + DLP +L D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPASPRDAARLMVL---SQKDDSIQHRIFHDLPEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A++ G++ L +V + W A+P K ++ G + F
Sbjct: 58 VNNSKVLPARIVGIK----QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V + G + F L ++ G +PLPPYI ++ ++ Y
Sbjct: 111 -GDGSLTAIVDETLEDGNKFVTFYYDTETLYEKLDEFGKMPLPPYITKQLDDQSQ----Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ + + G+ + VTLHVG GTF PV+ ++ DH M
Sbjct: 166 QTVYAKELGSAAAPTAGLHFTPELMDTIRAKGVNITEVTLHVGLGTFRPVQEDEITDHKM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ ++ K+ G R+++VGTTS R LE + G I SG T+IF+ PG
Sbjct: 226 HSEWYSVSEETAKLIHDTKAAGHRVIAVGTTSCRTLEAVAAKYGEIKACSGNTDIFLYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F +D L++NFHLP+STL+MLVSA G E+T Y+ A+ YRF+S+GD L+
Sbjct: 286 VKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMAAYKVAVEQKYRFFSFGDAMLIL 342
>gi|228902946|ref|ZP_04067087.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 4222]
gi|228967494|ref|ZP_04128522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228792209|gb|EEM39783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228856730|gb|EEN01249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 4222]
Length = 350
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|229198546|ref|ZP_04325249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1293]
gi|228584931|gb|EEK43046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1293]
gi|324328321|gb|ADY23581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 350
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V+ GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVRENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|30022493|ref|NP_834124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 14579]
gi|229129698|ref|ZP_04258666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-Cer4]
gi|38372443|sp|Q817W5|QUEA_BACCR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|29898051|gb|AAP11325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 14579]
gi|228653815|gb|EEL09685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-Cer4]
Length = 350
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKQNGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|224476737|ref|YP_002634343.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus carnosus subsp. carnosus TM300]
gi|222421344|emb|CAL28158.1| putative S-adenosylmethionine tRNA ribosyltransferase
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 341
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 212/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP IA P+ RD++RL+V+H + D+ ++NS D +V
Sbjct: 1 MNIEEFDYDLPEELIAQTPLKDRDTSRLLVLHKENG---ELEHRHFKDIIEYINSGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ + ++ + ++ + W V +P+K IK G L F
Sbjct: 58 LNDTKVMPARLFGVK----QETKAKVEMLMLTQIEGDDWEVLLKPAKRIKVGQKLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++EA I++ + G ++ S GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GEGKIEAECIEELDQGGRIMRLSYEGI-LQERLDELGEMPLPPYIKERLEDQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKATGSAAAPTAGLHFTDELLDELKAKGVNLAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNQTKQNGKRIISVGTTSTRTLETIRRDYDTFTAASGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSRQYILNAYRTAVEMKYRFFSFGDAMLII 341
>gi|70726282|ref|YP_253196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus haemolyticus JCSC1435]
gi|91207406|sp|Q4L6Y5|QUEA_STAHJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|68447006|dbj|BAE04590.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
haemolyticus JCSC1435]
Length = 341
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 210/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+DLP S IA P+ RD +RL+V+ N I D+ +L + D +V
Sbjct: 1 MNVEEFDYDLPESLIAQTPLKDRDQSRLLVLGRNSGN---IEHKHFKDVINYLETGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + R+ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTRIENNDWEVLLKPAKRIKVGNKLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I++ + G ++ GI LE +++ +G +PLPPYI + Y
Sbjct: 111 -GEGKIIAECIEELDQGGRIMRLHYEGI-LEERLNELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + GI + F+TLHVG GTF PV VED +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLDEIRAKGINIAFITLHVGLGTFRPVSVEDINDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETANLLNQTKKEGHRIISVGTTSTRTLETIRRDYNEFVAVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+
Sbjct: 285 FTYKAIDGLITNFHLPKSTLVMLVSAFSSRENILNAYKEAVKLEYRFFSFGDAMLII 341
>gi|322385861|ref|ZP_08059504.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus cristatus ATCC 51100]
gi|321270146|gb|EFX53063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus cristatus ATCC 51100]
Length = 342
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RDS+RL++V SD ++ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDSSRLLIVDRETG---QFSDQHFDNIIDQLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGTKP----ETGGHVELLLLKNTQGDFWEVLAKPAKRLRVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVTEELEHGGRIVRFDYQGI-FLEVLESLGEMPLPPYIHEKLED----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLDKIAAKGVKLVYLTLHVGLGTFRPVSVDNLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ L VK+ G RI++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAETLRQVKASGHRIIAVGTTSIRTLETIGSKFEGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ VD +NFHLPKSTL+MLVSAF G + T + Y++AI+ YRF+S+GD +
Sbjct: 285 GYQWKIVDAFSTNFHLPKSTLVMLVSAFAGRQLTLEAYEYAIAERYRFFSFGDAMFI 341
>gi|218531243|ref|YP_002422059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium chloromethanicum CM4]
gi|254764283|sp|B7KTS1|QUEA_METC4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218523546|gb|ACK84131.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacterium chloromethanicum CM4]
Length = 368
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 197/364 (54%), Positives = 256/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P ++D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG----DPLADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRHRAGGS-GQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KRP DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRPTDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|322389159|ref|ZP_08062720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 903]
gi|321144064|gb|EFX39481.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 903]
Length = 342
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTG---QFQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVKP----ETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVRFHYQGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD +
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGDAMFI 341
>gi|240139823|ref|YP_002964300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
AM1]
gi|240009797|gb|ACS41023.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
AM1]
Length = 368
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 196/364 (53%), Positives = 255/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P ++D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG----DPLADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRHRAGGS-GQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KR DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRATDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|327193336|gb|EGE60240.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CNPAF512]
Length = 366
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 217/365 (59%), Positives = 261/365 (71%), Gaps = 7/365 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLS---CPLVISDHLVSDLPAFLNSND 57
M V FDFDLP RIALRP PRDSARL+VV+P+ +SDH V DLP+FL + D
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESVHAESALSDHHVYDLPSFLRAGD 60
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
A+VFN+TKVI AQL G+R +++S TLHMR+ PN W +A+P K IK+GD + F
Sbjct: 61 ALVFNDTKVIPAQLEGIRHRDGA-GGQQVSATLHMRIGPNRWKAFAKPGKRIKEGDRIAF 119
Query: 118 FSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L+ATV +K GE+ L F ++G LE I+ VG IPLPPYIA KRP D
Sbjct: 120 GHSGESCFLGSLDATVEEKGEAGEVTLAFDLTGPALEEAIAAVGHIPLPPYIAAKRPEDE 179
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
RD DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGTF+PVK +D
Sbjct: 180 RDRADYQTIYAREEGAVAAPTAGLHFTPDLFAALDKAGIERHFVTLHVGAGTFLPVKADD 239
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
TDDH MH E G++ A A LN+VK+RGGRIV VGTTSLRLLE+A EDG I PW+G T
Sbjct: 240 TDDHKMHLESGYVSAEIAARLNAVKARGGRIVCVGTTSLRLLESAAGEDGKIKPWAGATG 299
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD S
Sbjct: 300 IFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYEHAISTGYRFYSYGDAS 359
Query: 355 LLFQK 359
LLF+K
Sbjct: 360 LLFRK 364
>gi|312867272|ref|ZP_07727482.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis F0405]
gi|311097401|gb|EFQ55635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis F0405]
Length = 342
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTG---QFQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVKP----ETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVHFHYQGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD +
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGDAMFI 341
>gi|218236041|ref|YP_002369227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus B4264]
gi|228910254|ref|ZP_04074072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 200]
gi|229048127|ref|ZP_04193698.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH676]
gi|229111890|ref|ZP_04241436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-15]
gi|296504909|ref|YP_003666609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis BMB171]
gi|226736732|sp|B7HE52|QUEA_BACC4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218163998|gb|ACK63990.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus B4264]
gi|228671646|gb|EEL26944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-15]
gi|228723230|gb|EEL74604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH676]
gi|228849418|gb|EEM94254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 200]
gi|296325961|gb|ADH08889.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis BMB171]
Length = 350
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|296876827|ref|ZP_06900875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 15912]
gi|296432329|gb|EFH18128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 15912]
Length = 342
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTG---KFQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVKP----ETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVRFHYQGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD +
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGDAMFI 341
>gi|229032069|ref|ZP_04188051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1271]
gi|228729261|gb|EEL80256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1271]
Length = 350
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKESGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|307317196|ref|ZP_07596637.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti AK83]
gi|306897284|gb|EFN28029.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti AK83]
Length = 360
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 215/362 (59%), Positives = 258/362 (71%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD--GAPVLEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR+ + +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRYRGEDISTP-VSLTLHMRVAPSRWKAFARPARRLKPGDRISFGHG 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D RD
Sbjct: 118 GNACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +DT D
Sbjct: 178 TDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKADDTAD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T IFI
Sbjct: 238 HVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+SLLF
Sbjct: 298 TPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDSSLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|218899587|ref|YP_002447998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9842]
gi|226736731|sp|B7IIT0|QUEA_BACC2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218545497|gb|ACK97891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9842]
Length = 350
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|225848048|ref|YP_002728211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643657|gb|ACN98707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 336
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 133/357 (37%), Positives = 186/357 (52%), Gaps = 21/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA PV PRDS RLMV++ I + D+ +L D +V
Sbjct: 1 MKLSDFDYHLPKELIAKYPVEPRDSCRLMVLNREKKS---IEHRVFRDIVDYLQEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + I L V N W + + +K D +
Sbjct: 58 LNDTKVIPARLIGKK----EKTGANIEVFLLKPVEDNIWEALIKNVRRLKPKDKIVVAQD 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ E ++ + +++ + G IPLPPYI RP + +D Y
Sbjct: 114 --------FFVEFLERQEDKVIVKLHSKDIKEDLEKYGHIPLPPYIE--RPDEEKDKQLY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GSVA+PTAGLHFT LL ++ G+ + ++TLHVG GTF PVK ED H M
Sbjct: 164 QTVFAKKEGSVASPTAGLHFTEELLKKVKDKGVNITYITLHVGLGTFKPVKEEDITKHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I + + K G +++VGTT +R LE+ GFT+IFI P
Sbjct: 224 HEEFYSIPKESLDLIEKTKESGKSVIAVGTTVVRTLESFVLTGKT----EGFTDIFIYPP 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLPKSTLLMLVSAF + K Y A+ YRF+SYGD +
Sbjct: 280 FEFKIVDKLITNFHLPKSTLLMLVSAFASKDFILKAYNEAVKQKYRFFSYGDAMFII 336
>gi|229013635|ref|ZP_04170766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides DSM 2048]
gi|228747694|gb|EEL97566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides DSM 2048]
Length = 354
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFTDILSYLQEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET T++ G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDNSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|254724656|ref|ZP_05186439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A1055]
Length = 350
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYGKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|55820620|ref|YP_139062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMG 18311]
gi|81560864|sp|Q5M5E8|QUEA_STRT2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|55736605|gb|AAV60247.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMG 18311]
Length = 347
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 156/359 (43%), Positives = 213/359 (59%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVTR---EMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ FS +GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVTEELDHGGRIVEFSYNGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYTLSQEAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY+F VD +NFHLPKSTL+MLVSAF G E + Y+HAI YRF+S+GD + +
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAIQERYRFFSFGDAMFVTR 343
>gi|197104869|ref|YP_002130246.1| S-adenosylmethionine tRNA ribosyltransferase [Phenylobacterium
zucineum HLK1]
gi|238690135|sp|B4R9Q3|QUEA_PHEZH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196478289|gb|ACG77817.1| S-adenosylmethionine tRNA ribosyltransferase [Phenylobacterium
zucineum HLK1]
Length = 357
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 190/362 (52%), Positives = 239/362 (66%), Gaps = 10/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IALRP PRD+ARL++V P D V DLP L + D +V
Sbjct: 1 MKLADFDFDLPEEAIALRPANPRDAARLLLVEPGQD----FRDLAVRDLPGLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L GVR +R + TLH R + + W+ + RP K + GD + F
Sbjct: 57 LNDTRVIPARLKGVRTREGSRV--AVEATLHQRKAGHVWTAFMRPGKRLAPGDRVSFGET 114
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D + L+ATV +K GE+ L F +SG +L+ I+ G +PLPPYIA KR D +D
Sbjct: 115 DDRACFLGALDATVKEKGEGGEVTLAFDLSGPDLDAAIAERGAMPLPPYIAAKRAEDEQD 174
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ GSVAAPTAGLHFT LL+RL G+ VTLHVGAGTF+PVK ED
Sbjct: 175 RADYQTVYAEEDGSVAAPTAGLHFTPELLARLAQAGVTTERVTLHVGAGTFLPVKTEDIS 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G +DA TA LN+ ++ GGRIV VGTTSLRLLE+A EDG++ P+ T IF
Sbjct: 235 EHRMHAEWGEVDAATADRLNAARAAGGRIVCVGTTSLRLLESAAGEDGVVRPFRDETAIF 294
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRA D LM+NFHLPKSTL MLV AF G + + Y+HAI YRFYSYGD+SLL
Sbjct: 295 ITPGYRFRAADGLMTNFHLPKSTLFMLVCAFAGTDTMRAAYRHAIETGYRFYSYGDSSLL 354
Query: 357 FQ 358
++
Sbjct: 355 WR 356
>gi|15965338|ref|NP_385691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium meliloti 1021]
gi|21263893|sp|Q92PY5|QUEA_RHIME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|15074518|emb|CAC46164.1| Probable S-adenosylmethionine:tRNA
ribosyltransferase-isomerase(queuosine biosynthesis
protein QueA) [Sinorhizobium meliloti 1021]
Length = 360
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 215/362 (59%), Positives = 258/362 (71%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD--GAPVLEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR+ + +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRYRGEDISTP-VSLTLHMRVAPSRWKAFARPARRLKPGDRISFGHG 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D RD
Sbjct: 118 GSACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +DT D
Sbjct: 178 TDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKADDTAD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T IFI
Sbjct: 238 HVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+SLLF
Sbjct: 298 TPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDSSLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|159184871|ref|NP_354665.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium tumefaciens str. C58]
gi|22096020|sp|Q8UES7|QUEA_AGRT5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|159140152|gb|AAK87450.2| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Agrobacterium tumefaciens str. C58]
Length = 366
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 223/369 (60%), Positives = 262/369 (71%), Gaps = 14/369 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRDSARL+VV PN + DH V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPEENIALRPANPRDSARLLVVDPN---ENRMEDHRVFDLPSFLRPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL GVR E +S TLHMR + W +ARP K IK+GD + F
Sbjct: 58 FNDTRVIPAQLEGVRLREGAP-ETAVSATLHMRADQSRWKAFARPGKRIKEGDRIRFGYD 116
Query: 121 D----------GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
G + LEATV +K GEI L+F ISG L+ I+ VG IPLPPYIA KR
Sbjct: 117 RDTVNSSSGACGLAHLEATVEEKGEEGEITLLFDISGPVLDEAIASVGHIPLPPYIAAKR 176
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P D +D DYQT YA+ +G+VAAPTAGLHFT +L L S GI+ +FVTLHVGAGTF+PV
Sbjct: 177 PEDQQDQTDYQTIYAREKGAVAAPTAGLHFTPDLFEALDSAGIERHFVTLHVGAGTFLPV 236
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
K +DTDDH MH EIG++ TA LN+VK+RGGRIV VGTTSLRL+E+A TEDG I+PWS
Sbjct: 237 KSDDTDDHKMHFEIGYVSQETADRLNAVKARGGRIVCVGTTSLRLIESAATEDGTIHPWS 296
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAFCG+E + Y+HAI YRFYSY
Sbjct: 297 DATGIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFCGLETMRDAYRHAIETGYRFYSY 356
Query: 351 GDTSLLFQK 359
GD+SLLF+K
Sbjct: 357 GDSSLLFRK 365
>gi|306843960|ref|ZP_07476555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO1]
gi|306275715|gb|EFM57439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO1]
Length = 363
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 208/361 (57%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ + P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHIRPG----QPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+A+ EDGI+ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESASGEDGIVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADDYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|324995358|gb|EGC27270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK678]
Length = 342
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTKGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKVNGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIRP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYNWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|228954702|ref|ZP_04116725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228805029|gb|EEM51625.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 350
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|229175092|ref|ZP_04302609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus MM3]
gi|228608388|gb|EEK65693.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus MM3]
Length = 350
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRHLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|163790793|ref|ZP_02185219.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. AT7]
gi|159873973|gb|EDP68051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. AT7]
Length = 343
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 147/355 (41%), Positives = 210/355 (59%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
K+FDFDLP IA P+ R S++L+++ + D +D+ L+ DA+V N
Sbjct: 4 TKDFDFDLPEELIAQTPLENRSSSKLLILDKETG---KVEDKHFTDILDELHEGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+L+G++ I L + W +P+K G+++ F G
Sbjct: 61 DTRVLPARLHGIK----TETGAHIEILLLKNTENDRWETLVKPAKKATVGNVISF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL ATV ++ G ++ FS GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLTATVKEELTHGGRIIDFSYEGI-FLEVLESLGEMPLPPYIKERLEDS----ERYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL ++ + G+++ F+TLHVG GTF PV V+ +DH MHS
Sbjct: 168 VYAKENGSAAAPTAGLHFTQELLEQIKAKGVQLVFLTLHVGLGTFRPVSVDSIEDHEMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + +A AL +V+ GG+IV+VGTTS+R LET T+ +G + SG+T+IFI+PGY
Sbjct: 228 EFYRLTEESAAALTAVQKNGGKIVAVGTTSIRTLETIGTKFNGELKADSGWTDIFISPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ VD +NFHLPKSTL+MLVSAF G E YQHA+ YRF+S+GD +
Sbjct: 288 KFKVVDAFSTNFHLPKSTLVMLVSAFAGREHVLAAYQHAVDEKYRFFSFGDAMFV 342
>gi|217979658|ref|YP_002363805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylocella silvestris BL2]
gi|254764284|sp|B8EIV1|QUEA_METSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|217505034|gb|ACK52443.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocella silvestris BL2]
Length = 361
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 182/358 (50%), Positives = 241/358 (67%), Gaps = 4/358 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP + IALRP PRD+ARL+VV P P + D + DLP L + D +V
Sbjct: 1 MRVDQFDFDLPDASIALRPAHPRDAARLLVVRPGRLSPAALDDRFIRDLPELLAAGDVLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R I TLH R + W + RP+K ++ G+ + F S
Sbjct: 61 VNDTRVIPARLDGFRARGEAL--ARIEATLHKREGGDLWRAFLRPAKKLRAGETILFSS- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++L A V++K GE+LL F +SG EL+ + VG +PLPPYI+ KR D D DY
Sbjct: 118 -GDAKLAARVVEKGEDGEVLLGFELSGAELDLALERVGRMPLPPYISSKRGADESDAADY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT LL+ L++ G+++ VTLHVGAGTF+PVK EDTDDH M
Sbjct: 177 QTLFADRPGAVAAPTASLHFTPALLAALVAKGVQIERVTLHVGAGTFLPVKAEDTDDHRM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A TA ALN+ + G R+V+ GTTSLR+LE+A DG + +SG T+IFITPG
Sbjct: 237 HAEWGEVSAETAGALNAARRAGRRVVAAGTTSLRILESAAGPDGAVAAFSGDTSIFITPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+AVD+L++NFHLP+STL MLV AF G++ + Y HAI+ YRFYSYGD LL+
Sbjct: 297 YSFKAVDLLLTNFHLPRSTLFMLVCAFSGLQTMRDAYNHAIAAGYRFYSYGDACLLYP 354
>gi|317132377|ref|YP_004091691.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ethanoligenens harbinense YUAN-3]
gi|315470356|gb|ADU26960.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ethanoligenens harbinense YUAN-3]
Length = 341
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 195/357 (54%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLPP RIA P+ RD +RLM + + DLP L D ++
Sbjct: 1 MKKSDFYYDLPPERIAQEPLAQRDQSRLMTLDRATGA---VGHRHFYDLPDLLLPGDCLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A+L G R + + L + W V RP + + G F
Sbjct: 58 LNNSRVLPARLYGNR----EKTGGRVEFVLLNEKKRDEWEVILRPGRTARVGARYVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V++ G ++ F G + R I +G +PLP YI + Y
Sbjct: 111 -GGGLLKAEVLEIIEDGNRIVRFEHEG-DFYRLIEQIGEMPLPHYITHRLKD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L G+++ +VTLHVG GTF PVK + + H+M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTPELLEHLRQKGVRIGYVTLHVGLGTFRPVKADTIEKHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA + K+ GGR+V VGTTS R LE+ G I G+T+IFI PG
Sbjct: 225 HSEHYELPEETAALIRETKASGGRVVGVGTTSCRTLESVAQRYGEIRAAEGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++F+ +D L++NFHLP+STL+MLVSAF G E YQ AI+ YRFYS+GD LL+
Sbjct: 285 FQFQVLDALITNFHLPESTLIMLVSAFAGREHVLHAYQEAIAEQYRFYSFGDAMLLY 341
>gi|324990584|gb|EGC22520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK353]
Length = 342
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSHISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVNSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T K Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLKAYEHAIAERYRFFSFGDAMFI 341
>gi|228981109|ref|ZP_04141410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis Bt407]
gi|228778650|gb|EEM26916.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis Bt407]
gi|326942199|gb|AEA18095.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 350
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETATLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|324993331|gb|EGC25251.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK405]
Length = 342
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQAPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNIQDDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVDELEHGGRIVRFGYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVNLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAHTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|229081682|ref|ZP_04214177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-2]
gi|229152621|ref|ZP_04280810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1550]
gi|228630882|gb|EEK87522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1550]
gi|228701686|gb|EEL54177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-2]
Length = 354
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|222097863|ref|YP_002531920.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Q1]
gi|254764266|sp|B9IYZ2|QUEA_BACCQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221241921|gb|ACM14631.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus cereus Q1]
Length = 350
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDPGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|16125834|ref|NP_420398.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus CB15]
gi|221234595|ref|YP_002517031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus NA1000]
gi|21263914|sp|Q9A7Y2|QUEA_CAUCR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764271|sp|B8GVF3|QUEA_CAUCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13422980|gb|AAK23566.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Caulobacter
crescentus CB15]
gi|220963767|gb|ACL95123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus NA1000]
Length = 366
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 199/366 (54%), Positives = 257/366 (70%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIALRP PRDSAR +VV P ++DH+VSDLP FL DA+V
Sbjct: 1 MRLSDFDFDLPEDRIALRPAEPRDSARFLVVRPG----QAVADHIVSDLPDFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFC----HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L+G+R + + TLH R++P+ WS + RP K +K GD +
Sbjct: 57 FNDTRVIPARLSGLREGRTTGGADGTPVAVEATLHRRLAPDRWSAFMRPGKRLKVGDRVA 116
Query: 117 FFSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F +G+ RL+A + +K + GE++L F +SG +L+ I+ G +PLPPYIA KR
Sbjct: 117 FGGHEGRVGDLGRLDAVIAEKHDGGEVVLAFDLSGPDLDVGIAQHGDMPLPPYIAAKRGE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFT LL RL + G+ ++FVTLHVGAGTF+PVK
Sbjct: 177 DERDRADYQTVYAREDGSVAAPTAGLHFTPQLLERLKAKGVSLHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
++ +H MH+E G + A ALN+ ++ GGRIV VGTTSLRLLE+AT EDGI+ P++
Sbjct: 237 DEVSEHRMHAEYGQVTQEIADALNAARAAGGRIVCVGTTSLRLLESATGEDGIVRPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFR D+LM+NFHLPKSTL MLVSAF G E + Y+HAI+ YRFYSYGD
Sbjct: 297 TAIFITPGYRFRTADVLMTNFHLPKSTLFMLVSAFAGTEAMRAAYEHAIATGYRFYSYGD 356
Query: 353 TSLLFQ 358
+SLLF+
Sbjct: 357 SSLLFK 362
>gi|307312710|ref|ZP_07592341.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti BL225C]
gi|306899435|gb|EFN30067.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti BL225C]
Length = 360
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 215/362 (59%), Positives = 257/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ V D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD--GAPVFEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR+ + +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRYRGEDISTP-VSLTLHMRVAPSRWKAFARPARRLKPGDRISFGHG 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D RD
Sbjct: 118 GSACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +DT D
Sbjct: 178 TDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKADDTAD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T IFI
Sbjct: 238 HVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+SLLF
Sbjct: 298 TPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDSSLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|160934267|ref|ZP_02081654.1| hypothetical protein CLOLEP_03138 [Clostridium leptum DSM 753]
gi|156866940|gb|EDO60312.1| hypothetical protein CLOLEP_03138 [Clostridium leptum DSM 753]
Length = 341
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 140/350 (40%), Positives = 194/350 (55%), Gaps = 17/350 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PRD +RLMV+ I D+ FLN D ++
Sbjct: 1 MKTSDFYYDLPEELIAQTPIEPRDHSRLMVLDKKTGS---IGHRHFYDIIEFLNPGDCLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ ++ L N W V A P K K G F
Sbjct: 58 LNDSRVLPARIYGIK----EGTGSQVEFLLLTHKEENVWEVLAGPGKKAKPGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARDYV 178
G L+A V++ G ++ F E + +G +PLPPYI ++ +
Sbjct: 111 -GNGLLKAEVLEVVEGGNRVIRFEFDPKEGNFYNILDRIGQMPLPPYITKR----LENKE 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K GS AAPTAGLHFT LL +L + GI++ FVTLHVG GTF PVKV+D +H
Sbjct: 166 RYQTVYSKELGSAAAPTAGLHFTPELLEKLKNKGIRLGFVTLHVGLGTFRPVKVDDVTEH 225
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I A + K GGR++ VGTTS R +E+ T +G I G+TNIFI
Sbjct: 226 KMHSEHYEISQEVADLILETKKNGGRVIGVGTTSCRTVESVATFEGQIKASEGWTNIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
PGY F+ +D L++NFHLP+STL+MLVSAF G + T + Y+ A+ YRF+
Sbjct: 286 PGYEFKVLDGLITNFHLPESTLIMLVSAFAGYDHTMQAYKTAVQERYRFF 335
>gi|229071926|ref|ZP_04205137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus F65185]
gi|228711222|gb|EEL63186.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus F65185]
Length = 350
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNAAVKEKYRFFSFGDAMFV 341
>gi|229062113|ref|ZP_04199438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH603]
gi|229169161|ref|ZP_04296876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH621]
gi|228614389|gb|EEK71499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH621]
gi|228717265|gb|EEL68940.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH603]
Length = 354
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 202/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFTDILSYLQEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|297584755|ref|YP_003700535.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
selenitireducens MLS10]
gi|297143212|gb|ADH99969.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
selenitireducens MLS10]
Length = 351
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 207/359 (57%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD++LP IA P+ R+ +RL+V+ +S S + LN DA+V
Sbjct: 1 MDVSAFDYELPEELIAQTPLKNREESRLLVMERTTGD---LSHQTFSSVIDHLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G++ +I L + W +P+K +KKG ++ F
Sbjct: 58 LNDTKVIPARLFGIK----KETGAKIEVLLLKEQDDHVWEALVKPAKRLKKGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A + G LL FS G+ ++ +G +PLPPYI + + Y
Sbjct: 111 -GEGVLQAECTGELPEGRRLLRFSFDGV-FHERLDDLGEMPLPPYIQEQ----LDEKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA +GS AAPTAGLHFT +LL ++ + GI+ F+TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAANRGSAAAPTAGLHFTPDLLEKIRAKGIRTVFLTLHVGLGTFRPVSVDTVEDHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E +A+AL ++RGGRI++VGTTS R LET + SG+T+IFI PG
Sbjct: 225 HAEFYQFSEASARALRETRARGGRIIAVGTTSARTLETIVRDHDDFAAASGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+ +
Sbjct: 285 YRFQGIDGLLTNFHLPKSTLVMLVSAFSKREFVLDAYREAVRERYRFFSFGDAMLIANQ 343
>gi|295689992|ref|YP_003593685.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Caulobacter
segnis ATCC 21756]
gi|295431895|gb|ADG11067.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Caulobacter
segnis ATCC 21756]
Length = 368
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 200/366 (54%), Positives = 256/366 (69%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIALRP PRD+ARL+VV P ++DH+V +LP FL DA+V
Sbjct: 1 MHLSDFDFDLPEDRIALRPAEPRDAARLLVVRPG----QPLADHVVRELPDFLQPGDAMV 56
Query: 61 FNNTKVITAQLNGVRFC----HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L+G+R + + TLH R++P+ WS + RP K +K GD +
Sbjct: 57 FNDTRVIPARLSGLREGRTTGGADGTPVAVEATLHRRLTPDRWSAFMRPGKRLKVGDRVA 116
Query: 117 FFSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F +D + RL+ATV +K GE++L F +SG +L+ I+ G +PLPPYIA KR
Sbjct: 117 FGGRDDRACALDRLDATVAEKHEGGEVVLAFDLSGPDLDVGIARHGDMPLPPYIAAKRGE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFT +LL L + G+ +FVTLHVGAGTF+PVK
Sbjct: 177 DERDRADYQTVYAREDGSVAAPTAGLHFTPSLLEALKAKGVSTHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H MH+E G + A ALN+ ++ GGRI+ VGTTSLRLLE+AT EDG++ P++
Sbjct: 237 DDVSEHKMHAEYGQVTREVADALNAARAAGGRIICVGTTSLRLLESATGEDGVVKPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFRA DILM+NFHLPKSTL MLVSAF G E + Y+HAIS YRFYSYGD
Sbjct: 297 TAIFITPGYRFRAADILMTNFHLPKSTLFMLVSAFAGRETMRAAYEHAISTGYRFYSYGD 356
Query: 353 TSLLFQ 358
SLLF+
Sbjct: 357 GSLLFR 362
>gi|228941586|ref|ZP_04104134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228974515|ref|ZP_04135082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228785232|gb|EEM33244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228818093|gb|EEM64170.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 354
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETATLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|228923170|ref|ZP_04086461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228836549|gb|EEM81899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 350
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|306824944|ref|ZP_07458287.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432771|gb|EFM35744.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 342
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVITEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGRI++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKEDGGRIIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + YQHAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYQHAIQERYRFFSFGDAMFIY 342
>gi|323489999|ref|ZP_08095220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Planococcus
donghaensis MPA1U2]
gi|323396295|gb|EGA89120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Planococcus
donghaensis MPA1U2]
Length = 359
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 200/357 (56%), Gaps = 17/357 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++DFDLP IA P+ R S+RL+V++ S D+ +L+ D +V N+T
Sbjct: 14 DYDFDLPEELIAQTPLLDRTSSRLLVMNKESGET---SHRHFRDITDYLHKGDTLVLNDT 70
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A+L GV+ I L ++ + W +P+K +K G ++ F G+
Sbjct: 71 RVLPARLMGVK----EDTGANIELLLLKQIEDDVWETLVKPAKKVKIGTVVSF----GEG 122
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
L A + G GI + +G +PLPPYI K YQT +
Sbjct: 123 LLRAECTGILDHGGRHFKMIYDGI-FYEILDQLGEMPLPPYIREKLEDQD----RYQTVF 177
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
AK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF PV VE +DH MHSE
Sbjct: 178 AKERGSAAAPTAGLHFTDELLEKIRNKGVNITFITLHVGLGTFRPVSVESIEDHEMHSEF 237
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRF 303
I +A+ +N K GGRIVSVGTTS R LE+ + DG + SG+T+IFI PGY F
Sbjct: 238 YRITKESAELINETKKNGGRIVSVGTTSTRTLESVAQKFDGKLQEDSGWTDIFIFPGYEF 297
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+AVD L++NFHLPKSTL+MLVSA + Y+ A+ YRF+S+GD + ++
Sbjct: 298 KAVDGLITNFHLPKSTLVMLVSALSSRDHILNAYKQAVDERYRFFSFGDAMFIEPQK 354
>gi|327468945|gb|EGF14417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK330]
Length = 342
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIKP----ETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFGYEGI-FLEVLESLGEMPLPPYIHEKLAD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GG +++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGHVIAVGTTSIRTLETIGSKFQGQIEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|307706877|ref|ZP_07643679.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK321]
gi|307617750|gb|EFN96915.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK321]
Length = 342
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D+ + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDNHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK G R+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGSRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + YQHAI+ YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYQHAINERYRFFSFGDAMFIY 342
>gi|225854863|ref|YP_002736375.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae JJA]
gi|225723833|gb|ACO19686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae JJA]
Length = 342
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFYSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|118589194|ref|ZP_01546601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stappia
aggregata IAM 12614]
gi|118438523|gb|EAV45157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stappia
aggregata IAM 12614]
Length = 357
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 196/359 (54%), Positives = 247/359 (68%), Gaps = 6/359 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP RIALRP PRDSAR++VV P ++SD V DLP L DA+V
Sbjct: 1 MRVDQFDFDLPNERIALRPARPRDSARMLVVRP--GEQPLLSDAGVRDLPQLLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R I TLHMR P+ W + RP+K ++ GD + F +
Sbjct: 59 FNDTRVIPAQLEGTRLRGDISAG--IGATLHMRTGPDRWKAFVRPAKKLQLGDTVLF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+RL A V +K +GE+LL F SG +L+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 GFGTRLTAEVTEKGYSGEVLLTFDRSGPDLDVAIASVGHIPLPPYIAQKRGEDDQDRKDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL L GI+ + VTLHVGAGTF+PVK EDT DH M
Sbjct: 175 QTIFAEKDGAVAAPTAGLHFTPELLQALSYRGIEQHRVTLHVGAGTFLPVKAEDTADHKM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK RG ++VSVGTTSLR+LE++ + G+I ++G T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALLAVKVRGNKVVSVGTTSLRILESSAQKTGVITAFAGETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+A+D LM+NFHLP+STL MLVSA G++ + Y HAIS YRFYSYGD SLLF +
Sbjct: 295 YRFKAIDALMTNFHLPRSTLFMLVSALSGLDTMRHAYAHAISQEYRFYSYGDASLLFPQ 353
>gi|259046888|ref|ZP_05737289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella adiacens ATCC 49175]
gi|259036511|gb|EEW37766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella adiacens ATCC 49175]
Length = 345
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
K+FDFDLP IA P+ R S+RL++V I D SDL L + D +V N
Sbjct: 5 TKDFDFDLPEELIAQTPLKDRTSSRLLMVDK---TKHTIEDRHFSDLLEELEAGDTLVVN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + I L + W +P+K +K G ++ F G
Sbjct: 62 NTRVLPARLYGTK----EETGAHIEVLLLTNTEGDKWETLVKPAKRMKVGSVVSF----G 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+ATVI++ G ++ FS G+ + +G +PLPPYI + YQT
Sbjct: 114 DGRLKATVIEELEQGGRIIEFSYEGV-FLEVLESLGEMPLPPYIKERLED----KERYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT L+ ++ G+ + VTLHVG GTF PV V+ +DH MHS
Sbjct: 169 VYAKENGSAAAPTAGLHFTEELMQQIRDKGVNIVPVTLHVGLGTFRPVSVDSLEDHKMHS 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGY 301
E + TA + + K G R+++VGTTS+R LET A DG + P SG+T+IFI+PGY
Sbjct: 229 EYYNVSKETADMIEATKKAGKRVIAVGTTSIRTLETVARDNDGHVVPASGWTDIFISPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD ++NFHLPKSTL+MLVSA+ G E T + YQHAI YRF+S+GD + +
Sbjct: 289 EFGVVDAFVTNFHLPKSTLVMLVSAYLGREFTLEAYQHAIEERYRFFSFGDAMFVHK 345
>gi|261405411|ref|YP_003241652.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. Y412MC10]
gi|261281874|gb|ACX63845.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. Y412MC10]
Length = 343
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 205/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ IS +D+ LN D +V
Sbjct: 1 MNVDLYDFELPEHLIAQTPLLDRSSSRLLTLNKKSG---QISHQTFADIIDSLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEK----EDTGAKAEVLLLKNMGEDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYIKEKLDD----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDQVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ ++ SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQLKGEPLHESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMHAYKEAVDKEYRFFSFGDAMFIY 343
>gi|322372469|ref|ZP_08047005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C150]
gi|321277511|gb|EFX54580.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C150]
Length = 347
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 157/360 (43%), Positives = 212/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLKQRDASKLLVIDPVT---KEMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVTEELDHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ S G+K+ ++TLHVG GTF PV VE+ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIESKGVKLVYLTLHVGLGTFRPVSVENVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYTLSQDAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD + ++
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGDAMFVTRR 344
>gi|228478265|ref|ZP_04062873.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus salivarius SK126]
gi|228249944|gb|EEK09214.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus salivarius SK126]
Length = 347
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 153/360 (42%), Positives = 212/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVT---KEMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ F+ GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVTEELDHGGRIVEFNYDGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRI++VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYTLSQDAADTLNSVKAAGGRIIAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD + ++
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGDAMFVTRR 344
>gi|46577020|sp|Q891Z9|QUEA_CLOTE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 341
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+ LP IA P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 1 MKAKDFDYYLPEELIAQHPLEKRDECRLMVLDKETG---HVEHKVFKDILDYLNKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + ++ L R ++W +P K K G F
Sbjct: 58 LNDTRVMPARLIGEK----EETKGKMEFLLLKRTDKDTWETLVKPGKRAKIGSRFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ L+A VI G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GQGELKAEVIGMAEEGSRIVKFEYDGI-FEEVLDRLGQMPLPPYITEKLED----KEKY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ GIK+ F+TLHVG GTF PVK + ++HIM
Sbjct: 165 QTVYSKESGSAAAPTAGLHFTEELLNKIKEKGIKIVFLTLHVGLGTFRPVKEGEIENHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N+ K GGR+++VGTTS R LET ++ G I SG+TNIF+ PG
Sbjct: 225 HSEYYCISKETADIINTTKEAGGRVIAVGTTSCRTLETLGSKHGKIIEDSGWTNIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ D L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD +
Sbjct: 285 YEFKVTDALITNFHLPQSTLIMLVSALSERERVLNAYEIAVREKYRFFSFGDAMFV 340
>gi|225852594|ref|YP_002732827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis ATCC 23457]
gi|256263912|ref|ZP_05466444.1| queuosine biosynthesis protein [Brucella melitensis bv. 2 str.
63/9]
gi|254764268|sp|C0RJ65|QUEA_BRUMB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|225640959|gb|ACO00873.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis ATCC 23457]
gi|263094045|gb|EEZ17979.1| queuosine biosynthesis protein [Brucella melitensis bv. 2 str.
63/9]
gi|326409115|gb|ADZ66180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis M28]
gi|326538822|gb|ADZ87037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis M5-90]
Length = 363
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 208/361 (57%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DL L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPG----EPFEDRHVYDLFDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|329926750|ref|ZP_08281158.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. HGF5]
gi|328938950|gb|EGG35318.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. HGF5]
Length = 343
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ IS +D+ LN D +V
Sbjct: 1 MNVDLYDFELPEHLIAQTPLLDRSSSRLLTLNKESG---QISHQTFADIIDSLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEK----EDTGAKAEVLLLKNMGEDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYIKEKLDD----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDQVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ + SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQLKGEPLRESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMHAYKEAVDKEYRFFSFGDAMFIY 343
>gi|319939489|ref|ZP_08013849.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus 1_2_62CV]
gi|319811475|gb|EFW07770.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus 1_2_62CV]
Length = 342
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV+ + D + L+ DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVNHETG---QMEDTHFDAIIDQLHPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L ++ + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEKP----ETGGHVELLLLKNIAGDDWEVLAKPAKRLKVGAAISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVLEELEHGGRIVRFHYQGI-FLEVLESLGEMPLPPYIHEKLKD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G +V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAANTLRQVKASGHHVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLSAYQHAIDEKYRFFSFGDAMFI 341
>gi|229163366|ref|ZP_04291318.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus R309803]
gi|228620147|gb|EEK77021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus R309803]
Length = 354
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLM++ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMMLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 115 -GEGKLKATCTGMADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|312863897|ref|ZP_07724135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis F0396]
gi|311101433|gb|EFQ59638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis F0396]
Length = 347
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 155/360 (43%), Positives = 213/360 (59%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVT---KEMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + N + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----NDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ FS +GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVTEELDHGGRIVEFSYNGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQNIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + +G + SG+TNIFI P
Sbjct: 225 HSEFYTLSQEAADTLNSVKATGGRIVAVGTTSIRTLETIGNKYNGRLQAESGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD + ++
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGDAMFVTRR 344
>gi|323142292|ref|ZP_08077124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Phascolarctobacterium sp. YIT 12067]
gi|322413176|gb|EFY04063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Phascolarctobacterium sp. YIT 12067]
Length = 342
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 196/357 (54%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FD+DLP IA P+ PRD +RL+VV I DL +L D +V
Sbjct: 1 MLVTDFDYDLPQELIAQHPMEPRDHSRLLVVDKKTG---EIEHKHFYDLVNYLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + + L R W V RP K ++ G ++F +
Sbjct: 58 FNDTRVIPARLHGTKD-----TGAHVEVFLLTRRDATDWEVLVRPGKKLQVGAKINFSDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VI+ + G ++ F GI E + +G PLPPYI Y
Sbjct: 113 -----LSCEVIEHTDFGGRVVRFKYDGI-FEEILDRLGETPLPPYITAPLED----KERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT LL ++ IG + FVTLHVG GTF PV +DH M
Sbjct: 163 QTVYNRERGSAAAPTAGLHFTKELLQKIKEIGCEEVFVTLHVGLGTFRPVSEAKIEDHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A A+N K+ G RI++VGTT++R LE A DG ++ S +TNIFI PG
Sbjct: 223 HKEFYTVSQEAADAVNKAKAEGRRIIAVGTTAVRTLEAAGA-DGQLHAGSSWTNIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+FR VD L++NFHLP+STLLMLVS E + Y+ A+ YRF+S+GD +
Sbjct: 282 YKFRLVDDLVTNFHLPQSTLLMLVSTLSTREIMLQTYKKAVEEKYRFFSFGDAMFIT 338
>gi|260583655|ref|ZP_05851403.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella elegans ATCC 700633]
gi|260158281|gb|EEW93349.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella elegans ATCC 700633]
Length = 345
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP +IA P+ R S+RL+VV+ + D S++ +L D +V N
Sbjct: 5 TQDFDFDLPEEQIAQTPLKDRTSSRLLVVN---ETEHSVEDKHFSEIIDYLEEGDILVVN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + I L + W +P+K +K G ++ F G
Sbjct: 62 NTRVLPARLYGEK----EGTGAHIEVLLLHNTHGDCWETLVKPAKRMKVGTVVSF----G 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+ATV ++ G ++ F G+ + +G +PLPPYI + YQT
Sbjct: 114 DGRLKATVTEELEQGGRIIEFQYDGV-FLEILESLGEMPLPPYIKERLDDQ----ERYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT L+ ++ GI++ +TLHVG GTF PV V+ +DH MHS
Sbjct: 169 VYAKENGSAAAPTAGLHFTKELMEKIQQKGIQIVPITLHVGLGTFRPVSVDHLEDHKMHS 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITPGY 301
E I TA+ + K G R+++VGTTS+R LET + G I P SG+T+IFI+PGY
Sbjct: 229 EYYHISKETAEVIAETKKNGKRVIAVGTTSIRTLETVGSANQGEIVPSSGWTDIFISPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ VD ++NFHLPKSTL+MLVSA+ G + T + Y HAI YRF+S+GD +++
Sbjct: 289 EFKVVDAFITNFHLPKSTLVMLVSAYLGRDFTLEAYHHAIRERYRFFSFGDAMFVYR 345
>gi|116627427|ref|YP_820046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMD-9]
gi|122267975|sp|Q03LS2|QUEA_STRTD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116100704|gb|ABJ65850.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus thermophilus LMD-9]
gi|312277945|gb|ADQ62602.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (Queuine
synthetase) [Streptococcus thermophilus ND03]
Length = 347
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 155/359 (43%), Positives = 211/359 (58%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVTR---EMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV + + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVTKELDHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYTLSQEAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY+F VD +NFHLPKSTL+MLVSAF G E + Y+HA+ YRF+S+GD + +
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAVQERYRFFSFGDAMFVTR 343
>gi|86357735|ref|YP_469627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli CFN 42]
gi|123511943|sp|Q2K8D6|QUEA_RHIEC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|86281837|gb|ABC90900.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis)protein [Rhizobium etli CFN 42]
Length = 361
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 213/362 (58%), Positives = 256/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV P+ +SDH V DLP+FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPD--AESALSDHHVCDLPSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR+ P+ W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRHRDGA-GGQQVSATLHMRIGPSRWKAFAKPGKRIKEGDRIAFGHS 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K GE+ L F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 118 GESCMIGSLDATVEEKGEAGEVTLAFDLSGPVLDEAIAAVGHIPLPPYIAAKRPEDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTDD
Sbjct: 178 ADYQTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTDD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E G++ A LN+VK+RGGRIV VGTTSLRL+E+A E G I PW+G T IFI
Sbjct: 238 HKMHLESGYVSGEIAAGLNAVKARGGRIVCVGTTSLRLIESAAGESGEIKPWAGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD SLLF
Sbjct: 298 TPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYKHAISTGYRFYSYGDASLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|163942168|ref|YP_001647052.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
weihenstephanensis KBAB4]
gi|226713834|sp|A9VIP4|QUEA_BACWK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|163864365|gb|ABY45424.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Bacillus
weihenstephanensis KBAB4]
Length = 350
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 202/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 1 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFADILSYLQEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKEDGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|189425071|ref|YP_001952248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
lovleyi SZ]
gi|238692103|sp|B3E2S1|QUEA_GEOLS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189421330|gb|ACD95728.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
lovleyi SZ]
Length = 341
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+VKE+ F LP IA P RD +RLMV+ + I+ S + +L +D +V
Sbjct: 1 MLVKEYSFTLPDELIARYPANQRDGSRLMVLDRQTAARSEIA---FSQIVEWLRPDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L V W R SK + G +
Sbjct: 58 LNDTKVIPARLFGQKE-----TGGRIELFLVEPVGDACWRCLLRSSKRCRTGQSIRLAEG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+++ + L+ F + E + VG +P+PPY+ R + D V Y
Sbjct: 113 -----VTAEVVEQLGEQDWLIRFH-GSDDFESWLQRVGQMPIPPYLN--RESEELDRVRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHFT LL R+ GI++ VTLHVG GTF PV+VE DH++
Sbjct: 165 QTVYASESGAVAAPTAGLHFTQELLERIQEKGIRLARVTLHVGLGTFQPVRVERVQDHVI 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + + TA A+ ++RGGR+++VGTT+ R LE A G + G +IFI PG
Sbjct: 225 HRERYRLPSETAAAVTETRARGGRVIAVGTTACRTLEYAADNAGHLQAGQGEADIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD L++NFHLP+STLLMLVSAF G E Y+ A++ +RFYSYGD L+
Sbjct: 285 YRFKVVDALLTNFHLPESTLLMLVSAFGGKEFILSAYEAAVNRQFRFYSYGDAMLI 340
>gi|169832445|ref|YP_001694851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Hungary19A-6]
gi|238688427|sp|B1ICL6|QUEA_STRPI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|168994947|gb|ACA35559.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Hungary19A-6]
Length = 342
Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|304407535|ref|ZP_07389187.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus curdlanolyticus YK9]
gi|304343486|gb|EFM09328.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus curdlanolyticus YK9]
Length = 348
Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 209/360 (58%), Gaps = 15/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ R +RL+ ++ D+ ++ D +V
Sbjct: 1 MNVDLFDFELPEELIAQTPLVERTGSRLLTLNKRTGET---QHGTFLDIEQYVQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FS 119
N+T+VI A+L G++ ++ L + N W A+P+K ++ G L F
Sbjct: 58 LNDTRVIPARLFGIK----RDTGAKVELLLLKAIGDNRWEALAKPAKRLRIGTELAFGMD 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ G+ L A + ++ G ++ F GI + + +G +PLPPYI K
Sbjct: 114 EAGEPLLRAVIEEEGEHGSRIVRFEYEGI-FQELLDRLGEMPLPPYIKEKLDD----RER 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ +GS AAPTAGLHFT+ LL +L G+ + +VTLHVG GTF P+ V+ ++H+
Sbjct: 169 YQTVYARHEGSAAAPTAGLHFTTELLEQLQRKGVGIAYVTLHVGLGTFRPMSVDTVEEHV 228
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFI 297
MHSE + TAQ + KSRGGRI++VGTTS R LE+A + DG + SG+T+IFI
Sbjct: 229 MHSEYFELSETTAQQIVETKSRGGRIIAVGTTSARTLESAASMFTDGQVQACSGWTDIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLPKSTL+MLVSA G + + Y+ A++ YRF+S+GD L++
Sbjct: 289 FPGYSFKLVDALLTNFHLPKSTLVMLVSALAGRDAIMQAYREAVALQYRFFSFGDAMLIY 348
>gi|194397598|ref|YP_002038064.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae G54]
gi|226713852|sp|B5E5S4|QUEA_STRP4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194357265|gb|ACF55713.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae G54]
Length = 342
Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDXWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|311069257|ref|YP_003974180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
atrophaeus 1942]
gi|310869774|gb|ADP33249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
atrophaeus 1942]
Length = 342
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF+LP IA P+ RD++RLMV+ + +SD ++ +F D +V
Sbjct: 1 MKVELFDFELPERLIAQVPLEQRDASRLMVLDKHTGG---LSDSSFKEIVSFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L GV+ ++ L + + + W +P+K +KKG +L F
Sbjct: 58 LNNTRVLPARLFGVK----EDTGAKVELLLLKQETGDRWETLVKPAKRVKKGTVLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G + F GI + +G +PLPPYI + Y
Sbjct: 111 -GDGLLQAVCTEELEHGGRKVEFRYDGI-FYEVLESLGEMPLPPYIKEQLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV ++ ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILGELKEKGVRIEFITLHVGLGTFRPVSADEVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H+E + A TA ALN V+ GGRIVSVGTTS R LET E+ G SG+T+IFI P
Sbjct: 225 HAEFYEMSAETAAALNHVRETGGRIVSVGTTSTRTLETIAGENNGSFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLRAYNHAVEKEYRFFSFGDAMLII 342
>gi|28211815|ref|NP_782759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
tetani E88]
gi|28204257|gb|AAO36696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
tetani E88]
Length = 344
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+ LP IA P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 4 MKAKDFDYYLPEELIAQHPLEKRDECRLMVLDKETG---HVEHKVFKDILDYLNKGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + ++ L R ++W +P K K G F
Sbjct: 61 LNDTRVMPARLIGEK----EETKGKMEFLLLKRTDKDTWETLVKPGKRAKIGSRFIF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ L+A VI G ++ F GI E + +G +PLPPYI K Y
Sbjct: 114 -GQGELKAEVIGMAEEGSRIVKFEYDGI-FEEVLDRLGQMPLPPYITEKLED----KEKY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ GIK+ F+TLHVG GTF PVK + ++HIM
Sbjct: 168 QTVYSKESGSAAAPTAGLHFTEELLNKIKEKGIKIVFLTLHVGLGTFRPVKEGEIENHIM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N+ K GGR+++VGTTS R LET ++ G I SG+TNIF+ PG
Sbjct: 228 HSEYYCISKETADIINTTKEAGGRVIAVGTTSCRTLETLGSKHGKIIEDSGWTNIFMYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ D L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD +
Sbjct: 288 YEFKVTDALITNFHLPQSTLIMLVSALSERERVLNAYEIAVREKYRFFSFGDAMFV 343
>gi|167629905|ref|YP_001680404.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Heliobacterium modesticaldum Ice1]
gi|238687889|sp|B0TF76|QUEA_HELMI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167592645|gb|ABZ84393.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Heliobacterium modesticaldum Ice1]
Length = 344
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 204/358 (56%), Gaps = 15/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +D++LP IA PV PRD++RLMV+ + + DL L+ D +V
Sbjct: 1 MEVALYDYELPKEAIAQTPVEPRDASRLMVLERRTGA---VDHRIFRDLVHILHPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A+L G + + + L + + W V RP + +K G +
Sbjct: 58 VNRTRVIPARLFGKK----RDSDVTVEIVLLTPMGDDRWEVLVRPGRRLKPGVFVDL--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ RL A +++ + G ++ F SG + + I +G +PLPPYI P Y
Sbjct: 111 -GEGRLAAEIVETTDFGGRVVRFHYSG-DFDTLIDEIGQMPLPPYIETALPRQEA--ERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL L GI++ V LHVG GTF PV+V+ ++H M
Sbjct: 167 QTVYSQERGSAAAPTAGLHFTPQLLEDLKKRGIEITSVLLHVGLGTFRPVQVDRIEEHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE +D A+A+ K G R+++VGTT R LETA +G + SG+T+IFI P
Sbjct: 227 HSEFFQVDPEAARAIAKAKQEGRRVIAVGTTVARTLETAAGLHNGTVAAGSGWTDIFIYP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+ +D L++NFHLP+STLLMLVSAF G E+ Y+ A+ YRF+S+GD L+
Sbjct: 287 GYTFQCIDGLITNFHLPRSTLLMLVSAFAGREQVLAAYREALEKGYRFFSFGDAMLII 344
>gi|148989540|ref|ZP_01820899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP6-BS73]
gi|149007314|ref|ZP_01830972.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP18-BS74]
gi|149019372|ref|ZP_01834734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP23-BS72]
gi|168493320|ref|ZP_02717463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC3059-06]
gi|221232156|ref|YP_002511309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae ATCC 700669]
gi|303254571|ref|ZP_07340675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS455]
gi|303259012|ref|ZP_07344991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP-BS293]
gi|303261696|ref|ZP_07347643.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS292]
gi|303264365|ref|ZP_07350285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS397]
gi|303265836|ref|ZP_07351733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS457]
gi|303268169|ref|ZP_07353968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS458]
gi|307127015|ref|YP_003879046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 670-6B]
gi|147761118|gb|EDK68086.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP18-BS74]
gi|147925083|gb|EDK76164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP6-BS73]
gi|147931242|gb|EDK82221.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP23-BS72]
gi|183576547|gb|EDT97075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC3059-06]
gi|220674617|emb|CAR69180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae ATCC 700669]
gi|301802157|emb|CBW34894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae INV200]
gi|302598539|gb|EFL65581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS455]
gi|302637276|gb|EFL67764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS292]
gi|302639955|gb|EFL70411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP-BS293]
gi|302642248|gb|EFL72596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS458]
gi|302644571|gb|EFL74821.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS457]
gi|302646177|gb|EFL76404.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS397]
gi|306484077|gb|ADM90946.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 670-6B]
gi|332074739|gb|EGI85213.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA17545]
Length = 342
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|256822291|ref|YP_003146254.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kangiella
koreensis DSM 16069]
gi|256795830|gb|ACV26486.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kangiella
koreensis DSM 16069]
Length = 365
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 136/356 (38%), Positives = 199/356 (55%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++F FDLP IA P R ++RL+ + + +L LN ND +V
Sbjct: 1 MRLEDFHFDLPDELIARYPTEQRSASRLLCLDGQSGA---VEHKHFYELVDLLNPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + S + R ++ K G +
Sbjct: 58 FNDTRVIPARLFGQKV-----TGGKLEILIERLDSDVEAIAHVRSNRTPKPGSEFVLENG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ E L + + + ++ VG +PLPPYI R + D Y
Sbjct: 113 --------FKVLITGRKEALFALQLQEGDWQTVMTAVGHMPLPPYI--DRADELSDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF LL ++ + GI FVTLHVGAGTF PV+VE+ +H M
Sbjct: 163 QTVYSKVDGAVAAPTAGLHFDDALLEKIGNKGIDSTFVTLHVGAGTFSPVRVENITEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +N+ +++GGR+++VGTTS+R LE+A+ +G I P G T+IFI PG
Sbjct: 223 HSEWFEVSQEVCDKVNAARAKGGRVIAVGTTSVRCLESASA-NGYIQPHMGETDIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+FR+VD L++NFHLP+STL+MLVSAF G + Y A+ AYRF+SYGD+ +
Sbjct: 282 YQFRSVDALITNFHLPESTLMMLVSAFAGKDHIMNAYNEAVKEAYRFFSYGDSMFI 337
>gi|116493018|ref|YP_804753.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Pediococcus pentosaceus ATCC 25745]
gi|122265518|sp|Q03ER1|QUEA_PEDPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116103168|gb|ABJ68311.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Pediococcus pentosaceus ATCC 25745]
Length = 344
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 145/355 (40%), Positives = 203/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++F++DLP IA P+ RD +RL+V+ + D D+ LN DA+V N
Sbjct: 5 TEDFNYDLPHELIAQTPIKERDESRLLVLDHETGA---MEDKHFYDIIDQLNPGDAVVMN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A++ G++ + L + + W +P+K K G + F G
Sbjct: 62 NSRVMPARIYGIKD----KTGGHFEVLLLHNIEGDRWETLVKPAKRAKTGTKIIF----G 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L ATV + G +VF GI + +G +PLPPYI K YQT
Sbjct: 114 DGALTATVTKELEHGGREIVFDYDGI-FMEVLEKLGEMPLPPYIKEKLDD----PERYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K GS AAPTAGLH+T LL ++ GIK+ ++TLHVG GTF PV ++ +DH MHS
Sbjct: 169 VYSKEPGSAAAPTAGLHWTKELLEKVEQKGIKLVYLTLHVGLGTFRPVDEDNIEDHKMHS 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + +A ALN VK +GGRIV+ GTTS+R LET ++ +G I SG+T+IFI PGY
Sbjct: 229 EFYQLSEESAAALNEVKKQGGRIVATGTTSIRTLETIGSKFNGEIKADSGWTDIFIKPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ VD ++NFHLPKSTL+MLV+AF G E YQHAI YRF+S+GD +
Sbjct: 289 EWKVVDAFITNFHLPKSTLVMLVAAFTGRENILNAYQHAIEEKYRFFSFGDAMFI 343
>gi|327439542|dbj|BAK15907.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Solibacillus silvestris StLB046]
Length = 345
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 149/361 (41%), Positives = 205/361 (56%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RLMVV+PN L + H + LN+ D +V
Sbjct: 1 MKVEDFDFYLPEELIAQTPLLDRTASRLMVVNPNS---LEVEHHTFGHILDELNAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ I L + + + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVK----ADTGANIELLLLKQTNDDEWETLVKPAKRVKTGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L AT + + G F+ GI + +G +PLPPYI K Y
Sbjct: 111 -GDGLLTATCTGELDHGGRTFKFTYDGI-FYEILDQLGEMPLPPYIREKLEDQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + + G++V F+TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKERGSAAAPTAGLHFTQPLLEAIKAKGVEVVFITLHVGLGTFRPVSVDSIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A + VK GG+++SVGTTS R LET A+ DG I G+TNIFI P
Sbjct: 225 HSEFYSVSEEAAAVIERVKQAGGKVISVGTTSTRTLETVASKNDGKIVASHGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++A+D L++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD +
Sbjct: 285 GYEYKAIDGLITNFHLPKSTLVMLVSALASKETIMNAYEQAVKEKYRFFSFGDAMFIRPA 344
Query: 360 R 360
+
Sbjct: 345 K 345
>gi|241204662|ref|YP_002975758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858552|gb|ACS56219.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 361
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 212/362 (58%), Positives = 254/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV PN +SDH V DL +FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPN--AESHLSDHRVGDLTSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR PN W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRHRDGA-GGQQVSATLHMRTGPNRWKAFAKPGKRIKQGDRISFGHS 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V +K GE+ L+F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 118 GESCFLGSLDAAVEEKGEAGEVTLLFDLSGPALDEAIAAVGHIPLPPYIAAKRPEDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTDD
Sbjct: 178 ADYQTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTDD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E G++ A A LN+V+ RGGRIV VGTTSLRL+E+A E G I PW+G T IFI
Sbjct: 238 HKMHLESGYVSAEIAARLNAVRERGGRIVCVGTTSLRLVESAAEEGGEIMPWAGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRF+AVD+LM+NFHLP+STL MLV+AF G E Y+HAIS YRFYSYGD SLLF
Sbjct: 298 TPGYRFKAVDMLMTNFHLPRSTLFMLVAAFAGFETMHAAYKHAISTGYRFYSYGDASLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|254693807|ref|ZP_05155635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
gi|261214086|ref|ZP_05928367.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
gi|260915693|gb|EEX82554.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
Length = 363
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 209/361 (57%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPG----EPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATYIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|239637555|ref|ZP_04678527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus warneri L37603]
gi|239596773|gb|EEQ79298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus warneri L37603]
Length = 341
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 210/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+DLP S IA P+ RD +RL+V++ N + D+ + N D +V
Sbjct: 1 MNIEDFDYDLPESLIAQTPLKNRDQSRLLVLNRNNGN---MEHLHFKDVINYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNQLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GDGKIIAECIEELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLESIKAKGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN + +G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNETRKKGHRIISVGTTSTRTLETIRRDHSEFVEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E YQ A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYQKAVEMEYRFFSFGDAMLII 341
>gi|225859181|ref|YP_002740691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 70585]
gi|225720571|gb|ACO16425.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 70585]
Length = 342
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|222153368|ref|YP_002562545.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus uberis 0140J]
gi|222114181|emb|CAR42709.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus uberis 0140J]
Length = 342
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 158/357 (44%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS+RL+++ ++D + LN DA+V
Sbjct: 1 MHTNDFDFDLPEELIAQTPLEKRDSSRLLIIDHQT---KEMTDSHFDQIVDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGEKP----DTHGHVELLLLKNTKEDQWEVLAKPAKRLKVGSKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ + G ++ FS SGI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVIEELDHGGRIVEFSYSGI-FLEVLESLGEMPLPPYIHEKLEDS----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V+ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEALLKKIKDKGVHLVYLTLHVGLGTFRPVSVDSVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+V+VGTTS+R LET T+ DG I SG+TNIFI P
Sbjct: 225 HSEFYHLSEEAAQTLRQVKANGGRLVAVGTTSIRTLETIGTKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G E + YQHA++ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAVNEKYRFFSFGDAMFV 341
>gi|238926810|ref|ZP_04658570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Selenomonas flueggei ATCC 43531]
gi|238885342|gb|EEQ48980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Selenomonas flueggei ATCC 43531]
Length = 343
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 210/356 (58%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP +IA P PRDS+R+MV+ P I L +L D ++
Sbjct: 1 MNISDFDYFLPEEQIAQVPADPRDSSRMMVLSPKTQS---IEHRHFYQLDEYLTDGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GVR + L ++ + W V +P K ++ G ++ F +
Sbjct: 58 FNDTRVIPARLIGVR----QPTGGKAEVFLLRQLERDRWEVLVKPGKKMRVGSVITFGHE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+ + G ++ FS GI E + +GT+PLPPYI Y
Sbjct: 114 -----LSCEVLAYTDFGGRIVKFSYEGI-FEEILDRLGTMPLPPYIHETLED----PERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT +L+ RL G+ + FVTLHVG GTF PV+V++ +DH+M
Sbjct: 164 QTIYSREKGSAAAPTAGLHFTESLMDRLRKKGVHLGFVTLHVGLGTFRPVQVDEIEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA + K G R+V+VGTTS+R LE+A + G+I G TNIFI PG
Sbjct: 224 HSEFYSIPTETADLIRMAKQEGRRVVAVGTTSIRTLESAAVDHGMIEEKRGQTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD +++NFHLPKSTL+MLVSAF G E T + Y+ A+ YRF+S+GD L+
Sbjct: 284 YQFKIVDAVITNFHLPKSTLIMLVSAFAGREFTLQAYRTAVEENYRFFSFGDAMLI 339
>gi|223933305|ref|ZP_03625294.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis 89/1591]
gi|330832602|ref|YP_004401427.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis ST3]
gi|223898035|gb|EEF64407.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis 89/1591]
gi|329306825|gb|AEB81241.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis ST3]
Length = 342
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 158/357 (44%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKQS---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L N W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGYKP----ETMGHVELLLLKNTQGNQWEVLAKPAKRLKVGTTVAF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFSYEGI-FLEVLESLGEMPLPPYIHEKLED----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD +
Sbjct: 285 GYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGDAMFI 341
>gi|182684374|ref|YP_001836121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CGSP14]
gi|182629708|gb|ACB90656.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CGSP14]
Length = 346
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 5 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 62 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 115 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 169 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 229 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 289 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 346
>gi|190891762|ref|YP_001978304.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CIAT 652]
gi|238692548|sp|B3PZR1|QUEA_RHIE6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|190697041|gb|ACE91126.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CIAT 652]
Length = 373
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 214/372 (57%), Positives = 262/372 (70%), Gaps = 14/372 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLS----------CPLVISDHLVSDLP 50
M V FDFDLP RIALRP PRDSARL+VV+P+ +SDH V DLP
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESGPHAESVPHAESALSDHHVYDLP 60
Query: 51 AFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK 110
+FL + DA+VFN+TKVI AQL G+R +++S TLHMR+ P+ W +A+P K IK
Sbjct: 61 SFLRAGDALVFNDTKVIPAQLEGIRHRDGA-GGQQVSATLHMRIGPSRWKAFAKPGKRIK 119
Query: 111 KGDILHFFSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
+GD + F L+ATV +K GE+ L F ++G L+ I+ VG IPLPPYIA
Sbjct: 120 EGDRIAFGHSGESCFLGALDATVEEKGEAGEVTLAFDLTGPALDEAIAAVGHIPLPPYIA 179
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
KRP D RD DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGTF
Sbjct: 180 AKRPEDERDRADYQTIYAREEGAVAAPTAGLHFTPDLFAALDKAGIERHFVTLHVGAGTF 239
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
+PVK +DTDDH MH E G++ A A LN+VK+RGGRIV VGTTSLRL+E+A EDG I
Sbjct: 240 LPVKADDTDDHKMHLESGYVSAEIAARLNAVKARGGRIVCVGTTSLRLIESAAGEDGKIK 299
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
PW+G T IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E + Y+HAIS YRF
Sbjct: 300 PWAGATGIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMRAAYEHAISTGYRF 359
Query: 348 YSYGDTSLLFQK 359
YSYGD SLLF+K
Sbjct: 360 YSYGDASLLFRK 371
>gi|331266082|ref|YP_004325712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis Uo5]
gi|326682754|emb|CBZ00371.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis Uo5]
Length = 346
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 5 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMKDKHFHSIIDMLEPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G ++F
Sbjct: 62 MNDTRVLPARLYGQK----EETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGSRVNF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 115 -GDGRLSAVITEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 169 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK G R+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 229 HSEFYQLSEEAAATLRSVKENGSRVIAVGTTSIRTLETIGSKFNGQIQADSGWTNIFIKP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 289 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQERYRFFSFGDAMFIY 346
>gi|312143982|ref|YP_003995428.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halanaerobium sp. 'sapolanicus']
gi|311904633|gb|ADQ15074.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halanaerobium sp. 'sapolanicus']
Length = 347
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 148/362 (40%), Positives = 206/362 (56%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+ LP IA +P+ RD +RLMV+ P +I + L +L +L D ++
Sbjct: 1 MRVEEFDYQLPEELIAQKPLPERDMSRLMVLDPQN---KMIREDLFKNLKRYLEPGDRLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + EI L + W V +P + KKG + F
Sbjct: 58 LNNSRVIPARLYGEKI----PTGTEIEILLLNELKEGRWEVLVKPGRRAKKGVKIQF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS--GIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q+ LEA V++ + G ++ FS E ++ +G +PLPPYI K +
Sbjct: 111 --QNILEAEVLEYTDFGGRIVEFSWDDGCSSFEEILNKLGEMPLPPYINEK----LDNPE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K +GS AAPTAGLHFT LL L + G+K+ ++TLHVG GTF PVK E +DH
Sbjct: 165 RYQTVYSKKRGSAAAPTAGLHFTDQLLRDLENYGVKIDYITLHVGLGTFRPVKSEKIEDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E I T + ++ G ++V+VGTT R LETA G I + G+T+IFI
Sbjct: 225 KMHAEYAEISPETVARIKKTQANGNKVVAVGTTVTRTLETAAQS-GSIKAFKGWTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ +D L++NFHLPKSTLLMLVSA G E K Y A+ YRF+S GD L+
Sbjct: 284 PGYEFKVIDSLITNFHLPKSTLLMLVSALAGKELILKAYNQAVEEEYRFFSLGDAMLILN 343
Query: 359 KR 360
++
Sbjct: 344 RK 345
>gi|229019642|ref|ZP_04176452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1273]
gi|229025880|ref|ZP_04182276.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1272]
gi|228735432|gb|EEL86031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1272]
gi|228741645|gb|EEL91835.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1273]
Length = 350
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAVLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|227499579|ref|ZP_03929686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus tetradius ATCC 35098]
gi|227218338|gb|EEI83592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus tetradius ATCC 35098]
Length = 340
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 199/356 (55%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD+ LP IA P RD AR+MV+ I D D+ +LN D +V
Sbjct: 1 MKTEDFDYYLPEKLIAQHPSDKRDGARMMVLDKKNGA---IEDKYFYDIIDYLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R +E+ I L + W V RP K +K G + F +
Sbjct: 58 MNDTRVIPARLFGHR----KDKEESIEVFLLHNIEGKVWEVLVRPGKKMKIGAEVIFSEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VID G ++ F+ GI + +G +PLPPYI K +Y
Sbjct: 114 -----LSCKVIDIKEDGNRIVEFTYDGI-FNEILDKLGNVPLPPYIKEKLKD----PEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL R+ G+K+ F+TL+VG GTF PV ED DH M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKRIEDKGVKLAFLTLNVGLGTFRPVNEEDITDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N + G +I++VGTTS+R LE+ + G I SG+T+IFI PG
Sbjct: 224 HSEFYTLSKETASIINEGRKNGNKIIAVGTTSIRTLESVFKKCGEIREDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++ VD +++NFHLPKSTL+MLV+AF E Y +A+ YRF+S+GD +
Sbjct: 284 FEYKVVDSVITNFHLPKSTLIMLVAAFTSREIILNAYNYAVKEEYRFFSFGDCMFI 339
>gi|307709512|ref|ZP_07645968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK564]
gi|307619731|gb|EFN98851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK564]
Length = 342
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRDTG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGRI++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAASTLRSVKENGGRIIAVGTTSIRTLETVGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|257081115|ref|ZP_05575476.1| queuosine biosynthesis protein [Enterococcus faecalis E1Sol]
gi|257415434|ref|ZP_05592428.1| queuosine biosynthesis protein [Enterococcus faecalis AR01/DG]
gi|256989145|gb|EEU76447.1| queuosine biosynthesis protein [Enterococcus faecalis E1Sol]
gi|257157262|gb|EEU87222.1| queuosine biosynthesis protein [Enterococcus faecalis ARO1/DG]
Length = 343
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 148/355 (41%), Positives = 205/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGA---MEDKHFHDILDELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEKP----ETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLKAVVKEELEHGGRIIEFKYDGI-FLEILESLGEMPLPPYIKERLDD----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H MHS
Sbjct: 168 VYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD +
Sbjct: 288 QFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGDAMFI 342
>gi|225857051|ref|YP_002738562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae P1031]
gi|225724890|gb|ACO20742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae P1031]
Length = 342
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKM----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|229918408|ref|YP_002887054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Exiguobacterium sp. AT1b]
gi|229469837|gb|ACQ71609.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Exiguobacterium sp. AT1b]
Length = 352
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 136/359 (37%), Positives = 201/359 (55%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V ++DF+LP IA P+ R S+RL+V+ I D+ +LN DA+V
Sbjct: 6 LNVNDYDFELPEELIAQVPLLDRTSSRLLVLDRETGD---IEHRHFRDVLDYLNEGDALV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G + ++ L + + W +P+K ++ G I+ F
Sbjct: 63 VNDSRVLPARLFGAK----QETGGKVELLLLKQTEDDVWEALVKPAKKVRVGSIVEF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A +++ G F GI + +GT+PLPPYI + Y
Sbjct: 116 -GDGLLRAECVEELPEGGRRFKFDYDGI-FYEILDELGTMPLPPYIREQLDDQD----RY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL + G+++ +TLHVG GTF PV + ++H M
Sbjct: 170 QTVYARERGSAAAPTAGLHFTEELLEAAKAKGVRLIPLTLHVGLGTFRPVTADSIEEHTM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +A AL +++ GGRI +VGTTS R LET + G SG+T+IFI PG
Sbjct: 230 HSEYFELSAESAAALREIRANGGRIFAVGTTSTRTLETIMRDHGDFVESSGWTDIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+A+D L++NFHLPKSTL+MLVSAF + Y+ A++ YRF+S+GD L+ +K
Sbjct: 290 VELKAIDGLITNFHLPKSTLVMLVSAFATRDIILHAYRTAVAERYRFFSFGDAMLITRK 348
>gi|229135242|ref|ZP_04264040.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST196]
gi|228648220|gb|EEL04257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST196]
Length = 354
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|149011658|ref|ZP_01832854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP19-BS75]
gi|147764089|gb|EDK71021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP19-BS75]
Length = 342
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|322388742|ref|ZP_08062339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus infantis ATCC 700779]
gi|321140361|gb|EFX35869.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus infantis ATCC 700779]
Length = 345
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 202/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FDF LP IA P+ RD+++L++V+ D + L DA+V
Sbjct: 4 LNTNDFDFHLPEELIAQTPLEKRDASKLLMVNRKTG---EFQDRHFHSIIEMLEPGDALV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 61 MNDTRVLPARLHGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVIF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 114 -GDGRLSAVVTEELTHGGRIVRFEYEGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 168 QTVYAKESGSAAAPTAGLHFTKELLEEIQQKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 228 HSEFYQLSEEAAATLRQVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E K YQHAI YRF+S+GD ++
Sbjct: 288 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLKAYQHAIDEKYRFFSFGDAMFIY 345
>gi|149002808|ref|ZP_01827734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS69]
gi|237650471|ref|ZP_04524723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CCRI 1974]
gi|237821798|ref|ZP_04597643.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CCRI 1974M2]
gi|147759102|gb|EDK66096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS69]
Length = 342
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|160947141|ref|ZP_02094308.1| hypothetical protein PEPMIC_01073 [Parvimonas micra ATCC 33270]
gi|158446275|gb|EDP23270.1| hypothetical protein PEPMIC_01073 [Parvimonas micra ATCC 33270]
Length = 347
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 145/360 (40%), Positives = 203/360 (56%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FDF+L S IA P+ R S++L+VV+ + ++ ++ +D +V
Sbjct: 4 LKTDDFDFELDESLIAQFPLKDRSSSKLLVVNREN---FDLEHKNFKNIVDYIKKDDVLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R +++ I L + N+W +P K +K G + F
Sbjct: 61 INDTKVIPARLFGARPG----KDEAIEVLLLKKHDDNTWETLVKPGKKMKIGSKVEF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+ GE + FS GI E + +GT+PLPPYI K + Y
Sbjct: 114 -GNGKLLGEVVGISEEGERFVKFSYDGI-FEEILDELGTMPLPPYIHEK----LEERDRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L G+K+ VTLHVG GTF PVKV++ +H M
Sbjct: 168 QTVYAKHNGSAAAPTAGLHFTDELLKELQEKGVKIARVTLHVGLGTFRPVKVDNVLEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I + + +NS K +G RI +VGTTS+R LET + G + G T+IFI PG
Sbjct: 228 HDEYYEISEESVEIINSAKEKGNRIFAVGTTSVRTLETVYKKYGELVACKGNTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+ F+ VD L++NFHLPKSTL+MLVSAF E Y A + YRF+S+GD L+ +++
Sbjct: 288 FEFKVVDCLITNFHLPKSTLIMLVSAFASKEIIMNAYNEATKNKYRFFSFGDAMLIKKEK 347
>gi|223985620|ref|ZP_03635671.1| hypothetical protein HOLDEFILI_02977 [Holdemania filiformis DSM
12042]
gi|223962435|gb|EEF66896.1| hypothetical protein HOLDEFILI_02977 [Holdemania filiformis DSM
12042]
Length = 340
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 194/356 (54%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFDF+LP IA P+ R ++RL+V+H + I D+ +L D +V
Sbjct: 1 MKTSEFDFELPQELIAQTPLAKRSASRLLVLHRSTGA---IEHRHFYDIVDYLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + E L +R + W +KV+K G I+ F
Sbjct: 58 RNNTRVIPARLFGTKEGTGAHVEL-----LLLRQEGDEWECLVGNAKVVKLGTIISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L+A I G GI + +G +PLPPYI K Y
Sbjct: 110 -NEGELKAECIGIGEKGLRQFRMIYDGI-FYEILEKLGNVPLPPYIKEKLND----PERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK++GS AAPTAGLHFT L +L + G++V +TLHVG GTF P+ ED DH M
Sbjct: 164 QTVYAKVKGSAAAPTAGLHFTPELFDQLKAKGVEVEDITLHVGLGTFRPMDTEDIADHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA LN K+ G RI++VGTTS R LE ++ G T+IFI PG
Sbjct: 224 HSEFFMMDQATADRLNQAKAEGRRIIAVGTTSCRTLEAIMSKYGEFRECHEDTDIFIFPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+A+D L++NFHLPKSTL+MLVSAF ++ YQ AI YRF+S+GD+ +
Sbjct: 284 YSFQAIDGLITNFHLPKSTLVMLVSAFATKDQIMTAYQAAIDEKYRFFSFGDSMFI 339
>gi|163731371|ref|ZP_02138818.1| S-adenosylmethionine [Roseobacter litoralis Och 149]
gi|161394825|gb|EDQ19147.1| S-adenosylmethionine [Roseobacter litoralis Och 149]
Length = 351
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 168/361 (46%), Positives = 219/361 (60%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V ISD +VSDLP +L+ D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPAVPRTSARLLVA-----KGQQISDSIVSDLPNWLSPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + I TL + WS +P K +K G+ + F
Sbjct: 56 LNDTRVIPARLTGARHRDTAQGPMQARIEVTLLEPDARGDWSALIKPLKKVKIGEEIIFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + G+ L F++ G + + ++ G +PLPPYIA +RP D RD
Sbjct: 116 D------VLRATLQSVTDGQGFLKFNLEGDDFDAALNAAGAMPLPPYIATRRPADERDKS 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LLS L + G+ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQNNGAVAAPTASLHFDEALLSELAARGVLFSYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K G R++ VGTT+LRL+ETA E G I W G T+IFI
Sbjct: 230 KMHAEWGQVSAVAAAEINATKQAGKRVIPVGTTALRLIETAGRE-GQITAWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RF D LM+NFHLPKSTL+MLVSA G +E + +Y HAI+ YRF+SYGD SLL
Sbjct: 289 PGFRFNVADALMTNFHLPKSTLMMLVSALMGYDEVRTIYNHAIAEKYRFFSYGDASLLIP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|29375455|ref|NP_814609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis V583]
gi|227520114|ref|ZP_03950163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0104]
gi|227554979|ref|ZP_03985026.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis HH22]
gi|229546713|ref|ZP_04435438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1322]
gi|229548806|ref|ZP_04437531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis ATCC 29200]
gi|255971322|ref|ZP_05421908.1| queuosine biosynthesis protein [Enterococcus faecalis T1]
gi|255973941|ref|ZP_05424527.1| queuosine biosynthesis protein [Enterococcus faecalis T2]
gi|256617740|ref|ZP_05474586.1| queuosine biosynthesis protein [Enterococcus faecalis ATCC 4200]
gi|256761626|ref|ZP_05502206.1| queuosine biosynthesis protein [Enterococcus faecalis T3]
gi|256854284|ref|ZP_05559648.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis T8]
gi|256957271|ref|ZP_05561442.1| queuosine biosynthesis protein [Enterococcus faecalis DS5]
gi|256959995|ref|ZP_05564166.1| queuosine biosynthesis protein [Enterococcus faecalis Merz96]
gi|256964309|ref|ZP_05568480.1| queuosine biosynthesis protein [Enterococcus faecalis HIP11704]
gi|257077755|ref|ZP_05572116.1| queuosine biosynthesis protein [Enterococcus faecalis JH1]
gi|257083784|ref|ZP_05578145.1| queuosine biosynthesis protein [Enterococcus faecalis Fly1]
gi|257086209|ref|ZP_05580570.1| queuosine biosynthesis protein [Enterococcus faecalis D6]
gi|257089281|ref|ZP_05583642.1| queuosine biosynthesis protein [Enterococcus faecalis CH188]
gi|257418465|ref|ZP_05595459.1| queuosine biosynthesis protein [Enterococcus faecalis T11]
gi|257421116|ref|ZP_05598106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis X98]
gi|293383747|ref|ZP_06629654.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis R712]
gi|293388778|ref|ZP_06633271.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis S613]
gi|294781281|ref|ZP_06746627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis PC1.1]
gi|307267946|ref|ZP_07549334.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4248]
gi|307271868|ref|ZP_07553136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0855]
gi|307277297|ref|ZP_07558399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2134]
gi|307278436|ref|ZP_07559511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0860]
gi|307286677|ref|ZP_07566763.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0109]
gi|307292452|ref|ZP_07572306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0411]
gi|312904428|ref|ZP_07763588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0635]
gi|312907038|ref|ZP_07766034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 512]
gi|312952863|ref|ZP_07771724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0102]
gi|312978705|ref|ZP_07790432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 516]
gi|46576997|sp|Q837H2|QUEA_ENTFA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|29342915|gb|AAO80679.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis V583]
gi|227072458|gb|EEI10421.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0104]
gi|227175888|gb|EEI56860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis HH22]
gi|229306035|gb|EEN72031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis ATCC 29200]
gi|229308173|gb|EEN74160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1322]
gi|255962340|gb|EET94816.1| queuosine biosynthesis protein [Enterococcus faecalis T1]
gi|255966813|gb|EET97435.1| queuosine biosynthesis protein [Enterococcus faecalis T2]
gi|256597267|gb|EEU16443.1| queuosine biosynthesis protein [Enterococcus faecalis ATCC 4200]
gi|256682877|gb|EEU22572.1| queuosine biosynthesis protein [Enterococcus faecalis T3]
gi|256709844|gb|EEU24888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis T8]
gi|256947767|gb|EEU64399.1| queuosine biosynthesis protein [Enterococcus faecalis DS5]
gi|256950491|gb|EEU67123.1| queuosine biosynthesis protein [Enterococcus faecalis Merz96]
gi|256954805|gb|EEU71437.1| queuosine biosynthesis protein [Enterococcus faecalis HIP11704]
gi|256985785|gb|EEU73087.1| queuosine biosynthesis protein [Enterococcus faecalis JH1]
gi|256991814|gb|EEU79116.1| queuosine biosynthesis protein [Enterococcus faecalis Fly1]
gi|256994239|gb|EEU81541.1| queuosine biosynthesis protein [Enterococcus faecalis D6]
gi|256998093|gb|EEU84613.1| queuosine biosynthesis protein [Enterococcus faecalis CH188]
gi|257160293|gb|EEU90253.1| queuosine biosynthesis protein [Enterococcus faecalis T11]
gi|257162940|gb|EEU92900.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis X98]
gi|291078823|gb|EFE16187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis R712]
gi|291081935|gb|EFE18898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis S613]
gi|294451617|gb|EFG20073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis PC1.1]
gi|295113928|emb|CBL32565.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Enterococcus sp. 7L76]
gi|306496483|gb|EFM66046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0411]
gi|306502155|gb|EFM71439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0109]
gi|306504942|gb|EFM74137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0860]
gi|306506004|gb|EFM75172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2134]
gi|306511374|gb|EFM80376.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0855]
gi|306515587|gb|EFM84114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4248]
gi|310627023|gb|EFQ10306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 512]
gi|310629166|gb|EFQ12449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0102]
gi|310632255|gb|EFQ15538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0635]
gi|311288412|gb|EFQ66968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 516]
gi|315027055|gb|EFT38987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2137]
gi|315029030|gb|EFT40962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4000]
gi|315032349|gb|EFT44281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0017]
gi|315034393|gb|EFT46325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0027]
gi|315148027|gb|EFT92043.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4244]
gi|315149629|gb|EFT93645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0012]
gi|315153155|gb|EFT97171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0031]
gi|315155173|gb|EFT99189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0043]
gi|315157708|gb|EFU01725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0312]
gi|315165057|gb|EFU09074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1302]
gi|315167869|gb|EFU11886.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1341]
gi|315171772|gb|EFU15789.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1342]
gi|315174888|gb|EFU18905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1346]
gi|315574093|gb|EFU86284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0309B]
gi|315577222|gb|EFU89413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0630]
gi|315581758|gb|EFU93949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0309A]
gi|323480051|gb|ADX79490.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis 62]
gi|327534451|gb|AEA93285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis OG1RF]
Length = 343
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 148/355 (41%), Positives = 205/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---MEDKHFHDILDELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEKP----ETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLKAVVKEELEHGGRIIEFKYDGI-FLEILESLGEMPLPPYIKERLDD----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H MHS
Sbjct: 168 VYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD +
Sbjct: 288 QFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGDAMFI 342
>gi|322517220|ref|ZP_08070102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis ATCC 49124]
gi|322124207|gb|EFX95731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis ATCC 49124]
Length = 347
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 156/360 (43%), Positives = 212/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVT---KEMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + N + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----NDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVTEELDHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQNIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + +G + SG+TNIFI P
Sbjct: 225 HSEFYTLSQEAADTLNSVKATGGRIVAVGTTSIRTLETIGNKYNGRLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD + Q+
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGDAMFVTQR 344
>gi|313637715|gb|EFS03084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri FSL S4-171]
Length = 342
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATG---EIKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGTKD----ETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGELVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLV + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVXXLSDRNKILTAYNHAVEQQYRFFSFGDAMFI 341
>gi|220922620|ref|YP_002497922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium nodulans ORS 2060]
gi|219947227|gb|ACL57619.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacterium nodulans ORS 2060]
Length = 364
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 194/363 (53%), Positives = 247/363 (68%), Gaps = 10/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSARLM V P D V DLP L D +V
Sbjct: 4 MRVDLFDFDLPEALIALRPAVPRDSARLMRVRPGEPPA----DAQVRDLPDLLRPGDCLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G+R + + LH R + + W +ARP+K +++GD + F +
Sbjct: 60 FNDTKVIPARLRGLRAR-PDGTVVRVEAMLHHREAADCWRAFARPAKRLREGDRIRFGAG 118
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
L+ATV+ + GEI L F ++G L+ + +G +PLPPYIA +RP DAR
Sbjct: 119 QEGAACDLGHLDATVVARGEGGEITLAFDLAGAVLDEAVVRLGELPLPPYIAGRRPADAR 178
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHFT +LL+RL + GI VTLHVGAGTF+PVK EDT
Sbjct: 179 DAADYQTVYARAPGAVAAPTAGLHFTPDLLARLDAAGIGQARVTLHVGAGTFLPVKAEDT 238
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MH+E G I TA ALN V++ GGRIV+VGTT+LRL+E+A DG + P++G T+I
Sbjct: 239 ADHRMHAETGEITPETAAALNRVRAAGGRIVAVGTTALRLVESAAAPDGTLRPFAGETDI 298
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ ++ Y AI+ YRFYSYGD+SL
Sbjct: 299 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFAGLDTMREAYAAAIARGYRFYSYGDSSL 358
Query: 356 LFQ 358
LF+
Sbjct: 359 LFR 361
>gi|325479477|gb|EGC82573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 340
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 204/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD+ LP IA P RD AR+MV+ I + D+ +LN D +V
Sbjct: 1 MKTEDFDYYLPEDLIAQHPSDKRDEARMMVLDKKTG---EICNKYFYDVIDYLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R +++ I L + W V RP K +K G + F +
Sbjct: 58 MNDTRVIPARLFGHRDG----KDESIEVFLLHNIEGKKWEVLVRPGKKMKIGTEVIFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A VID G ++ FS +GI + +G +PLPPYI K +Y
Sbjct: 114 -----LSAKVIDIKEDGNRVVEFSYAGI-FNEILDKLGNVPLPPYIKEKLKD----PEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT +LL ++ G+K+ F+TL+VG GTF PV ED DH M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKDLLKKIEEKGVKLAFLTLNVGLGTFRPVNEEDITDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ TA+ +N K +I++VGTTS+R LE+ + G I SG+T+IFI PG
Sbjct: 224 HSEFYTLNKETAEIINQAKKNNKKIIAVGTTSIRTLESVYKKCGEIREDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++ VD +++NFHLPKSTL+MLV+AF + Y +A+ YRF+S+GD L+
Sbjct: 284 FEYKVVDSVITNFHLPKSTLIMLVAAFTSKDIILNAYNYAVKEKYRFFSFGDCMLI 339
>gi|15673557|ref|NP_267731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis Il1403]
gi|13878678|sp|Q9CFA6|QUEA_LACLA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|12724579|gb|AAK05673.1|AE006388_4 S-adenosylmethionine tRNA ribosyltransferase [Lactococcus lactis
subsp. lactis Il1403]
gi|326407043|gb|ADZ64114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis CV56]
Length = 345
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 145/361 (40%), Positives = 208/361 (57%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ R +RL+++ P + D ++ L + DA+V
Sbjct: 1 MNINDFDFDLPEELIAQTPLEKRSESRLLILDPKT---EELEDRHFYNIIDELEAGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 58 LNNTRVLPARLHGER----AETGGHIELLLLKDMGQNRWETLAKPARKMKVGEEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V++ + G ++ F GI + +G +PLPPYI + Y
Sbjct: 111 -GDGRLKAVVVEVLDHGGRIVEFKYDGI-FLEILESLGEMPLPPYIHEQLQDQ----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK+ G +IV+ GTTS+R LET ++ DG I SG+T+IFI P
Sbjct: 225 HSEFYRLTEEAAAQLRAVKASGHKIVASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++ VD +NFHLPKSTL+MLV+AF G + YQHAI YRF+S+GD + K
Sbjct: 285 GYEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLDAYQHAIDEKYRFFSFGDAMFVRPK 344
Query: 360 R 360
+
Sbjct: 345 K 345
>gi|69249043|ref|ZP_00604858.1| Queuosine biosynthesis protein [Enterococcus faecium DO]
gi|257878859|ref|ZP_05658512.1| queuosine biosynthesis protein [Enterococcus faecium 1,230,933]
gi|257881495|ref|ZP_05661148.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,502]
gi|257885767|ref|ZP_05665420.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,501]
gi|257890717|ref|ZP_05670370.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,410]
gi|260558424|ref|ZP_05830620.1| queuosine biosynthesis protein [Enterococcus faecium C68]
gi|261207140|ref|ZP_05921829.1| queuosine biosynthesis protein [Enterococcus faecium TC 6]
gi|289565261|ref|ZP_06445712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium D344SRF]
gi|293556909|ref|ZP_06675470.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1039]
gi|293560279|ref|ZP_06676776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1162]
gi|294615101|ref|ZP_06694987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1636]
gi|294618443|ref|ZP_06698013.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1679]
gi|294620892|ref|ZP_06700093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium U0317]
gi|314943499|ref|ZP_07850266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133C]
gi|314991571|ref|ZP_07857047.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133B]
gi|314994904|ref|ZP_07860031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a01]
gi|68194302|gb|EAN08818.1| Queuosine biosynthesis protein [Enterococcus faecium DO]
gi|257813087|gb|EEV41845.1| queuosine biosynthesis protein [Enterococcus faecium 1,230,933]
gi|257817153|gb|EEV44481.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,502]
gi|257821623|gb|EEV48753.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,501]
gi|257827077|gb|EEV53703.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,410]
gi|260075598|gb|EEW63904.1| queuosine biosynthesis protein [Enterococcus faecium C68]
gi|260078768|gb|EEW66470.1| queuosine biosynthesis protein [Enterococcus faecium TC 6]
gi|289162917|gb|EFD10766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium D344SRF]
gi|291592043|gb|EFF23666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1636]
gi|291595284|gb|EFF26607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1679]
gi|291599503|gb|EFF30519.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium U0317]
gi|291600993|gb|EFF31284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1039]
gi|291605729|gb|EFF35166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1162]
gi|313590886|gb|EFR69731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a01]
gi|313593855|gb|EFR72700.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133B]
gi|313597871|gb|EFR76716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133C]
Length = 343
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 147/355 (41%), Positives = 203/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMEDKHFHEIIEELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEKP----DTGAHLEVLLLTNTQGDTWETLIKPAKRAKVGTRISF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLQAVVKEELEHGGRIIDFEYEGI-FLEILESLGEMPLPPYIKERLED----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H MHS
Sbjct: 168 VYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 288 EFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGDAMFV 342
>gi|253751451|ref|YP_003024592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis SC84]
gi|253753352|ref|YP_003026493.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis P1/7]
gi|253755819|ref|YP_003028959.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis BM407]
gi|251815740|emb|CAZ51341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis SC84]
gi|251818283|emb|CAZ56092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis BM407]
gi|251819598|emb|CAR45300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis P1/7]
gi|319757868|gb|ADV69810.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis JS14]
Length = 342
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKRS---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGYKP----ETMGHVELLLLKNTQGDQWEVLAKPAKRLKVGTTVAF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFSYEGI-FLEVLESLGEMPLPPYIHEKLED----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD +
Sbjct: 285 GYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGDAMFI 341
>gi|126654017|ref|ZP_01725850.1| hypothetical protein BB14905_09820 [Bacillus sp. B14905]
gi|126589491|gb|EAZ83635.1| hypothetical protein BB14905_09820 [Bacillus sp. B14905]
Length = 346
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 202/361 (55%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF+LP IA P+ R ++RLMVV P + + H + + L + D +V
Sbjct: 1 MRVEDFDFELPEELIAQTPLVDRTASRLMVVTPGS---IEVEHHHFAHVLDELRAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV-SPNSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L GV+ I L ++ + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVK----EETGAHIEVLLLKQLAGSDEWETLVKPAKRVKVGTVITF-- 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L AT + + G F GI + +G +PLPPYI K
Sbjct: 112 --GDGLLTATCTGELDHGGRTFEFHYDGI-FYEILEQLGEMPLPPYIREKLED----KDR 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK +GS AAPTAGLHFT LL ++ + G++V F+TLHVG GTF PV V+ ++H
Sbjct: 165 YQTVYAKERGSAAAPTAGLHFTEELLEQVKAKGVEVVFITLHVGLGTFRPVSVDSIENHE 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MH+E + A +N VK GG++++VGTTS R LET ++ G + P G+T+IFI
Sbjct: 225 MHAEFYSVTDEAADTINRVKRNGGKVIAVGTTSTRTLETIGSKYGGEVRPEQGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F VD L++NFHLPKSTL+MLVS E YQ A+ YRF+S+GD +
Sbjct: 285 PGYTFSVVDGLITNFHLPKSTLVMLVSTLATRETILSAYQQAVEEKYRFFSFGDAMFIRP 344
Query: 359 K 359
K
Sbjct: 345 K 345
>gi|311694369|gb|ADP97242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
bacterium HP15]
Length = 367
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 204/356 (57%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + + S+LP L D +V
Sbjct: 1 MNVSDFHFDLPDELIARYPLKDRSASRLLCLDGLSG---KLDHRIFSELPDLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + R SK +K+G + +
Sbjct: 58 FNNTRVIPARLFGKKE-----TGGQVEVLVERVTGEPDIIAHVRASKALKQGQKVIL--E 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG S A + + S + + +G +PLPPY+ RP ++ D Y
Sbjct: 111 DGTSLRMAGRDEAL-----FHLVCESEEPVLEVLERIGHMPLPPYV--DRPDESTDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +LL +L + GI+ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 164 QTVYAREAGAVAAPTAGLHFDESLLEKLAACGIESAFVTLHVGAGTFQPVRVDKIEDHTM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + A+ ++RGGR+V+VGTTS+R LE+A+ G + ++G T+IFI PG
Sbjct: 224 HSEVVNVPQDAVDAIERTRARGGRVVAVGTTSVRSLESASR-GGRLRAFTGETDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD L++NFHLP+STL+MLVSAF G + Y+ A+ YRF+SYGD +
Sbjct: 283 YRFQTVDALITNFHLPESTLIMLVSAFAGYDNVMSAYREAVKERYRFFSYGDAMFI 338
>gi|258645434|ref|ZP_05732903.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
invisus DSM 15470]
gi|260402785|gb|EEW96332.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
invisus DSM 15470]
Length = 339
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 137/356 (38%), Positives = 196/356 (55%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++F++ LP IA +P PRDS RL++V D+ + D V
Sbjct: 1 MKLEDFNYVLPKELIAQQPAEPRDSCRLLMVDKKTGEW---QHRRFRDILDEIRPGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L + W + P + G + F
Sbjct: 58 FNNTKVIPARLFGRR----KGTGGKVEALLLTPKGNDVWEILVNPGRKALPGQEIEFSE- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
TVIDK G L+ F SG + + + +G +P PPYI +K + +Y
Sbjct: 113 ----NFSCTVIDKTEFGGRLVKFHYSG-DFDNWLDQLGEMPTPPYIHKK----LENKDEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G ++ FVTLHVG GTF PV E+ +DH M
Sbjct: 164 QTVYAKFKGSAAAPTAGLHFTPELLEKMKDKGAELLFVTLHVGIGTFRPVAEENIEDHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I+ TAQ +N K G RI++VGTTS+R LE+A G + S +T ++I PG
Sbjct: 224 HREWYTIEKETAQKVNEAKEEGRRIIAVGTTSVRTLESAGQT-GRVEAGSSWTQLYIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD +++NFHLP+STL+M++++F G E Y+ A+ YRF+S+GD L
Sbjct: 283 YQWQVVDAIVTNFHLPESTLIMMMASFAGREHILAAYEEAVRQKYRFFSFGDAMFL 338
>gi|330683929|gb|EGG95696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU121]
Length = 341
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 143/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+DLP S IA P+ RD +RL+V++ + D+ + N D +V
Sbjct: 1 MNIEDFDYDLPESLIAQTPLKNRDQSRLLVLNRKNGN---MEHLHFKDVINYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNQLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GDGKIIAECIEELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLESIKAKGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN + G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMMQETADLLNKTRKNGHRIISVGTTSTRTLETIRRDHSEFVEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E YQ A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYQKAVEMEYRFFSFGDAMLII 341
>gi|300859629|ref|ZP_07105717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TUSoD Ef11]
gi|300850447|gb|EFK78196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TUSoD Ef11]
gi|315145163|gb|EFT89179.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2141]
gi|315163072|gb|EFU07089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0645]
Length = 343
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 148/355 (41%), Positives = 204/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+VV+ D D+ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGDT---EDKHFHDILDELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEKP----ETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLKAVVKEELEHGGRIIEFKYDGI-FLEILESLGEMPLPPYIKERLDD----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H MHS
Sbjct: 168 VYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD +
Sbjct: 288 QFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGDAMFI 342
>gi|301794456|emb|CBW36890.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae INV104]
Length = 342
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|312901590|ref|ZP_07760862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0470]
gi|311291311|gb|EFQ69867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0470]
Length = 343
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 147/355 (41%), Positives = 205/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---MEDKHFHDILDELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEKP----ETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLKAVVKEELEHGGRIIEFKYDGI-FLEILESLGEMPLPPYIKERLDD----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H MHS
Sbjct: 168 VYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T Y+HAI YRF+S+GD +
Sbjct: 288 QFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYKHAIEEKYRFFSFGDAMFI 342
>gi|295105586|emb|CBL03130.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii SL3/3]
Length = 342
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 201/356 (56%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV+ I + DLP FL D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPASPRDAARLMVL---SQKDDSIQHKVFRDLPEFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A++ GV+ L +V + W A+P K ++ G + F
Sbjct: 58 VNNSKVLPARIVGVK----QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V + G + F L ++ G +PLPPYI ++ ++ Y
Sbjct: 111 -GDGSLTAVVDETMEDGNKYVTFYYDTETLYEKLDEFGKMPLPPYITKQLEDQSQ----Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ + ++G+ + VTLHVG GTF PV+ ++ DH M
Sbjct: 166 QTVYAKELGSAAAPTAGLHFTPELMDTIRAMGVGIAEVTLHVGLGTFRPVQEDEISDHKM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA+ + K+ G R+++VGTTS R LE A + G I SG T+IF+ PG
Sbjct: 226 HSEWYSISEETARRIRETKAAGHRVIAVGTTSCRTLEAAAAKYGEIKACSGNTSIFLYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F +D L++NFHLP+STL+MLVSA G E+T Y+ A++ YRF+S+GD L+
Sbjct: 286 VKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMHAYEVAVAEKYRFFSFGDAMLI 341
>gi|117621432|ref|YP_856270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|166216695|sp|A0KJ19|QUEA_AERHH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|117562839|gb|ABK39787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 355
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 134/364 (36%), Positives = 202/364 (55%), Gaps = 16/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + D+ LN D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPMTERTASRLLQLDGQTGA---LRHGQFVDVLDQLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEVLVERMLDEHSVLAHVRSSKSPKPGTRLILDGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++EA + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 ADGEKVEAEMRARHDALFEIHFLDPRP--VLEILEAIGHMPLPPYI--DRPDEDADKERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 169 QTVYNQKPGAVAAPTAGLHFDEPLLEKIRAKGVETAFVTLHVGAGTFQPVRVDKIEDHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
HSE + A+ + ++RGGR+++VGTTS+R LE+A + + P+ T+IF
Sbjct: 229 HSEYAEVPQEVVDAIAATRARGGRVIAVGTTSVRSLESAAKVTLAQGKPLAPFFSDTDIF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD +
Sbjct: 289 IFPGYQFQVVDAMVTNFHLPESTLIMLVSAFAGYDNVMSAYQAAVAEQYRFFSYGDAMFV 348
Query: 357 FQKR 360
++R
Sbjct: 349 TRRR 352
>gi|225627567|ref|ZP_03785604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti str. Cudo]
gi|260168801|ref|ZP_05755612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. F5/99]
gi|261758283|ref|ZP_06001992.1| queuosine biosynthesis protein [Brucella sp. F5/99]
gi|225617572|gb|EEH14617.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti str. Cudo]
gi|261738267|gb|EEY26263.1| queuosine biosynthesis protein [Brucella sp. F5/99]
Length = 363
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 208/361 (57%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RI LRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERITLRPVEPRDHAKLLHVRPG----EPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|295695631|ref|YP_003588869.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Bacillus
tusciae DSM 2912]
gi|295411233|gb|ADG05725.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Bacillus
tusciae DSM 2912]
Length = 346
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 208/357 (58%), Gaps = 14/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FD+DLPP RIA P R ++RL+V++ + + DL + DA++
Sbjct: 1 MRVEDFDYDLPPDRIAQVPSADRTASRLLVLYRDSG---RMEHRHFRDLVDYAVPGDALI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L GV+ + E + P+ W V +P + + G L F
Sbjct: 58 LNDTRVIPARLLGVKAGGGGQVECLLLRRDDPEQDPDLWRVLVKPGRRVHPGHRLVF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G LEA V+D G L+ F +G + E + +G +PLPPYI +R Y
Sbjct: 115 -GDGALEAEVLDTTEEGGRLVRFRYTG-DWEDLLKRLGEMPLPPYIKERRADSG----RY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA++ GSVAAPTAGLHFT LL +L G++V +TLHVG GTF PV+V ++H M
Sbjct: 169 QTVYARVPGSVAAPTAGLHFTEELLEQLRDRGMEVGTITLHVGLGTFRPVQVARVEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I + TA+ ++ V+ RGGRI +VGTT R LE+A P G+T++FI PG
Sbjct: 229 HAEYFRIPSETAELVSRVRERGGRIWAVGTTVCRALESAALRG--WGPREGWTDLFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ FR VD L++NFHLPKSTLLMLVSA G E+ YQ AI YRF+S+GD L+
Sbjct: 287 FSFRVVDRLITNFHLPKSTLLMLVSALAGREQILGAYQEAIEKGYRFFSFGDAMLIT 343
>gi|314938950|ref|ZP_07846215.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a04]
gi|314948207|ref|ZP_07851601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0082]
gi|314951567|ref|ZP_07854613.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133A]
gi|313596261|gb|EFR75106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133A]
gi|313641659|gb|EFS06239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a04]
gi|313645340|gb|EFS09920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0082]
Length = 347
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 147/355 (41%), Positives = 203/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V N
Sbjct: 8 TEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMEDKHFHEIIEELQPGDALVMN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 65 NTRVLPARLYGEKP----DTGAHLEVLLLTNTQGDTWETLIKPAKRAKVGTRISF----G 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI + +G +PLPPYI + YQT
Sbjct: 117 DGRLQAVVKEELEHGGRIIDFEYEGI-FLEILESLGEMPLPPYIKERLED----PDRYQT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H MHS
Sbjct: 172 VYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 232 EFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITPGY 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 292 EFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGDAMFV 346
>gi|146318286|ref|YP_001197998.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 05ZYH33]
gi|146320479|ref|YP_001200190.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 98HAH33]
gi|145689092|gb|ABP89598.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 05ZYH33]
gi|145691285|gb|ABP91790.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 98HAH33]
gi|292558081|gb|ADE31082.1| Queuosine biosynthesis protein [Streptococcus suis GZ1]
Length = 344
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 3 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKRS---MVDSHFDHIIDQLNPGDALV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 60 MNNTRVLPARLYGYKP----ETMGHVELLLLKNTQGDQWEVLAKPAKRLKVGTTVAF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 113 -GDGRLTATIVEELEHGGRIVEFSYEGI-FLEVLESLGEMPLPPYIHEKLED----RERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 167 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 227 HSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLQADSGWTNIFIKP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD +
Sbjct: 287 GYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGDAMFI 343
>gi|325293064|ref|YP_004278928.1| S-adenosylmethionine tRNA ribosyltransferase [Agrobacterium sp.
H13-3]
gi|325060917|gb|ADY64608.1| S-adenosylmethionine tRNA ribosyltransferase [Agrobacterium sp.
H13-3]
Length = 374
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 223/363 (61%), Positives = 265/363 (73%), Gaps = 8/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSARL+VV PN + D +VSDL +FL DA+V
Sbjct: 15 MRVDLFDFDLPEANIALRPANPRDSARLLVVDPN---ADHMEDRIVSDLTSFLKPGDALV 71
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL GVR E +S TLHMR + W +ARP K IK+GD + F +
Sbjct: 72 FNDTRVIPAQLEGVRLREGAP-ETAVSATLHMRADQSRWKAFARPGKRIKQGDRIRFGYE 130
Query: 121 D----GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G + LEATV +K GEI L+F +SG L+ I+ VG IPLPPYIA KRP DA+D
Sbjct: 131 RDNACGLAHLEATVEEKGEEGEITLLFDVSGPVLDEAIASVGHIPLPPYIAAKRPEDAQD 190
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGTF+PVK +DTD
Sbjct: 191 QTDYQTIYAREKGAVAAPTAGLHFTPDLFAALDEAGIERHFVTLHVGAGTFLPVKADDTD 250
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH EIG + TA LN+VK+RGGRIVSVGTTSLRL+E+AT E+G+I PWSG T IF
Sbjct: 251 DHKMHFEIGHVSQETAAKLNAVKARGGRIVSVGTTSLRLIESATDENGVIQPWSGATGIF 310
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVDILM+NFHLPKSTL MLVSAFCG+E + Y HAI YRFYSYGD+SLL
Sbjct: 311 ITPGYRFRAVDILMTNFHLPKSTLFMLVSAFCGLETMRAAYAHAIETGYRFYSYGDSSLL 370
Query: 357 FQK 359
F+K
Sbjct: 371 FRK 373
>gi|224543527|ref|ZP_03684066.1| hypothetical protein CATMIT_02736 [Catenibacterium mitsuokai DSM
15897]
gi|224523554|gb|EEF92659.1| hypothetical protein CATMIT_02736 [Catenibacterium mitsuokai DSM
15897]
Length = 350
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 193/356 (54%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FD++LP IA P+ RD++RLMV+ + D+ +L D +V
Sbjct: 10 MDIELFDYNLPEELIAQTPLKKRDTSRLMVLDKETGN---VEHKHFYDILDYLKPGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G++ + L + + W +K++K G ++ F
Sbjct: 67 RNNTKVIPARLYGLK----EETGGHVEVLLLKDLHDDLWECLVGNAKIVKLGTVITF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A + G + GI + +G +PLPPYI K Y
Sbjct: 120 -GDGRLKAQCTEIREEGIRIFKMIYDGI-FYEILDQLGIMPLPPYIKEKLND----PDRY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK++GS AAPTAGLHFT LL ++ G+++ VTLHVG GTF PVKVE+ +H M
Sbjct: 174 QTVYAKVEGSAAAPTAGLHFTEELLQKVREKGVEILDVTLHVGLGTFRPVKVENVLEHHM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+ LN K G RI++VGTTS R LE ++ G TNIFI PG
Sbjct: 234 HSEYYEISEEVAEKLNQAKKEGRRIIAVGTTSCRTLEANHSKYGCFKAAHENTNIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F +D L++NFHLPKSTL+MLVSA G E Y+ A++ YRF+S+GD +
Sbjct: 294 YTFTGIDALITNFHLPKSTLVMLVSALAGREHILNAYKIAVNEKYRFFSFGDAMFI 349
>gi|325567162|ref|ZP_08143829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus casseliflavus ATCC 12755]
gi|325158595|gb|EGC70741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus casseliflavus ATCC 12755]
Length = 343
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 149/355 (41%), Positives = 206/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDF+LP IA P+ R S+RL+VV D ++ L DA+V N
Sbjct: 4 TEDFDFELPEELIAQTPLSDRSSSRLLVVDRETG---KFEDKHFYNIIDELEPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + + L + ++W +P+K K G + F G
Sbjct: 61 DTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RLEA V ++ + G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLEAVVEEELDHGGRIIRFQYKGI-FLEILESLGEMPLPPYIKERLED----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH MHS
Sbjct: 168 VYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 288 QFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|299822808|ref|ZP_07054694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
grayi DSM 20601]
gi|299816337|gb|EFI83575.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
grayi DSM 20601]
Length = 342
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R ++RLMV++ I D + + +L DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTASRLMVLNKETGA---IDDKHFASIVDYLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G++ I L + + N W +P+K I+ G + F
Sbjct: 58 LNNTRVLPARLHGLKD----ETGAHIEVLLLKQKADNEWETLVKPAKRIRVGQTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G +L F GI + +G +PLPPYI + Y
Sbjct: 111 -GNGELKAVCKEELEHGGRILEFHYEGI-FYEVLENLGEMPLPPYIKEQLEDQG----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+KV F+TLHVG GTF PV V DTD+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEALLDQIREKGVKVIFLTLHVGLGTFRPVDVADTDNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A L+ VK+ G RI++VGTTS+R LET A+ +G + SG+T+IFI+P
Sbjct: 225 HSEFYRLTKEAAAELSEVKAAGKRIIAVGTTSIRTLETIASRNNGALVEESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+AVD L++NFHLPKSTL+MLVSA + Y+HA+ + YRF+S+GD +
Sbjct: 285 GFTFQAVDALITNFHLPKSTLIMLVSALSNRDIILHAYRHAVENRYRFFSFGDAMFI 341
>gi|270290975|ref|ZP_06197198.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici 7_4]
gi|270280371|gb|EFA26206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici 7_4]
Length = 344
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 140/355 (39%), Positives = 204/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++F++DLP IA P+ RD++R++V+ ++D D+ LN DAIV N
Sbjct: 5 TEDFNYDLPHELIAQTPIKKRDASRMLVLDHKTG---EMADKHFYDIVDQLNPGDAIVMN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+++V+ A++ GV+ + L + + W +P++ K G + F G
Sbjct: 62 DSRVMPARIYGVK----EETGGHLEVLLLHNIEGDRWETLVKPARRAKVGTKITF----G 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L ATV + + G + F GI + +G +PLPPYI K YQT
Sbjct: 114 DGSLTATVKKELDHGGREIEFEYDGI-FMEILEKLGEMPLPPYIKEKLDD----PERYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ +DH MHS
Sbjct: 169 VYSKEPGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVDEENIEDHKMHS 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + +A LN V+ GGRI++ GTTS+R LET T+ +G I P SG+T+IFI PGY
Sbjct: 229 EFYRLSEESAATLNEVRKNGGRIIATGTTSIRTLETIGTKFNGEIKPDSGWTDIFIKPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ VD ++NFHLPKSTL+MLV+AF G E Y+HA+ YRF+S+GD +
Sbjct: 289 EWKVVDAFITNFHLPKSTLVMLVAAFTGRETILNAYKHAVEEKYRFFSFGDAMFI 343
>gi|320546395|ref|ZP_08040710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equinus ATCC 9812]
gi|320448780|gb|EFW89508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equinus ATCC 9812]
Length = 342
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+V+ N + D + LN DA+V
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDRNT---HEMVDAHFDHILDELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEKP----ETHGHVELLLLKNTEGDKWEVLAKPAKRLRVGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELDNGGRIVEFDYGGI-FLEVLESLGEMPLPPYIHEKLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ +VTLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIEAKGVKLVYVTLHVGLGTFRPVSVDNVEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGRIV+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYRLSEEAAQTLRDVKATGGRIVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD +
Sbjct: 285 GYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDERYRFFSFGDAMFV 341
>gi|228475167|ref|ZP_04059893.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis SK119]
gi|314936247|ref|ZP_07843594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis subsp. hominis C80]
gi|228270778|gb|EEK12180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis SK119]
gi|313654866|gb|EFS18611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis subsp. hominis C80]
Length = 341
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+ LP S IA P+ RD +RL+V+ I+ +D+ + + D +V
Sbjct: 1 MNVEEFDYHLPESLIAQTPLKNRDQSRLLVLGRKTGN---IAHKHFTDIMDYFETGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + R+ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTRIEDNDWEVLLKPAKRIKVGNTLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + G ++ GI LE ++ +G +PLPPYI + Y
Sbjct: 111 -GNGKIIAECIKELEQGGRIMRLHFEGI-LEERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + F+TLHVG GTF PV VED +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTDELLQKIKDKGVNIAFITLHVGLGTFRPVSVEDINDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTKETADILNKTKENGHRIISVGTTSTRTLETIRRDHEQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYKEAVKLKYRFFSFGDAMLII 341
>gi|304385246|ref|ZP_07367591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici DSM 20284]
gi|304328453|gb|EFL95674.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici DSM 20284]
Length = 347
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 140/355 (39%), Positives = 204/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++F++DLP IA P+ RD++R++V+ ++D D+ LN DAIV N
Sbjct: 8 TEDFNYDLPHELIAQTPIKKRDASRMLVLDHKTG---EMADKHFYDIVDQLNPGDAIVMN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+++V+ A++ GV+ + L + + W +P++ K G + F G
Sbjct: 65 DSRVMPARIYGVK----EETGGHLEVLLLHNIEGDRWETLVKPARRAKVGTKITF----G 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L ATV + + G + F GI + +G +PLPPYI K YQT
Sbjct: 117 DGSLTATVKKELDHGGREIEFEYDGI-FMEILEKLGEMPLPPYIKEKLDD----PERYQT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ +DH MHS
Sbjct: 172 VYSKEPGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVDEENIEDHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + +A LN V+ GGRI++ GTTS+R LET T+ +G I P SG+T+IFI PGY
Sbjct: 232 EFYRLSEESAATLNEVRKNGGRIIATGTTSIRTLETIGTKFNGEIKPDSGWTDIFIKPGY 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ VD ++NFHLPKSTL+MLV+AF G E Y+HA+ YRF+S+GD +
Sbjct: 292 EWKVVDAFITNFHLPKSTLVMLVAAFTGRETILNAYKHAVEEKYRFFSFGDAMFI 346
>gi|90419655|ref|ZP_01227565.1| S-adenosylmethionine, tRNA ribosyltransferase-isomerase
[Aurantimonas manganoxydans SI85-9A1]
gi|90336592|gb|EAS50333.1| S-adenosylmethionine, tRNA ribosyltransferase-isomerase
[Aurantimonas manganoxydans SI85-9A1]
Length = 363
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 203/364 (55%), Positives = 246/364 (67%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LPP RIALRPV PR+SARL+ V P ++D V DLP+ L D +V
Sbjct: 1 MRVDLFDFELPPERIALRPVSPRESARLLCVDPARG----LADQTVGDLPSLLTPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRRE---KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL G+R + +IS TLHMR +P+ W + RP K +K GD + F
Sbjct: 57 FNDTKVIPAQLEGLRRRPGSVDGEGVAQISATLHMREAPDRWLAFVRPGKRVKVGDRIAF 116
Query: 118 FSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
LEATV + GE L F +SG L+ I+ VG IPLPPYIA KRP D+
Sbjct: 117 GHGGNACLAGTLEATVETRGEGGEASLRFDLSGPALDEAIAAVGHIPLPPYIASKRPDDS 176
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+D DYQT YA+ G+VAAPTAGLHFT +L +RL + I ++TLHVGAGTF+PVK ED
Sbjct: 177 QDRSDYQTVYAREDGAVAAPTAGLHFTPDLFARLAARDIAAEYLTLHVGAGTFLPVKAED 236
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
T DH MHSEIG + +A+ LN+ + G RIVSVGTTSLRLLE+A DG I P+SG T+
Sbjct: 237 TADHRMHSEIGRVTEESAERLNAARREGRRIVSVGTTSLRLLESAADADGTIRPFSGPTD 296
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGYRFRAVD LM+NFHLP+STL MLVSAF GI+ K Y HAI + YRFYSYGD
Sbjct: 297 IFITPGYRFRAVDRLMTNFHLPRSTLFMLVSAFSGIDTMKSAYAHAIGNEYRFYSYGDAC 356
Query: 355 LLFQ 358
LL +
Sbjct: 357 LLDR 360
>gi|281492155|ref|YP_003354135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis KF147]
gi|281375826|gb|ADA65320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis KF147]
Length = 345
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 145/361 (40%), Positives = 209/361 (57%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ R +RL+++ P + D ++ L + DA+V
Sbjct: 1 MNINDFDFDLPEELIAQTPLEKRSESRLLILDPKT---EELEDRHFYNIIDELETGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 58 LNNTRVLPARLHGER----AETGGHIELLLLKDMGQNRWETLAKPARKMKVGEEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V++ + G ++ F +GI + +G +PLPPYI + Y
Sbjct: 111 -GDGRLKAVVVEVLDHGGRIVEFKYNGI-FLEILESLGEMPLPPYIHEQLEDQ----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK+ G +IV+ GTTS+R LET ++ DG I SG+T+IFI P
Sbjct: 225 HSEFYRLTEEAAAQLRAVKASGHKIVASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++ VD +NFHLPKSTL+MLV+AF G + YQHAI YRF+S+GD + K
Sbjct: 285 GYEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLDAYQHAIDEKYRFFSFGDAMFVRPK 344
Query: 360 R 360
+
Sbjct: 345 K 345
>gi|291459918|ref|ZP_06599308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sp. oral taxon 078 str. F0262]
gi|291417259|gb|EFE90978.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sp. oral taxon 078 str. F0262]
Length = 341
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 202/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F F+LP +A P+ R S+RL+V+ ++ ++ + D +V
Sbjct: 1 MDTKDFYFELPKELVAQDPLEDRASSRLLVMDRRSG---RLTHRHFYEITDYFRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R ++ L R + + W RP K +++G + F
Sbjct: 58 LNDTKVIPARLLGCREGG----GAKVELLLLKRETKDEWECLVRPGKKLREGARVEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++ G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GGGILRAEILRTAEDGSRVVRFFYEGI-FEEVLDRLGEMPLPPYITHKLQD----RSRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YAK GS AAPTAGLH+T LL R+ +G+++ +TLHVG GTF PVK E ++H M
Sbjct: 165 NTVYAKHDGSAAAPTAGLHWTKPLLERVEEMGVEIARLTLHVGLGTFRPVKAERLEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+ +N KS+GGR++ GTTS R +E+A EDG I SG+T+IFI PG
Sbjct: 225 HSEYYRIPKSEAEKMNRCKSKGGRLICTGTTSCRSIESAAEEDGRIPARSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRFRA+D L++NFHLP+STL+MLVSAF G E K Y A+ YRF+S+GD L+
Sbjct: 285 YRFRAMDGLITNFHLPESTLVMLVSAFAGREHILKAYAEAVRERYRFFSFGDAMLIL 341
>gi|257866741|ref|ZP_05646394.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC30]
gi|257872742|ref|ZP_05652395.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC10]
gi|257800699|gb|EEV29727.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC30]
gi|257806906|gb|EEV35728.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC10]
Length = 343
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 150/355 (42%), Positives = 206/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+VV D ++ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLSDRSSSRLLVVDRETG---KFEDKHFYNIIDELAPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + + L + ++W +P+K K G + F G
Sbjct: 61 DTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RLEA V ++ + G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLEAVVEEELDHGGRIIRFQYKGI-FLEILESLGEMPLPPYIKERLED----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH MHS
Sbjct: 168 VYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 288 QFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|229553782|ref|ZP_04442507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus rhamnosus LMS2-1]
gi|229312856|gb|EEN78829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus rhamnosus LMS2-1]
gi|259649097|dbj|BAI41259.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Lactobacillus rhamnosus GG]
Length = 361
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 202/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + + D D+ + DA+V
Sbjct: 21 QLSDFDYDLPHELIAQTPLKERDASRLLVLNADTGA---MQDKHFYDILDYFKPGDALVM 77
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 78 NDTRVMPARLYGVKP----ETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 129
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+ATV + G ++ F GI + +G PLPPYI K YQ
Sbjct: 130 GDGLLKATVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEKLED----PEMYQ 184
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 185 TVYSKELGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 244
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 245 SEFYRLTPEAAATLNEVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 304
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 305 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIEEKYRFFSFGDAMFIY 361
>gi|169333983|ref|ZP_02861176.1| hypothetical protein ANASTE_00375 [Anaerofustis stercorihominis DSM
17244]
gi|169258700|gb|EDS72666.1| hypothetical protein ANASTE_00375 [Anaerofustis stercorihominis DSM
17244]
Length = 340
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA P+ RD++RLMVV + I DL +LN D +V
Sbjct: 1 MKTSDFDYNLPEELIAQTPIEKRDTSRLMVVDRDT---KKIKHKHFYDLIEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KV A+L GV+ +I + ++ N + V +P+K +K G ++ F
Sbjct: 58 LNDSKVFHARLYGVK----EETGAKIETFVLKPLADNMFEVMIKPAKRLKVGSVVKF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V++K+ G + F ++ I +GT+PLPPYI K D Y
Sbjct: 111 --DENLSMEVLEKYEEGLAKVRFF-GCSDVFSYIDKIGTVPLPPYIKEKLDDD----ERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT+ LL ++ GI + +VTLHVG GTF PVK ++ +H M
Sbjct: 164 QTVYSKDKGSAAAPTAGLHFTNELLEKIKQKGINICYVTLHVGLGTFRPVKEDEITNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA+ +N K G I +VGTT++R LE+ + G I + TNIFI PG
Sbjct: 224 HSEFFIISNDTAKMINETKKNGKDIYAVGTTTVRTLESCYQKYGDIRATNMDTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTLLML+SAF ++ K Y+ AI YRF+S+GD L+
Sbjct: 284 FEFKAIDHLITNFHLPKSTLLMLISAFYNKDDILKAYKEAIKERYRFFSFGDAMLIL 340
>gi|299144018|ref|ZP_07037098.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518503|gb|EFI42242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 340
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+++LP IA P+ RD +RL+V++ I D+ +L + D +V
Sbjct: 1 MKTRDFNYELPKELIAQHPLENRDYSRLLVLNRLTGD---IVHKHFYDIYDYLKTGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A++ G R R++ I L ++ ++W +P K K G + F
Sbjct: 58 LNNTRVMPARIFGSRI----DRQEHIEFLLLKKIEKDTWECLCKPGKKAKVGTKIFFSE- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL ++D G ++ F GI E + +G +PLPPYI K Y
Sbjct: 113 ----RLNGEIVDVLEDGNRIIKFIYEGI-FEEILDELGEMPLPPYITEKLED----RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT LL +L G+K+ +VTLHVG GTF PVK +D +H M
Sbjct: 164 QTVYSKIDGSAAAPTAGLHFTKELLEKLEDKGVKIVYVTLHVGLGTFRPVKSDDIFNHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K RIV+VGTTS+R LE+ + G++ +G+T+IFI PG
Sbjct: 224 HSEYYEICKDTADEINKAKIENRRIVAVGTTSIRTLESCADDKGMVKESNGWTDIFIHPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLP+STL+MLVSAF Y+ A+ YRF+S+GD ++
Sbjct: 284 YKFKCVDALITNFHLPESTLVMLVSAFATRSMILNTYEIAVKEKYRFFSFGDAMFIY 340
>gi|239616653|ref|YP_002939975.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kosmotoga
olearia TBF 19.5.1]
gi|239505484|gb|ACR78971.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kosmotoga
olearia TBF 19.5.1]
Length = 340
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 204/358 (56%), Gaps = 21/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD +RLMV+ + + +L D +V
Sbjct: 3 MKVSDFDYELPKELIAQEPVQPRDHSRLMVIRRDR---ENFEHTHFYRIIDYLEPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ L +V W RP IK+G++L F
Sbjct: 60 MNDSKVIPARLLGKKS-----TGAKVEIVLIEKVGSKQWKAIVRPGSKIKRGNVLLFED- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ V++ + +L F +G +I +G +P+PPYI++ D Y
Sbjct: 114 -----LQCEVVEHCDDSTRILEF--TGSNPWEKIRRIGKLPIPPYISKY----PDDPNLY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT +LL +L GIK+ FVTLHVG GTF PVKVE+ +DH+M
Sbjct: 163 QTVYAKKDGSVAAPTAGLHFTDSLLKKLKEKGIKMAFVTLHVGLGTFRPVKVENVEDHVM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + T + + K G R+++VGTT +R LE A DG + SG T+IFI P
Sbjct: 223 HSEYYTLPEETVELIKETKRNGNRVIAVGTTVVRTLEAVAQKHDGKLVAESGRTDIFIYP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLPKSTLLMLV+AF G E+ K Y AI YRF+S+GD ++
Sbjct: 283 PYEFKVIDGLITNFHLPKSTLLMLVAAFTGREKILKAYNEAIKLRYRFFSFGDACFIY 340
>gi|158423932|ref|YP_001525224.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azorhizobium caulinodans ORS 571]
gi|172047956|sp|A8I5Q2|QUEA_AZOC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|158330821|dbj|BAF88306.1| S-adenosylmethionine [Azorhizobium caulinodans ORS 571]
Length = 354
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 188/358 (52%), Positives = 248/358 (69%), Gaps = 4/358 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PR+SARL+ V P + D ++DLP L DA+V
Sbjct: 1 MRVDAFDFDLPPERIALRPAEPRESARLLRVRP--GAAPELEDRTIADLPDLLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L+G R I TL R+S ++W+ +A+P+K + G+ + F
Sbjct: 59 VNDTKVIPARLDGTRTRAGGSTVA-IEATLIRRLSGSAWAAFAKPAKRLAVGETVVFAGA 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G LEA V+DK +GE+ F++SG EL+ I +G +PLPPYIA KRP D RD DY
Sbjct: 118 SG-GTLEARVLDKLESGEVHFAFALSGPELDAAIDAIGHMPLPPYIAAKRPEDDRDRTDY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q +A+++GSVAAPTA LHFT +LL+++ + G+ Y VTLHVGAGTF+PVK EDT DH M
Sbjct: 177 QPVFARVEGSVAAPTASLHFTPDLLAKIAARGVSRYTVTLHVGAGTFLPVKAEDTTDHQM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA LN+VK+RGGRI++VG+T+ RL+ETA T +G I P+ G T+IFITPG
Sbjct: 237 HAEWGEVSPETAAELNAVKARGGRIITVGSTATRLIETAATPEGSIRPYLGETDIFITPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FRA D++++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL +
Sbjct: 297 YAFRASDVMLTNFHLPRSTLVMLVAAFVGHETQKRAYAHAIASGYRFYSYGDACLLER 354
>gi|315645788|ref|ZP_07898909.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus vortex V453]
gi|315278549|gb|EFU41863.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus vortex V453]
Length = 343
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 206/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ I+ +D+ LN+ D +V
Sbjct: 1 MNVDLYDFELPEQLIAQTPLLDRSSSRLLTLNKESG---QINHQTFADIIDSLNAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEK----EDTGAKAEVLLLKSMGQDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYIKEKLDD----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDVVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG--IINPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ + SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQMNGEPLRESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E K Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMKAYKEAVEDKYRFFSFGDAMFIY 343
>gi|257870720|ref|ZP_05650373.1| queuosine biosynthesis protein [Enterococcus gallinarum EG2]
gi|257804884|gb|EEV33706.1| queuosine biosynthesis protein [Enterococcus gallinarum EG2]
Length = 343
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 152/355 (42%), Positives = 205/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDF+LP IA P+ R S+RL+VV + D D+ L DA+V N
Sbjct: 4 TEDFDFELPEELIAQTPLSDRSSSRLLVVDRESGA---MEDKRFYDIIDELAPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + + L + +SW +P+K K G + F G
Sbjct: 61 DTRVLPARIYGEKI----ETGAHLEILLLNNIEGDSWETLIKPAKRAKVGTKITF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RLEA V + G ++ FS GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLEAVVEKELEHGGRIIRFSYDGI-FLEILESLGEMPLPPYIKERLED----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV V++ DH MHS
Sbjct: 168 VYAKENGSAAAPTAGLHFTPELLKKIADKGVKLVYLTLHVGLGTFRPVSVDNIADHEMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAAQLNDVRANGGKIVAVGTTSIRTLETIGTKFDGDIKADSGWTSIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V +NFHLPKSTL+MLVSAF G + T + YQHAI YRF+S+GD L
Sbjct: 288 QFKVVQAFSTNFHLPKSTLVMLVSAFAGRDLTLEAYQHAIDERYRFFSFGDAMFL 342
>gi|226311457|ref|YP_002771351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevibacillus brevis NBRC 100599]
gi|254764267|sp|C0ZAN8|QUEA_BREBN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226094405|dbj|BAH42847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevibacillus brevis NBRC 100599]
Length = 342
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 137/358 (38%), Positives = 197/358 (55%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RL+V+ I + L L + D +V
Sbjct: 1 MDVQQFDFDLPEHLIAQHPLEDRTSSRLLVLEKQTGN---IVHQQFTHLIDHLQAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G + +I L + + W +P K +K G + F
Sbjct: 58 MNDSRVLPARLIGEK----TDTGAKIEILLLKSLGEDRWETLVKPGKRMKPGTEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L D TG ++ F GI + +G++PLPPYI + Y
Sbjct: 111 -GNGLLRCVCEDVTETGGRIVRFLYEGI-FYEILDQLGSMPLPPYIHAQLEDS----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT L ++ + G+++ +VTLHVG GTF PV + ++H+M
Sbjct: 165 QTVYAKERGSAAAPTAGLHFTKPYLEQIAAKGVQLAYVTLHVGLGTFRPVSADSVEEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITP 299
H+E I T + +N K+ G R+++VGTTS R LET G + SG+T+IFI P
Sbjct: 225 HAEYYEIPEETVELVNQAKAEGRRVIAVGTTSCRTLETVGRANGGKLVATSGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F +D L++NFHLPKSTL+MLVSA G E + Y+ A+ YRF+S+GD L+
Sbjct: 285 GYTFSILDGLLTNFHLPKSTLVMLVSALAGKENVMRAYKRAVEEEYRFFSFGDAMLIL 342
>gi|160945180|ref|ZP_02092406.1| hypothetical protein FAEPRAM212_02699 [Faecalibacterium prausnitzii
M21/2]
gi|158442911|gb|EDP19916.1| hypothetical protein FAEPRAM212_02699 [Faecalibacterium prausnitzii
M21/2]
Length = 345
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 201/356 (56%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV+ I + DLP FL D +V
Sbjct: 4 MLKKDFWYDLPKELIAQEPASPRDAARLMVL---SQKDDSIQHKVFRDLPEFLEPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A++ GV+ L +V + W A+P K ++ G + F
Sbjct: 61 VNNSKVLPARIVGVK----QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V + G + F L ++ G +PLPPYI ++ ++ Y
Sbjct: 114 -GDGSLTAVVDETMEDGNKYVTFYYDTETLYEKLDEFGKMPLPPYITKQLEDQSQ----Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ + ++G+ + VTLHVG GTF PV+ ++ DH M
Sbjct: 169 QTVYAKELGSAAAPTAGLHFTPELMDTIRAMGVGIAEVTLHVGLGTFRPVQEDEISDHKM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA+ + K+ G R+++VGTTS R LE A + G I SG T+IF+ PG
Sbjct: 229 HSEWYSISEETARRIRETKAAGHRVIAVGTTSCRTLEAAAAKYGEIKACSGNTSIFLYPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F +D L++NFHLP+STL+MLVSA G E+T Y+ A++ YRF+S+GD L+
Sbjct: 289 VKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMHAYEVAVAEKYRFFSFGDAMLI 344
>gi|223044117|ref|ZP_03614156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus capitis SK14]
gi|222442511|gb|EEE48617.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus capitis SK14]
Length = 341
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+ LP S IA P+ RD +RL+V+ ++ D+ +LN D +V
Sbjct: 1 MNIEEFDYHLPESLIAQTPLKNRDQSRLLVLQRETG---KMTHLHFKDVIDYLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNRLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GDGKIVAECIKELEQGGRIMRLHYDGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNQIKQKGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K++G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNQTKAKGKRIISVGTTSTRTLETIRRDHEQFVEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSTRENILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|314933804|ref|ZP_07841169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus caprae C87]
gi|313653954|gb|EFS17711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus caprae C87]
Length = 341
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+ LP S IA P+ RD +RL+V+ ++ D+ +LN D +V
Sbjct: 1 MNIEEFDYHLPESLIAQTPLKNRDQSRLLVLQRETG---KMTHLHFKDVIDYLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNRLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GDGKIVAECIKELEQGGRIMRLHYDGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNQIKQKGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K++G RI+SVGTTS R LET SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNQTKAKGKRIISVGTTSTRTLETIRRGHEQFVEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSTRENILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|116252158|ref|YP_767996.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. viciae 3841]
gi|166216743|sp|Q1MGM3|QUEA_RHIL3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115256806|emb|CAK07896.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhizobium leguminosarum bv. viciae 3841]
Length = 361
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 212/362 (58%), Positives = 255/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+V+ PN +SDH V DL +FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVIDPN--AENSLSDHRVGDLTSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR SP+ W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRHRDGA-GGQQVSATLHMRTSPSRWKAFAKPGKRIKQGDRISFGHS 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K GE+ L+F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 118 GESCFLGSLDATVEEKGEAGEVTLLFDLSGPALDEAIAAVGHIPLPPYIAAKRPEDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 178 ADYQTIYAREEGAVAAPTAGLHFTPGLFEALDRAGIERHFVTLHVGAGTFLPVKADDTAD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E G++ A A LN+V+ RGGRIV VGTTSLRL+E+A E G I PW+G T IFI
Sbjct: 238 HKMHLESGYVSAEIAARLNAVRERGGRIVCVGTTSLRLIESAAEESGEIMPWAGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD SLLF
Sbjct: 298 TPGYRFKAVDMLMTNFHLPRSTLFMLVSAFAGFETMHAAYKHAISTGYRFYSYGDASLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|293567788|ref|ZP_06679129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1071]
gi|291589373|gb|EFF21180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1071]
Length = 343
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 147/355 (41%), Positives = 203/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMEDKHFHEIIEELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEKP----DTGAHLEVLLLTNTQGDTWETLIKPAKRAKVGTRISF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLQAVVKEELEHGGRIIDFEYEGI-FLEILESLGEMPLPPYIKERLED----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H MHS
Sbjct: 168 VYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIRADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 288 EFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGDAMFV 342
>gi|78044043|ref|YP_360348.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carboxydothermus hydrogenoformans Z-2901]
gi|91207417|sp|Q3ABY6|QUEA_CARHZ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77996158|gb|ABB15057.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carboxydothermus hydrogenoformans Z-2901]
Length = 338
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 198/357 (55%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+FD+ LP IA P+ RD +RL+V+ I+ + +L +L D +V
Sbjct: 1 MKLKDFDYYLPEELIAQTPLEKRDESRLLVLKRQTG---EITHDVFKNLKKYLVPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A+L GVR + E+ L R++ W V +P + + G L F
Sbjct: 58 VNKTRVIPARLFGVRE-----QGGEVEILLVKRMNFREWEVLVKPGRRARVGTRLIFAPG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ FS G+ E ++ +G PLPPYI K Y
Sbjct: 113 VLEGEIVAQTEV-----GRIIKFSFQGV-FEEILNQLGQTPLPPYIKEKLKD----PERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+S L G++ V LHVG GTF PVK E+ +H M
Sbjct: 163 QTIYAKEPGSAAAPTAGLHFTRELISELKDYGVEFAEVLLHVGLGTFKPVKTENILEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I+ A+ +N K G R+++VGTT +R+LE+ + G + P G+T++FI PG
Sbjct: 223 HEEYYEIENEAAEKVNKAKREGRRVIAVGTTVVRVLESVADK-GQVAPAKGYTDLFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ +D L++NFHLPKSTLLMLVSAF G E+ Y+ A+ YRF+S+GD L+
Sbjct: 282 FNFQIIDGLITNFHLPKSTLLMLVSAFAGREKVLNAYEIAVRLRYRFFSFGDAMLII 338
>gi|257876333|ref|ZP_05655986.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC20]
gi|257810499|gb|EEV39319.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC20]
Length = 343
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 149/355 (41%), Positives = 206/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDF+LP IA P+ R S+RL+VV D ++ L DA+V N
Sbjct: 4 TEDFDFELPEELIAQTPLSDRSSSRLLVVDRETG---KFEDKHFYNIIDELAPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + + L + ++W +P+K K G + F G
Sbjct: 61 DTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RLEA V ++ + G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLEAVVEEELDHGGRIIRFQYKGI-FLEILESLGEMPLPPYIKERLED----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH MHS
Sbjct: 168 VYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 288 QFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|199598074|ref|ZP_03211497.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus rhamnosus HN001]
gi|258507749|ref|YP_003170500.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus GG]
gi|258538939|ref|YP_003173438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus Lc 705]
gi|199591000|gb|EDY99083.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus rhamnosus HN001]
gi|257147676|emb|CAR86649.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus GG]
gi|257150615|emb|CAR89587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus Lc 705]
Length = 356
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 202/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + + D D+ + DA+V
Sbjct: 16 QLSDFDYDLPHELIAQTPLKERDASRLLVLNADTGA---MQDKHFYDILDYFKPGDALVM 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 73 NDTRVMPARLYGVKP----ETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 124
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+ATV + G ++ F GI + +G PLPPYI K YQ
Sbjct: 125 GDGLLKATVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEKLED----PEMYQ 179
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 180 TVYSKELGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 239
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 240 SEFYRLTPEAAATLNEVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 299
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 300 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIEEKYRFFSFGDAMFIY 356
>gi|261381310|ref|ZP_05985883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
subflava NJ9703]
gi|284795799|gb|EFC51146.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
subflava NJ9703]
Length = 342
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 1 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALP----TLPIEDKHFGDLPDYVAPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKAS-----GGKIEALIERVLDAHTALAHIRSSKSPKPGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ + + + + G +PLPPYI R D D Y
Sbjct: 109 --EGDIRAVMMERAEE--LFCLKFEGEQTVYELLEQNGHLPLPPYIE--RVADDEDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPAETVAAIEAAKARGNKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ YRF+SYGD +L
Sbjct: 283 YRFNVADRLITNFHLPKSTLLMLVSAFSGMEHIRSVYRHAVEQEYRFFSYGDAMIL 338
>gi|284048860|ref|YP_003399199.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidaminococcus fermentans DSM 20731]
gi|283953081|gb|ADB47884.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidaminococcus fermentans DSM 20731]
Length = 338
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 196/356 (55%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA PV PRDS+RL+V+ + +LP +L D +V
Sbjct: 1 MEVTDFDYDLPQELIAQTPVEPRDSSRLLVMDKKTG---ELEHRHFFNLPEYLKPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + + L R + W V +P K ++KG + F +
Sbjct: 58 FNDTRVIPARLHGFK-----TTGAHVEVFLLNRKNATDWEVLVKPGKKLQKGARIKFSDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++D + G + F GI E + +G PLPPYI K Y
Sbjct: 113 -----LSCEILDTTDFGGRIARFQYDGI-FEEILDRLGETPLPPYIHEKLED----KERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT LL ++ +G++ FVTLHVG GTF PV +DH M
Sbjct: 163 QTVYNRERGSAAAPTAGLHFTRELLQKIRDMGVEEVFVTLHVGLGTFRPVNESRIEDHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A A+N K G RI++VGTTS+R LE+A G + +T+IFI PG
Sbjct: 223 HREFYTVSQEAADAINKAKREGRRIIAVGTTSVRTLESAGAS-GEMKAGGNWTSIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+FR VD L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD +
Sbjct: 282 YQFRFVDALVTNFHLPQSTLIMLVSALSTRENILHAYKVAVQEKYRFFSFGDAMFI 337
>gi|312897342|ref|ZP_07756768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
micronuciformis F0359]
gi|310621560|gb|EFQ05094.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
micronuciformis F0359]
Length = 341
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 203/356 (57%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +F ++LP IA P PRD+ARLM+ + + L L+ D +V
Sbjct: 3 LKLSDFSYELPQELIAQHPAEPRDTARLMLYDKKTGET---ENKIFRQLTDELHQGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN++KVI A+L+G R ++ L V + W V +P K G L F
Sbjct: 60 FNDSKVIPARLHGTRV----PTGGKVEVLLLTPVGEDRWEVLVKPGKKALPGSTLSFGE- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL V D+ + G ++ F+ G+ + I +G +PLPPYI +K + DY
Sbjct: 115 ----RLTGVVEDRTDYGGRVIHFTYDGV-FDHIIEEIGEMPLPPYIHKK----PENPDDY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL ++ G++ FVTLHVG GTF PV+ E+ +DH+M
Sbjct: 166 QTVYAREKGSAAAPTAGLHFTDELLEKIRDKGVETVFVTLHVGLGTFRPVEEENIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A A+N K G RIV+VGTTS+R LE+A E G + +G TNIFI PG
Sbjct: 226 HSEYYSITPEAAAAVNRAKEEGRRIVAVGTTSVRTLESAA-EKGRLKAGAGKTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FR VD L++NFHLP+STLLML+SA E K Y+ A+ YRF+S+GD +
Sbjct: 285 YTFRIVDALVTNFHLPESTLLMLISALSDREHILKAYETAVREKYRFFSFGDAMFI 340
>gi|315658090|ref|ZP_07910962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis M23590]
gi|315496419|gb|EFU84742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis M23590]
Length = 341
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 211/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V++ + D+ +LN D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLNKKTGD---MKHQHFKDVINYLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGVK----EETGAKVEMLMLTQIENNDWEVLLKPAKRIKVGNQLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I + + G ++ GI L+ ++ +G +PLPPYI D Y
Sbjct: 111 -GEGKIIAECIKELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIK----ARLDDPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT NLL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTDNLLKDIKAKGVNIAFITLHVGLGTFRPVSVENINEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TAQ LN+ K +G RI++VGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTENTAQLLNNTKLQGHRIIAVGTTSTRTLETIRRDHSQFIATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDALITNFHLPKSTLVMLVSAFSSRQFILTAYRKAVELEYRFFSFGDAMLII 341
>gi|307705266|ref|ZP_07642132.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK597]
gi|307621179|gb|EFO00250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK597]
Length = 342
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAVTLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|289450513|ref|YP_003475177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289185060|gb|ADC91485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 349
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P RD++RLM+V+P I S++ ++++ D +V
Sbjct: 1 MKTSDFYYELPKELIAQHPTAKRDNSRLMLVNPATQS---IGHTHFSEIINYIDAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ + L R + + W V RP + +++G ++ F
Sbjct: 58 LNNTKVIPARLLGVK----RDTGVHVEFLLLNRRADDEWEVIVRPGRRLRQGSVVDFMPG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A + + TG ++ F +GI E + GT+PLPPYI K Y
Sbjct: 114 E----LSAEITEVLPTGNRVVKFFFNGI-WEEILDKAGTMPLPPYIKEKLAD----PSRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YAK GS AAPTAGLHFT LL+ L + G+K+ +VTLHVG GTF PVK E+ +H M
Sbjct: 165 NTVYAKYDGSAAAPTAGLHFTPELLAALQAKGVKLAYVTLHVGLGTFRPVKAENIAEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TAQ +N VK+ G +I++VGTTS R +E+ +G + P +G+T+IFI PG
Sbjct: 225 HSEYYELPPETAQLINEVKASGHKIIAVGTTSTRTVESVYHNNGKVVPETGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F +D L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 FKFGVIDGLITNFHLPESTLMMLVSAIAGKDFIFSAYAEAVKEKYRFFSFGDAMFI 340
>gi|270292452|ref|ZP_06198663.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M143]
gi|270278431|gb|EFA24277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M143]
Length = 342
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 202/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EFQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSDEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|268611591|ref|ZP_06145318.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcus flavefaciens FD-1]
Length = 343
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 144/359 (40%), Positives = 198/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMV--KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
M + +F +DLP IA PV PR+++R+M V IS +L L D
Sbjct: 1 MELLKSDFYYDLPEELIAQHPVEPRNASRMMCVDRRTG---EISHDHFYNLCDHLREGDL 57
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V N+++VI A+L G + + I L + W + RP K K G F
Sbjct: 58 LVMNDSRVIPARLYGEKVGNQTF----IEFLLLEQKGDKLWEIICRPGKKAKVGTKFSF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL A V++ + G ++ F G + VG +PLPPYI K +
Sbjct: 113 ---GGGRLVAEVVEVKDDGNRIVKFECEG-NFFTALEDVGQMPLPPYIKEK----LENKE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y++ GS AAPTAGLHFT +L L S GIK FVTLHVG GTF PVK ++ DH
Sbjct: 165 RYQTVYSRELGSAAAPTAGLHFTPEMLDDLRSRGIKTAFVTLHVGLGTFRPVKEDNVLDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + TA +N K+ GGR+++VGTT+ R LE+ T G I+ G+T+IFI
Sbjct: 225 KMHSEHYHLPQETADLINETKANGGRVIAVGTTTCRTLESVATFYGDISEHDGYTDIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F+ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+S+GD+ +
Sbjct: 285 PSYEFKCIDGLITNFHLPESTLIMLVSAFMGYDNTMNAYKTAVEEKYRFFSFGDSMCIL 343
>gi|241890140|ref|ZP_04777438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans ATCC 10379]
gi|241863762|gb|EER68146.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans ATCC 10379]
Length = 342
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF LP IA P+ RD+++L+ V + SD+ + N D +V
Sbjct: 1 MKLEQFDFYLPEELIAQTPLLKRDTSKLLCVDRKN---NSHEHKVFSDIIDYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L + N W +P+K IK+G I+ F
Sbjct: 58 LNNTRVMPARLYGAK----KDTGAAIEVLLLKNLGHNDWECLVKPAKRIKEGGIVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +EA + G F GI + ++ +GT+PLPPYI + Y
Sbjct: 111 -GDGIMEAVCTKVLDDGFRHFEFKYEGI-FQERLDELGTMPLPPYIKERLTD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ G+ + ++TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYSKEVGSSAAPTAGLHFTNELLEKIKEKGVNIAYLTLHVGLGTFRPVAVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE +D TA+ +N K GGR+ SVGTTS R LET A +G I SG+TNIFI P
Sbjct: 225 HSEYYTLDEDTARIINKTKEDGGRVFSVGTTSTRTLETIARDNNGKIVAASGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+ F+ VD L++NFHLPKS+L+MLVSAF E+ ++Y A+ + YRF+S+GD ++
Sbjct: 285 GFEFKCVDGLITNFHLPKSSLIMLVSAFYDREKVIELYNIAVENKYRFFSFGDAMIII 342
>gi|225023925|ref|ZP_03713117.1| hypothetical protein EIKCOROL_00791 [Eikenella corrodens ATCC
23834]
gi|224943399|gb|EEG24608.1| hypothetical protein EIKCOROL_00791 [Eikenella corrodens ATCC
23834]
Length = 343
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 207/358 (57%), Gaps = 19/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA +P R S+RL+ + ++ D L ++LP L + D +V
Sbjct: 1 MQLADFDFHLPEHLIAQQPPEQRGSSRLL----DARSGDLLCDRLFAELPNLLEAGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + + + R SK K G +L F
Sbjct: 57 FNNTKVMKARLFGHKAS-----GGRIEALIERVLDEHCALAHIRSSKSPKPGSLLEF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + ++ GE+ + + + + + G +PLPPYI R DA D Y
Sbjct: 109 --DGGIRAQMEER--EGELFKLRFSGSLNVYQILEQTGRLPLPPYIE--RAADAADDERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL++L + GI +TLHVGAGTF PV+ E+ +H M
Sbjct: 163 QTIYAKHQGAVAAPTAGLHFTPELLNQLQANGIHRAEITLHVGAGTFQPVRSENIVEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T +A+ K+ G R+ +VGTTS+R LE A ++ + G T+IFITPG
Sbjct: 223 HKEWYSIPTETVEAIAETKANGKRVWAVGTTSMRSLEAAA-QNSHLQAGEGDTDIFITPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF+ D L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 282 YRFQVADGLITNFHLPKSTLLMLVSAFSGVEHIRAAYRHAIEQQYRFFSYGDAMLLTR 339
>gi|302023597|ref|ZP_07248808.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis 05HAS68]
Length = 342
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKQS---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L N W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGYKP----ETMGHVELLLLKNTQGNQWEVLAKPAKRLKVGTTVAF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFSYEGI-FLEVLESLGEMPLPPYIHEKLED----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A AQ LN VK GRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYNLSAEAAQTLNQVKDSSGRIVAVGTTSIRTLETIGNKFDGRLEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD +
Sbjct: 285 GYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGDAMFI 341
>gi|315613447|ref|ZP_07888355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis ATCC 49296]
gi|315314443|gb|EFU62487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis ATCC 49296]
Length = 342
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + S G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQSKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFNGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|269215268|ref|ZP_05988032.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ATCC 23970]
gi|269207922|gb|EEZ74377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ATCC 23970]
Length = 356
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 208/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MSLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVTAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMILGR 350
>gi|147677366|ref|YP_001211581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pelotomaculum thermopropionicum SI]
gi|189038865|sp|A5D3G5|QUEA_PELTS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146273463|dbj|BAF59212.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Pelotomaculum thermopropionicum SI]
Length = 341
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 201/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P+ RD +RLMVV + L D+ +LN DA+V
Sbjct: 1 MNLSDFDYFLPDELIAQEPLPERDMSRLMVVRLD---GKEFEHRLFKDIVDYLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + I L R+ + W RP K KG + F
Sbjct: 58 INETKVIPARLVGRK----EGTGARIELLLLRRLDSSRWEALVRPGKKAPKGTAVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L ++D G ++ FS G+ E + VG +PLPPYI + Y
Sbjct: 111 -GEGLLACRILDSTAYGGRVVEFSFEGL-FEEVLERVGVMPLPPYIKKPLLDQ----QRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHF+ LLSR+ +G+ V V LHVG GTF PV+ ED H M
Sbjct: 165 QTIYARQAGSAAAPTAGLHFSPGLLSRIREMGVAVIPVLLHVGLGTFRPVRTEDIRRHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I ++A+ ++RGGR+++VGTT+ R LE+A E G + P SG+T IFI PG
Sbjct: 225 HAEYYEITEEASRAIAETRARGGRVIAVGTTTTRCLESAAEEGGRVRPGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLPKSTL+M+V+A G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKVIDGLVTNFHLPKSTLIMMVAALAGRERILAAYREAVGLRYRFFSFGDAMLII 341
>gi|322375519|ref|ZP_08050032.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C300]
gi|321279782|gb|EFX56822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C300]
Length = 342
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RDS++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDSSKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFNGQIQSDSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|15901270|ref|NP_345874.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TIGR4]
gi|111658609|ref|ZP_01409266.1| hypothetical protein SpneT_02000284 [Streptococcus pneumoniae
TIGR4]
gi|225860804|ref|YP_002742313.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Taiwan19F-14]
gi|298229585|ref|ZP_06963266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae str. Canada MDR_19F]
gi|298255442|ref|ZP_06979028.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502633|ref|YP_003724573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TCH8431/19A]
gi|21263901|sp|Q97Q15|QUEA_STRPN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|14972905|gb|AAK75514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TIGR4]
gi|225726590|gb|ACO22441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Taiwan19F-14]
gi|298238228|gb|ADI69359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TCH8431/19A]
Length = 342
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|313114158|ref|ZP_07799710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310623567|gb|EFQ06970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 342
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 199/357 (55%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRDSARLMV+ I + DLP FL D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPADPRDSARLMVL---SQKDDSIQHKIFHDLPEFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A++ GV+ L +V + W A+P K ++ G + F
Sbjct: 58 VNNSKVLPARIVGVK----QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V + G + F L ++ G +PLPPYI ++ ++ Y
Sbjct: 111 -GDGSLTAVVDETMEDGNKYVTFYYDTETLYEKLDEFGKMPLPPYITKQLEDQSQ----Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ + + G+ + VTLHVG GTF PV+ ++ DH M
Sbjct: 166 QTVYAKELGSAAAPTAGLHFTPELMDTIRAKGVNIAEVTLHVGLGTFRPVQEDEIADHKM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID TAQ + K+ G R+++VGTTS R LE + G I SG T+IF+ PG
Sbjct: 226 HSEWYCIDEKTAQMIRDTKAAGHRVIAVGTTSCRTLEAVAAKYGEIRACSGNTSIFLYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F +D L++NFHLP+STL+MLVSA G E+T Y+ A+ YRF+S+GD L+
Sbjct: 286 VKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMAAYKVAVEERYRFFSFGDAMLIL 342
>gi|168491320|ref|ZP_02715463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC0288-04]
gi|183574488|gb|EDT95016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC0288-04]
Length = 342
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|242373940|ref|ZP_04819514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W1]
gi|242348294|gb|EES39896.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W1]
Length = 347
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++EFD+ LP S IA P+ RD +RL+V+ ++ D+ +LN D +V
Sbjct: 7 LNIEEFDYHLPESLIAQTPLKNRDQSRLLVLQRETG---EMAHLHFKDVIDYLNPGDTLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 64 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNRLSF--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A + + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 117 -GDGKIVAECVKELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 171 QTVYAKESGSAAAPTAGLHFTEALLDQIKAKGVNITFITLHVGLGTFRPVSVDNIDDHEM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA+ LN ++ G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 231 HSEYYQMTSETAELLNQTRANGNRIISVGTTSTRTLETIRRDHEQFVEKSGWTDIFIYPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF + YQ A+ YRF+S+GD L+
Sbjct: 291 FEYKAIDGLITNFHLPKSTLVMLVSAFSTRDNILNAYQTAVEMKYRFFSFGDAMLII 347
>gi|167750837|ref|ZP_02422964.1| hypothetical protein EUBSIR_01820 [Eubacterium siraeum DSM 15702]
gi|167656272|gb|EDS00402.1| hypothetical protein EUBSIR_01820 [Eubacterium siraeum DSM 15702]
Length = 386
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 143/359 (39%), Positives = 200/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ +F +DLP IA P+ PRDS+RLM + I+ ++ +L D +V
Sbjct: 44 MLKSDFYYDLPQELIAQTPLEPRDSSRLMKIDRKSG---KITHDRFYNICDYLEKGDLLV 100
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KV A+L GV+ + L ++S N W V +P K +K G + F
Sbjct: 101 LNDSKVFPARLYGVK----QETGAAVQFLLLHQISHNRWEVMVKPGKRLKIGTKVDF--- 153
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A ++D G+ + F+ G + + +G +PLPPYI K Y
Sbjct: 154 --SGILTAEIVDYAEGGDRIAEFTYDGDSIFEVLDRIGQMPLPPYITEKLKD----KDRY 207
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T Y+ GS AAPTAGLHFT N+ ++L G+ FVTLHVG GTF PVK ++ DH M
Sbjct: 208 NTIYSHEVGSAAAPTAGLHFTENVFAKLREKGVDTAFVTLHVGLGTFRPVKEDNILDHKM 267
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H E I TA + + + RGGR++SVGTTS R LE+A + +G I S T IFI
Sbjct: 268 HVEHYSIPQETADKIKACRERGGRVISVGTTSCRTLESAASLDPNGEIKACSHDTGIFIY 327
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+A+D L++NFHLP+STL+MLVSAF G E+T Y AI YRF+S+GD+ ++
Sbjct: 328 PGYEFKAIDGLITNFHLPESTLIMLVSAFLGREKTLNAYNVAIQEKYRFFSFGDSMIII 386
>gi|251798373|ref|YP_003013104.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. JDR-2]
gi|247545999|gb|ACT03018.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. JDR-2]
Length = 348
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 149/360 (41%), Positives = 208/360 (57%), Gaps = 15/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ R ++RL+ ++ I+ +DL ++N+ D +V
Sbjct: 1 MNVDWFDFELPEHLIAQTPLADRTASRLLALNKETG---EIAHRTFTDLAEYMNAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS- 119
NNT+VI A+L GV+ +I L ++ + W A+P+K IK G L F
Sbjct: 58 LNNTRVIPARLTGVKP----DTGAKIELLLLKQLEGDRWETLAKPAKRIKVGSELWFGDN 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ L A V D+ + G + F GI + + +G +PLPPYI + +
Sbjct: 114 GSGEPLLRAIVEDEGDMGGRTIRFRYEGI-FQELLDRLGEMPLPPYIKER----LEERER 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK +GS AAPTAGLHFT L +L+ G+K+ ++TLHVG GTF P+ V+ ++H
Sbjct: 169 YQTVYAKHEGSAAAPTAGLHFTKEFLQQLVDKGVKLAYITLHVGLGTFRPMSVDKVEEHE 228
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGIINPWSGFTNIFI 297
MHSE +D A +N KS G RI++VGTTS R LE A E G I +G+T+IFI
Sbjct: 229 MHSEYYELDEQNAVIINEAKSSGARIIAVGTTSSRTLETVAARFEGGPIEACNGWTDIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLPKSTL+MLVSA G E K Y A+ YRF+S+GD ++
Sbjct: 289 FPGYNFKLVDALLTNFHLPKSTLVMLVSALAGREAIMKAYGEAVREEYRFFSFGDAMFIY 348
>gi|148985629|ref|ZP_01818783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP3-BS71]
gi|148993024|ref|ZP_01822618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP9-BS68]
gi|168489581|ref|ZP_02713780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP195]
gi|147922110|gb|EDK73232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP3-BS71]
gi|147928225|gb|EDK79242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP9-BS68]
gi|183571952|gb|EDT92480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP195]
gi|301800281|emb|CBW32901.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae OXC141]
gi|332073723|gb|EGI84202.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA17570]
Length = 342
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|309379474|emb|CBX21840.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 346
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MSLQDRVFGDLPDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGR 340
>gi|83952643|ref|ZP_00961373.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
nubinhibens ISM]
gi|83835778|gb|EAP75077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
nubinhibens ISM]
Length = 348
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 168/359 (46%), Positives = 230/359 (64%), Gaps = 11/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RPV PR +ARL+V I D V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEELIATRPVRPRPAARLLVAEG-----AAIRDAHVRDLGQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L+G+R + I TL W +P K +++G+++ F +
Sbjct: 56 LNDTKVIPARLSGLRHREGSEAGARIEVTLLEPDGQGQWGALIKPLKKLREGEVVAFAAG 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L AT++ K + G+ LL F++ G + + ++ G +PLPPYIA KRP DA+D+ DY
Sbjct: 116 -----LSATLVAK-SEGQGLLRFNLEGDDFDAALAEAGAMPLPPYIAAKRPADAQDHEDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHF LL+ L G+++ VTLHVGAGTF+PVKVED H M
Sbjct: 170 QTVFARNKGAVAAPTASLHFDEALLAALRGQGVEMTHVTLHVGAGTFLPVKVEDVTTHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + ++ GGRI+ VGTT+LRL+ETA+ E G I PW G T+IFI PG
Sbjct: 230 HAEWGEVSEKAAAEIAATRAAGGRIIPVGTTALRLIETASRETGEIAPWQGETDIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ FRA D LM+NFHLPKSTL+MLVSA G + ++Y+HAI+ YRF+SYGD SLL +
Sbjct: 290 FTFRATDALMTNFHLPKSTLMMLVSALMGKDRMARVYEHAIAEKYRFFSYGDASLLIPE 348
>gi|322382936|ref|ZP_08056768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321153056|gb|EFX45514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 364
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 146/370 (39%), Positives = 204/370 (55%), Gaps = 25/370 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF+LP IA P+ R +RLM ++ I H DL +L + D +V
Sbjct: 1 MDVESFDFELPEELIAQTPLSDRTQSRLMTLNKETG---EIGHHTFKDLADYLKAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF-- 118
N+T+VI A+L G++ ++ L + N W RP K IK G L F
Sbjct: 58 LNDTRVIPARLFGLK----KDTGAKVELLLLKDLGDNRWEALVRPGKKIKTGAELVFGTQ 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++ + L A V ++ G ++ FS GI + +G +PLPPYI +
Sbjct: 114 AEADEPVLSAIVEEEGEMGARIVRFSYRGI-FNEILDRLGEMPLPPYIKEQLND----RE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +AK GS AAPTAGLHFT L L G+++ F+TLHVG GTF PV V+ +DH
Sbjct: 169 RYQTVFAKHAGSAAAPTAGLHFTEEFLEGLRGQGVRIAFITLHVGLGTFRPVSVDRVEDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGII--------N 287
+H+E + TA+ +N +++GGR+++VGTTS R LETA G I +
Sbjct: 229 NIHAEYYILSEETARLVNETRAQGGRVIAVGTTSARTLETAAGLSHSQGYIDGEGRTLLH 288
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
SG+T+IFI PGY FRAVD L++NFHLPKSTLLMLVSA + Y A+ + YRF
Sbjct: 289 ACSGWTSIFIYPGYEFRAVDGLLTNFHLPKSTLLMLVSALASRKYILHAYAEAVKNRYRF 348
Query: 348 YSYGDTSLLF 357
+S+GD ++
Sbjct: 349 FSFGDAMFIY 358
>gi|304391768|ref|ZP_07373710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ahrensia
sp. R2A130]
gi|303295997|gb|EFL90355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ahrensia
sp. R2A130]
Length = 371
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 191/358 (53%), Positives = 251/358 (70%), Gaps = 8/358 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF+LP RIALRPV PRDSA+L+ ++ ++D +V++L L+ DA+V
Sbjct: 1 MKIDAFDFELPEERIALRPVNPRDSAKLLTIN--AGRDGELADRVVNELAELLSPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R E + TLHM +P++W + R +K +K G+++ F
Sbjct: 59 FNDTKVIPAQLEGIRRR--EDVEARVGLTLHMEEAPDTWRAFVRGAKKLKLGELVEFGGA 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A V++K + GEI+ F+ SG L ++ G IPLPPYIA KR D RD DY
Sbjct: 117 D----FTAEVLEKGDAGEIVFRFNRSGQALRDALAKRGHIPLPPYIALKRGEDERDRSDY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT L+++L + GI+ +FVTLHVGAGTF+PVKV+DTDDH+M
Sbjct: 173 QTIYARDEGAVAAPTAGLHFTDELMAKLDARGIERHFVTLHVGAGTFLPVKVDDTDDHVM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G + TA AL V+SRGG++V+VGTTSLRLLE+A E G + W G T+IFI PG
Sbjct: 233 HSERGIVTQETADALARVRSRGGKVVAVGTTSLRLLESAAQETGKVTAWQGATDIFIQPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F AVD LM+NFHLPKSTL MLVSAF G++ ++ Y+HAI + YRFYSYGD+SLLF
Sbjct: 293 YNFLAVDALMTNFHLPKSTLFMLVSAFAGLDTMRRAYEHAIENQYRFYSYGDSSLLFP 350
>gi|293365730|ref|ZP_06612439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
gi|307703671|ref|ZP_07640613.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
gi|291316098|gb|EFE56542.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
gi|307623078|gb|EFO02073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
Length = 342
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 202/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RDS++L++V+ D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDSSKLLIVNRETG---EFQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSDEAAATLRTVKENGGRVIAVGTTSIRTLETIGSKFNGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|188996184|ref|YP_001930435.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sulfurihydrogenibium sp. YO3AOP1]
gi|226713853|sp|B2V7F8|QUEA_SULSY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188931251|gb|ACD65881.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 336
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 133/356 (37%), Positives = 185/356 (51%), Gaps = 21/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P PRDS RLMV++ I + D+ +L D +V
Sbjct: 1 MKLSDFDYHLPKELIAKYPAQPRDSCRLMVLNRKDKT---IEHRIFRDVIDYLKPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + + I L + N W + + +KK +
Sbjct: 58 LNNTKVIPARLIGKK----EKTNANIEVFLLRPIEDNIWETLIKNVRRLKKNQKIIISDD 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ + + + I +++ + G +PLPPYI R + +D Y
Sbjct: 114 --------FYVEFLSKDDEKAIVKIHSKDIKSDLEKYGHVPLPPYIE--REDEEKDKDYY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A +GSVA+PTAGLHFT LL ++ G+ + ++TLHVG GTF PVK ED H M
Sbjct: 164 QTVFADKEGSVASPTAGLHFTKELLEKIKEKGVNIAYITLHVGLGTFKPVKTEDITKHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T + + K +V+VGTT +R LET G GFT+IFI P
Sbjct: 224 HEEYFTIPKETLEMIKKTKENKKSLVAVGTTVVRALETY----GKFGKTEGFTDIFIYPP 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLPKSTLLMLVSAF + + Y A+ YRF+SYGD L+
Sbjct: 280 YEFKIVDKLITNFHLPKSTLLMLVSAFADRDFILRAYNGAVKEKYRFFSYGDAMLI 335
>gi|94501955|ref|ZP_01308463.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Oceanobacter sp. RED65]
gi|94425897|gb|EAT10897.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Oceanobacter sp. RED65]
Length = 353
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 196/356 (55%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F+LP IA P R S+RL+ V+ I + D+ A + D +V
Sbjct: 1 MKTSDFHFELPQELIAQYPPKERTSSRLLCVNSESGRAD-IQHKVFKDILAEVQPGDLMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + ++ V+ + S+ K G +
Sbjct: 60 FNNTRVIPARLFGEKES-----GGKLEVLIERMTGTDTALVHMKSSRSPKPGSTITLEG- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ +V + + L +L + VG +PLPPY+ R + D Y
Sbjct: 114 -----LKVSVEGRQDALFELKFHLAPDQDLVHWLEQVGHMPLPPYME--REDEDSDRERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL+ L G+ + FVTLHVGAGTF PVKV+D ++H M
Sbjct: 167 QTVYNEKPGAVAAPTAGLHFDDALLNALKDKGVGIAFVTLHVGAGTFQPVKVDDVNEHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T +A+ K+ G ++++VGTTS+R LETA+ G I P+ G T IFI PG
Sbjct: 227 HSEYLEVSEETCEAIRKTKALGKKVIAVGTTSVRSLETASQS-GEIQPYQGDTEIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSAF G Y A+ YRF+SYGD LL
Sbjct: 286 YQFKTVDRLLTNFHLPESTLIMLVSAFVGRGPILNAYDEAVREQYRFFSYGDAMLL 341
>gi|149375025|ref|ZP_01892798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter algicola DG893]
gi|149360914|gb|EDM49365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter algicola DG893]
Length = 364
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + I +DLP+ L D +V
Sbjct: 1 MNVSDFHFDLPDELIARYPLKERSASRLLSLDGLSGD---IRHLRFTDLPSLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + + R SK +K+G +
Sbjct: 58 FNDTRVIPARLFGRKE-----TGGQVEVLVERVLGEHDILAHVRASKALKEGQKVLLEDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + S + + +G +PLPPY+ RP ++ D Y
Sbjct: 113 T-------PLRMSGRDDALFHLHCDSDEPVLDVLERIGHMPLPPYV--DRPDESSDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L+ L S+G++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 164 QTVYAREAGAVAAPTAGLHFDDRILAELESMGVETAFVTLHVGAGTFQPVRVEGIEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + T A+N+ ++RGGR+V+VGTTS+R LE+A+ G++ P+ G T+IFI PG
Sbjct: 224 HSEVAHVPQATVDAVNAARARGGRVVAVGTTSVRSLESASR-GGVVRPFQGETDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD +
Sbjct: 283 YRFQTVDAMVTNFHLPESTLIMLVSAFAGYQNVMSAYQAAVAECYRFFSYGDAMFI 338
>gi|55822510|ref|YP_140951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus CNRZ1066]
gi|81559694|sp|Q5M0W1|QUEA_STRT1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|55738495|gb|AAV62136.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus CNRZ1066]
Length = 347
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 155/359 (43%), Positives = 212/359 (59%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLKQRDASKLLVIDPVTR---EMTDTHFDHIIDQLNPRDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GYGRLTATVTEELDHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNIDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYTLSQEAADTLNSVKTAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY+F VD +NFHLPKSTL+MLVSAF G E + Y+HA+ YRF+S+GD + +
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAVQERYRFFSFGDAMFVTR 343
>gi|169829376|ref|YP_001699534.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus sphaericus C3-41]
gi|238688195|sp|B1HVA2|QUEA_LYSSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|168993864|gb|ACA41404.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus sphaericus C3-41]
Length = 346
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 200/361 (55%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF+LP IA P+ R ++RLMVV P + + + L + D +V
Sbjct: 1 MRVEDFDFELPEELIAQTPLVDRTASRLMVVTPGS---NEVEHQHFAHVLEELRTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-NSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L GV+ I L ++ + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVK----EETGAHIEVLLLKQLPGTDEWETLVKPAKRVKVGTVITF-- 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L AT + + G F GI + +G +PLPPYI K
Sbjct: 112 --GDGLLTATCTGELDHGGRTFEFHYDGI-FFEILEQLGEMPLPPYIREKLED----KDR 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK +GS AAPTAGLHFT LL ++ + G++V F+TLHVG GTF PV V+ ++H
Sbjct: 165 YQTVYAKERGSAAAPTAGLHFTEELLEQVKAKGVEVVFITLHVGLGTFRPVSVDSIENHE 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MH+E + A +N VK GG+I++VGTTS R LET ++ DG + G+T+IFI
Sbjct: 225 MHAEFYSVTEEAADTINRVKRNGGKIIAVGTTSTRTLETIGSKYDGEVRAEQGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F VD L++NFHLPKSTL+MLVS E YQ A+ YRF+S+GD +
Sbjct: 285 PGYTFTVVDGLITNFHLPKSTLVMLVSTLATRETILSAYQQAVEEKYRFFSFGDAMFIRP 344
Query: 359 K 359
K
Sbjct: 345 K 345
>gi|125623767|ref|YP_001032250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris MG1363]
gi|166216729|sp|A2RJR5|QUEA_LACLM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|124492575|emb|CAL97520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris MG1363]
gi|300070536|gb|ADJ59936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris NZ9000]
Length = 346
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 145/360 (40%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ R +RL+++ P + D D+ L + DA+V
Sbjct: 1 MNINDFDFDLPEELIAQTPLEKRSESRLLILDPKT---EELEDRHFYDIIDELEAGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 58 LNNTRVLPARLHGER----AETGGHIELLLLKDMGENRWETLAKPARKMKVGEEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V++ G ++ F GI + +G +PLPPYI + Y
Sbjct: 111 -GDGRLKAVVVEILEHGGRIVEFKYDGI-FLEILESLGEMPLPPYIHEQLEDQ----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK+ G +I + GTTS+R LET ++ DG I SG+T+IFI P
Sbjct: 225 HSEFYRLTEEAAAQLRAVKASGHKIFASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++ VD +NFHLPKSTL+MLV+AF G + + YQHAI YRF+S+GD + K
Sbjct: 285 GYEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLEAYQHAIDEKYRFFSFGDAMFVRSK 344
>gi|328957017|ref|YP_004374403.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. 17-4]
gi|328673341|gb|AEB29387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. 17-4]
Length = 345
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 152/355 (42%), Positives = 210/355 (59%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
K+FDFDLP IA P+ R S++L++++ + D +D+ LN DA+V N
Sbjct: 6 TKDFDFDLPEELIAQTPLENRSSSKLLILNKETG---EVDDKHFTDILEELNEGDALVMN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+L+GV+ + L + W +P+K G ++ F G
Sbjct: 63 DTRVLPARLHGVKP----ETGAHLEILLLKNTEKDQWETLVKPAKKATVGTVISF----G 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL ATV ++ N G ++ FS GI + +G +PLPPYI + YQT
Sbjct: 115 DGRLTATVTEELNHGGRIIDFSYDGI-FLEVLESLGEMPLPPYIKERLEDS----ERYQT 169
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL ++ S G+K+ F+TLHVG GTF PV V+ +DH MHS
Sbjct: 170 VYAKENGSAAAPTAGLHFTEELLEKIKSKGVKLIFLTLHVGLGTFRPVSVDSIEDHEMHS 229
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + +A L +V++ GGRIV+VGTTS+R LET T+ +G I SG+T+IFI+PGY
Sbjct: 230 EFYRLTEESATELTAVRNNGGRIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFISPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ VD +NFHLPKSTL+MLVSAF G E YQHA+ YRF+S+GD +
Sbjct: 290 TFKVVDAFSTNFHLPKSTLVMLVSAFAGREHVLAAYQHAVDEKYRFFSFGDAMFV 344
>gi|289550595|ref|YP_003471499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis HKU09-01]
gi|289180127|gb|ADC87372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis HKU09-01]
Length = 341
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 211/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V++ + D+ +LN D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLNKETGD---MKHQHFKDVINYLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGVK----EETGAKVEMLMLTQIENNDWEVLLKPAKRIKVGNQLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I + + G ++ GI L+ ++ +G +PLPPYI D Y
Sbjct: 111 -GEGKIIAECIKELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIK----ARLDDPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT NLL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTDNLLKDIKAKGVNIAFITLHVGLGTFRPVSVENINEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ LN+ K +G RI++VGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTENTAKLLNNTKLQGHRIIAVGTTSTRTLETIRRDHSQFIATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDALITNFHLPKSTLVMLVSAFSSRQFILTAYRKAVELEYRFFSFGDAMLII 341
>gi|150019970|ref|YP_001305324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermosipho
melanesiensis BI429]
gi|166218753|sp|A6LJ38|QUEA_THEM4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149792491|gb|ABR29939.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermosipho melanesiensis BI429]
Length = 334
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 203/357 (56%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA +PV PRD++RLMV++ I + ++ +L+ D +V
Sbjct: 1 MKLSDFDYYLPEELIAQKPVEPRDASRLMVLNRK---EKKIEHKIFRNIVEYLHEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A++ G + +I L ++S N W +P +KKG ++F +
Sbjct: 58 RNVTKVIPARIYGRKE-----TGAKIEVLLLEKISENVWEALVKPGSKVKKGTKIYFDDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+D + G +L F+I+ EL + +G PLPPY+ + + Y
Sbjct: 113 S-----YCVCLDWGDEGSRILEFNITEEELFK----LGEAPLPPYVK-----NKVSFERY 158
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GSVAAPTAGLHFT +LL +L G++ + LHVG GTF PVKVE+ +H M
Sbjct: 159 QTIYSRETGSVAAPTAGLHFTEDLLKKLEEKGVEFADLVLHVGLGTFRPVKVENITEHKM 218
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ T + + K GGRIV+VGTTS+R LET + + G T+IFI P
Sbjct: 219 HSESYYVPNETVKKIFETKKNGGRIVAVGTTSVRTLETIVRLE-RKESYHGKTDIFIYPP 277
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLPKSTLLMLVSAF G E + Y A+ YRF+S+G+ ++
Sbjct: 278 FEFKLVDALITNFHLPKSTLLMLVSAFAGREFIMEAYNIAVKMKYRFFSFGNACFIY 334
>gi|227822132|ref|YP_002826103.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium fredii NGR234]
gi|227341132|gb|ACP25350.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium fredii NGR234]
Length = 366
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 217/362 (59%), Positives = 263/362 (72%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P +SD V DLP+FL+ DA+V
Sbjct: 6 MRVDLFDFDLPETSIALRPASPRDSARMLVVRPQR--EPALSDFGVLDLPSFLSPGDALV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R ++S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 64 FNDTKVIPAQLEGIR-RRGEDVATQVSLTLHMRVAPDRWKAFARPARRLKPGDRISFGHG 122
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K GE+ L F +SG L+ I VG IPLPPYIA KR DARD
Sbjct: 123 GNACLLGSLDATVEEKGEAGEVTLRFELSGPVLDEAIMSVGHIPLPPYIASKRSEDARDR 182
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L +L GI+ +FVTLHVGAGTF+PVK +DTDD
Sbjct: 183 ADYQTVYAREEGAVAAPTAGLHFTDRLFGKLDEAGIERHFVTLHVGAGTFLPVKADDTDD 242
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH EIG +DA TA+ LN+V++RGGRIV VGTTSLRL+E+A TEDG I+PWSG T IFI
Sbjct: 243 HVMHEEIGHVDAVTAEKLNAVRARGGRIVCVGTTSLRLIESAATEDGKIHPWSGTTGIFI 302
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E + Y HAI+ YRFYSYGD SLLF
Sbjct: 303 TPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMRGAYTHAIAAGYRFYSYGDASLLF 362
Query: 358 QK 359
+K
Sbjct: 363 RK 364
>gi|269213885|ref|ZP_06158238.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
cinerea ATCC 14685]
gi|269145271|gb|EEZ71689.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
cinerea ATCC 14685]
Length = 356
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 153/358 (42%), Positives = 211/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVGEGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ G + + G + + G +PLPPYI R DA D Y
Sbjct: 119 --EGGIRAVMVER--AGALFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G++ VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLLRLKGKGVETAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARETGHLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + +Y+HA+ YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAVYRHAVEREYRFFSYGDAMILGR 350
>gi|110680196|ref|YP_683203.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
denitrificans OCh 114]
gi|123172304|sp|Q164S6|QUEA_ROSDO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|109456312|gb|ABG32517.1| S-adenosylmethionine [Roseobacter denitrificans OCh 114]
Length = 351
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 170/362 (46%), Positives = 224/362 (61%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V ISD +VSDLP +L+ D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPAVPRTSARLLVA-----KGRQISDSIVSDLPNWLSPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + I TL + +WS +P K +K + + F
Sbjct: 56 LNDTRVIPARLTGARHRDTAQGPMQARIEVTLLEPDAQGNWSALIKPLKKVKIAEEIIFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL AT+ G+ +L F++ G + + ++ G +PLPPYIA +RP D RD
Sbjct: 116 D-----RLRATLRAVK-DGQGVLQFNLEGDDFDAALNAAGAMPLPPYIATRRPADERDKS 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LLS L + G+ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQNSGAVAAPTASLHFDKALLSELAARGVLFSYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K G R++ VGTT+LRL+ETA E G I W G T+IFI
Sbjct: 230 KMHAEWGQVSAAAAAEINATKQAGKRVIPVGTTALRLIETAGRE-GQIKAWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RF D LM+NFHLPKSTL+MLVSA G +E + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFRFNVADALMTNFHLPKSTLMMLVSALMGYDEVRAIYDHAVAEKYRFFSYGDASLLIP 348
Query: 359 KR 360
+R
Sbjct: 349 QR 350
>gi|302383465|ref|YP_003819288.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Brevundimonas subvibrioides ATCC 15264]
gi|302194093|gb|ADL01665.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Brevundimonas subvibrioides ATCC 15264]
Length = 356
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 200/367 (54%), Positives = 247/367 (67%), Gaps = 19/367 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP RIALRP PRDSARL+VV ++DH++ DLPAFL DA+V
Sbjct: 1 MKTADFDFDLPEDRIALRPAEPRDSARLLVV-----QDGALADHVIRDLPAFLRPGDALV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKE--------ISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+T+VI A+L+GVR + TLH R +P++WS + +P K I+
Sbjct: 56 FNDTRVIPARLSGVRQRPNPVVGSPEGETLTVPVEATLHHRDTPDTWSAFMKPGKRIRPD 115
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
D + F L ATVI K + G + L F +SG L+ I VG +PLPPYIA KRP
Sbjct: 116 DRIVF------DSLSATVIAKSDDGLVTLRFDVSGPALDDAIRAVGVMPLPPYIAAKRPE 169
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD +DYQT +A GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK
Sbjct: 170 DDRDRLDYQTVFATHDGSVAAPTAGLHFTPALLDAIRAKGVTTHAVTLHVGAGTFLPVKA 229
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+DT DH MHSE G + TA ALN+V + GGRIV VGTTSLRLLE+ATT DG+I P+ G
Sbjct: 230 DDTADHRMHSEWGTVSGETAAALNAVHANGGRIVCVGTTSLRLLESATTPDGVIQPFHGD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGY FRA D+L++NFHLPKSTL MLVSAF G++ K Y HA++ YRFYSYGD
Sbjct: 290 TAIFITPGYAFRAADVLVTNFHLPKSTLFMLVSAFAGLDTMKTAYAHAVADGYRFYSYGD 349
Query: 353 TSLLFQK 359
SLLF++
Sbjct: 350 GSLLFRQ 356
>gi|167755988|ref|ZP_02428115.1| hypothetical protein CLORAM_01508 [Clostridium ramosum DSM 1402]
gi|237733303|ref|ZP_04563784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mollicutes
bacterium D7]
gi|167703980|gb|EDS18559.1| hypothetical protein CLORAM_01508 [Clostridium ramosum DSM 1402]
gi|229383684|gb|EEO33775.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprobacillus sp. D7]
Length = 350
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 197/357 (55%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P+ RD++RLMV++ N I D+ +L D +V
Sbjct: 10 MKISEFDFNLPEELIAQTPLDKRDTSRLMVLNRNQQT---IEHKHFYDIIDYLKPGDILV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G++ + L + W ++++K I+ F
Sbjct: 67 RNNTKVIPARLFGIK----EETNGHVEVLLLKDQGNDMWECLVGNARIVKIDTIITF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G + GI + +GT+PLPPYI K Y
Sbjct: 120 -GDGLLKAQCVEIKEEGIRVFKMIYEGI-FYEILDQLGTMPLPPYIKEKLDDQ----NRY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI+GS AAPTAGLHFT ++ ++ + GI++ VTLHVG GTF PVKV+D +H M
Sbjct: 174 QTVYAKIEGSAAAPTAGLHFTDEIIEKIKAKGIEILDVTLHVGLGTFRPVKVDDVLEHHM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A LN K G RI++VGTTS R LE + G T+IFI PG
Sbjct: 234 HSEYYMIEPDVADKLNQAKQNGQRIIAVGTTSTRTLEANMKKYGKFTSVHENTDIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y++ A+D L++NFHLPKSTLLML+SAF E K YQ AI YRF+S+GD+ +
Sbjct: 294 YKYEAIDCLITNFHLPKSTLLMLISAFASKEFIFKAYQEAIDEKYRFFSFGDSMFIM 350
>gi|257887874|ref|ZP_05667527.1| queuosine biosynthesis protein [Enterococcus faecium 1,141,733]
gi|257893327|ref|ZP_05672980.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,408]
gi|257896508|ref|ZP_05676161.1| queuosine biosynthesis protein [Enterococcus faecium Com12]
gi|257899488|ref|ZP_05679141.1| queuosine biosynthesis protein [Enterococcus faecium Com15]
gi|293379287|ref|ZP_06625433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium PC4.1]
gi|293573018|ref|ZP_06683960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E980]
gi|257823928|gb|EEV50860.1| queuosine biosynthesis protein [Enterococcus faecium 1,141,733]
gi|257829706|gb|EEV56313.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,408]
gi|257833073|gb|EEV59494.1| queuosine biosynthesis protein [Enterococcus faecium Com12]
gi|257837400|gb|EEV62474.1| queuosine biosynthesis protein [Enterococcus faecium Com15]
gi|291606920|gb|EFF36300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E980]
gi|292642083|gb|EFF60247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium PC4.1]
Length = 343
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 147/355 (41%), Positives = 204/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ RD +RL+V+ + D ++ L+ DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMKDKHFHEIIEELHPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEKP----DTGAHLEVLLLTNTEGDTWETLIKPAKRAKVGTRISF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLQAVVKEELEHGGRIIDFEYEGI-FLEILESLGEMPLPPYIKERLED----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H MHS
Sbjct: 168 VYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 288 EFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIDERYRFFSFGDAMFV 342
>gi|154248190|ref|YP_001419148.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Xanthobacter autotrophicus Py2]
gi|238686741|sp|A7IN97|QUEA_XANP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154162275|gb|ABS69491.1| Queuosine biosynthesis protein [Xanthobacter autotrophicus Py2]
Length = 362
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 183/362 (50%), Positives = 243/362 (67%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD+AR++VV P +SD V DLP F+ +NDA+V
Sbjct: 1 MRVDAFDFDLPEEHIALRPAEPRDAARMLVVRP--GGAPELSDLKVRDLPDFITANDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A L GVR I L R+ + W +A+P K ++ GD + F +
Sbjct: 59 VNDTRVIPAALEGVRERDGGSAV-RIEANLIKRLDASRWQAFAKPGKRLRVGDRVRFGGE 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A + K + G ++L F ++G L+ ++ VG +P+PPYIA +R D RD
Sbjct: 118 GSACLLGALDAQIAAKEDDGSVILAFDLAGTALDEAVTAVGHMPIPPYIAARRAEDDRDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A++ GSVAAPTA LHFT L++R+ + G ++ VTLHVGAGTF+PVK EDT
Sbjct: 178 ADYQTLFARVSGSVAAPTASLHFTPELMARIAATGASMHTVTLHVGAGTFLPVKAEDTTG 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A TA ALN+VK++GGRI +VG+TS RL+E+AT EDG I P+ G T+IFI
Sbjct: 238 HRMHAEWGEVSADTAAALNAVKAKGGRIFTVGSTSTRLIESATGEDGTIRPFVGETDIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD +++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL
Sbjct: 298 TPGYRFRAVDGMLTNFHLPRSTLVMLVAAFVGHEAQKRAYAHAIAAGYRFYSYGDACLLL 357
Query: 358 QK 359
+
Sbjct: 358 PE 359
>gi|289167559|ref|YP_003445828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Streptococcus mitis B6]
gi|288907126|emb|CBJ21960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Streptococcus mitis B6]
Length = 342
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAIVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFEGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVS+F G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSSFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|22536961|ref|NP_687812.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 2603V/R]
gi|76787449|ref|YP_329544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae A909]
gi|76798552|ref|ZP_00780784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 18RS21]
gi|77406569|ref|ZP_00783618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae H36B]
gi|77411332|ref|ZP_00787680.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae CJB111]
gi|46577057|sp|Q8E0D7|QUEA_STRA5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207329|sp|Q3K1Q9|QUEA_STRA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|22533815|gb|AAM99684.1|AE014228_5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 2603V/R]
gi|76562506|gb|ABA45090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae A909]
gi|76586086|gb|EAO62612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 18RS21]
gi|77162592|gb|EAO73555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae CJB111]
gi|77174822|gb|EAO77642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae H36B]
Length = 342
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L+V+ ++D + L DA+V
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKT---MTDSHFDHILDELKPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEK----QDTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLIATVTKELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFV 341
>gi|255066143|ref|ZP_05317998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sicca ATCC 29256]
gi|255049688|gb|EET45152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sicca ATCC 29256]
Length = 343
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 212/358 (59%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPDQLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYIEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGEKES-----GGKIEALIERVLDNHTALAHIRSSKSPKPGTKLIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ E+ + + + G +PLPPYI R D Y
Sbjct: 109 --EGDICAVMVER--ADELFCLRFEGEQTVYELLEQNGHLPLPPYIERAAGADDDT--RY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKHQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + +RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPPETVAAIEAAHARGNKVWAVGTTSMRALESAARETGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR +D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ H YRF+SYGD +L +
Sbjct: 283 YRFRVIDRLITNFHLPKSTLLMLVSAFSGMEHIRAVYRHAVEHEYRFFSYGDAMVLGR 340
>gi|118580221|ref|YP_901471.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Pelobacter
propionicus DSM 2379]
gi|166216735|sp|A1APZ3|QUEA_PELPD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|118502931|gb|ABK99413.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pelobacter
propionicus DSM 2379]
Length = 343
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 194/356 (54%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+VKEFD+ LP IA P RD +RLM+++ I L D+ L D +V
Sbjct: 1 MLVKEFDYHLPEELIARYPAPERDGSRLMLLNRESGT---IGHGLFRDIADHLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + EI WS R SK ++ G ++
Sbjct: 58 LNDTRVIPARLFGRKATGGRV---EIFLVRRQETQAERWSCLMRSSKGMRPGQLITL--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+++ LL F + G +PLPPY+ RP ++ D + Y
Sbjct: 112 --AGAMTALVVERLEPEGWLLEF-QGAEPFSVWLEREGEMPLPPYLQ--RPAESGDQLRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL RL G+ +TLH G GTF P++VE DH +
Sbjct: 167 QTVFARSAGAVAAPTAGLHFTPELLERLAERGVATACLTLHTGPGTFQPLRVERVQDHRI 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A T QA+ K RGGR+V+VGTTS R LE A E G + P SG +IFI PG
Sbjct: 227 HSERYHISAETCQAIAETKQRGGRVVAVGTTSARTLEYAADEKGGLCPGSGDADIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLP+STL+MLVSAF G E Y A YRFYSYGD +
Sbjct: 287 YRFRVVDALVTNFHLPESTLIMLVSAFAGKEYVFHAYHEAARLGYRFYSYGDAMFI 342
>gi|170723507|ref|YP_001751195.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida W619]
gi|229619924|sp|B1JDS3|QUEA_PSEPW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169761510|gb|ACA74826.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas putida W619]
Length = 349
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ ++ +DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPSGA---LAHKQFTDLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G ++
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKEGAVI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP D D Y
Sbjct: 112 GGEAEMVARH--------DTLFELRFTEEVLPLLERVGHMPLPPYI--DRPDDGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDQALLDKIAAKGVERAFVTLHVGAGTFQPVRVDKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVSQDVVDAIEACRARGGRVVAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSYGDAMFITR 338
>gi|25010872|ref|NP_735267.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae NEM316]
gi|77413595|ref|ZP_00789782.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 515]
gi|46577062|sp|Q8E611|QUEA_STRA3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|23095251|emb|CAD46461.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160361|gb|EAO71485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 515]
Length = 342
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L+V+ ++D + L DA+V
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKT---MTDSHFDHILDELKPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLIATVTKELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFV 341
>gi|163746642|ref|ZP_02153999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanibulbus indolifex HEL-45]
gi|161379756|gb|EDQ04168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanibulbus indolifex HEL-45]
Length = 348
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 162/360 (45%), Positives = 223/360 (61%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEELIATRPANPRSSARLLVAEG-----AQLHDRRVTDLTDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R + +I TL +WS +P + +K G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRASAQGAVQAKIEVTLLEPRGDGTWSALIKPLRKLKIGEEVIFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT ++ G+ L F+ +G + + ++ G +PLPPYIA KR DA+D
Sbjct: 116 DD-----LRAT-LEAVEDGQGHLRFNCAGDDFDAALNAAGAMPLPPYIAAKRAADAQDMT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+ VTLHVGAGTF+PVKV+D +H
Sbjct: 170 DYQTVFARHAGAVAAPTASLHFDETLLAALAAKGVTFSHVTLHVGAGTFLPVKVDDISEH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A+ + + ++ GGR++ VGTT+LRL+ETA DG I W G T+IFIT
Sbjct: 230 KMHAEWGRVSAEAAEEITATRAAGGRVIPVGTTALRLIETAAR-DGQITAWEGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTL+MLVSA G+++ K +Y HAI+ YRF+SYGD+SLL
Sbjct: 289 PGFTFNVTDGLMTNFHLPKSTLMMLVSALMGVQQVKDIYAHAIAEKYRFFSYGDSSLLLP 348
>gi|168486111|ref|ZP_02710619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1087-00]
gi|183570814|gb|EDT91342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1087-00]
Length = 342
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 202/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFYGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGCELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|13470903|ref|NP_102472.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mesorhizobium loti MAFF303099]
gi|21263904|sp|Q98M55|QUEA_RHILO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|14021646|dbj|BAB48258.1| S-adenosylmethionine tRNA ribosyltransferase [Mesorhizobium loti
MAFF303099]
Length = 361
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 200/361 (55%), Positives = 251/361 (69%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSA+++VV + D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFELPEERIALRPAEPRDSAKMLVV----KSGEALDDRKVGDLPSLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + ++ TLHMRV+P+ W + RP K I GD +HF
Sbjct: 57 FNDTKVIPAQLKGIRRRGEA--QAQVEATLHMRVAPDRWLAFMRPGKRIAAGDRIHFGHD 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 115 GNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L + L + G++ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 ADYQTIYAREEGAVAAPTAGLHFTPELFAALDAKGVERHFVTLHVGAGTFLPVKADDTAD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+ K+RGGRI++VGTTSLRLLE+A EDG + WSG T+IFI
Sbjct: 235 HKMHAEIGSVSRETADALNAAKARGGRIIAVGTTSLRLLESAAREDGTVPAWSGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR D+LM+NFHLP+STL MLVSAF G++ Y HAI++ YRFYSYGD SLL+
Sbjct: 295 TPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLDTMGAAYAHAIANRYRFYSYGDASLLY 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|322377318|ref|ZP_08051809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M334]
gi|321281518|gb|EFX58527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M334]
Length = 342
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---KMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VG+TS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAVTLRSVKENGGRVIAVGSTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|313669079|ref|YP_004049363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ST-640]
gi|313006541|emb|CBN88005.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria lactamica 020-06]
Length = 346
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLCFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ H YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEHEYRFFSYGDAMILGR 340
>gi|227550874|ref|ZP_03980923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX1330]
gi|227179972|gb|EEI60944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX1330]
Length = 347
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 147/355 (41%), Positives = 204/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ RD +RL+V+ + D ++ L+ DA+V N
Sbjct: 8 TEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMKDKHFHEIIEELHPGDALVMN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 65 NTRVLPARLYGEKP----DTGAHLEVLLLTNTEGDTWETLIKPAKRAKVGTRISF----G 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI + +G +PLPPYI + YQT
Sbjct: 117 DGRLQAVVKEELEHGGRIIDFEYEGI-FLEILESLGEMPLPPYIKERLED----PDRYQT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H MHS
Sbjct: 172 VYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 232 EFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITPGY 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 292 EFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIDERYRFFSFGDAMFV 346
>gi|99080934|ref|YP_613088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. TM1040]
gi|122398114|sp|Q1GHP0|QUEA_SILST RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|99037214|gb|ABF63826.1| Queuosine biosynthesis protein [Ruegeria sp. TM1040]
Length = 349
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 219/360 (60%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + ISD V+DL +L D +V
Sbjct: 1 MKLGDFDFDLPEELIATRPAVPRSSARLLVAEQDR-----ISDGRVTDLLDWLAPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R + + I TL + SW+ +P K IK G+ L F
Sbjct: 56 LNDTRVIPARLSGQRHRNSAQGPVSARIEVTLLEPQADGSWAGLLKPLKKIKIGETLRFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++D G+ L F+++G + + ++ G +PLPPYIA KRP D +D
Sbjct: 116 D-----ALSAELVD-VVDGQGRLRFNLAGDDFDAALAEAGAMPLPPYIAAKRPADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L G+ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDEPLLKALSEKGVTFTYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + K+ G R++ VGTT+LRL+E+A E G I PW G T+IFI
Sbjct: 230 KMHAEWGQVTPEAAAEIAATKAAGNRVIPVGTTALRLIESAARESGAITPWEGETDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G + + +Y HA+ YRF+SYGD SLL
Sbjct: 290 PGFEFRVADALMTNFHLPKSTLMMLVSALMGQDRIRAIYAHAVKERYRFFSYGDASLLIP 349
>gi|332074997|gb|EGI85469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA41301]
Length = 342
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVS+F G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSSFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|27379800|ref|NP_771329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium japonicum USDA 110]
gi|46577026|sp|Q89L59|QUEA_BRAJA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|27352953|dbj|BAC49954.1| S-adenosylmethionine tRNA ribosyltransferase [Bradyrhizobium
japonicum USDA 110]
Length = 366
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 188/361 (52%), Positives = 239/361 (66%), Gaps = 10/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP RIALRP PRDSA+++VV + D +S+LP +L D +V
Sbjct: 1 MRTDLFDFDLPAERIALRPASPRDSAKMLVVEGG-----ALRDRTISELPQWLKRGDQLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL G R E +I TL R+ + W +P+K + GD + F ++
Sbjct: 56 VNDTKVIAAQLKGRRI--GRETEPKIEATLIKRLDGSRWQALVKPAKKLIAGDRIRFGNE 113
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V K + GE+ L FS G L++ I+ +G+ PLPPYIA KR D +D+
Sbjct: 114 GKVCLLGHLDAEVEAKGSEGEVTLSFSFHGPALDQAIADLGSPPLPPYIASKRTPDDQDF 173
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT L L G+ + VTLHVGAGTF+PVKVEDT
Sbjct: 174 ADYQTMFAANEGAVAAPTAGLHFTPALEQALRERGVGLNRVTLHVGAGTFLPVKVEDTAG 233
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G I A TA+ LN + GGRI++VGTTSLRLLE+A +EDG I P++ T+IFI
Sbjct: 234 HKMHAEWGTISAETAERLNIARHNGGRIIAVGTTSLRLLESAASEDGTIQPFAAETSIFI 293
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVDIL++NFHLPKSTL MLVSAF G+E ++ Y HAI+ YRFYSYGD LLF
Sbjct: 294 TPGYRFRAVDILLTNFHLPKSTLFMLVSAFSGLETMRRAYAHAIAQGYRFYSYGDACLLF 353
Query: 358 Q 358
+
Sbjct: 354 R 354
>gi|307947103|ref|ZP_07662438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseibium
sp. TrichSKD4]
gi|307770767|gb|EFO29993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseibium
sp. TrichSKD4]
Length = 357
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 198/360 (55%), Positives = 251/360 (69%), Gaps = 6/360 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP RIALRP PRDSAR++VV P +SD V DLP L DA+V
Sbjct: 1 MRVEDFDFVLPNERIALRPARPRDSARMLVVQP--GDTAELSDFGVRDLPLLLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G R E IS TLH+R + + W + RP K ++ GD+L F +
Sbjct: 59 FNDTKVIPAQLEGKRVRG--DIEARISATLHLRAAADRWKAFVRPGKKVQLGDVLVF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G L A +K G++LLVF S EL+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 EGGVTLTARAEEKSPAGDVLLVFDRSAAELDEAIASVGHIPLPPYIAQKRGEDEQDRSDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT +LL+ L + GI+ + VTLHVGAGTF+PVKV+DTDDH M
Sbjct: 175 QTMFAEKDGAVAAPTAGLHFTPDLLAALDARGIEQHRVTLHVGAGTFLPVKVDDTDDHQM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK+RG ++VSVGTTSLR+LE+A G + ++G T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALQAVKARGNKVVSVGTTSLRILESAAQGSGGLQAFAGETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y FRA+D LM+NFHLP+STL MLVSA G++ K+ Y HAI H YRFYSYGD SLLF ++
Sbjct: 295 YEFRAIDALMTNFHLPRSTLFMLVSALSGLDVMKRAYTHAIDHEYRFYSYGDASLLFPQK 354
>gi|254466678|ref|ZP_05080089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium Y4I]
gi|206687586|gb|EDZ48068.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium Y4I]
Length = 354
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 161/362 (44%), Positives = 224/362 (61%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V + D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPDTLIATRPANPRSSARLLVA-----AGGSLHDGRVTDLVDWLQPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R +I TL + SW+ +P K I++G+ + F
Sbjct: 56 LNDTKVIPARLSGLRRRDSAQGPVAAKIEATLLEPRADGSWAALLKPLKKIREGEEIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ ++ G+ L F++SG + + ++ G +PLPPYIA KR D +D
Sbjct: 116 DDLSAA------LEAIEDGQGHLRFNLSGTDFDAALAEAGAMPLPPYIAAKRAADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL L + G+++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDAPLLEALKARGVEISYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + K+ GGR++ VGTT+LRL+E+A DG I+ W G T+IFI
Sbjct: 230 RMHAEWGKVSEEAASEIAATKAAGGRVIPVGTTALRLIESAAR-DGQIHAWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ D LM+NFHLPKSTLLMLVSA G EE +++Y HA+ YRF+SYGD SLL
Sbjct: 289 PGFKFQVADALMTNFHLPKSTLLMLVSALMGQEEIRRIYDHAVRSGYRFFSYGDASLLIP 348
Query: 359 KR 360
+
Sbjct: 349 AK 350
>gi|182679292|ref|YP_001833438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Beijerinckia indica subsp. indica ATCC 9039]
gi|238691230|sp|B2IHG4|QUEA_BEII9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|182635175|gb|ACB95949.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 367
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 185/361 (51%), Positives = 252/361 (69%), Gaps = 8/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD++RL+VV P+ ++DH + +LP FL + D +V
Sbjct: 1 MRVDLFDFDLPPERIALRPVEPRDASRLLVVRPDSGD---MTDHGMRELPDFLRAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R +R +I TLH R W + +P+K ++ G+ + F Q
Sbjct: 58 VNDTRVIPARLHGFRSRGESR--AKIEATLHKREGEALWRAFVKPAKKLRVGETICFARQ 115
Query: 121 DGQSR---LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ + LEA V++K GE++L F+ +G L+ + L+G +PLPPYIA KR D++D
Sbjct: 116 EPGTEVESLEAEVLEKGAEGEVVLGFNRAGAALDAALDLLGEMPLPPYIAGKRAPDSQDS 175
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+DYQT +A G+VAAPTA LHFT L++ + + G+ + VTLHVGAGTF+PVK EDTD
Sbjct: 176 LDYQTLFANRSGAVAAPTASLHFTPRLIAAIEARGVTICKVTLHVGAGTFLPVKAEDTDA 235
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A A LN V + GGRI++ GTTSLRLLE+A EDG+I P+ G T+IF+
Sbjct: 236 HRMHAEWGEVSAEVAAFLNKVHAAGGRIIAAGTTSLRLLESAVDEDGLIQPFQGETSIFM 295
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+RFRAVDIL++NFHLP+STL MLV AF G+E ++ Y HAI+ +YRFYSYGD LLF
Sbjct: 296 TPGFRFRAVDILLTNFHLPRSTLFMLVCAFAGLETMRRAYAHAIAASYRFYSYGDACLLF 355
Query: 358 Q 358
+
Sbjct: 356 R 356
>gi|319936566|ref|ZP_08010980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprobacillus sp. 29_1]
gi|319808364|gb|EFW04924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprobacillus sp. 29_1]
Length = 341
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFD+ LP IA P+ RD++RLMV+ I D D+ +L D +V
Sbjct: 1 MKLSEFDYHLPEELIAQTPLKKRDTSRLMVLDRKN---ETIEDKHFYDILDYLYEGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + + L + + W ++++K I+ F
Sbjct: 58 RNNTKVIPARLYGTK----EETNGHVEVLLLKDLGNDVWECLVGNARIVKIDTIITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A I + G GI + +GT+PLPPYI K Y
Sbjct: 111 -GDGSLKAKCIHIGDEGIRHFEMIYEGI-FYEILDTLGTMPLPPYIKEKLEDQ----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI+GS AAPTAGLHFT +++ ++ + G+K+ VTLHVG GTF PVKV+D +H M
Sbjct: 165 QTVYAKIEGSAAAPTAGLHFTDDIIDKVKAKGVKILDVTLHVGLGTFRPVKVDDVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID AQ LN+ K+ G RI+SVGTTS R LE + G T+IFI PG
Sbjct: 225 HSEFYMIDEDVAQQLNNAKANGQRIISVGTTSTRTLEANFKKYGQFKATQESTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F A+D L++NFHLPKSTL+MLVSAF E K Y HA+ YRF+S+GD +
Sbjct: 285 YQFEAIDALITNFHLPKSTLVMLVSAFANKEFILKAYHHAVEEKYRFFSFGDCMFI 340
>gi|146340922|ref|YP_001205970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. ORS278]
gi|166216703|sp|A4YV19|QUEA_BRASO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146193728|emb|CAL77745.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. ORS278]
Length = 364
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 189/362 (52%), Positives = 237/362 (65%), Gaps = 9/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IALRP PR++AR++VV + V+ D + DLP +L D +V
Sbjct: 1 MRTDLFDFHLPPENIALRPASPREAARMLVVQGD----GVLRDRTIGDLPDWLEPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R E +I TL R+ + W RP+K + GD + F ++
Sbjct: 57 VNDTKVIAAQLSGRRIS--RETEAKIEATLIKRLDGSRWQALVRPAKKLLAGDTIRFGNE 114
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K GE+ L F G L++ I+ +G PLPPYIA KRP D +D
Sbjct: 115 GKVCLLGHLDATVEAKGEEGEVTLSFVFHGPALDQAIADLGRPPLPPYIAGKRPADEQDA 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT L RL + G+ + VTLHVGAGTF+PVKVEDT+
Sbjct: 175 QDYQTMFAAKEGAVAAPTAGLHFTPALEQRLRARGVGLQRVTLHVGAGTFLPVKVEDTEG 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + TA ALN K+ GGRIV+VGTTS+RLLE+A DG I P+ T+IFI
Sbjct: 235 HRMHAEWGSLTPETAAALNQAKAEGGRIVAVGTTSMRLLESAALPDGTIAPFEAETSIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVDILM+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LLF
Sbjct: 295 TPGYRFRAVDILMTNFHLPRSTLFMLVSAFAGLETMQAAYAHAIESGYRFYSYGDACLLF 354
Query: 358 QK 359
++
Sbjct: 355 RQ 356
>gi|167031890|ref|YP_001667121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida GB-1]
gi|189038874|sp|B0KPG6|QUEA_PSEPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166858378|gb|ABY96785.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas putida GB-1]
Length = 349
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ +S DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPTGA---LSHRQFPDLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G ++
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKVGAVI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARH--------DTLFELRFTEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEKIAAKGVERAFVTLHVGAGTFQPVRVDKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVGQDVVDAIEACRARGGRVVAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFITR 338
>gi|120554041|ref|YP_958392.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Marinobacter aquaeolei VT8]
gi|166216731|sp|A1TZN6|QUEA_MARAV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|120323890|gb|ABM18205.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Marinobacter aquaeolei VT8]
Length = 366
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 200/360 (55%), Gaps = 20/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + +DLP L D +V
Sbjct: 1 MNVSDFHFDLPDELIARYPLKERSASRLLSLDGLSGQT---THLKFTDLPDLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLFGQKE-----TGGKVEILVERLLGEKELLAHTRSSKSPKEGQRLLLEDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + L F G E + +G +PLPPY+ R + D
Sbjct: 113 AA--------LRMLARKDALFHFVYEGDEAFLDVLERIGHMPLPPYME--REDEQSDRER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK G+VAAPTAGLHF +LS L + GI+ +VTLHVGAGTF PV+V+ +DH+
Sbjct: 163 YQTVYAKEAGAVAAPTAGLHFDDVVLSALKAKGIEFAYVTLHVGAGTFQPVRVDKIEDHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSEI + T +A+N ++RGGR+V+VGTTS+R LE+A+ G + + G T+IFI P
Sbjct: 223 MHSEIAHVPEETVKAVNEARARGGRVVAVGTTSVRSLESASR-AGRLQEFRGDTDIFIYP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYRF+ VD +++NFHLP+STL+MLVSAF G Y+ A+ YRF+SYGD L +
Sbjct: 282 GYRFQTVDAMITNFHLPESTLIMLVSAFAGYNNIMSAYREAVEQKYRFFSYGDAMFLTAQ 341
>gi|225873355|ref|YP_002754814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidobacterium capsulatum ATCC 51196]
gi|254764259|sp|C1F7K8|QUEA_ACIC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|225793693|gb|ACO33783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidobacterium capsulatum ATCC 51196]
Length = 353
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 144/362 (39%), Positives = 205/362 (56%), Gaps = 16/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V EFDF LP IA P+ R ++R++ + + D + +DLP FL D +V
Sbjct: 1 MLVSEFDFHLPEDLIAQEPLADRAASRMLALDRSTGAW---QDRMFADLPGFLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
NNT+VI A+L G R + ++ L ++S W RP + + G+ +H
Sbjct: 58 LNNTRVIPARLFGRRAGLRTQPGHEATGQVEVMLTEQISEWEWRALVRPGRKVPVGESIH 117
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F G L+A +I GE L F+ + + VG IPLPPYI R+ +
Sbjct: 118 F----GNEGLQAEIIAHGEFGERTLRFTPI-PDFFHVLERVGHIPLPPYIHREDRPED-- 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y + GSVAAPTAGLHFT +L++L +G++ ++TLHVG GTF PV+V+ +
Sbjct: 171 RERYQTVYNQQPGSVAAPTAGLHFTPQMLAKLQELGVQTAYITLHVGLGTFQPVRVDKVE 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTN 294
D +H E + TA A+N+ R+++VGTT++R LE T + + P +G T
Sbjct: 231 DIRLHRERYTLSPETAAAVNAALHENRRVIAVGTTTVRTLEHCATVADGKPLVPHAGETE 290
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI+PGY+FR V L++NFHLP+STLLMLVSAF G E Y+HA+ YRF+SYGD
Sbjct: 291 IFISPGYKFRIVQGLLTNFHLPQSTLLMLVSAFAGREAVLAAYRHAVEQRYRFFSYGDCM 350
Query: 355 LL 356
L
Sbjct: 351 FL 352
>gi|329889500|ref|ZP_08267843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas diminuta ATCC 11568]
gi|328844801|gb|EGF94365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas diminuta ATCC 11568]
Length = 364
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 195/366 (53%), Positives = 246/366 (67%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP + IALRP PRDSARL+VV + ++ DLP FL DA+V
Sbjct: 1 MRTSDFDFDLPEACIALRPADPRDSARLLVV-----KGGDLQHRIIRDLPDFLQPGDALV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L+GVR E + TLH R +P+ WS + +P K +K GD + F
Sbjct: 56 FNDTRVIPARLSGVRHRTAPEGELLSVPVEATLHHRDAPDVWSAFMKPGKRLKVGDRVRF 115
Query: 118 FSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
++ +++A + K G + L F ++G L+ I VG +PLPPYIA KR D
Sbjct: 116 GREEDNACLLGQVDAEITAKGEDGLVTLRFDLAGPVLDDAIREVGVMPLPPYIAAKRAED 175
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+D DYQT +A+ GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK +
Sbjct: 176 DQDLKDYQTVFAEHDGSVAAPTAGLHFTPALLDAIRARGVTTHAVTLHVGAGTFLPVKAD 235
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT DH MHSE G + A TA ALN+V++ GGRIV VGTTSLRLLE+AT EDG+I P+ G T
Sbjct: 236 DTADHKMHSEWGEVSAETAAALNAVRAAGGRIVCVGTTSLRLLESATGEDGVIQPFHGDT 295
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRA D+LM+NFHLPKSTL MLVSAF G+E + Y HAI YRFYSYGD
Sbjct: 296 AIFITPGYRFRACDVLMTNFHLPKSTLFMLVSAFAGLETMRAAYAHAIDSGYRFYSYGDG 355
Query: 354 SLLFQK 359
SLLF++
Sbjct: 356 SLLFRE 361
>gi|148255729|ref|YP_001240314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. BTAi1]
gi|166216702|sp|A5EJR4|QUEA_BRASB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146407902|gb|ABQ36408.1| S-adenosylmethionine [Bradyrhizobium sp. BTAi1]
Length = 364
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 190/362 (52%), Positives = 240/362 (66%), Gaps = 9/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IALRP PR++AR++VV + V+ D +V+DLP +L D +V
Sbjct: 1 MRTDLFDFHLPPENIALRPASPREAARMLVVQGD----GVLRDRIVADLPDWLEPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R E +I TL R+ + W RP+K + GD + F +
Sbjct: 57 VNDTKVIAAQLSGRRVS--RETEAKIEATLIKRLDGSRWQALVRPAKKLAPGDTIRFGHE 114
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K GE+ L F G L++ I+ +G PLPPYIA KRP D +D
Sbjct: 115 GKVCLLGHLDATVEAKGEEGEVTLSFVFHGPALDQAIADLGRPPLPPYIAGKRPADEQDA 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT L RL + G+ + VTLHVGAGTF+PVKVEDT+
Sbjct: 175 ADYQTMFAAKEGAVAAPTAGLHFTPALEQRLRARGVGLQRVTLHVGAGTFLPVKVEDTEG 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A TA ALN +++GGRIV+VGTTS+RLLE+A DG I P+ T+IFI
Sbjct: 235 HRMHAEWGSLSAETAAALNEARAKGGRIVAVGTTSMRLLESAALPDGTIAPFEAETSIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVDILM+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LLF
Sbjct: 295 TPGYRFRAVDILMTNFHLPRSTLFMLVSAFAGLETMQAAYAHAIRSGYRFYSYGDACLLF 354
Query: 358 QK 359
++
Sbjct: 355 RQ 356
>gi|28378877|ref|NP_785769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum WCFS1]
gi|254557082|ref|YP_003063499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum JDM1]
gi|300768017|ref|ZP_07077923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308181076|ref|YP_003925204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum subsp. plantarum ST-III]
gi|38258031|sp|Q88V04|QUEA_LACPL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|28271714|emb|CAD64620.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum WCFS1]
gi|254046009|gb|ACT62802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum JDM1]
gi|300494366|gb|EFK29528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308046567|gb|ADN99110.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum subsp. plantarum ST-III]
Length = 344
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 149/355 (41%), Positives = 206/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++FD+DLP IA P+ RDS+RL+ + + D D+ LN DA+V N
Sbjct: 5 LEDFDYDLPHELIAQTPIKKRDSSRLLELDRQTG---EMQDKHFYDIIDQLNPGDAVVMN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L GV+ L + W +P+K K G ++ F G
Sbjct: 62 NSRVMPARLYGVKP----ETGGHAEVLLLHNTEGDEWETLMKPAKRAKVGTVISF----G 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L ATV + G ++ F GI + +G PLPPYI K YQT
Sbjct: 114 DGKLTATVTAEKEDGIRMIEFHYDGI-FMEILESLGETPLPPYIKEKLDD----PDRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLH+T LL ++ GIK+ ++TLHVG GTF PV+ ++ DDH MHS
Sbjct: 169 VYAKENGSAAAPTAGLHWTKELLQKVQDKGIKLVYLTLHVGLGTFRPVEEDNIDDHKMHS 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E +D A+ LN V+ GGRI++ GTTS+R LET ++ DG I P SG+T+IFI PGY
Sbjct: 229 EFYRLDEDAAKTLNEVRQNGGRIIATGTTSIRTLETIGSKFDGEIKPDSGWTDIFIKPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++ VD ++NFHLPKSTL+MLV+AF G + K YQHAI YRF+S+GD +
Sbjct: 289 QWKVVDAFITNFHLPKSTLVMLVAAFTGRDMILKAYQHAIDEKYRFFSFGDAMFI 343
>gi|170017579|ref|YP_001728498.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
citreum KM20]
gi|169804436|gb|ACA83054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
citreum KM20]
Length = 355
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 207/360 (57%), Gaps = 13/360 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RD++RL+V+ + D D+ ++N DAIV
Sbjct: 8 QLADFDYDLPEALIAQTPLKQRDTSRLLVLDADTGA---YQDKHFYDILDYVNPGDAIVM 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+GVR L + + W RP+K G + F
Sbjct: 65 NNSRVLPARLHGVRP----ETGGHAEVLLLRQDHGDVWETLVRPAKKSPVGSTIVFGDDV 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
Q + ATV+ + G + F GI + +G +PLPPYI K YQ
Sbjct: 121 TQPIMTATVVGELEHGGRYVEFHYDGI-FMALLDKLGEMPLPPYIKEKLADQ----ERYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+T LL+++ + G+K +TLHVG GTF PV+ E+ +DH MH
Sbjct: 176 TVYSKVDGSAAAPTAGLHWTPELLNQVRAKGVKTVELTLHVGLGTFRPVEEENIEDHKMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LET ++ +G + SG+T+IFI PG
Sbjct: 236 SEFYQLSQDAADTLNQVRENGGRIIATGTTSIRTLETIGSKFEGKLQADSGWTDIFIKPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y++ VD ++NFHLPKSTL+MLV+AF G + YQHA++ YRF+S+GD + + +
Sbjct: 296 YKWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYQHAVAEQYRFFSFGDAMFIKRDK 355
>gi|83647164|ref|YP_435599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hahella
chejuensis KCTC 2396]
gi|123531953|sp|Q2SDV0|QUEA_HAHCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|83635207|gb|ABC31174.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hahella
chejuensis KCTC 2396]
Length = 351
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 149/360 (41%), Positives = 204/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LPP IA RP+ R S+RL+ + I+ DL +N D +V
Sbjct: 1 MRVDDFDFELPPELIARRPLAERSSSRLLCLDAETG---EINHRGFKDLLGMVNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + VS + R SK K G +
Sbjct: 58 FNDTRVIPARLFGQKRS-----GGKVEVMVERVVSMTEMLAHVRASKAPKPGVEILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ T++++ G++ + G + + G +PLPPYI R D D Y
Sbjct: 110 --EENYVLTMVER--EGDLFRLRVSQGGSVSELLERCGHMPLPPYI--DREDDLSDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL + G++ FVTLHVGAGTF PV+V+ DH M
Sbjct: 164 QTVYSRQPGAVAAPTAGLHFDEALLLAMSQKGVETAFVTLHVGAGTFQPVRVDVVQDHQM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + + VK+ GGR+V+VGTT++R LETA+ G I P++G T+IFI PG
Sbjct: 224 HSEYLEVSADVCERVRQVKAAGGRVVAVGTTAVRALETASRS-GSIEPYAGDTSIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y F VD L++NFHLPKSTLLMLVSAF G E YQ AI YRF+SYGD L +++
Sbjct: 283 YEFVTVDALVTNFHLPKSTLLMLVSAFAGREHILAAYQEAIEQRYRFFSYGDAMFLHRRQ 342
>gi|301065826|ref|YP_003787849.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus casei str. Zhang]
gi|300438233|gb|ADK17999.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus casei str. Zhang]
Length = 357
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 202/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V
Sbjct: 17 QLSDFDYDLPHELIAQTPLKERDASRLLVLNSETG---EMQDKHFYDILDYFKPGDALVM 73
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 74 NDTRVMPARLYGVKP----ETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 125
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+ATV + G ++ F GI + +G PLPPYI K YQ
Sbjct: 126 GDGLLKATVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEKLED----PEMYQ 180
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 181 TVYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 240
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 241 SEFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 301 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 357
>gi|319744823|gb|EFV97162.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae ATCC 13813]
Length = 342
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L+V+ ++D + L DA+V
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKT---MADSHFDHILDELKPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLIATVTKELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN+VK GGRI++VGTTS+R LET ++ +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSKEAADTLNAVKESGGRIIAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFV 341
>gi|299535652|ref|ZP_07048973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus fusiformis ZC1]
gi|298728852|gb|EFI69406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus fusiformis ZC1]
Length = 346
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 142/362 (39%), Positives = 203/362 (56%), Gaps = 18/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF+LP IA P+ R ++RLMVV P + H + + L++ D +V
Sbjct: 1 MRVEDFDFELPEELIAQTPLVDRTASRLMVVTPGS---NKVEHHHFAHVLDELHAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV-SPNSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L GV+ I L ++ + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVK----EETGAHIEVLLLKQMAGTDEWETLVKPAKRVKVGTVITF-- 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L AT + G F GI + +G +PLPPYI K
Sbjct: 112 --GDGLLTATCTGELEHGGRTFEFQYDGI-FYEILEQLGEMPLPPYIREKLED----KDR 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK +GS AAPTAGLHFT LL+++ + G++V F+TLHVG GTF PV V+ ++H
Sbjct: 165 YQTVYAKERGSAAAPTAGLHFTEELLAQVKAKGVEVVFITLHVGLGTFRPVSVDSIENHE 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MH+E + A +N VK GG++++VGTTS R LET ++ +G + G+T+IFI
Sbjct: 225 MHAEFYSVSEQAAHTINRVKRNGGKVIAVGTTSTRTLETIGSKYEGEVRAEQGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F VD L++NFHLPKSTL+MLVS E YQ A+ YRF+S+GD +
Sbjct: 285 PGYNFTVVDGLITNFHLPKSTLVMLVSTLATRETILSAYQQAVEERYRFFSFGDAMFIRP 344
Query: 359 KR 360
K+
Sbjct: 345 KK 346
>gi|145299556|ref|YP_001142397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|166216696|sp|A4SP27|QUEA_AERS4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|142852328|gb|ABO90649.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 355
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 133/364 (36%), Positives = 202/364 (55%), Gaps = 16/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + D+ LN D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPMAERTASRLLQLDGQSGA---LRHGQFVDVLDQLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEVLVERILDEHSVLAHVRASKAPKPGTRLILDGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+++A + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 PDGEKVDAEMRARHDALFEIHFLDPRP--VLEILEAIGHMPLPPYI--DRPDEDADKERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL+++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 169 QTVYNQKPGAVAAPTAGLHFDEPLLAKIRAKGVETAFVTLHVGAGTFQPVRVDKIEDHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED----GIINPWSGFTNIF 296
HSE + A+ + ++RGGR+++VGTTS+R LE+A + P+ T+IF
Sbjct: 229 HSEYAEVPQEVVDAIAATRARGGRVIAVGTTSVRSLESAAKASLALSKPLAPFFSDTDIF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD +
Sbjct: 289 IFPGYQFQVVDAMVTNFHLPESTLIMLVSAFAGYDHVMAAYQAAVAEQYRFFSYGDAMFV 348
Query: 357 FQKR 360
++R
Sbjct: 349 TRRR 352
>gi|306829783|ref|ZP_07462972.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis ATCC 6249]
gi|304428134|gb|EFM31225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis ATCC 6249]
Length = 342
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 202/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EFQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V + G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTQELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKFVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|77408883|ref|ZP_00785609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae COH1]
gi|77172522|gb|EAO75665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae COH1]
Length = 342
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L+V+ ++D + L DA+V
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKT---MTDSHFDHILDELKPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G+ + F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGNRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLIATVTKELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGHDFVLEAYNHAVEERYRFFSFGDAMFV 341
>gi|227534466|ref|ZP_03964515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187865|gb|EEI67932.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 361
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 138/357 (38%), Positives = 201/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V
Sbjct: 21 QLSDFDYDLPHELIAQTPLKERDASRLLVLNSETG---EMQDKHFYDILDYFKPGDALVM 77
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 78 NDTRVMPARLYGVKP----ETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 129
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V + G ++ F GI + +G PLPPYI K YQ
Sbjct: 130 GDGLLKARVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEKLED----PEMYQ 184
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 185 TVYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 244
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 245 SEFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 304
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 305 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 361
>gi|217076403|ref|YP_002334119.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermosipho
africanus TCF52B]
gi|226736744|sp|B7IFB4|QUEA_THEAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|217036256|gb|ACJ74778.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermosipho
africanus TCF52B]
Length = 335
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 138/357 (38%), Positives = 192/357 (53%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P PRDS+RLMV++ I + D+ +L D +V
Sbjct: 1 MKLSDFDYYLPEELIAQTPAEPRDSSRLMVLNRKEKT---IEHRIFRDIVEYLKPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ + L ++S W +P +KKG +
Sbjct: 58 RNITKVIPARLYGVKE-----TGARVEILLLEKISEGVWEALVKPGSKVKKGTKIILSEG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+E D G +L F+ S +L +G PLPPYI ++ + Y
Sbjct: 113 -----VEVICKDYSQQGARILEFNCSDDKLFE----LGNAPLPPYIKNQKVP----FERY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL RL + G++ + LHVG GTF PVKVED +H M
Sbjct: 160 QTVYSKETGSVAAPTAGLHFTEELLERLRNKGLEFADLILHVGLGTFRPVKVEDIREHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A T + + + GRI++VGTTS+R LET + G T+IFI P
Sbjct: 220 HSERYYVPAETVKKIRETRKNKGRIIAVGTTSVRTLETIARLPNQ-ESYHGKTDIFIYPP 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ D +++NFHLPKSTLLMLV+AF G + + Y A+ YRF+S GD ++
Sbjct: 279 FEFKLTDAIITNFHLPKSTLLMLVAAFAGKDFILEAYNTAVKMKYRFFSLGDACFIY 335
>gi|116494314|ref|YP_806048.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus casei ATCC 334]
gi|239629700|ref|ZP_04672731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|116104464|gb|ABJ69606.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Lactobacillus casei ATCC 334]
gi|239528386|gb|EEQ67387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 356
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 202/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V
Sbjct: 16 QLSDFDYDLPHELIAQTPLKERDASRLLVLNSETG---EMQDKHFYDILDYFKPGDALVM 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 73 NDTRVMPARLYGVKP----ETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 124
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+ATV + G ++ F GI + +G PLPPYI K YQ
Sbjct: 125 GDGLLKATVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEKLED----PEMYQ 179
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 180 TVYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 239
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 240 SEFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 299
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 300 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 356
>gi|26987568|ref|NP_742993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida KT2440]
gi|37999650|sp|Q88PL8|QUEA_PSEPK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|24982243|gb|AAN66457.1|AE016275_2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida KT2440]
Length = 349
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 142/358 (39%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ ++ DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPTGA---LAHRQFPDLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G ++
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKVGAVI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARH--------DTLFELRFTEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEKIADKGVERAFVTLHVGAGTFQPVRVDKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVGQDVVDAIEACRARGGRVIAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFITR 338
>gi|148546106|ref|YP_001266208.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida F1]
gi|166216741|sp|A5VYR4|QUEA_PSEP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148510164|gb|ABQ77024.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas putida F1]
gi|313497201|gb|ADR58567.1| QueA [Pseudomonas putida BIRD-1]
Length = 349
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 142/358 (39%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ ++ DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPTGA---LAHRQFPDLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G ++
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKVGAVI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARH--------DTLFELRFTEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEKIADKGVERAFVTLHVGAGTFQPVRVDKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVGQDVVDAIEACRARGGRVIAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFITR 338
>gi|169350857|ref|ZP_02867795.1| hypothetical protein CLOSPI_01631 [Clostridium spiroforme DSM 1552]
gi|169292443|gb|EDS74576.1| hypothetical protein CLOSPI_01631 [Clostridium spiroforme DSM 1552]
Length = 349
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 201/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P+ RD++RLMV++ I D+ +L D +V
Sbjct: 9 MKLSEFDFELPEELIAQTPLDKRDTSRLMVLNRENQT---IEHKHFYDIINYLKPGDVLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ + L + W ++++K I+ F
Sbjct: 66 RNNTKVIPARLFGVK----EETNGHVEVLLLKDQGNDVWECLVGNARIVKLDTIITF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ + G + GI + +GT+PLPPYI K + Y
Sbjct: 119 -GDGLLKAKCLEIKDEGIRVFKMIYDGI-FYEILDQLGTMPLPPYIKEKLNDQS----RY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI+GS AAPTAGLHFT +++ ++ + GI++ +TLHVG GTF PVKV++ +H M
Sbjct: 173 QTVYAKIEGSAAAPTAGLHFTDDIIRKIKAKGIEILDITLHVGLGTFRPVKVDNVLEHHM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A LN K+ G RI++VGTTS R LE + G T+IFI PG
Sbjct: 233 HSEYYMIEPEVADKLNQAKANGQRIIAVGTTSTRTLEANMQKYGKFTATHENTDIFIYPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++A+D L++NFHLPKSTLLML+SAF E K Y AI + YRF+S+GD+ +
Sbjct: 293 YQYQAIDCLITNFHLPKSTLLMLISAFATKEFIFKAYHEAIENKYRFFSFGDSMFIM 349
>gi|71152934|sp|Q8CS92|QUEA_STAES RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|329724657|gb|EGG61163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU144]
gi|329733752|gb|EGG70078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU045]
gi|329737099|gb|EGG73353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU028]
Length = 341
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLSKDTG---ELTHLHFRDVIHYFEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|327381705|gb|AEA53181.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus casei LC2W]
gi|327384871|gb|AEA56345.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus casei BD-II]
Length = 357
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 138/357 (38%), Positives = 201/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V
Sbjct: 17 QLSDFDYDLPHELIAQTPLKERDASRLLVLNSETG---EMQDKRFYDILDYFKPGDALVM 73
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 74 NDTRVMPARLYGVKP----ETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 125
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V + G ++ F GI + +G PLPPYI K YQ
Sbjct: 126 GDGLLKARVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEKLED----PEMYQ 180
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 181 TVYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 240
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 241 SEFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 301 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 357
>gi|168483957|ref|ZP_02708909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1873-00]
gi|172042767|gb|EDT50813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1873-00]
Length = 342
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 202/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEGLIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQRI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|254469478|ref|ZP_05082883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudovibrio sp. JE062]
gi|211961313|gb|EEA96508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudovibrio sp. JE062]
Length = 375
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 200/362 (55%), Positives = 250/362 (69%), Gaps = 7/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FDFDLPP IALRP PRDS+RL+VV P+ +++D V LP L DA+V
Sbjct: 15 MLVDDFDFDLPPENIALRPAVPRDSSRLLVVRPD--GEQLLTDDQVLSLPDLLEPGDALV 72
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF-- 118
FN+TKVI AQL G R ++ TLH R S W + RP+K +K GD + F
Sbjct: 73 FNDTKVIPAQLLGFRTRDG--VTAKVGVTLHQRASAKEWRAFVRPAKKLKVGDTVRFAFD 130
Query: 119 -SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ L A V +K G+IL F S +L+ I+ VG IPLPPYIA KR D +D
Sbjct: 131 EEGKDAAELSAVVTEKSEAGDILFEFDRSAGDLDAAIAQVGHIPLPPYIAAKRAEDDQDR 190
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YAK +G+VAAPTAGLHFT L + L GI+ +FVTLHVGAGTF+PVK + T+D
Sbjct: 191 KDYQTIYAKHEGAVAAPTAGLHFTDRLFAALEERGIEKHFVTLHVGAGTFLPVKADKTED 250
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E G I TA ALN+V++RG +IVSVGTTSLR+LE++ TEDG+INP S T+IFI
Sbjct: 251 HKMHFEYGEISEETAAALNAVRARGNKIVSVGTTSLRILESSVTEDGVINPISQSTDIFI 310
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+F+A+D LM+NFHLP+STL MLVSA G+EE + Y+HAIS YRFYSYGD+SLLF
Sbjct: 311 TPGYQFKAIDALMTNFHLPRSTLFMLVSALSGMEEMRGAYEHAISSGYRFYSYGDSSLLF 370
Query: 358 QK 359
+K
Sbjct: 371 KK 372
>gi|254460455|ref|ZP_05073871.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2083]
gi|206677044|gb|EDZ41531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium HTCC2083]
Length = 352
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 164/363 (45%), Positives = 223/363 (61%), Gaps = 14/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA RP PR SARL++ I D VSDL D +V
Sbjct: 1 MKLSDFDFYLPEDLIATRPAKPRSSARLLLA-----KDGAIKDAYVSDLVKIFQPGDLLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVS-PNSWSVYARPSKVIKKGDILHF 117
NNTKVI A+L G R E +I TL ++ P +W +P + +K+G+++ F
Sbjct: 56 LNNTKVIPARLFGVRKRESVHGSGEAKIEVTLLEPIATPGTWQALIKPLRKVKEGEVMVF 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L AT+ DK + G+ L F++ G + + ++ G +PLPPYIA +RP DA+D
Sbjct: 116 SE-----TLSATLTDK-DDGQGTLQFNLLGDDFDTALAEAGAMPLPPYIAARRPADAQDK 169
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A+ G+VAAPTA LHF + LL L ++ VTLHVGAGTF+PVKVED
Sbjct: 170 DDYQTVFAQHSGAVAAPTASLHFDAALLGELKERCVEFAEVTLHVGAGTFLPVKVEDVTT 229
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G +D A + + K G R++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 HKMHAEWGQVDETAADQITAAKREGRRVIPVGTTALRLIESAAAQTGEIAPWEGETDIFI 289
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F D LM+NFHLPKSTL+MLVSA G E ++Y HAI++ YRF+SYGD+SLL
Sbjct: 290 YPGFKFNVADALMTNFHLPKSTLMMLVSALMGKERVDQIYTHAIANEYRFFSYGDSSLLV 349
Query: 358 QKR 360
++
Sbjct: 350 PEK 352
>gi|191637650|ref|YP_001986816.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus casei BL23]
gi|190711952|emb|CAQ65958.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus casei BL23]
Length = 356
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 138/357 (38%), Positives = 201/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V
Sbjct: 16 QLSDFDYDLPHELIAQTPLKERDASRLLVLNSETG---EMQDKRFYDILDYFKPGDALVM 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 73 NDTRVMPARLYGVKP----ETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 124
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V + G ++ F GI + +G PLPPYI K YQ
Sbjct: 125 GDGLLKARVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEKLED----PEMYQ 179
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 180 TVYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 239
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 240 SEFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 299
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 300 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 356
>gi|116512383|ref|YP_809599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris SK11]
gi|116108037|gb|ABJ73177.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Lactococcus lactis subsp. cremoris SK11]
Length = 348
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 143/359 (39%), Positives = 205/359 (57%), Gaps = 17/359 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLP IA P+ R +RL+++ P + D ++ L + DA+V
Sbjct: 4 NINDFDFDLPEELIAQTPLEKRSESRLLILDPKT---EELEDRHFYNIIDELEAGDALVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 61 NNTRVLPARLHGER----AETGGHIELLLLKDMGENRWETLAKPARKMKVGEEVVF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G RL+A V++ G ++ F GI + +G +PLPPYI + YQ
Sbjct: 113 GDGRLKAVVVEILEHGGRIVEFKYDGI-FLEILESLGEMPLPPYIHEQLEDQ----ERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H MH
Sbjct: 168 TVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHHMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A L +VK+ G +I + GTTS+R LET ++ DG I SG+T+IFI PG
Sbjct: 228 SEFYRLTEEAAAQLRAVKASGHKIFASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y ++ VD +NFHLPKSTL+MLV+AF G + + YQHAI YRF+S+GD + K
Sbjct: 288 YEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLEAYQHAIDEKYRFFSFGDAMFVRPK 346
>gi|261365393|ref|ZP_05978276.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa ATCC 25996]
gi|288566193|gb|EFC87753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa ATCC 25996]
Length = 347
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 211/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D +LP ++ + D +V
Sbjct: 1 MDISDFDFTLPDQLIAQHPPEVRGSSRLLVALPD----MPLQDRAFGNLPDYIEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKES-----GGKIEALIERVLDNHTALAHIRSSKSPKPGTKLIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ E+ + + + G +PLPPYI R D Y
Sbjct: 109 --EGDICAVMVER--ADELFCLRFEGEQTVYELLEQNGHLPLPPYIERAAGADDD--KRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKHQGAVAAPTAGLHFTDELLGRLKTKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + +RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPPETVAAIEAAHARGNKVWAVGTTSMRALESAARETGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR +D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ H YRF+SYGD +L +
Sbjct: 283 YRFRVIDRLITNFHLPKSTLLMLVSAFSGMEHIRTVYRHAVEHEYRFFSYGDAMVLGR 340
>gi|170077817|ref|YP_001734455.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7002]
gi|169885486|gb|ACA99199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7002]
Length = 358
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 146/361 (40%), Positives = 197/361 (54%), Gaps = 17/361 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+DLPP RIA PV PRD +RL+V+ I L +L ND +V N
Sbjct: 7 LSSYDYDLPPERIAQTPVTPRDRSRLLVLD----SVDSIQHQHFYHLVDWLQPNDLLVMN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS-QD 121
NTKVI A+L+G + + L S ++W +P K G + F + D
Sbjct: 63 NTKVIPARLHGRK-----TTGAPVEVLLLEERSADTWLALVKPGKRFTLGSEILFTAPHD 117
Query: 122 GQSRLEATVIDKWNT-GEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
L+ATV+D+ G LL F + L + G IP PPY+
Sbjct: 118 LSQTLKATVVDRDPETGGRLLEFQLRPNQTLWSVLDDFGEIPFPPYVT----DSEAKPDQ 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHFT + L G++ FVTLHVG GTF PV+VED H
Sbjct: 174 YQTIYAETPGAVAAPTAGLHFTPEVFEALEQKGVEKTFVTLHVGVGTFRPVEVEDITAHD 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFIT 298
MH E + T + + K++GGR+++VGTT +R LE A G + + G TN+FI
Sbjct: 234 MHYEWIDVPEETVKKIRETKAKGGRVIAVGTTVVRSLEGMAAASPGELQSFQGQTNLFIY 293
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLPKS+LLMLVSA G E +YQ AI+ YRFYS+GD L+
Sbjct: 294 PGYEWQVVDGLITNFHLPKSSLLMLVSALIGRERLLDVYQAAIAQEYRFYSFGDAMLILP 353
Query: 359 K 359
+
Sbjct: 354 E 354
>gi|319783733|ref|YP_004143209.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169621|gb|ADV13159.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 362
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 199/361 (55%), Positives = 250/361 (69%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSA++++V P + D V DLP+ L++ D +V
Sbjct: 1 MRVDLFDFELPEERIALRPAQPRDSAKMLLVKPG----EELEDRTVGDLPSLLSAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R ++ TLHMR++P+ W + RP K I GD +HF
Sbjct: 57 FNDTKVIPAQLKGIRRRGEAT--AQVEATLHMRMAPDRWLAFMRPGKRIAAGDRIHFGHD 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 115 GNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA +G+VAAPTAGLHFT L + L + G++ FVTLHVGAGTF+PVK +DT D
Sbjct: 175 ADYQTIYASEEGAVAAPTAGLHFTPELFAALDAKGVERRFVTLHVGAGTFLPVKADDTAD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + TA ALN+ ++RGGRIV+VGTTSLRLLE+A EDG + WSG T+IFI
Sbjct: 235 HKMHAETGSVSEATADALNAARARGGRIVAVGTTSLRLLESAAREDGTLAAWSGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR D+LM+NFHLP+STL MLVSAF G++ + Y HAI++ YRFYSYGD SLLF
Sbjct: 295 TPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIANRYRFYSYGDASLLF 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|325109089|ref|YP_004270157.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Planctomyces brasiliensis DSM 5305]
gi|324969357|gb|ADY60135.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Planctomyces brasiliensis DSM 5305]
Length = 354
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 137/356 (38%), Positives = 198/356 (55%), Gaps = 9/356 (2%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV PRD +RL+V I +LP +L +ND +++N
Sbjct: 7 IEAYDYHLPEELIAQHPVEPRDHSRLLVYRR---ADQSIVHRRFHNLPEYLRANDCLIWN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
T+V+ A+L G R + ++ W + + +K G+ L
Sbjct: 64 QTRVVPARLYGRR----AETGGKWEGLFLKLLADGDWEIIGQTRGKLKAGEFLEIPHPGS 119
Query: 123 QSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L+ +I++ G + +G + G+IPLPPYI +A D YQ
Sbjct: 120 EDVLQLKLIERREGGCWIARPETNGEVSPWDLLDQFGSIPLPPYIQDGHASEA-DRERYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHFT L+ R + G+ VTLHVG GTF PV V++ D H MH
Sbjct: 179 TVYAQTPGAVAAPTAGLHFTPELIERCQAAGVDCSSVTLHVGLGTFRPVSVDNLDAHQMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + + T L GGR ++VGTT++R LETA+ E G + PW G +++FI PGY
Sbjct: 239 REWCEVTSETVGQLQRCYEAGGRRIAVGTTTVRTLETASRESGQLQPWDGESDLFIRPGY 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+FR+ D L++NFHLPKSTLL+++SA G EE ++Y+ AIS YRFYSYGD L+
Sbjct: 299 QFRSTDGLITNFHLPKSTLLIMLSAMVGREEILRIYEEAISEQYRFYSYGDAMLIL 354
>gi|330504700|ref|YP_004381569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
mendocina NK-01]
gi|328918986|gb|AEB59817.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
mendocina NK-01]
Length = 347
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R ++RL+ + + +D+ L D +V
Sbjct: 1 MRVADFHFDLPESLIARHPLAERRASRLLQLDGPSGA---LRHGQFTDVLEQLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDQHRVLAHVRSSKSPKPGSQI-LIEG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L + + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARH--------NALFELRFAEPVLALLERVGHMPLPPYI--DRPDEEADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAEKAGAVAAPTAGLHFDDELLAAIRAKGVETAFVTLHVGAGTFQPVRVERIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+V+VGTTS+R LETA DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVVAVGTTSVRSLETAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y+ A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYSETMAAYREAVAQGYRFFSYGDAMFITR 338
>gi|325131502|gb|EGC54209.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M6190]
gi|325137548|gb|EGC60130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis ES14902]
Length = 346
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPMQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMILGR 340
>gi|241664129|ref|YP_002982489.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
pickettii 12D]
gi|240866156|gb|ACS63817.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ralstonia
pickettii 12D]
Length = 356
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 208/356 (58%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V + D +DL +L D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPDRTASRLLAVRR-AGDAVHFEDRQFADLVDYLRPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+ G + ++ + + ++ R SK +G L
Sbjct: 63 DTRVIKARFFGQKAS-----GGKVEVLVERLLDEHTVLAQIRSSKSPVEGTTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L F ++L I G +PLPPYI D+ D YQT
Sbjct: 118 ------VTVGPRAEPFFTLRFPQPALDL---IEQYGRLPLPPYIEHD--PDSFDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L ++L ++GI+ F+TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYARNPGAVAAPTAGLHFDDALFAKLDAMGIQRGFLTLHVGAGTFQPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A A+A+ + ++ GGRI++VGTTS+R LE+A DG +N SG T+IFITPGYR
Sbjct: 227 EWYEITAELAEAIRATRAAGGRIIAVGTTSMRALESAAQPDGTLNACSGETDIFITPGYR 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FRAVD+L++NFHLPKSTLLMLVSAF G+ ++ YQHAI+ YRF+SYGD LL +
Sbjct: 287 FRAVDLLVTNFHLPKSTLLMLVSAFAGMSAIREAYQHAIAQRYRFFSYGDAMLLTR 342
>gi|116515685|ref|YP_816714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae D39]
gi|148997530|ref|ZP_01825135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP11-BS70]
gi|168575875|ref|ZP_02721790.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae MLV-016]
gi|46577049|sp|Q8DPA0|QUEA_STRR6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|122278400|sp|Q04JT4|QUEA_STRP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116076261|gb|ABJ53981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae D39]
gi|147756585|gb|EDK63626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP11-BS70]
gi|183578232|gb|EDT98760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae MLV-016]
Length = 342
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 202/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQRI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|282875935|ref|ZP_06284802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis SK135]
gi|281294960|gb|EFA87487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis SK135]
Length = 341
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLSKDTG---ELTHLHFRDVIYYFEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|241895532|ref|ZP_04782828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weissella
paramesenteroides ATCC 33313]
gi|241871110|gb|EER74861.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weissella
paramesenteroides ATCC 33313]
Length = 348
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 141/355 (39%), Positives = 207/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD++LP IA P+ RD +RL+ ++ + + D D+ +LN DA+V N
Sbjct: 8 LNDFDYELPHELIAQTPLERRDGSRLLELNADTG---ELHDRHFYDIIDYLNPGDALVMN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L GVR + L + + W +P++ G + F G
Sbjct: 65 NSRVLPARLYGVRP----ETGGHVEVLLLRQEKDDVWETLVKPARKYPVGQKIVF----G 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L A VI++ G ++ F GI + +G +PLPPYI K YQT
Sbjct: 117 DGQLTAEVIEELEHGGRMIKFHYDGI-FLEILEELGEMPLPPYIKEKLADQ----ERYQT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K+ GS AAPTAGLH+T LL ++ GIK+ +TLHVG GTF PV+ ++ DDH MHS
Sbjct: 172 VYSKVNGSAAAPTAGLHWTPELLQKVADKGIKLVELTLHVGLGTFRPVEEDNIDDHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + AQ LN V++ GGRIV+ GTTS+R LET + DG ++ SG+T+IFI PG+
Sbjct: 232 EFYQLSEEAAQTLNEVRANGGRIVATGTTSIRTLETIGAKFDGELHADSGWTDIFIKPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+R VD ++NFHLPKSTL+MLV+AF G + Y+HA++ YRF+S+GD +
Sbjct: 292 EWRVVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYKHAVAEKYRFFSFGDAMFI 346
>gi|327481774|gb|AEA85084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
stutzeri DSM 4166]
Length = 349
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P+ R ++RL+V+ +S +DL ++ D +V
Sbjct: 1 MQVADFYFELPDALIARHPLAERRASRLLVLDGQSG---QMSHRNFADLLDYVRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKA-----TGGKLEILVERVTGNRSVLAHVRSSKSPKPGSQI-LLDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + + A L + ++ + +G +PLPPYI RP DA D Y
Sbjct: 112 GGAAEMVARHDA--------LFELVFDEDVLPLLERIGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL L + G++ +VTLHVGAGTF PV+VE ++H M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLDALRNAGVQTAYVTLHVGAGTFQPVRVERIEEHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+++VGTTS+R LETA DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVTQEVVDAVAACRARGGRVIAVGTTSVRSLETAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 KTFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAEAVAQRYRFFSYGDAMFITR 338
>gi|288904875|ref|YP_003430097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus UCN34]
gi|306830927|ref|ZP_07464089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325977816|ref|YP_004287532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|288731601|emb|CBI13156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus UCN34]
gi|304426950|gb|EFM30060.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325177744|emb|CBZ47788.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 342
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+V+ + D + LN DA+V
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDHKT---HEMVDAHFDHILDELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTQGDQWEVLAKPAKRLRVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F+ GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVEFAYDGI-FLEVLESLGEMPLPPYIHEKLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQDLLAKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ G R+V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAQTLRDVKAAGRRVVAVGTTSIRTLETIGSKFNGDIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD +
Sbjct: 285 GYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYQHAIDERYRFFSFGDAMFV 341
>gi|170743609|ref|YP_001772264.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium sp. 4-46]
gi|238688051|sp|B0U9V5|QUEA_METS4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|168197883|gb|ACA19830.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium sp. 4-46]
Length = 362
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 193/363 (53%), Positives = 246/363 (67%), Gaps = 10/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRPV PRD+ARL+ V P +++ V DLPA L D +V
Sbjct: 1 MRVDLFDFDLPEALIALRPVEPRDAARLLRVAPG----HPLAEARVRDLPALLRPGDCLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G+R + LH R P+ W +ARP K +++GD + F S
Sbjct: 57 FNDTRVIPARLRGLRARPDGSSV-RVEAMLHRREGPDCWRAFARPGKRLREGDRIRFGSG 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
L+ATV + GEI L F ++G L+ ++ +G +PLPPYIA +RP DAR
Sbjct: 116 RDGSACDLGHLDATVAARGEEGEITLAFDLAGAFLDEAVARLGELPLPPYIAGRRPADAR 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHFT +LL+RL + GI +TLHVGAGTF+PVK +DT
Sbjct: 176 DAADYQTVYAREPGAVAAPTAGLHFTPDLLARLGAAGIGEARLTLHVGAGTFLPVKAQDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+ H MH+E G I TA LN ++ GGRIV+VGTTSLRLLE+A DG I P++G T+I
Sbjct: 236 EAHRMHAETGEITPGTAARLNRARAEGGRIVAVGTTSLRLLESAAEPDGTIRPFAGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAF G+E + Y HA++ YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFAGLETMRAAYAHAVAQGYRFYSYGDASL 355
Query: 356 LFQ 358
LF+
Sbjct: 356 LFR 358
>gi|209885349|ref|YP_002289206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oligotropha
carboxidovorans OM5]
gi|226713845|sp|B6JFC2|QUEA_OLICO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209873545|gb|ACI93341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oligotropha
carboxidovorans OM5]
Length = 361
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 190/361 (52%), Positives = 247/361 (68%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLPP IALRP PRDSARL++V PN+ + DH V DLP L D IV
Sbjct: 1 MRTDLFDFDLPPECIALRPAEPRDSARLLLVRPNVG----VEDHSVRDLPGLLAPGDQIV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R + E I TL R+ + W RP++ + +GD+L F ++
Sbjct: 57 VNDTKVIAAQLSGRRIGGTS--EPHIDVTLIKRIDGSRWQALVRPARKLSEGDVLRFGNE 114
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A+V K GE+ L F+ G L++ I+ +G PLPPYIA +R D +D
Sbjct: 115 GRVCLLGNLDASVEAKGEAGEVTLAFAFHGPVLDQAIADLGAPPLPPYIASRRAPDDKDV 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +AK +G+VAAPTAGLHFT L + L + GI + +TLHVGAGTF+PVK +DTDD
Sbjct: 175 GDYQTMFAKNEGAVAAPTAGLHFTPALEAALAARGIGIQRLTLHVGAGTFLPVKADDTDD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE G + TA+ LN +++GGR+V+VG+TS+RLLE+A TEDGII P++G T IFI
Sbjct: 235 HKMHSEWGTVSEETAKTLNEARAKGGRVVAVGSTSMRLLESAATEDGIIQPFTGETAIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+FRAVD++M+NFHLP+STL MLVSAF G++ + Y HAI+ YRFYSYGD LLF
Sbjct: 295 TPGYKFRAVDVMMTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIAKGYRFYSYGDACLLF 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|296111819|ref|YP_003622201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
kimchii IMSNU 11154]
gi|295833351|gb|ADG41232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
kimchii IMSNU 11154]
Length = 353
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 138/358 (38%), Positives = 202/358 (56%), Gaps = 13/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD++LP IA P+ RDS+RL+V+ + D D+ +++N DAIV
Sbjct: 8 QLTDFDYNLPEELIAQTPLKQRDSSRLLVLDADSGD---YEDKHFYDILSYVNPGDAIVM 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+G R L + + W +P+K G + F
Sbjct: 65 NNSRVLPARLHGARP----ETGGHAEVLLLRQDHGDVWETLVKPAKKSPIGSTIVFGDDM 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ATV+ + G + F GI + +G +PLPPYI K YQ
Sbjct: 121 NHPIMTATVVGELEHGGRYIEFHYDGI-FMELLDKLGEMPLPPYIKEKLADQ----ERYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+T LL ++ + G++ +TLHVG GTF PV+ E+ +DH MH
Sbjct: 176 TVYSKVDGSAAAPTAGLHWTPELLDKVRAKGVQTVELTLHVGLGTFRPVEEENIEDHKMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A ALN V + GGRI++ GTTS+R LET ++ +G + SG+T+IFI PG
Sbjct: 236 SEFYQLSQEAADALNQVHANGGRIIATGTTSIRTLETIGSKFNGHLQADSGWTDIFIKPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y + VD ++NFHLPKSTL+MLV+AF G + YQHA+ YRF+S+GD + +
Sbjct: 296 YHWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYQHAVDDKYRFFSFGDAMFIKR 353
>gi|89094745|ref|ZP_01167680.1| putative S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Oceanospirillum sp. MED92]
gi|89080999|gb|EAR60236.1| putative S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Oceanospirillum sp. MED92]
Length = 350
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 205/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R ++RL+ V V+ +D+ + D ++
Sbjct: 1 MQVKDFHFDLPEELIASFPLEERSASRLLSVDGESG---VLKHGCFTDVLDLIQPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + R S+ K+G L
Sbjct: 58 FNDTRVIPARLFGQKES-----GGKVEVLVERMLDEKRALAHVRSSRSPKEGSKLLL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EA ++ + + L F I G L + G +PLPPY+ R + D Y
Sbjct: 110 --EGGIEAEMVGR-HENLFELRFHIEG-NLVDALETHGHMPLPPYMK--REDQSSDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF LL++L G++ FVTLHVGAGTF PVKV++ D+H+M
Sbjct: 164 QTVYNKKPGAVAAPTAGLHFDDALLAKLDEKGVQRAFVTLHVGAGTFQPVKVDNIDEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + + ++ G R+++VGTTS+R LE+A+ + G I P+ G ++IFI PG
Sbjct: 224 HSEYIEVSEEVCELIKQTRANGKRVIAVGTTSVRSLESASQK-GEIAPFFGDSDIFIFPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F++VD +++NFHLP+STLLMLVSAF G E Y+ A+ YRF+SYGD L +K
Sbjct: 283 YEFKSVDAMITNFHLPESTLLMLVSAFSGYENMMTAYREAVEQKYRFFSYGDAMYLTRK 341
>gi|114707080|ref|ZP_01439979.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Fulvimarina
pelagi HTCC2506]
gi|114537630|gb|EAU40755.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Fulvimarina
pelagi HTCC2506]
Length = 358
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 204/361 (56%), Positives = 254/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LPP RIALRP PR+SA L+ V +SD ++DLPA + D +V
Sbjct: 1 MRVDLFDFELPPERIALRPAEPRESAMLLGV-----SLTGLSDLRIADLPALIEPGDVLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE---KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL G R +R ++ TLHMR+SP SW+ + RP K IK GD L F
Sbjct: 56 FNDTKVIPAQLFGTRVREDSRDGEGVAQVEATLHMRLSPGSWAAFVRPGKRIKVGDTLVF 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
S D ++ L A V + GE L F SG +L+ I+ VG +PLPPYIA +R DARD+
Sbjct: 116 ASDDAET-LAAEVTARGEGGEATLTFEHSGPDLDAAIAAVGHVPLPPYIAARRGDDARDW 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ G+VAAPTAGLHFT NLL +L G+ F+TLHVGAGTF+PVK +DT+D
Sbjct: 175 TDYQTIYAREAGAVAAPTAGLHFTDNLLEKLHERGVATEFLTLHVGAGTFLPVKADDTED 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG IDA A LN+ +S GGRI+SVGTTSLRLLE+A +DG I P++G T+IFI
Sbjct: 235 HRMHAEIGTIDAAMADRLNAARSAGGRIISVGTTSLRLLESAAGDDGRIAPFTGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRF+AVD LM+NFHLP+STL MLVSAFCG+E ++ Y+HAI + YRFYSYGD LL
Sbjct: 295 TPGYRFKAVDRLMTNFHLPRSTLFMLVSAFCGLERMRRAYEHAIENGYRFYSYGDACLLD 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|57867143|ref|YP_188779.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis RP62A]
gi|71153095|sp|Q5HNR1|QUEA_STAEQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57637801|gb|AAW54589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis RP62A]
Length = 341
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLSKDTG---ELTHLHFRDVIHYFEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGDMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|319400966|gb|EFV89185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis FRI909]
Length = 341
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLRKDTG---EMTHLHFRDVIHYFEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHHLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GDGKIVAECIEELKQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNKIEQKGVHIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQKTADLLNQTKENGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSKKYILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|104780219|ref|YP_606717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
entomophila L48]
gi|166216739|sp|Q1IEK2|QUEA_PSEE4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|95109206|emb|CAK13903.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Pseudomonas entomophila L48]
Length = 349
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ ++ +DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPSG---ELAHKQFTDLLEYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKEGAQI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARH--------DTLFELRFSEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDEALLEKIAAKGVERAFVTLHVGAGTFQPVRVDKIEDHTM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIFPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SYGD + +
Sbjct: 281 RPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSYGDAMFITR 338
>gi|309388952|gb|ADO76832.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Halanaerobium praevalens DSM 2228]
Length = 347
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 150/362 (41%), Positives = 213/362 (58%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EF++ LP IA +P+ RD +RLMV++P +I +++ +L +L+ D I+
Sbjct: 1 MKVEEFNYQLPEELIAQKPLSKRDESRLMVLNPEQQ---IIEENIFKNLKEYLDPGDMII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + EI L +S W V RP + KKG + F
Sbjct: 58 MNNSRVIPARLYGAKI----PTGTEIELLLLNELSEGRWEVLVRPGRRAKKGVKIKF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q LEA V++ + G ++ FS E ++ +G +PLPPYI K
Sbjct: 111 --QDILEAEVVEYTDFGGRIVEFSWDHKKYNFEEVLNQLGEMPLPPYINEKLDD----PE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K +GS AAPTAGLHFT +LL L GI + ++TLHVG GTF PVK E+ ++H
Sbjct: 165 RYQTVYSKKRGSAAAPTAGLHFTDSLLKELEEYGIILDYITLHVGLGTFRPVKSENIEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E I A TA + VK++G ++V+VGTT R LE+A +G ++ + G+T+IFI
Sbjct: 225 EMHEEYAEISAETAAKIKKVKTQGNKVVAVGTTVTRTLESAAA-NGELSEYQGWTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ +D L++NFHLPKSTLLMLVSA G E YQ A+ YRF+S GD L+
Sbjct: 284 PGYEFKVIDSLITNFHLPKSTLLMLVSALAGKELVLSAYQKAVEKEYRFFSLGDAMLILN 343
Query: 359 KR 360
++
Sbjct: 344 RK 345
>gi|325272158|ref|ZP_08138589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
sp. TJI-51]
gi|324102721|gb|EGC00137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
sp. TJI-51]
Length = 349
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 142/358 (39%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ V++ DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPSG---VLAHRQFPDLLEYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G ++
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKEGAVI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARH--------DTLFELRFTEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDEALLEKIAAKGVERAFVTLHVGAGTFQPVRVDKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVSQDVVDAITACRARGGRVIAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSYGDAMFITR 338
>gi|325846681|ref|ZP_08169596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481439|gb|EGC84480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 340
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 198/356 (55%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD++LP IA P RD +RLMVV D D+ +LN D +V
Sbjct: 1 MRTEDFDYNLPEELIAQHPADKRDFSRLMVVDRKTGQR---EDKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R +E++I L + + W V +P K +K G F +
Sbjct: 58 MNDTRVIPARLFGHRP----DKEEKIEVFLLENIEKDKWEVLVKPGKKMKIGTKCIFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VID G ++ FS GI + + +G +PLPPYI K Y
Sbjct: 114 -----LSLEVIDIKEDGNRVVEFSYEGI-FQEILDRLGNMPLPPYIKEKLKD----KERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ F+TL+VG GTF PVKV+D +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEDKGVKLAFITLNVGLGTFRPVKVDDVKNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K RI+S GTT+ R LE+ ++G I SG+T+IFI PG
Sbjct: 224 HSEYYQISKETADLINETKKNNKRIISTGTTTTRTLESVFKKNGQIKEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F +D ++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 284 FKFNVIDCQITNFHLPKSTLIMLVSALANKEIILDAYKDAVEKKYRFFSFGDAMFL 339
>gi|126726330|ref|ZP_01742171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2150]
gi|126704193|gb|EBA03285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2150]
Length = 359
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 165/361 (45%), Positives = 228/361 (63%), Gaps = 13/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +++FDLP + IA RP PR +AR++ V + S D V+DL LN+ D +V
Sbjct: 1 MKLSDYNFDLPETLIATRPAVPRTAARMLHVAGDDSV-----DLSVTDLTDLLNAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NNTKVI A+L G RF +I TL + W +P K +K+G+ + F
Sbjct: 56 LNNTKVIPARLFGQRFRQGDAGATSAKIEMTLLSPTTDGHWQALVKPLKKVKEGEEVVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+L A +I K G ++ F+ G + + ++ VG +PLPPYIA KR D +D++
Sbjct: 116 E-----KLSAKLISKA-DGMSVVAFNQQGRDFDEALAEVGKMPLPPYIAAKRAADQQDHI 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL ++ + G+ + +VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVFAQTTGAVAAPTASLHFDQELLDKIRAKGVNITYVTLHVGAGTFLPVKVDDISQH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A+A+ +GGR++ VGTT+LRL+ETA E+G I+PW G T+IFI
Sbjct: 230 KMHSEWGEVTDGAAKAIMQTHEQGGRVIPVGTTALRLIETAADENGKISPWVGDTDIFIH 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ D LM+NFHLPKSTL+MLVSA G K++Y HAI H YRF+SYGD+SLL
Sbjct: 290 PGYEFKVTDALMTNFHLPKSTLMMLVSALMGQSRIKEVYSHAIEHKYRFFSYGDSSLLCP 349
Query: 359 K 359
+
Sbjct: 350 E 350
>gi|313901951|ref|ZP_07835368.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter subterraneus DSM 13965]
gi|313467797|gb|EFR63294.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter subterraneus DSM 13965]
Length = 358
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 144/359 (40%), Positives = 212/359 (59%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD+DLPP IA +P+ RD++RLMVV + L DLP FL + D +V
Sbjct: 1 MRVDEFDYDLPPELIAQQPLARRDASRLMVVDRDTGRWL---HARFRDLPRFLRAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V A+L G R ++ L + W ARP + ++ G +
Sbjct: 58 LNDTRVRPARLYGRR-----PTGGQVEFLLLQPLDGGRWLALARPGRRVRPGTEVVCGE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L V + ++GE ++ G ++ + +G +PLPPYI + D
Sbjct: 112 --ERPLRVYVEEARDSGERVIRLEPPPGETVDETLHRLGRVPLPPYI----RAELEDPER 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ +GSVAAPTAGLHFT LL RL G+++ ++TLHVG GTF PV E ++H
Sbjct: 166 YQTVYAREEGSVAAPTAGLHFTPELLKRLQDQGVRIAYLTLHVGVGTFRPVTAERVEEHQ 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E ++ A+A+N+ ++ GGR+++VGTT R LET G + P SG+T++FI P
Sbjct: 226 MHAEFYRVEPAAAEAINAARAAGGRVIAVGTTVTRTLETVAAAGGTVRPGSGWTDLFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GYRF+A+D L++NFHLP+STL+MLV+A G E+T Y+ A++ YRF+S+GD L+
Sbjct: 286 GYRFKAIDGLITNFHLPRSTLIMLVAALLGKEQTLAAYREAVARRYRFFSFGDAMLILP 344
>gi|294677090|ref|YP_003577705.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
capsulatus SB 1003]
gi|294475910|gb|ADE85298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
capsulatus SB 1003]
Length = 350
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 163/360 (45%), Positives = 223/360 (61%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP RIA+RP PR +A+L+V P I D V+DLP L D +V
Sbjct: 1 MNLSDFDFELPEGRIAIRPARPRTAAKLLVA-----TPDAIRDLTVADLPDLLGPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N TKVI A+L+G R + E + TL W A+P + +K+G+ + F
Sbjct: 56 LNTTKVIPARLSGRRTRQSAQGEVVARVEVTLLEPAPGGDWMALAKPLRKLKEGEEIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A I G++ + F+++G + + ++ G +PLPPYIA R D +D
Sbjct: 116 D-----ALSAR-IAAIAEGQMRIRFNLTGPDFDAALAEAGAMPLPPYIAALRAPDEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHFT +LL +L G++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQKPGAVAAPTASLHFTPDLLEKLRDKGVQFTEVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A +N+ K+ GGR++ VGTT+LRL+E+A T G+I P++ T+IFI
Sbjct: 230 RMHAEWGEVTPQAAAEINATKAAGGRVIPVGTTALRLIESAATGPGVIAPFAATTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 290 PGYRFRIADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALTKNYRFFSYGDASLLLP 349
>gi|330431785|gb|AEC16844.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gallibacterium anatis UMN179]
Length = 356
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 143/365 (39%), Positives = 200/365 (54%), Gaps = 16/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N S H D+ F+N D +V
Sbjct: 1 MRVSDFYFDLPDELIARYPQKERTASRLLKLDGNSG---EFSHHHFKDVLDFVNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K+G L
Sbjct: 58 FNNTRVIPARMYGRKSS-----GGKVEVLVERVLDQKSCLAHIRASKAPKEGSELILGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + +G IPLPPYI RP + D Y
Sbjct: 113 KLGEGNGVRARMVGRSDSLFHLQFDIEGSLLDTLQQIGHIPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI G+VAAPTAGLHF LL+ L + G+K+ FVTLHVGAGTF PV+VE+ +DH M
Sbjct: 171 QTVYSKIPGAVAAPTAGLHFDEELLAALRAKGVKMAFVTLHVGAGTFQPVRVENIEDHHM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFTN 294
HSE + A+ + K+ G R+++VGTTS+R LE+A +I P+ T
Sbjct: 231 HSEYAEVPQEVVDAVLATKAAGKRVIAVGTTSVRSLESAALAAEEKQSMQLIEPFFADTA 290
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG +FR VD L++NFHLP+STL+MLVSAF G + + Y++A+ + YRF+SYGD
Sbjct: 291 IFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYDNIMRAYRNAVENRYRFFSYGDAM 350
Query: 355 LLFQK 359
L +K
Sbjct: 351 FLIKK 355
>gi|298369998|ref|ZP_06981314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sp. oral taxon 014 str. F0314]
gi|298281458|gb|EFI22947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sp. oral taxon 014 str. F0314]
Length = 343
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 155/358 (43%), Positives = 215/358 (60%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA P R +RL+ P+ + + D SDLP ++ + D +V
Sbjct: 1 MDISDFDFDLPQALIAQHPPKVRGGSRLLAALPD----MPLQDAAFSDLPDYIGAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G +L F
Sbjct: 57 FNNTKVMKARLFGQKES-----GGKIEALIERVLDGHTALAHIRSSKSPKAGTVLIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A +I++ G++ + G + + G +PLPPYI R D D Y
Sbjct: 109 --EGGIRAVMIER--AGDLFCLRFDCGQTVYELLEQNGRLPLPPYIE--RAADDDDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V + DH M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVSNIADHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + ++RGGR+ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPPETVAAIEAAQARGGRVWAVGTTSMRALESAARETGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLV+AF G+E + +Y+HA+ H YRF+SYGD LL +
Sbjct: 283 YRFNVADRLITNFHLPKSTLLMLVAAFSGMEHIRAVYRHAVEHEYRFFSYGDAMLLGR 340
>gi|296840698|ref|ZP_06863236.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
polysaccharea ATCC 43768]
gi|296840202|gb|EFH24140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
polysaccharea ATCC 43768]
Length = 356
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 153/358 (42%), Positives = 211/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVGEGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPDTKLIF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EA ++++ GE+ + S + + G +PLPPYI R DA D Y
Sbjct: 119 --EGGIEAVMLER--VGELFCLRFNSKQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G++ VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGVETAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVGAAKARGNKVWAVGTTSMRALESAARETGHLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLVSAF G+ + +Y+HA+ YRF+SYGD +L +
Sbjct: 293 YRFNVADRLITNFHLPKSTLLMLVSAFSGMGHIRAVYRHAVEREYRFFSYGDAMILGR 350
>gi|313892068|ref|ZP_07825666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
microaerophilus UPII 345-E]
gi|329120931|ref|ZP_08249563.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
micraerophilus DSM 19965]
gi|313119520|gb|EFR42714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
microaerophilus UPII 345-E]
gi|327471390|gb|EGF16841.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
micraerophilus DSM 19965]
Length = 339
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 211/356 (59%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ F+++LP S IA PV PRDS +LMV+ +S H+ +D+ + ND IV
Sbjct: 1 MKLENFNYELPESLIAQEPVEPRDSCKLMVLDKETG---HLSHHVFTDILDEIKENDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+LNG R + ++ L + W V P + G + F
Sbjct: 58 FNNTKVIPARLNGYR----KQTGGKVEVLLLTPKGNDEWEVLVNPGRKALIGQEIIFSD- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V+DK + G + F G + + + VG +P+PPYI +K ++ +Y
Sbjct: 113 ----KFYCVVLDKTDFGGRRVKFYYDG-DFDLLLDEVGEMPIPPYIHKK----LKNKEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFTS L++++ G ++ FVTLHVG GTF PV E+ +DH M
Sbjct: 164 QTVYAKYKGSAAAPTAGLHFTSELINKIKEKGAEICFVTLHVGLGTFRPVNEENIEDHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA A+N K G RI++VGTTS+R LE+A + G + + +TN++I PG
Sbjct: 224 HKEWYVISEQTADAINKAKKEGRRIIAVGTTSVRTLESA-GQSGKLKAGANWTNLYIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y ++ VD +++NFHLP+STLLM++++F G ++ Y+ A++ YRF+S+GD L
Sbjct: 283 YSWKIVDAIITNFHLPESTLLMMMASFVGTDKILNAYKEAVAKKYRFFSFGDAMFL 338
>gi|15903316|ref|NP_358866.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae R6]
gi|307068069|ref|YP_003877035.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Streptococcus pneumoniae AP200]
gi|15458913|gb|AAL00077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae R6]
gi|306409606|gb|ADM85033.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine
synthetase) [Streptococcus pneumoniae AP200]
Length = 346
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 202/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 5 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 62 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I + +G +PLPPYI K Y
Sbjct: 115 -GDGRLSAVVTEELTHGGRIVRFEYQRI-FLEVLESLGEMPLPPYIHEKLDD----RERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 169 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 229 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 289 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 346
>gi|309781308|ref|ZP_07676044.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
sp. 5_7_47FAA]
gi|308919721|gb|EFP65382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
sp. 5_7_47FAA]
Length = 356
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 207/356 (58%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V + D +DL +L D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPDRTASRLLAVRR-AGDAVHFEDRQFADLVDYLRPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+ G + ++ + + ++ R SK +G L
Sbjct: 63 DTRVIKARFFGQKAS-----GGKVEVLVERLLDEHTVLAQIRSSKSPVEGTTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L F ++L I G +PLPPYI ++ D YQT
Sbjct: 118 ------VTVGPRAEPFFTLRFPQPALDL---IEQYGRLPLPPYIEHD--PNSFDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L ++L ++GI+ F+TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYARNPGAVAAPTAGLHFDDALFAKLDAMGIQRGFLTLHVGAGTFQPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+ + ++ GGRI++VGTTS+R LE+A DG +N SG T+IFITPGYR
Sbjct: 227 EWYEITPELAEAIRATRAAGGRIIAVGTTSMRALESAAQPDGTLNACSGETDIFITPGYR 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FRAVD+L++NFHLPKSTLLMLVSAF G+ ++ YQHAI+ YRF+SYGD LL +
Sbjct: 287 FRAVDLLVTNFHLPKSTLLMLVSAFAGMSAIREAYQHAIAQRYRFFSYGDAMLLTR 342
>gi|171778635|ref|ZP_02919731.1| hypothetical protein STRINF_00583 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282592|gb|EDT48016.1| hypothetical protein STRINF_00583 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 342
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+V+ + D + LNS DA+V
Sbjct: 1 MHTDDFDFNLPEELIAQTPLEKRDSSKLLVIDHKT---HEMVDAHFDHILDELNSGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K + G + F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTEGDQWEVLAKPAKRLHVGVKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELDNGGRIVEFDYDGI-FLEVLESLGEMPLPPYIHEKLDD----PNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ +VTLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIEAKGVKLVYVTLHVGLGTFRPVSVDNVEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYRLSEEAAQTLRDVKATGGRVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD +
Sbjct: 285 GYDFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDERYRFFSFGDAMFV 341
>gi|227825068|ref|ZP_03989900.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase
[Acidaminococcus sp. D21]
gi|226905567|gb|EEH91485.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase
[Acidaminococcus sp. D21]
Length = 339
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 138/356 (38%), Positives = 197/356 (55%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA P+ PRD++RL+V+ + +LP +L D +V
Sbjct: 1 MEVTDFDYDLPKELIAQTPIEPRDASRLLVMDKKTGA---LEHRHFYNLPEYLRPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L+G + + L R + W V +P K +++G + F +
Sbjct: 58 FNDTRVMPARLHGTK-----TTGAHVEVFLLTRKNNTDWEVLVKPGKKLQEGAEIIFSDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L T+++K + G + F G+ E + +G PLPPYI K Y
Sbjct: 113 -----LSCTILEKTDFGGRIARFRFDGV-FEEILDRLGETPLPPYIHEKLKD----KERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + GS AAPTAGLHFT L+ ++ +G++ FVTL+VG GTF PV E +DH M
Sbjct: 163 QTVYNRELGSAAAPTAGLHFTKELMQKIKEMGVEEVFVTLNVGLGTFRPVSEERIEDHEM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A ALN K G RI++VGTTS+R LE+A G + P +T IFI PG
Sbjct: 223 HSEFYTVSPEAAAALNRAKKEGRRIIAVGTTSVRTLESAGAS-GTMVPGGNWTKIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F VD L++NFHLP+STL+MLVSA E Y A+ YRF+S+GD +
Sbjct: 282 FKFHFVDALVTNFHLPQSTLIMLVSALSSRENILHAYGEAVKEKYRFFSFGDAMFI 337
>gi|329577860|gb|EGG59281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1467]
Length = 343
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 146/355 (41%), Positives = 203/355 (57%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---MEDKHFHDIHDELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
T+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 ITRVLPARLYGEKP----ETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLKAVVKEELEHGGRIIEFKYDGI-FLEILESLGEMPLPPYIKERLDD----PDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GS AA TAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H MHS
Sbjct: 168 VYAEENGSAAASTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD +
Sbjct: 288 QFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGDAMFI 342
>gi|228993157|ref|ZP_04153079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudomycoides DSM 12442]
gi|228999207|ref|ZP_04158788.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock3-17]
gi|228760552|gb|EEM09517.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock3-17]
gi|228766616|gb|EEM15257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudomycoides DSM 12442]
Length = 350
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEQRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G I+ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEDGDKWETLVKPAKRVKEGTIISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVHLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCATSGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFASRENVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|229006754|ref|ZP_04164388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock1-4]
gi|228754615|gb|EEM04026.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock1-4]
Length = 350
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEQRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G I+ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEDGDKWETLVKPAKRVKEGTIISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEELKKKGVHLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCATSGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFASRENVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|163760249|ref|ZP_02167332.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hoeflea
phototrophica DFL-43]
gi|162282648|gb|EDQ32936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hoeflea
phototrophica DFL-43]
Length = 359
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 210/361 (58%), Positives = 250/361 (69%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IALRP PRDSAR++ V P+ +SD +V DL A L DA+V
Sbjct: 1 MRVDLFDFHLPDESIALRPASPRDSARMLCVAPDGG----LSDAIVRDLAAQLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R N+ +S TLHMR P+ W + RP K IK GD L F
Sbjct: 57 FNDTRVIPAQLEGFRNRGDNQV--RVSATLHMRSGPDRWKAFVRPGKRIKPGDRLSFGGD 114
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
Q L+AT ++ GEI L+F +SG L+ I G IPLPPYIA KR DA+D
Sbjct: 115 GSACLQGVLDATAGERGEGGEIELIFDLSGPALDEAIMATGHIPLPPYIASKRGEDAQDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ G+VAAPTAGLHFT L + L + GI +FVTLHVGAGTF+PVK +DT +
Sbjct: 175 KDYQTIYAREDGAVAAPTAGLHFTDALFASLDARGIVRHFVTLHVGAGTFLPVKADDTAE 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSEIG + A TA ALN V++ GGRIVSVGTTSLRLLE+A E+G I PWSG T+IFI
Sbjct: 235 HRMHSEIGHVSAETAAALNQVRASGGRIVSVGTTSLRLLESAADENGTIQPWSGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAFCG+E + Y HAI YRFYSYGD+SLLF
Sbjct: 295 TPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLETMRAAYDHAIETGYRFYSYGDSSLLF 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|317121691|ref|YP_004101694.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter marianensis DSM 12885]
gi|315591671|gb|ADU50967.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter marianensis DSM 12885]
Length = 353
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 210/359 (58%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA P+ RD++RLMVV + + DLP FL + D +V
Sbjct: 1 MRVDEFDYELPPELIAQEPLPRRDASRLMVVDRDSGRWI---HAHFRDLPRFLRAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V A+L G R + L + W ARP + ++ G +
Sbjct: 58 LNDTRVRPARLYGRR-----TTGGHVEFLLLQPLDDGRWLALARPGRRLRPGTEVVCGE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L V + ++GE ++ G ++ + +G +PLPPYI + +D
Sbjct: 112 --ERPLRVRVEEVRDSGERVIRLEPPQGETVDETLHRLGRVPLPPYI----RTELKDPER 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ +GSVAAPTAGLHFT LL L G+++ ++TLHVG GTF PV + ++H
Sbjct: 166 YQTVYAREEGSVAAPTAGLHFTPELLEELQDQGVRIAYLTLHVGVGTFRPVTAQRVEEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E ++ A A+N+ +S GGR+++VGTT R LET +DG + P SG+T++FI P
Sbjct: 226 MHAEFFRVEPEAAAAINAARSAGGRVIAVGTTVTRTLETVAADDGTVRPGSGWTDLFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GYRF+A+D L++NFHLP+STL+MLV+A G E T Y+ A++ YRF+S+GD L+
Sbjct: 286 GYRFKAIDGLITNFHLPRSTLIMLVAALLGKERTLAAYREAVARRYRFFSFGDAMLILP 344
>gi|77919491|ref|YP_357306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pelobacter
carbinolicus DSM 2380]
gi|91207389|sp|Q3A3C1|QUEA_PELCD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77545574|gb|ABA89136.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pelobacter
carbinolicus DSM 2380]
Length = 343
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 135/359 (37%), Positives = 200/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P+ R ++RLMV++ + +D+ + D +V
Sbjct: 1 MRLSDFDFELPEELIAQHPLAQRQASRLMVLNRVTQ---QLQLAQFADIADWFRPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G + + I L R+ W+ + SK + G L
Sbjct: 58 VNDTRVIPARLIGRK-----QTGGRIEVFLVRRLPGVEEVWACLTKCSKSPRPGTRLILG 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
LE TV++ + FS G + + + VG IPLPPYI R+ D
Sbjct: 113 EG-----LEGTVVEGGEPPYRHVRFSFQG-DFSQVLEQVGRIPLPPYIRREATPDD--RS 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ G+VAAPTAGLHFT +L L + G+++ +TLHVG GTF+P++ +D +H
Sbjct: 165 RYQTVFAREAGAVAAPTAGLHFTDEILDVLRAKGVEIQPLTLHVGLGTFLPMRTDDITEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E F+ TA A+N K G R++++GTTS R LE A E G + +G ++FI
Sbjct: 225 RMHEENYFVPEGTAAAVNRAKDDGRRVIALGTTSTRTLEYAVDEQGRLQAGAGTCDLFIR 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++FR VD L++NFHLP STLL+LV+A G E + YQ A++ +RF+SYGD L+
Sbjct: 285 PGFKFRIVDGLVTNFHLPCSTLLVLVAALAGREFILEAYQRAVAEKFRFFSYGDCMLIL 343
>gi|306833044|ref|ZP_07466176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus bovis ATCC 700338]
gi|304424943|gb|EFM28077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus bovis ATCC 700338]
Length = 342
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+V+ + D + LN DA+V
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDHKT---HEMVDAHFDHILDELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTQGDQWEVLAKPAKRLRVGVKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F+ GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVVEELDHGGRVVEFAYDGI-FLEVLESLGEMPLPPYIHEKLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQDLLAKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAQTLRDVKAAGGRVVAVGTTSIRTLETIGSKFNGDIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD +
Sbjct: 285 GYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYQHAIDEHYRFFSFGDAMFV 341
>gi|257425764|ref|ZP_05602188.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257428424|ref|ZP_05604822.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257431062|ref|ZP_05607441.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 68-397]
gi|257433748|ref|ZP_05610106.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus E1410]
gi|257436663|ref|ZP_05612707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M876]
gi|282914445|ref|ZP_06322231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M899]
gi|282924791|ref|ZP_06332457.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C101]
gi|293503518|ref|ZP_06667365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 58-424]
gi|293510537|ref|ZP_06669242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M809]
gi|293537080|ref|ZP_06671760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M1015]
gi|257271458|gb|EEV03604.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257275265|gb|EEV06752.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257278265|gb|EEV08907.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 68-397]
gi|257281841|gb|EEV11978.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus E1410]
gi|257284014|gb|EEV14137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M876]
gi|282313157|gb|EFB43553.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C101]
gi|282321626|gb|EFB51951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M899]
gi|290919925|gb|EFD96993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M1015]
gi|291095184|gb|EFE25449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 58-424]
gi|291466428|gb|EFF08949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M809]
Length = 341
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMCLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|73662428|ref|YP_301209.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|91207328|sp|Q49Y78|QUEA_STAS1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|72494943|dbj|BAE18264.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 341
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FD+ LP + IA P+ RD +RL+++ I D+ +LN D +V
Sbjct: 1 MDIEAFDYHLPEALIAQTPLKNRDESRLLILGRQSG---YIEHKHFKDVTDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGMK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I++ + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GEGKIIAECIEELDQGGRIMRLHYDGI-LQERLDELGEMPLPPYIKERLDDQ----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL R+ + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKASGSAAAPTAGLHFTDELLERIKAQGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA LNS + G RI+SVGTTS R LET SG+T+IFI PG
Sbjct: 225 HSEYYQMDEATANLLNSTRDNGNRIISVGTTSTRTLETIMQSSDRFVAKSGWTDIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A++ YRF+S+GD L+
Sbjct: 285 FNFKAIDGLITNFHLPKSTLVMLVSAFSSRDYIINAYNQAVASEYRFFSFGDAMLII 341
>gi|325127517|gb|EGC50443.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis N1568]
Length = 346
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF P++V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPMRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMILGR 340
>gi|209549347|ref|YP_002281264.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|226713846|sp|B5ZPR8|QUEA_RHILW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209535103|gb|ACI55038.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 379
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 215/378 (56%), Positives = 255/378 (67%), Gaps = 20/378 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLS----------------CPLVISDH 44
M V FDFDLP RIALRP PRDSARL+VV+P+ SDH
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESRPHAESVPHAESRPHAESAFSDH 60
Query: 45 LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR 104
V DLP+FL + DA+VFN+TKVI AQL G+R +++S TLHMRV P+ W +A+
Sbjct: 61 RVGDLPSFLRAGDALVFNDTKVIPAQLEGIRHRDGA-GGQQVSATLHMRVGPSRWKAFAK 119
Query: 105 PSKVIKKGDILHFFSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIP 161
P K IK+GD + F L+ATV +K GE+ L F +SG L+ I+ VG IP
Sbjct: 120 PGKRIKEGDRIAFGHSGESCLLGSLDATVEEKGEAGEVTLAFDLSGPALDEAIAAVGHIP 179
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
LPPYIA KRP D RD DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLH
Sbjct: 180 LPPYIAAKRPEDERDRADYQTIYAREEGAVAAPTAGLHFTPALFEALDRAGIERHFVTLH 239
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
VGAGTF+PVK +DT DH MH E G + A TA LN+VK+RGGRIV VGTTSLRL+E+A
Sbjct: 240 VGAGTFLPVKADDTADHKMHLESGTVSAETAARLNAVKARGGRIVCVGTTSLRLIESAAE 299
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
E G I WSG T IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAI
Sbjct: 300 ESGEIRGWSGATGIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYKHAI 359
Query: 342 SHAYRFYSYGDTSLLFQK 359
S YRFYSYGD SLLF+K
Sbjct: 360 STGYRFYSYGDASLLFRK 377
>gi|326693303|ref|ZP_08230308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
argentinum KCTC 3773]
Length = 353
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 139/358 (38%), Positives = 204/358 (56%), Gaps = 13/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RD++RL+V+ + D D+ ++ DAIV
Sbjct: 7 QLSDFDYDLPEALIAQTPLKQRDASRLLVLDADTGAYD---DKHFYDILDYVEPGDAIVM 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+G R L + + W +P+K G + F
Sbjct: 64 NNSRVLPARLHGARP----ETGGHAEVLLLRQDHGDVWETLVKPAKKSPIGSTIVFGDDI 119
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ATV+ + G + F GI + +G +PLPPYI K YQ
Sbjct: 120 NNPIMTATVVGELEHGGRYIEFHYDGI-FMELLEKLGEMPLPPYIKEKLDDQ----ERYQ 174
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+TS LL ++ + G+K +TLHVG GTF PV+ E+ +DH MH
Sbjct: 175 TVYSKVDGSAAAPTAGLHWTSELLDKVRAKGVKTVELTLHVGLGTFRPVEEENIEDHKMH 234
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V + GGRI++ GTTS+R LET ++ DG + SG+T+IFI PG
Sbjct: 235 SEFYQLTQEAADTLNDVHANGGRIIATGTTSIRTLETIGSKFDGHLQADSGWTDIFIKPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y++ VD ++NFHLPKSTL+MLV+AF G + K Y+HA++ YRF+S+GD + +
Sbjct: 295 YQWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILKAYEHAVADQYRFFSFGDAMFVKR 352
>gi|261346393|ref|ZP_05974037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rustigianii DSM 4541]
gi|282565711|gb|EFB71246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rustigianii DSM 4541]
Length = 358
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ + ++ + +D+ L D +V
Sbjct: 1 MRVSDFTFELPEELIAHYPQAERSSCRLLSLDGATG---QLTHGVFTDILEKLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDEHRVLAHVRASKAPKEGAALLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + G + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---VNATMVAR--HGALFELRFDDARDVLSILNQIGHMPLPPYI--DRPDEESDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLEALRQKGIEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ VD L++NFHLP+STL+MLVSAF G + T + YQ A+ YRF+SYGD +
Sbjct: 286 PGYQYQVVDALITNFHLPESTLIMLVSAFAGYKNTMQAYQEAVEQKYRFFSYGDAMFITP 345
>gi|152987013|ref|YP_001346673.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PA7]
gi|166216738|sp|A6V0T8|QUEA_PSEA7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150962171|gb|ABR84196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PA7]
Length = 347
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 196/358 (54%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGS---LAHKQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQHRVLAHVRASKAPKPGTRILVEGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ L + + VG +PLPPYI RP DA D Y
Sbjct: 113 GSAEMLQ---------RHDALFELAFAEPVLPLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSYGDAMFITR 338
>gi|229086981|ref|ZP_04219138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-44]
gi|228696357|gb|EEL49185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-44]
Length = 350
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEDGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVHLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG I SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDNDGKICGASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRENVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|283470916|emb|CAQ50127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ST398]
Length = 341
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSNRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|15924630|ref|NP_372164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu50]
gi|15927220|ref|NP_374753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus N315]
gi|21283319|ref|NP_646407.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MW2]
gi|49483884|ref|YP_041108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49486473|ref|YP_043694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MSSA476]
gi|148268120|ref|YP_001247063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH9]
gi|150394188|ref|YP_001316863.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH1]
gi|156979958|ref|YP_001442217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu3]
gi|253317209|ref|ZP_04840422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|255006425|ref|ZP_05145026.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|258438213|ref|ZP_05689497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9299]
gi|258443676|ref|ZP_05692015.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8115]
gi|258446883|ref|ZP_05695037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6300]
gi|258448797|ref|ZP_05696909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6224]
gi|258453753|ref|ZP_05701728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5937]
gi|269203265|ref|YP_003282534.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ED98]
gi|282893144|ref|ZP_06301378.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8117]
gi|282904220|ref|ZP_06312108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C160]
gi|282906046|ref|ZP_06313901.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282916908|ref|ZP_06324666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus D139]
gi|282928275|ref|ZP_06335880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A10102]
gi|283958400|ref|ZP_06375851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus A017934/97]
gi|295406761|ref|ZP_06816566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8819]
gi|295428215|ref|ZP_06820847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|296275925|ref|ZP_06858432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MR1]
gi|297245656|ref|ZP_06929521.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8796]
gi|54038976|sp|P65951|QUEA_STAAN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54038977|sp|P65952|QUEA_STAAW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54041780|sp|P65950|QUEA_STAAM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56749512|sp|Q6G8S9|QUEA_STAAS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56749559|sp|Q6GG64|QUEA_STAAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207405|sp|Q2YT90|QUEA_STAAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218744|sp|A7X356|QUEA_STAA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038882|sp|A6U2A8|QUEA_STAA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038883|sp|A5ITG4|QUEA_STAA9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13701438|dbj|BAB42732.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus N315]
gi|14247412|dbj|BAB57802.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus Mu50]
gi|21204759|dbj|BAB95455.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus MW2]
gi|49242013|emb|CAG40711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244916|emb|CAG43377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MSSA476]
gi|147741189|gb|ABQ49487.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH9]
gi|149946640|gb|ABR52576.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH1]
gi|156722093|dbj|BAF78510.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus Mu3]
gi|257848257|gb|EEV72248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9299]
gi|257851082|gb|EEV75025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8115]
gi|257854458|gb|EEV77407.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6300]
gi|257858075|gb|EEV80964.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6224]
gi|257864073|gb|EEV86826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5937]
gi|262075555|gb|ACY11528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ED98]
gi|282319395|gb|EFB49747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus D139]
gi|282331338|gb|EFB60852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282590082|gb|EFB95164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A10102]
gi|282595838|gb|EFC00802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C160]
gi|282764462|gb|EFC04588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8117]
gi|283790549|gb|EFC29366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285817322|gb|ADC37809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus 04-02981]
gi|294968508|gb|EFG44532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8819]
gi|295128573|gb|EFG58207.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|297177307|gb|EFH36559.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8796]
gi|302333313|gb|ADL23506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JKD6159]
gi|312830026|emb|CBX34868.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129925|gb|EFT85915.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus CGS03]
gi|315195543|gb|EFU25930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus CGS00]
gi|329727664|gb|EGG64120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 21172]
gi|329733065|gb|EGG69402.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 21193]
Length = 341
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|322412116|gb|EFY03024.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 342
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHEQKT---MIDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKL----DTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ F+ GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFNYEGI-FLEVLESLGEMPLPPYIHEKLDD----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LLS++ + G+ + ++TLHVG GTF PV VE+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLSKIEAKGVHLVYLTLHVGLGTFRPVSVENLDDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGRIV+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRIVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGDAMFV 341
>gi|296387660|ref|ZP_06877135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PAb1]
Length = 347
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 198/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQHRVLAHIRASKAPKPGTRILVEGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ L + + VG +PLPPYI RP DA D Y
Sbjct: 113 GSAEMLQ---------RHDALFELAFAEPVLPLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVSACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYDAAVAQGYRFFSYGDAMFITR 338
>gi|326794831|ref|YP_004312651.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
mediterranea MMB-1]
gi|326545595|gb|ADZ90815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
mediterranea MMB-1]
Length = 353
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 137/358 (38%), Positives = 199/358 (55%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ F+LP IA P+ R S+RL+ +H + + SD+ + + D +V
Sbjct: 1 MKVSDYHFNLPDELIARYPMPERSSSRLLQLHGQTG---ELKHGVFSDVLSLVEPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + +S + R SK K G+ L+ +
Sbjct: 58 FNNTRVIPARVFGQKAS-----GGKVEVLVERLLSSTEILAHVRASKSPKPGNELYLGTD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+S +A ++++ L + + VG +PLPPYI RP + D Y
Sbjct: 113 RNES-FKAVMVERDAN----LFRLQFENPVLEVLEKVGHMPLPPYIE--RPDEDSDQERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PVKV+D DHIM
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDELLEKLAEKGVDTAFVTLHVGAGTFQPVKVDDVKDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + K+ G R+++VGTTS+R LE+A+ G I P + T+IFI PG
Sbjct: 226 HSEYAEVSQEVVDKVRQAKANGKRVIAVGTTSVRSLESASQS-GQIEPMADDTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ VD L++NFHLP+STL+ML+SAF G Y+ A+ YRF+SYGD + +
Sbjct: 285 YEFKTVDALVTNFHLPESTLIMLISAFAGYSNVMAAYKAAVDEKYRFFSYGDAMFITR 342
>gi|313890811|ref|ZP_07824436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pseudoporcinus SPIN 20026]
gi|313120912|gb|EFR44026.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pseudoporcinus SPIN 20026]
Length = 342
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDSSKLLIIDHK---AKTMVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGEKP----DTHGHVELLLLKNIQGDDWEVLAKPAKRLKVGSSISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATVIKELEHGGRIVSFSYQGI-FLEVLESLGEMPLPPYIHEKLDDS----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQALLQKIQEKGVHLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK GGR+V+VGTTS+R LET + +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAADTLRQVKKAGGRVVAVGTTSIRTLETIGNKFNGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRF VD +NFHLPKSTL+MLVSAF G E + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYRFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAINEHYRFFSFGDAMFV 341
>gi|300172986|ref|YP_003772152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
gasicomitatum LMG 18811]
gi|299887365|emb|CBL91333.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
gasicomitatum LMG 18811]
Length = 353
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 140/358 (39%), Positives = 208/358 (58%), Gaps = 13/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RDS+RL+V+ + + D D+ ++N DAIV
Sbjct: 8 QLADFDYDLPETLIAQTPLKQRDSSRLLVLDADTG---LYEDKHFYDILDYVNPGDAIVM 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+GVR L + + W +P+K G + F +
Sbjct: 65 NNSRVLPARLHGVRP----ETGGHAEVLLLRQDHGDVWETLVKPAKKSPVGSTIFFGNDI 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ATV+ + G + F GI + +G +PLPPYI K YQ
Sbjct: 121 DNPVMTATVVGELEHGGRYIEFHYEGI-FMELLEKLGEMPLPPYIKEKLADQ----ERYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+T LL ++ + G++ +TLHVG GTF PV+ E+ +DH MH
Sbjct: 176 TVYSKVDGSAAAPTAGLHWTPELLDKVRAKGVQTIELTLHVGLGTFRPVEEENIEDHKMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + + A ALN V + GGRI++ GTTS+R LET ++ +G + SG+T+IFI PG
Sbjct: 236 SEFYQLSSEAADALNKVHATGGRIIATGTTSIRTLETIGSKFNGQLQADSGWTDIFIKPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y++ VD ++NFHLPKSTL+MLV+AF G + YQHA++ YRF+S+GD + +
Sbjct: 296 YQWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYQHAVNDKYRFFSFGDAMFIKR 353
>gi|149191582|ref|ZP_01869828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
shilonii AK1]
gi|148834600|gb|EDL51591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
shilonii AK1]
Length = 350
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 195/363 (53%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPKAERSSSRLLQLTGNTG---EVVDGSFTDIVDQVQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDDKRVLAHVRSSKAPKPGTELFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L D E+ S + ++ +G +PLPPYI RP + D Y
Sbjct: 113 DEYQALMVARHDALFEIEM-----QSEKTVLDILNDIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L ++ + G+ +VTLHVGAGTF PV+VE+ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDAVLEKIKAKGVNFAYVTLHVGAGTFQPVRVENINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN----PWSGFTNIF 296
H+E + A+N K+ GGRI++VGTTS+R LE+A + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINETKANGGRIIAVGTTSVRSLESAAQDALKNGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD +
Sbjct: 286 IFPGYEYQLVDCLVTNFHLPESTLIMLVSAFAGYDNVMSAYHHAVEQKYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TKK 348
>gi|212696227|ref|ZP_03304355.1| hypothetical protein ANHYDRO_00763 [Anaerococcus hydrogenalis DSM
7454]
gi|212676856|gb|EEB36463.1| hypothetical protein ANHYDRO_00763 [Anaerococcus hydrogenalis DSM
7454]
Length = 340
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 198/356 (55%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD++LP IA P RD +RLMVV D D+ +LN D +V
Sbjct: 1 MRTEDFDYNLPEELIAQHPADKRDFSRLMVVDRKTGQR---EDKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R +E++I L + + W V +P K +K G F +
Sbjct: 58 MNDTRVIPARLFGHRP----EKEEKIEVFLLENIEKDKWEVLVKPGKKMKIGTKCIFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+D G ++ FS GI + + +G +PLPPYI K Y
Sbjct: 114 -----LSLEVVDIKEDGNRVVEFSYEGI-FQEILDRLGNMPLPPYIKEKLKD----KERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ F+TL+VG GTF PVKV+D +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEDKGVKLAFITLNVGLGTFRPVKVDDVKNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +A +N K RI+S GTT+ R LE+ ++G I SG+T+IFI PG
Sbjct: 224 HSEYYQISKESADLINETKKNNKRIISTGTTTTRTLESVFKKNGQIKEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F +D ++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 284 FKFNVIDCQITNFHLPKSTLIMLVSALANKEIILDAYKDAVEKKYRFFSFGDAMFL 339
>gi|240013360|ref|ZP_04720273.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI18]
gi|240120433|ref|ZP_04733395.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID24-1]
Length = 346
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 206/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVA----LSDMPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGR 340
>gi|146308536|ref|YP_001189001.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
mendocina ymp]
gi|166216740|sp|A4XY53|QUEA_PSEMY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145576737|gb|ABP86269.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas mendocina ymp]
Length = 347
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 196/358 (54%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R ++RL+ + + +DL L D +V
Sbjct: 1 MRVADFHFDLPESLIARHPLAERRASRLLQLDGPSGA---LRHGQFTDLLEQLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGRLEVLVERVLDQHRVLAHVRSSKSPKPGSQI-LIEG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L + + VG +PLPPYI RP D D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEPVLPLLERVGHMPLPPYI--DRPDDEADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAEKAGAVAAPTAGLHFDDELLAAIRAKGVETAFVTLHVGAGTFQPVRVERIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+V+VGTTS+R LETA + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQEVVDAVAACRARGGRVVAVGTTSVRSLETAAQSS-ELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y+ A+ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYAETMAAYRAAVEQGYRFFSYGDAMFITR 338
>gi|50914461|ref|YP_060433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10394]
gi|68053076|sp|Q5XBG3|QUEA_STRP6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|50903535|gb|AAT87250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10394]
Length = 342
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKT---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+ID+ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKATIIDELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAIDEKYRFFSFGDAMFV 341
>gi|225850942|ref|YP_002731176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Persephonella marina EX-H1]
gi|225644878|gb|ACO03064.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Persephonella marina EX-H1]
Length = 337
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 196/356 (55%), Gaps = 21/356 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D+ LP IA PV PRDS RLMV++ I + D+ +L D +V
Sbjct: 3 RLSDYDYRLPKELIAKYPVEPRDSCRLMVLNRKERT---IEHRIFRDIGDYLKEGDLLVL 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + +I L V+ N W + K +K+G ++
Sbjct: 60 NDTKVIPARLIGRKE-----TGAKIEIFLLKPVTENVWEALIKNIKRLKEGQVVIISED- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+++K + G+ ++ + G +++ I G IPLPPYI R + +D YQ
Sbjct: 114 ----FRVKLLEKLDEGKAVV--QLVGEDIKYLIEKYGHIPLPPYIE--REDEDKDRDYYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +AK +G+VA+PTAGLHFT LL +L GIK FVTLHVG GTF P+ VED H MH
Sbjct: 166 TVFAKKEGAVASPTAGLHFTEELLEKLKEKGIKTAFVTLHVGLGTFRPITVEDITKHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I T + K RG +V+VGTT +R LET GF++IFI P Y
Sbjct: 226 EEFYQIPEETLDLIRETKERGRSVVAVGTTVVRTLETYAQTGKK----EGFSDIFIYPPY 281
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD +++NFHLPKSTLL+LVSAF G + + Y+ A+ YRF+SYGD L+
Sbjct: 282 DFKIVDSMITNFHLPKSTLLLLVSAFAGRDFILEAYREAVEKRYRFFSYGDAMLIL 337
>gi|150396485|ref|YP_001326952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium medicae WSM419]
gi|166218742|sp|A6U8Y7|QUEA_SINMW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150028000|gb|ABR60117.1| Queuosine biosynthesis protein [Sinorhizobium medicae WSM419]
Length = 360
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 211/362 (58%), Positives = 256/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP +ALRP PRDSAR++VV P V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPEDSVALRPASPRDSARMLVVRP--GGEPVLEDRGVLDLPSFLRQGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR+ +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRYRG-EHISTPVSLTLHMRVAPDRWKAFARPARRLKPGDRVSFGHG 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V +K + GE+ L F +SG L+ I VG IPLPPYIA KR DARD
Sbjct: 118 GNACLLGSLDAMVEEKGDAGEVTLRFDLSGPSLDEAIMSVGHIPLPPYIASKRADDARDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L + L GI+ +FVTLHVGAGTF+PVK +DTDD
Sbjct: 178 TDYQTVYAREEGAVAAPTAGLHFTDRLFAMLDEAGIERHFVTLHVGAGTFLPVKADDTDD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH EIG +DA TA LN+V+ RGGR+V VGTTSLRL+E+A EDG I+ WSG T IFI
Sbjct: 238 HVMHEEIGHVDAVTAAKLNAVRERGGRVVCVGTTSLRLVESAAAEDGTIHAWSGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRA +LM+NFHLPKSTL MLVSAF G+E + Y HAI+ YRFYSYGD+SLLF
Sbjct: 298 TPGYRFRAAHMLMTNFHLPKSTLFMLVSAFAGLETMRDAYAHAIATGYRFYSYGDSSLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|227484944|ref|ZP_03915260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus lactolyticus ATCC 51172]
gi|227237099|gb|EEI87114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus lactolyticus ATCC 51172]
Length = 340
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 200/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFD+ LP IA P RD AR+MV+ D ++ +L + D +V
Sbjct: 1 MRTSEFDYYLPEELIAQHPTSKRDEARMMVLDRKSGER---EDKYFFEIIDYLKAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R +E++I L W V RP K +K G + F
Sbjct: 58 MNDTRVIPARLFGHRP----EKEEKIEVFLLNNTEGAKWEVLVRPGKKMKIGTEVIFSDD 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+D + G ++ F GI + +G +PLPPYI K + DY
Sbjct: 114 -----LSCKVVDVKDDGNRIVEFYYEGI-FNEILDRLGNMPLPPYIKEKLKDN----EDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ ++TL+VG GTF PV ++ +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLEKIEEKGVKLAYLTLNVGLGTFRPVNEDEITNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T++ LN KS G RI++VGTTS+R LE+ ++ I SG+T+IFI PG
Sbjct: 224 HSEFYTLSEETSKILNEAKSEGRRIIAVGTTSIRTLESVYKKNNKICADSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ VD +++NFHLPKSTL+ML++AF + Y+ A++ YRF+S+GD +
Sbjct: 284 FEFKVVDAIITNFHLPKSTLIMLIAAFTSKDIILDAYKDAVNKKYRFFSFGDCMFI 339
>gi|94994643|ref|YP_602741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10750]
gi|166218748|sp|Q1J5Y6|QUEA_STRPF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|94548151|gb|ABF38197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10750]
Length = 342
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKT---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+ID+ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKATIIDELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLKD----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|27468241|ref|NP_764878.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
epidermidis ATCC 12228]
gi|293366403|ref|ZP_06613082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W2(grey)]
gi|27315787|gb|AAO04922.1|AE016748_156 S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
epidermidis ATCC 12228]
gi|291319528|gb|EFE59895.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W2(grey)]
Length = 354
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 14 LNIEDFDYHLPESLIAQTPLKNRDQSRLLVLSKDTG---ELTHLHFRDVIHYFEPGDTLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 71 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 124 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH M
Sbjct: 178 QTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEM 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 238 HSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 297
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 298 FEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLII 354
>gi|254503766|ref|ZP_05115917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Labrenzia
alexandrii DFL-11]
gi|222439837|gb|EEE46516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Labrenzia
alexandrii DFL-11]
Length = 360
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 195/358 (54%), Positives = 251/358 (70%), Gaps = 6/358 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+L RIALRP PRD+AR++VV P +SD V DLPA L DA+V
Sbjct: 1 MRVDQFDFELSNERIALRPARPRDAARMLVVRP--GEIPELSDMGVRDLPALLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G R E IS TLH+R + + W + RP+K ++ D++ F +
Sbjct: 59 FNDTKVIPAQLEGKRVRG--DIEAGISVTLHLRSAADGWKAFVRPAKKLQVEDLVVF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+RL ATV +K + GE+LL F SG +L+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 GNGARLTATVKEKSDGGEVLLAFDCSGPDLDVAIAQVGHIPLPPYIAQKRGEDEQDRQDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL+ + GI+++ VTLHVGAGTF+PVK +DTDDH M
Sbjct: 175 QTIFAEKDGAVAAPTAGLHFTPELLAAIKDRGIEMHRVTLHVGAGTFLPVKADDTDDHKM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK+RG ++VS+GTTSLR+LE+A E G I P++ T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALQAVKARGNKVVSIGTTSLRILESAAQETGTIVPFADETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+F+A+D LM+NFHLP+STL MLVSA G+E + YQHAI YRFYSYGD SLLF
Sbjct: 295 YKFKAIDALMTNFHLPRSTLFMLVSALSGLETMRAAYQHAIDTEYRFYSYGDASLLFP 352
>gi|19746363|ref|NP_607499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS8232]
gi|306827089|ref|ZP_07460386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes ATCC 10782]
gi|24212183|sp|Q8P0D9|QUEA_STRP8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|19748559|gb|AAL97998.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS8232]
gi|304430723|gb|EFM33735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes ATCC 10782]
Length = 342
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKT---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+ID+ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKATIIDELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|323440807|gb|EGA98516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus O11]
gi|323442844|gb|EGB00469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus O46]
Length = 341
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDYDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|57650521|ref|YP_186534.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus COL]
gi|87162434|ref|YP_494291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88195451|ref|YP_500255.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151221754|ref|YP_001332576.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. Newman]
gi|161509866|ref|YP_001575525.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221141091|ref|ZP_03565584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258450534|ref|ZP_05698596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5948]
gi|262051290|ref|ZP_06023514.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
930918-3]
gi|282920189|ref|ZP_06327914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9765]
gi|284024696|ref|ZP_06379094.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 132]
gi|294848669|ref|ZP_06789415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9754]
gi|71153094|sp|Q5HFC3|QUEA_STAAC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|122539357|sp|Q2FXT5|QUEA_STAA8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123485522|sp|Q2FG87|QUEA_STAA3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|172048926|sp|A6QHI2|QUEA_STAAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038884|sp|A8Z2G8|QUEA_STAAT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57284707|gb|AAW36801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus COL]
gi|87128408|gb|ABD22922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87203009|gb|ABD30819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|150374554|dbj|BAF67814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. Newman]
gi|160368675|gb|ABX29646.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|257861692|gb|EEV84491.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5948]
gi|259160927|gb|EEW45947.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
930918-3]
gi|282594537|gb|EFB99522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9765]
gi|294824695|gb|EFG41118.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9754]
gi|302751468|gb|ADL65645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|315198659|gb|EFU28987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus CGS01]
gi|329314314|gb|AEB88727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus T0131]
gi|329728451|gb|EGG64888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 21189]
Length = 341
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|319786810|ref|YP_004146285.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pseudoxanthomonas suwonensis 11-1]
gi|317465322|gb|ADV27054.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pseudoxanthomonas suwonensis 11-1]
Length = 343
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 197/357 (55%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++R++VV P +D V DLP L D +V
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERSASRMLVVPPGEG---EFADMHVRDLPELLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V R SK + G +
Sbjct: 58 FNDTRVIPARLFGQKES-----GGRVEILIERLLPDAQARVQMRASKSPRPGSRIVLDGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +V LE+ ++ VG +PLPPYI R DA D Y
Sbjct: 113 GQAEVV-------GRDDAFFVVRFELDEPLEQWLARVGRLPLPPYIQ--RQPDAADAERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL RL G++ VTLHVGAGTF PV+VED +H M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDHALLQRLRERGVEFGHVTLHVGAGTFQPVRVEDVREHTM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + ++ GGR+++VGTT +R LE+A DG + P++G T IFI PG
Sbjct: 224 HSEWLNVGAELVAQIRRTRAAGGRVIAVGTTVVRALESAMR-DGQLQPFAGETRIFIFPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YR R+VD L++NFHLP+STLLMLVSAF G E Y+HA+ YRF+SYGD LL+
Sbjct: 283 YRIRSVDALVTNFHLPESTLLMLVSAFAGQERIFAAYRHAVEQRYRFFSYGDAMLLW 339
>gi|71903796|ref|YP_280599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS6180]
gi|94988817|ref|YP_596918.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS9429]
gi|94992703|ref|YP_600802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS2096]
gi|139473569|ref|YP_001128285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes str. Manfredo]
gi|91207330|sp|Q48SR6|QUEA_STRPM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218745|sp|Q1JB00|QUEA_STRPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218746|sp|Q1JL45|QUEA_STRPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218749|sp|A2RDX5|QUEA_STRPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71802891|gb|AAX72244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS6180]
gi|94542325|gb|ABF32374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS9429]
gi|94546211|gb|ABF36258.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS2096]
gi|134271816|emb|CAM30050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes str. Manfredo]
Length = 342
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKT---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+ID+ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKATIIDELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGGKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|118586983|ref|ZP_01544415.1| S-adenosylmethionine tRNA-ribosyltransferase [Oenococcus oeni ATCC
BAA-1163]
gi|118432605|gb|EAV39339.1| S-adenosylmethionine tRNA-ribosyltransferase [Oenococcus oeni ATCC
BAA-1163]
Length = 359
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 137/362 (37%), Positives = 205/362 (56%), Gaps = 19/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL++++ D D+ +LN DA+V N
Sbjct: 11 LSDFDYDLPHELIAQTPLKQRDTSRLLLLNAKTGA---YEDKHFYDIIDYLNPGDALVMN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++VI A+L+G R + + L + + W +P+K G ++ F + +
Sbjct: 68 NSRVIPARLHGWRP----ETKGHVEVLLLRQDHGDVWETLIKPAKKFPVGSVIDFGN-EN 122
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
++ + V+ + G + F GI + +G +PLPPYI K YQT
Sbjct: 123 ETIMTGKVVGELEHGGRYVEFQYDGI-FMELLDKLGEMPLPPYIKEKLKDQ----ERYQT 177
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+KI+GS AAPTAGLH+T LL ++ + GIK +TLHVG GTF PV+ E+ D H MHS
Sbjct: 178 VYSKIEGSAAAPTAGLHWTPELLDKVRAKGIKTIELTLHVGLGTFRPVEEENIDKHKMHS 237
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE------DGIINPWSGFTNIF 296
E + A +N V++ GGRIV+ GTT++R LET + G + SG+T+IF
Sbjct: 238 EFYQLSQAAADQINQVRNNGGRIVATGTTTIRTLETIGHKFNGDKYGGNVQADSGWTDIF 297
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+++ VD ++NFHLPKSTL+MLV+AF G E Y+HAI YRF+S+GD +
Sbjct: 298 IKPGFKWTTVDAFITNFHLPKSTLVMLVAAFTGRENILNAYKHAIQEKYRFFSFGDAMFI 357
Query: 357 FQ 358
+
Sbjct: 358 HK 359
>gi|313201955|ref|YP_004040613.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. MP688]
gi|312441271|gb|ADQ85377.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. MP688]
Length = 351
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 150/359 (41%), Positives = 210/359 (58%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LP IA P RD +RL+ + N I+DH +LP FLN+ D ++
Sbjct: 1 MRTEDFDFFLPEELIAQFPAAERDGSRLLRLDGNSGA---IADHQFRELPQFLNAGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + + + R S+ K G +
Sbjct: 58 FNDTRVIKARLQGHKES-----GGSIELLIERPLDTHRALAHIRASRSPKPGSRIFIGDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A VI++ ++ L+ L + G +PLPPYI DA D Y
Sbjct: 113 -----IPARVIER--QDDLFLIEVEHTTPLLDLLDQYGALPLPPYITHA--ADAEDDERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L RL + GI++ +VTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTVYARTPGAVAAPTAGLHFNQAMLDRLQTAGIQIAYVTLHVGAGTFQPVRVDDISEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI + T +N+ ++ G +I +VGTT+LR LE+A G + SG T+IFITPG
Sbjct: 224 HSEIYTVPPATVDLINTARAAGHKITAVGTTALRALESAARS-GALVAGSGETDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ V+ L++NFHLPKSTL+MLVSAF G+E + Y HAI+ YRF+SYGD LL ++
Sbjct: 283 YRFQVVERLLTNFHLPKSTLMMLVSAFAGVENIRAAYAHAIASRYRFFSYGDAMLLERR 341
>gi|119508835|ref|ZP_01627987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nodularia
spumigena CCY9414]
gi|119466364|gb|EAW47249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nodularia
spumigena CCY9414]
Length = 384
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 151/361 (41%), Positives = 201/361 (55%), Gaps = 18/361 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+++ LP IA PVFPRDS+RL+VV+ P + DLP L + D ++ N+T
Sbjct: 34 YNYTLPTELIAQNPVFPRDSSRLLVVNSPTTGTQTAPLHQIFRDLPELLRTGDLLIINDT 93
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A+L G + E+ L N W +P K K G + F + S
Sbjct: 94 KVIPARLYGRKS-----TGAEVEVLLLEERQYNCWLALVKPGKRFKPGTKIIFPPRGKDS 148
Query: 125 -----RLEATVID-KWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDY 177
L ATVID TG LL F + G L + G IPLPPYI D
Sbjct: 149 QPLPTELSATVIDTDPATGGRLLRFDVPEGKPLVEVLDQFGEIPLPPYITASTAAD---- 204
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ G++AAPTAGLHFT LL +L GI +TLHVG GTF PV++ED
Sbjct: 205 EQYQTVYAQQPGAIAAPTAGLHFTPELLKKLGDRGINQASITLHVGIGTFRPVEIEDVTS 264
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + T + + + K+ GGRI++VGTT++R LE A + G + + G T++FI
Sbjct: 265 HQMHEEWISVPPATVEQIRATKAAGGRIIAVGTTAVRALEGAA-KSGDLQTFCGKTDLFI 323
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R VD L++NFHLP+S+LLMLVSA G E +YQ AI+ YRFYS+GD L+
Sbjct: 324 YPGYEWRVVDGLITNFHLPRSSLLMLVSALIGRERLLSIYQEAIALKYRFYSFGDAMLIL 383
Query: 358 Q 358
+
Sbjct: 384 R 384
>gi|242242912|ref|ZP_04797357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis W23144]
gi|242233627|gb|EES35939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis W23144]
Length = 354
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 14 LNIEDFDYHLPESLIAQTPLKNRDQSRLLVLRKDTG---EMTHLHFRDVIHYFEPGDTLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 71 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 124 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 178 QTVYAKESGSAAAPTAGLHFTDDLLNKIEQKGVHIAFITLHVGLGTFRPVSVDNIDDHEM 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 238 HSEYYQMTQKTADLLNQTKENGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 297
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 298 FEFKAIDGLITNFHLPKSTLVMLVSAFSSKKYILNAYHKAVEMEYRFFSFGDAMLII 354
>gi|320106498|ref|YP_004182088.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Terriglobus
saanensis SP1PR4]
gi|319925019|gb|ADV82094.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Terriglobus
saanensis SP1PR4]
Length = 356
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 146/365 (40%), Positives = 208/365 (56%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLPP IA +P RD+AR++ V + + D DLP L D +V
Sbjct: 1 MRVSDFHFDLPPELIAQKPPVERDAARMLTVDRSTG---HLEDKNFLDLPDLLRKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE-----KEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NN++VI A+L R + +I L W +P + ++ G+ L
Sbjct: 58 LNNSRVIPARLFARRAGLRTQSSSPAPSGQIEVLLTQPFGGGRWRALVKPGRKVQVGERL 117
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G+ L+A V++ GE L F+ + + +G +PLPPYI R A
Sbjct: 118 VF----GEDELQAEVMETGEFGERTLRFA-PNPDFFATLERIGHMPLPPYI--HRADSAE 170
Query: 176 DYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT ++ ++ GS AAPTAGLHFT L+++ S G++V +TLHVG GTF P++VE
Sbjct: 171 DRSRYQTVFSDLELKGSAAAPTAGLHFTPETLNKIQSKGVQVQQITLHVGLGTFQPLRVE 230
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED--GIINPWSG 291
D + +H E + TA+A+N K+ G R+V+VGTT++R LE ++D + P SG
Sbjct: 231 DLSEIRLHEEPYTLPESTAEAINRAKAEGRRVVAVGTTTVRTLEHCASQDPGQPLAPHSG 290
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IF++PGY FR VD L++NFHLP+STLLMLVSAF G E+ Y+HA+ YRF+SYG
Sbjct: 291 TTSIFLSPGYEFRVVDALLTNFHLPQSTLLMLVSAFAGREQVLAAYRHAVESRYRFFSYG 350
Query: 352 DTSLL 356
D L
Sbjct: 351 DCMFL 355
>gi|209559631|ref|YP_002286103.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes NZ131]
gi|238058400|sp|B5XM46|QUEA_STRPZ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209540832|gb|ACI61408.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Streptococcus pyogenes NZ131]
Length = 342
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKT---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEK----TDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT+ID+ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGHLKATIIDELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|282919414|ref|ZP_06327149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C427]
gi|282317224|gb|EFB47598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C427]
Length = 341
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GNDKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|259418623|ref|ZP_05742540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter sp. TrichCH4B]
gi|259344845|gb|EEW56699.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter sp. TrichCH4B]
Length = 369
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 224/360 (62%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D V+DL +LN+ D +V
Sbjct: 21 MKLSDFDFDLPEDLIATRPAVPRSSARLLVAEQDR-----ITDARVTDLLQWLNAGDRLV 75
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R + I TL + WS +P K IK G+ + F
Sbjct: 76 LNDTRVIPARLSGQRHRTSAQGPVSARIEVTLLEPQADGCWSGLLKPLKKIKIGETVRFS 135
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++D G+ L F+++G + + ++ G +PLPPYIA KRP D +D
Sbjct: 136 DG-----LSAELVD-VVEGQGRLRFNLAGDDFDAALAEAGAMPLPPYIAAKRPADEQDKT 189
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G++ +VTLHVGAGTF+PVKVED H
Sbjct: 190 DYQTVWARSSGAVAAPTASLHFDEPLLAALAAKGVEFTYVTLHVGAGTFLPVKVEDVTSH 249
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ G R++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 250 KMHAEWGQVTAKAAAEIAATKAAGKRVIPVGTTALRLIESAARDSGAIAPWEGETDIFIY 309
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G E + +Y HA++ YRF+SYGD SLL
Sbjct: 310 PGFTFRVADALMTNFHLPKSTLMMLVSALMGQERMRSVYAHAVTERYRFFSYGDASLLIP 369
>gi|251811045|ref|ZP_04825518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis BCM-HMP0060]
gi|251805421|gb|EES58078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis BCM-HMP0060]
Length = 354
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 14 LNIEDFDYHLPESLIAQTPLKNRDQSRLLVLSKDTG---ELTHLHFRDVIYYFEPGDTLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 71 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 124 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH M
Sbjct: 178 QTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEM 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 238 HSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 297
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 298 FEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLII 354
>gi|237654063|ref|YP_002890377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thauera sp.
MZ1T]
gi|237625310|gb|ACR02000.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thauera sp.
MZ1T]
Length = 358
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 143/357 (40%), Positives = 202/357 (56%), Gaps = 15/357 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P+ R ++RL+V+ P ++D + S L +N D +VFN
Sbjct: 5 LADFDYTLPPELIAQAPLAERSASRLLVLEPQEGAAPRLTDAVFSALAERVNPGDLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L+GV+ ++ + V P+ R SK K G L
Sbjct: 65 DTRVIHARLHGVKDS-----GGQVEVLIERPVGPHEALAQVRASKSPKTGSRLRLADAFE 119
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L GE + +L + G +PLPPYI R D YQT
Sbjct: 120 VEVL-------GRVGEFFHLRFPPDEDLLALLERHGKLPLPPYIQ--RAAGEADESRYQT 170
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GSVAAPTAGLHF LL+R+ + G K ++TLHVGAGTF PV+V+D +H MH
Sbjct: 171 VYARAPGSVAAPTAGLHFDDALLARIAARGAKCAWLTLHVGAGTFQPVRVDDLGEHRMHR 230
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T A+ + ++ GGR+++VGTTS+R LE A E G + SG T IFI PG+R
Sbjct: 231 ERYVIPQETVDAIAATRAAGGRVIAVGTTSMRALEAAAQE-GALEAGSGETEIFILPGFR 289
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ VD L++NFHLP+STL+MLVSAF G++ ++ Y HA+ YRF+SYGD + ++
Sbjct: 290 FQVVDALVTNFHLPRSTLMMLVSAFAGMDSIRRAYAHAVEQRYRFFSYGDAMFITRR 346
>gi|51102975|gb|AAT96122.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + + RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRERGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|154250386|ref|YP_001411211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fervidobacterium nodosum Rt17-B1]
gi|154154322|gb|ABS61554.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Fervidobacterium nodosum Rt17-B1]
Length = 349
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 199/356 (55%), Gaps = 18/356 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP IA PV PRDS+RLMV++ I + D+ +++ D +VF
Sbjct: 12 NLEMYDYYLPEELIAQSPVEPRDSSRLMVLNKATG---EIQHRIFRDIGEYIHEGDLLVF 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N TKVI A+L G + I L ++ W +P K +K+G + F ++
Sbjct: 69 NTTKVIPARLFGKK-----TTGANIEILLLEKLGLGIWKCLVKPGKAVKEGTEIIF--EN 121
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++ + + G ++ FS E +I G +PLP YI YQ
Sbjct: 122 TNMKMYGKCLSRAEEGTRVIEFSEKEDE---KIFSFGNVPLPHYIKNHNV----KIERYQ 174
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK +GSVAAPTAGLHFT+ LL+ L + G+K V LHVG GTF PVKV D H MH
Sbjct: 175 TVYAKHEGSVAAPTAGLHFTTELLNELKNKGVKTAEVVLHVGIGTFKPVKVGDIRQHKMH 234
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + T A+N VK+ G R+++VGTT++R LET + +SG T+IFI P +
Sbjct: 235 EEYYIVSGETISAINEVKASGKRVIAVGTTTVRTLETIARLQKS-DSYSGKTDIFIYPPF 293
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKS+L+MLVSAF G + T + Y+ A+ YRF+S+GD +F
Sbjct: 294 EFKIVDALITNFHLPKSSLIMLVSAFAGYDLTMRAYRIAVQERYRFFSFGDAMFIF 349
>gi|325266040|ref|ZP_08132726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kingella
denitrificans ATCC 33394]
gi|324982678|gb|EGC18304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kingella
denitrificans ATCC 33394]
Length = 340
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 157/358 (43%), Positives = 209/358 (58%), Gaps = 19/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF LP IA P R S+RL+V N I D DLP ++ + D +V
Sbjct: 1 MHISEFDFHLPEHLIAQNPPAVRGSSRLLVAQHN----QPIEDRHFPDLPNYIATGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKA-----TGGKIEALIERVLDEHTALAHIRSSKSPKAGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L AT+ ++ GE+ + + + G +PLPPYI RP D D Y
Sbjct: 109 --EGSLHATMTER--VGELFKLQFHHRHNVYTLLEEYGALPLPPYI--VRPADDNDDARY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT +LS L G++ VTLHVGAGTF PV+V++ +H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTHEILSALQQKGVEFAEVTLHVGAGTFQPVRVDNIAEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T + + K+RG R+ SVGTTSLR +E+A G ++ G T+IFITPG
Sbjct: 223 HSEWFDVPEATVAKIQAAKARGNRVWSVGTTSLRAIESAARS-GSLHAGQGDTDIFITPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FR +D L++NFHLPKSTLLMLVSAF G E +++Y+HAI YRF+SYGD LL +
Sbjct: 282 YTFRVIDGLITNFHLPKSTLLMLVSAFAGSERIREIYRHAIEQEYRFFSYGDAMLLHR 339
>gi|17229290|ref|NP_485838.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nostoc sp.
PCC 7120]
gi|21263876|sp|Q8YW18|QUEA_ANASP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|17130888|dbj|BAB73497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nostoc sp.
PCC 7120]
Length = 397
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 151/372 (40%), Positives = 202/372 (54%), Gaps = 28/372 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNL-SCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+D+ LPP RIA P PRDS+RL+VV+ + DLP L D ++ NNT
Sbjct: 30 YDYVLPPERIAQNPAVPRDSSRLLVVNSQTTGKETPPLHQIFRDLPDILRPGDLLIMNNT 89
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A+L G + E+ L N W +P K KKG + F ++
Sbjct: 90 KVIPARLYGRKSS-----GAEVEILLLEERKFNCWLALVKPGKRFKKGTQIIFEGLGMRN 144
Query: 125 ---------------RLEATVID-KWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIA 167
+L ATV++ TG LL F + G L + + G IPLPPYI
Sbjct: 145 LGIENSPQYSVASPHQLTATVLETDKATGGRLLQFDLPEGQSLVQLLDKFGEIPLPPYIT 204
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
+ D YQT YA+ G++AAPTAGLHFT LL +L I F+TLHVG GTF
Sbjct: 205 TSQAAD----EQYQTVYAEEPGAIAAPTAGLHFTPELLQKLRDRNINQAFITLHVGVGTF 260
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
PV+VED H MH E + A T + + K+ GGRI++VGTT +R LE A G +
Sbjct: 261 RPVEVEDVATHQMHEEWIEVPAATVAQIKATKAAGGRIIAVGTTVVRALEGAAAS-GNLQ 319
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
+ G TN+FI PGY+++ V+ L++NFHLP+S+LLMLVSA G E +YQ AI+ YRF
Sbjct: 320 EFCGKTNLFIYPGYKWQVVEGLITNFHLPRSSLLMLVSALIGRERLLNIYQEAIASQYRF 379
Query: 348 YSYGDTSLLFQK 359
YS+GD L+ +
Sbjct: 380 YSFGDAMLILPE 391
>gi|290580879|ref|YP_003485271.1| putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans NN2025]
gi|254997778|dbj|BAH88379.1| putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans NN2025]
Length = 342
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP + IA P+ RDS++L+VV + D + LN DA+V
Sbjct: 1 MNTSDFDFNLPEALIAQTPLKKRDSSKLLVVDHQKKT---MKDTHFDHIIDELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----TVTHGHVELLLLKNIQGDQWEVLAKPAKRLKIGSHISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A + ++ N G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKAIIKEELNHGGRIVEFSYEGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LLS++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLSKIEAKGVKLVYLTLHVGLGTFRPVSVDNVEEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L +K+ GGRIV+VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYSLSPEAAQTLKDIKANGGRIVAVGTTSIRTLETIGNKFAGQIEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKIVDAFSTNFHLPKSTLVMLVSAFAGRDFILDAYKHAVDKHYRFFSFGDAMFV 341
>gi|227513119|ref|ZP_03943168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri ATCC 11577]
gi|227083694|gb|EEI19006.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri ATCC 11577]
Length = 352
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 142/355 (40%), Positives = 208/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++FD+ LP IA P+ RD +RL+V++ + D ++ +LN DA+V N
Sbjct: 13 LEDFDYKLPHELIAQTPIKDRDESRLLVLNKETGD---MQDRRFYNIIDYLNPGDALVMN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++KV+ A++ GV+ I L + N W +P+K K G ++ F G
Sbjct: 70 DSKVMPARIYGVK----KDTGAHIEVLLLHNIEGNRWETLMKPAKRAKVGTVIDF----G 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ +L+A V + + G + F GI + +G PLPPYI K YQT
Sbjct: 122 EGQLQAVVTKELDHGGREIEFKYEGI-FIEILERLGETPLPPYIKEKLDD----PNRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLH+T LL ++ G+ + ++TLHVG GTF PV+ ++ +DH MHS
Sbjct: 177 VYAKEMGSAAAPTAGLHWTKELLQKVADKGVHLVYLTLHVGLGTFRPVEEDNIEDHKMHS 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + ++ LN V+ GG+IV+ GTTS+R LET T+ +G I P SG+T+IFI PGY
Sbjct: 237 EFYRLSEEASKTLNDVRKNGGKIVATGTTSIRTLETVGTKFNGEIRPDSGWTDIFIKPGY 296
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++ VD ++NFHLPKSTL+MLV++F G E YQHAIS YRF+S+GD +
Sbjct: 297 QWQVVDSFITNFHLPKSTLVMLVASFTGRENILNAYQHAISEKYRFFSFGDAMYI 351
>gi|329116810|ref|ZP_08245527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parauberis NCFD 2020]
gi|326907215|gb|EGE54129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parauberis NCFD 2020]
Length = 342
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHKK---ETMVDSHFDHIIKELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + + L S + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEKP----DTKGHVELLLLKNTSGDQWEVLAKPAKRLRVGSQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSATVIEELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLEDS----ERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAATTLRQVKADGGRVIAVGTTSIRTLETIGSKFKGEIVADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F VD +NFHLPKSTL+MLVSAF G + + Y+HA++ YRF+S+GD +
Sbjct: 285 GYQFTIVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAVNEKYRFFSFGDAMFV 341
>gi|187930024|ref|YP_001900511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
pickettii 12J]
gi|238691819|sp|B2UC74|QUEA_RALPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187726914|gb|ACD28079.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ralstonia
pickettii 12J]
Length = 359
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 207/356 (58%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V + D +DL +L D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPDRTASRLLAVRR-TEDAVHFEDRQFADLVDYLRPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+ G + ++ + + ++ R SK +G L
Sbjct: 63 DTRVIKARFFGHKAS-----GGKVEVLVERLLDEHTVLAQIRSSKSPVEGTSLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L F ++L I G +PLPPYI D+ D YQT
Sbjct: 118 ------VTVGPRAEPFFTLRFPQPALDL---IEQYGRLPLPPYIEHD--PDSFDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L ++L ++GI+ F+TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYARNPGAVAAPTAGLHFDDALFAKLDAMGIRRGFLTLHVGAGTFQPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+ + ++ GGR+++VGTTS+R LE+A DG +N SG T+IFITPGYR
Sbjct: 227 EWYEITPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLNACSGETDIFITPGYR 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FRAVD+L++NFHLPKSTLLMLVSAF G+ ++ YQHAI+ YRF+SYGD LL +
Sbjct: 287 FRAVDLLVTNFHLPKSTLLMLVSAFAGMSAIREAYQHAIAQRYRFFSYGDAMLLTR 342
>gi|126668566|ref|ZP_01739520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter sp. ELB17]
gi|126626971|gb|EAZ97614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter sp. ELB17]
Length = 369
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 198/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL + ++ +DLP L D +V
Sbjct: 1 MNVSDFRFDLPDELIARYPLSERSASRLFCLDGLSGD---MNHRRFTDLPDLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + + + + R SK K G +
Sbjct: 58 FNNTKVIPARLFGKKE-----TGGSVEILVERITGDQQMLAHVRASKSPKPGQQVLLEDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + + + L + +G +PLPPYI R +A D Y
Sbjct: 113 TALNVI-------ARADALFELQADGSESLLDILDRLGHMPLPPYI--DRADEASDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL +L ++G+ FVTLHVGAGTF PV+V+ +DH+M
Sbjct: 164 QTVYAREAGAVAAPTAGLHFDEALLQKLAAMGVDSTFVTLHVGAGTFQPVRVDKLEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E+ + T A+ ++RGGR+++VGTTS+R LE+A+ G + P++G T+IFI PG
Sbjct: 224 HHELVHVRQDTVDAVARTRARGGRVIAVGTTSVRSLESASRH-GALRPFTGDTDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+AVD L++NFHLP+STL+MLVSAF G E Y+ A+ YRF+SYGD + +
Sbjct: 283 YSFQAVDALITNFHLPESTLIMLVSAFAGYENVMGAYKEAVREGYRFFSYGDAMFITGQ 341
>gi|149914724|ref|ZP_01903254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. AzwK-3b]
gi|149811517|gb|EDM71352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. AzwK-3b]
Length = 350
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 223/360 (61%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I D +V DL FL D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPARPRSSARLLVAQGD-----AIRDAIVRDLGDFLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T VI A+L+G+R + +I TL WS +P K ++ G+++ F
Sbjct: 56 LNDTAVIPARLSGMRRREGPEGVTQAKIEVTLLEPGPEGDWSALVKPLKKVRDGEVIVFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ LEA V+ + G+ LL F++ G + ++ G +PLPPYIA +R DA+D
Sbjct: 116 AG-----LEAEVLAR-REGQGLLRFNLEGEAFDTALNDAGAMPLPPYIAARRAADAQDRT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTA LHF + LL RL ++G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARHKGAVAAPTASLHFDAELLERLEAMGVTFSHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI
Sbjct: 230 RMHAEWGRVSEAAAAEIAATKAAGGRVIPVGTTALRLIESAAQASGAIAPWEGETDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G + K +Y HA+ + YRF+SYGD SLL
Sbjct: 290 PGFTFRVADALMTNFHLPKSTLMMLVSALMGQDRIKDIYDHAVENRYRFFSYGDASLLIP 349
>gi|21910602|ref|NP_664870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS315]
gi|25091088|sp|Q8K6Z3|QUEA_STRP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21904803|gb|AAM79673.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS315]
Length = 342
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKT---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT+ID+ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGHLKATIIDELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|260776672|ref|ZP_05885567.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607895|gb|EEX34160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 350
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 200/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N +SD +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQLDGNSG---ELSDGTFTDVLEQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERVLDEKSILAHVRCSKSPKPGSTILIGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D S D + + + + +G +PLPPYI RP + D Y
Sbjct: 113 DEYSAQMVARHDALFE-----LKFNAEKNVLAVLEEIGHMPLPPYI--DRPDEDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKVE+ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDEALLEKIKAKGAEFAYVTLHVGAGTFQPVKVENINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+R R+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINAAKARNSRVIAVGTTSVRSLESAAQDALKKGTALAPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|300703083|ref|YP_003744685.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum CFBP2957]
gi|299070746|emb|CBJ42041.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum CFBP2957]
Length = 356
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 201/356 (56%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V D +DL +L D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPDRTASRLLAVRRETQGT-HFDDRRFADLIDYLRPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+ G + I + + ++ R SK G L +
Sbjct: 63 DTRVIKARFFGHKAS-----GGRIEVLVERLLDEHTVLAQIRSSKSPVAGSRLRLANAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L F +EL I G +PLPPYI D+ D YQT
Sbjct: 118 ------VTVGPRQEPFFTLRFPQPALEL---IEQYGRLPLPPYIEHT--PDSFDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+ + ++ GGR+++VGTTS+R LE+A DG + SG T+IFITPGYR
Sbjct: 227 EWYAISPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLAAGSGETDIFITPGYR 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 287 FRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTR 342
>gi|159043729|ref|YP_001532523.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dinoroseobacter shibae DFL 12]
gi|189038520|sp|A8LI68|QUEA_DINSH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157911489|gb|ABV92922.1| queuosine biosynthesis protein [Dinoroseobacter shibae DFL 12]
Length = 353
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 164/362 (45%), Positives = 219/362 (60%), Gaps = 13/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V D V+DL L D +V
Sbjct: 1 MHLSDFDFDLPETLIATRPARPRSSARLLVAE----ARGPFRDRRVTDLVDELQPGDRLV 56
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NNTKVI A+L G R ++ TL S W+ A+P + + +G+ + F
Sbjct: 57 LNNTKVIPARLFGTRHRDSAQGPVSAKVEITLLEPASEG-WTALAKPLRKLAEGEEIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L ATV ++ L+ F+ +G + + ++ G +PLPPYIA KR DA+D
Sbjct: 116 D-----ALRATVAERGADRVRLV-FNCTGDDFDAALAQAGAMPLPPYIAAKRAADAQDRD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A +G+VAAPTA LHF LL+ L + G++ FVTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVFAARKGAVAAPTASLHFDEALLAALRARGVEFSFVTLHVGAGTFLPVKVDDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G I A + + ++ G R++ VGTT+LRL+ETA + G PW G T+IFI
Sbjct: 230 KMHSEWGEISDQAAAEILATRADGRRVIPVGTTALRLIETAAAQPGGFGPWEGDTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G E +++Y HAI+ YRF+SYGD+SLL
Sbjct: 290 PGFEFRITDGLMTNFHLPKSTLMMLVSALMGAERIREIYAHAIAQEYRFFSYGDSSLLLP 349
Query: 359 KR 360
R
Sbjct: 350 DR 351
>gi|194097646|ref|YP_002000684.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae NCCP11945]
gi|291044646|ref|ZP_06570355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI2]
gi|193932936|gb|ACF28760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae NCCP11945]
gi|291011540|gb|EFE03536.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI2]
gi|317163467|gb|ADV07008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 356
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGR 350
>gi|325139519|gb|EGC62059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis CU385]
Length = 356
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 153/358 (42%), Positives = 208/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 119 --EGGIRAVTVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYIE--RAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVLGR 350
>gi|94990719|ref|YP_598819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10270]
gi|166218747|sp|Q1JG69|QUEA_STRPD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|94544227|gb|ABF34275.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10270]
Length = 342
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKT---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT+ID+ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GNGHLKATIIDELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|229824011|ref|ZP_04450080.1| hypothetical protein GCWU000282_01315 [Catonella morbi ATCC 51271]
gi|229786365|gb|EEP22479.1| hypothetical protein GCWU000282_01315 [Catonella morbi ATCC 51271]
Length = 344
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
K+FD+ LP IA P+ R ++RL+V+ D + FLN DA+V N
Sbjct: 4 TKDFDYHLPEHLIAQTPLADRAASRLLVLDRQTGRK---QDLHFDQIINFLNPGDALVVN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
T+VI A+L G++ + L N W +P++ K G + F
Sbjct: 61 ETRVIPARLFGIKP----ETGGHLEVLLLNNTQGNQWECLIKPARRAKTGTQIVFGE--- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL ATV+ + + G ++ FS G+ + +G +PLPPYI + YQT
Sbjct: 114 DGRLTATVVSEGDHGGRIIEFSYEGV-FLEILESLGQMPLPPYIKERLED----ADRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL + + G+++ + LHVG GTF PV + +DH MH+
Sbjct: 169 VYAKENGSAAAPTAGLHFTDELLEAIKAKGVEIIPLVLHVGLGTFRPVSADSIEDHEMHA 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGY 301
E + +A A+ +V++RGG+I +VGTTS+R LET A DG + SG+T IFI+PG+
Sbjct: 229 EYYQLSQESADAIQAVQARGGKIFAVGTTSVRTLETIAAKFDGQVRADSGWTQIFISPGF 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLP STL+MLVSAF E Y+HA+ YRF+S+GD+ L+
Sbjct: 289 EFKVVDHLITNFHLPCSTLVMLVSAFYNREAVLAAYEHAVEAEYRFFSFGDSMLIL 344
>gi|56461306|ref|YP_156587.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
loihiensis L2TR]
gi|81599980|sp|Q5QVL1|QUEA_IDILO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56180316|gb|AAV83038.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
loihiensis L2TR]
Length = 351
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 201/360 (55%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +F F+LP IA P R ++RL+ V + I ++ +N+ D +V
Sbjct: 9 LKVSDFSFELPDELIARYPQEQRSASRLLSV---KANENSIEHKHFKNIVDEINAGDLLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + + R ++ K G L
Sbjct: 66 FNDTRVIPARLLGEKVS-----GGKVEVLVERLLDDHRVLAHVRANRAPKAGAELLL--- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++ T++ + + + + + G +PLPPYI RP ++ D Y
Sbjct: 118 --EGHVKITMLAR--HDALFELKFEHDETVLELLEQYGHMPLPPYI--DRPDESSDKERY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L +L G+ +VTLHVGAGTF PV+VED +DH+M
Sbjct: 172 QTVYNREPGAVAAPTAGLHFDDEILQQLRDKGVNSAYVTLHVGAGTFQPVRVEDINDHVM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A T A+ K+ GGR+++VGTTS+R LE+A + + I P+ TNIFI
Sbjct: 232 HSEYAKVSAETCNAIKQTKASGGRVIAVGTTSVRSLESAAQASTNESIEPFFDDTNIFIY 291
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ VD +++NFHLP+STL+MLVSAF G + K Y AI YRF+SYGD LL +
Sbjct: 292 PGYEFKVVDSMITNFHLPESTLIMLVSAFVGRDLIMKAYNEAIKERYRFFSYGDAMLLQR 351
>gi|222151525|ref|YP_002560681.1| S-adenosylmethionine tRNA ribosyltransferase [Macrococcus
caseolyticus JCSC5402]
gi|254764282|sp|B9E717|QUEA_MACCJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|222120650|dbj|BAH17985.1| S-adenosylmethionine tRNA ribosyltransferase [Macrococcus
caseolyticus JCSC5402]
Length = 340
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFDF+LP S IA P+ R ++RL+ ++ + I + +LN+ D +V
Sbjct: 1 MDVNEFDFNLPESLIAQTPLQDRTASRLLTLNKHTG---EIKHTNFKSIIDYLNTGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ +I L + N W V +P+K + G + F
Sbjct: 58 LNDTKVMPARLFGVK----EDTGAKIE-MLMLTEHDNGWEVLIKPAKRVTIGTRISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A +++ + G ++ + GI L+ ++ +G +PLPPYI + Y
Sbjct: 110 -GEGKIVAICVEELDQGGRIMQLNYEGI-LQERLDELGLMPLPPYIKETLEDQS----RY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT +LL + + GI + ++TLHVG GTF PV V+D + H M
Sbjct: 164 QTVYARATGSAAAPTAGLHFTESLLEDIKAKGINIAYITLHVGLGTFRPVSVDDVESHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ LN + G RI++VGTTS R LET + G SG+T+IFI PG
Sbjct: 224 HSEYYEMSEETAKLLNDTRDSGNRIITVGTTSTRTLETIADDSGHFTAQSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+AVD +++NFHLPKSTL+MLVS+ E Y A++ YRF+S+GD ++
Sbjct: 284 YSFKAVDAMITNFHLPKSTLVMLVSSLATKEFIMNAYNEAVNEKYRFFSFGDAMFIY 340
>gi|323127653|gb|ADX24950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 342
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHEQKT---MIDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ F+ GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFNYEGI-FLEVLESLGEMPLPPYIHEKLDD----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT+NLLS++ + G+ + ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTNLLSKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKKAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGDAMFV 341
>gi|330998873|ref|ZP_08322600.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parasutterella excrementihominis YIT 11859]
gi|329576087|gb|EGG57606.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parasutterella excrementihominis YIT 11859]
Length = 354
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 149/360 (41%), Positives = 199/360 (55%), Gaps = 17/360 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LP S IA P+ R ++RL+ V P+ S + D D+ L D +VF
Sbjct: 7 HLSDFDFELPESLIAQYPLKDRAASRLLHVKPDGS----VEDLHFRDILNLLKPGDLLVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+LNG + R SK K G IL+F +
Sbjct: 63 NNTKVIKARLNGKKE-----TGGVFEAMTERVTGTYEAISMMRASKAAKPGTILYFDHPE 117
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ A V+ + L F +E+ G +PLPPYI + D YQ
Sbjct: 118 GKEPARAEVLGREGEF-FRLKFDHPVLEVL---DEYGKVPLPPYIQHA--AEKSDESRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK G+VAAPTAGLHFT LL ++ G + FVTLHVGAGTF PV+VE+ +H+MH
Sbjct: 172 TVYAKYPGAVAAPTAGLHFTDELLQQIRDKGCEEVFVTLHVGAGTFQPVRVENLSEHVMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED--GIINPWSGFTNIFITP 299
SE I A+ +N K+ G R+V VGTTSLR +E + +++ G + S T +FI P
Sbjct: 232 SEWYSISPEAAEKINKAKAEGRRVVCVGTTSLRTVEASASQNPEGKVRAESADTRLFIKP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ D +++NFHLPKSTL+MLVSA CG +E Y+HA+ YRF+SYGD L QK
Sbjct: 292 GYEFKVCDAMVTNFHLPKSTLVMLVSALCGRDEILAAYKHAVDEKYRFFSYGDACFLEQK 351
>gi|167646153|ref|YP_001683816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
sp. K31]
gi|189038513|sp|B0T8H5|QUEA_CAUSK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167348583|gb|ABZ71318.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Caulobacter sp. K31]
Length = 373
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 199/366 (54%), Positives = 246/366 (67%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP + IALRP PRDSARL+VV P + D +V DLP FL DA+V
Sbjct: 1 MRLSDFDFHLPDAAIALRPAEPRDSARLLVVRPGEG----LEDRIVRDLPDFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L G R + TLH R++P+ W + RP K +K+GD +
Sbjct: 57 FNDTRVIPARLMGRRAGRETGGGDGSPVAVEATLHRRIAPDRWVAFMRPGKRLKEGDRIA 116
Query: 117 FFSQD----GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F L+ATVI K GEI L F +G++L+ ++ G +PLPPYIA KR
Sbjct: 117 FGHDQDRACQAGMLDATVIAKHEGGEIELAFDFAGVDLDLAVAAHGEMPLPPYIAAKRAE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFTS+LL RL + G+ ++FVTLHVGAGTF+PVK
Sbjct: 177 DDRDRADYQTVYAREDGSVAAPTAGLHFTSDLLERLKAGGVSLHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+ DH MH+E G + A A ALN+ ++ GGRIV VGTTSLRLLE+AT ED II P++
Sbjct: 237 DVVADHKMHAEFGEVPAAVADALNAARAAGGRIVCVGTTSLRLLESATGEDRIIKPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFRA D+LM+NFHLPKSTL MLVSAF G K Y+HAI+ YRFYSYGD
Sbjct: 297 TAIFITPGYRFRAADVLMTNFHLPKSTLFMLVSAFAGQATMKAAYEHAIAAGYRFYSYGD 356
Query: 353 TSLLFQ 358
SLLF+
Sbjct: 357 GSLLFR 362
>gi|323341474|ref|ZP_08081715.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus ruminis ATCC 25644]
gi|323091085|gb|EFZ33716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus ruminis ATCC 25644]
Length = 350
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 207/356 (58%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FD+DLP IA P+ RD +RL+V+ D ++ LN DA+V N
Sbjct: 11 TEDFDYDLPQELIAQTPLKERDQSRLLVLDSKTG---KYQDDYFYNVIDRLNPGDALVMN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+++V+ A+L GV+ + L ++W +P+K K G + F G
Sbjct: 68 DSRVMPARLYGVKP----ETGGHVEVLLLNNTDGDNWETLVKPAKRAKVGTEISF----G 119
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L ATV ++ G ++ F GI + +G +PLPPYI K YQT
Sbjct: 120 DGKLTATVTEELEHGGRMIEFHYDGI-FMEILDQLGEMPLPPYIKEKLDD----PEMYQT 174
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y++ GS AAPTAGLHFT+ LL ++ G+K+ ++TLHVG GTF PV E+ +DH MHS
Sbjct: 175 VYSREIGSAAAPTAGLHFTTELLKKIEDKGVKLVYLTLHVGLGTFRPVSEENIEDHKMHS 234
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN VK+ GGRIV+ GTTS+R LET T+ +G I SG+T+IFI PGY
Sbjct: 235 EFYRLTEDAAKTLNEVKANGGRIVATGTTSIRTLETIGTKFNGEIRADSGWTDIFIKPGY 294
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ VD ++NFHLPKSTL+MLV++F G E Y+HA+S YRF+S+GD ++
Sbjct: 295 KWQVVDAFITNFHLPKSTLVMLVASFTGRENILNAYRHAVSEKYRFFSFGDAMFIY 350
>gi|212709159|ref|ZP_03317287.1| hypothetical protein PROVALCAL_00192 [Providencia alcalifaciens DSM
30120]
gi|212688071|gb|EEB47599.1| hypothetical protein PROVALCAL_00192 [Providencia alcalifaciens DSM
30120]
Length = 360
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 205/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ + ++ + +D+ L D +V
Sbjct: 1 MRVSDFTFELPEELIAHYPQAERSSCRLLGLDGATG---QLTHGVFTDILEKLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLIERMLDEHRVLAHVRASKAPKEGAALLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + G + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---VNATMVAR--HGALFELRFDDARDVLSILNQIGHMPLPPYI--DRPDEESDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLDALRQKGVEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A +++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKASQNALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T + Y+ A+ YRF+SYGD +
Sbjct: 286 PGYEYQVIDALITNFHLPESTLIMLVSAFAGYQNTMRAYKEAVEQKYRFFSYGDAMFITP 345
>gi|209527446|ref|ZP_03275951.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Arthrospira
maxima CS-328]
gi|209492119|gb|EDZ92469.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Arthrospira
maxima CS-328]
Length = 375
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 158/366 (43%), Positives = 201/366 (54%), Gaps = 26/366 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ NNT+
Sbjct: 18 YDYELPPDRIAQNPVIPRDSSRLLVVD----SPPSHQHRLFRDLPDLLQPEDLLILNNTR 73
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L G + I L +PN W +P K K GD L F S+ G+
Sbjct: 74 VLPARLYGRKS-----TSAAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFPSKSGREI 128
Query: 126 LEATVID-KWNTGEILLVFS-ISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L ATVID TG LL F G L + G IP PPY+ + + YQT
Sbjct: 129 LYATVIDTNPGTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVTDSQAV----AEQYQTI 184
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
Y G+VAAPTAGLHFT L RL I F+TLHVG GTF PV+VED H MH+E
Sbjct: 185 YGTRPGAVAAPTAGLHFTEELFQRLSDHHIDHAFLTLHVGLGTFRPVEVEDITTHQMHAE 244
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFITP 299
+ T +N ++RGGRI++VGTT +R LE DG I P+ G N+FI P
Sbjct: 245 WVELRPETVDKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSLDGCIQPYCGEINLFIYP 304
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-------HAYRFYSYGD 352
GYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ + YRFYS+GD
Sbjct: 305 GYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYSFGD 364
Query: 353 TSLLFQ 358
L+
Sbjct: 365 AMLILP 370
>gi|24374633|ref|NP_718676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
oneidensis MR-1]
gi|46577064|sp|Q8ECM2|QUEA_SHEON RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|24349260|gb|AAN56120.1|AE015748_8 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
oneidensis MR-1]
Length = 345
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 144/360 (40%), Positives = 201/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LVDKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG ++ LL S + + + VG +PLPPYI RP + D Y
Sbjct: 110 DGGYEMKMMARHDALFELQLL----SELSILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLEALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G +N +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIARTKAAGNRVVAVGTTSVRSLESAARASAGQLNAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G E YQHAI YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGYEHVMAAYQHAIKQKYRFFSYGDAMFVTKK 343
>gi|119478666|ref|ZP_01618556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [marine gamma proteobacterium
HTCC2143]
gi|119448392|gb|EAW29644.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [marine gamma proteobacterium
HTCC2143]
Length = 349
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 194/360 (53%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+F LP IA P R +RL+V+ I +DL LN D +V
Sbjct: 1 MQLSDFNFQLPNHLIARYPTTNRTDSRLLVLDGQSGD---IQHQQFNDLSELLNDGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + + R SK K G +LH
Sbjct: 58 FNDTRVIPARLWGKKS-----TGGRIEILVERIIDSQRVLAHIRSSKSPKAGAVLHLHQN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV + + E ++ +G +PLPPYI R + D Y
Sbjct: 113 ANSDETMATVTVVGRHDALFELMFDGEKEALSVLNSIGHMPLPPYI--DRSDELADRERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF+ + + G+ FVTLHVGAGTF PV+V + +H M
Sbjct: 171 QTVYGKKDGAVAAPTAGLHFSEQFIQHCQNKGVDTAFVTLHVGAGTFQPVRVSNITEHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + + + RGGR+++VGTTS+R LETA+ G + P+SG + IFI PG
Sbjct: 231 HAEWLEVSEQVCEKVRLTRQRGGRVIAVGTTSVRSLETAS-HSGELQPFSGDSEIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F++VD +++NFHLP+STL+MLVSAF E + Y+ A+ H YRF+SYGD + +R
Sbjct: 290 YQFKSVDAMLTNFHLPESTLIMLVSAFANREHVLEAYRTAVEHNYRFFSYGDAMFVLPQR 349
>gi|227510191|ref|ZP_03940240.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
gi|227190396|gb|EEI70463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
Length = 352
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 141/355 (39%), Positives = 208/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++FD+ LP IA P+ RD +RL+V++ + D ++ +LN DA+V N
Sbjct: 13 LEDFDYKLPHELIAQTPIKDRDESRLLVLNKETGD---MQDRRFYNIIDYLNPGDALVMN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++KV+ A++ GV+ I L + + W +P+K K G ++ F G
Sbjct: 70 DSKVMPARIYGVK----KDTGAHIEVLLLHNIDGDRWETLMKPAKRAKVGTVIDF----G 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ +L+A V + + G + F GI + +G PLPPYI K YQT
Sbjct: 122 EGQLQAVVTKELDHGGREIEFKYEGI-FIEILERLGETPLPPYIKEKLDD----PNRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLH+T LL ++ G+ + ++TLHVG GTF PV+ ++ +DH MHS
Sbjct: 177 VYAKEMGSAAAPTAGLHWTKELLQKVADKGVHLVYLTLHVGLGTFRPVEEDNIEDHKMHS 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + ++ LN V+ GG+IV+ GTTS+R LET T+ +G I P SG+T+IFI PGY
Sbjct: 237 EFYRLSEEASKTLNDVRKNGGKIVATGTTSIRTLETVGTKFNGEIRPDSGWTDIFIKPGY 296
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++ VD ++NFHLPKSTL+MLV++F G E YQHAIS YRF+S+GD +
Sbjct: 297 QWQVVDSFITNFHLPKSTLVMLVASFTGRENILNAYQHAISEKYRFFSFGDAMYI 351
>gi|227524334|ref|ZP_03954383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus hilgardii ATCC 8290]
gi|227088565|gb|EEI23877.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus hilgardii ATCC 8290]
Length = 352
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 141/355 (39%), Positives = 208/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++FD+ LP IA P+ RD +RL+V++ + D ++ +LN DA+V N
Sbjct: 13 LEDFDYKLPHELIAQTPIKDRDESRLLVLNKETGD---MQDRRFYNIIDYLNPGDALVMN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++KV+ A++ GV+ I L + + W +P+K K G ++ F G
Sbjct: 70 DSKVMPARIYGVK----KDTGAHIEVLLLHNIEGDRWETLMKPAKRAKVGTVIGF----G 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ +L+A V + + G + F GI + +G PLPPYI K YQT
Sbjct: 122 EGQLQAVVTKELDHGGREIEFKYEGI-FIEILERLGETPLPPYIKEKLDD----PNRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLH+T LL ++ G+ + ++TLHVG GTF PV+ ++ +DH MHS
Sbjct: 177 VYAKEMGSAAAPTAGLHWTKELLQKVADKGVHLVYLTLHVGLGTFRPVEEDNIEDHKMHS 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + ++ LN V+ GG+IV+ GTTS+R LET T+ +G I P SG+T+IFI PGY
Sbjct: 237 EFYRLSEEASKTLNDVRKNGGKIVATGTTSIRTLETVGTKFNGEIRPDSGWTDIFIKPGY 296
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++ VD ++NFHLPKSTL+MLV++F G E YQHAIS YRF+S+GD +
Sbjct: 297 QWQVVDSFITNFHLPKSTLVMLVASFTGRENILNAYQHAISEKYRFFSFGDAMYI 351
>gi|172058105|ref|YP_001814565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Exiguobacterium sibiricum 255-15]
gi|229598027|sp|B1YJR0|QUEA_EXIS2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|171990626|gb|ACB61548.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Exiguobacterium sibiricum 255-15]
Length = 347
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP +IA P+ R S++LMVV+ + D+ ++ N+ D +V
Sbjct: 1 MDVNLFDFHLPEEQIAQVPLLDRTSSKLMVVNRETGA---LRHEKFHDIVSYFNAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ +I L + S + W A+P+K +K G +L F
Sbjct: 58 INDTKVLPARLFGVK----EETGGKIELLLLKQTSDDVWETLAKPAKRVKPGTVLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++ + G +L FS +GI + +GT+PLPPYI + Y
Sbjct: 111 -GDGLLRAECVEALDDGGRILKFSYTGI-FYEVLDQLGTMPLPPYIHEQLEDQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL L G+++ +TLHVG GTF PV V+D D H M
Sbjct: 165 QTVYARERGSAAAPTAGLHFTPELLQALTDKGVQLAPLTLHVGLGTFRPVSVDDVDSHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A+ L + GGRI++VGTTS R LET + G SG+T+IFI PG
Sbjct: 225 HSEYYELPESSAKILRETRKNGGRIIAVGTTSTRTLETVIRDHGDFVEASGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ +D L++NFHLPKSTL+MLVSA E Y+ A++ YRF+S+GD L ++
Sbjct: 285 QEIKGIDGLITNFHLPKSTLIMLVSALSTREHILHAYEEAVAQNYRFFSFGDAMFLTRE 343
>gi|300023678|ref|YP_003756289.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525499|gb|ADJ23968.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Hyphomicrobium denitrificans ATCC 51888]
Length = 370
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 199/365 (54%), Positives = 241/365 (66%), Gaps = 9/365 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLS----CPLVISDHLVSDLPAFLNSN 56
M FDF+LP S IALRP PRDSARL+VVHP +SD V DLP LN
Sbjct: 1 MRTDLFDFELPDSAIALRPAEPRDSARLLVVHPVKGGCARDDAELSDKTVRDLPGLLNPG 60
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
DA+VFN+T+VI A L+GVR + ++ L +V +SW +ARP+K ++ GD +H
Sbjct: 61 DALVFNDTRVIPAALSGVRTRG--DVQAKVDFNLTKQVGDSSWRAFARPAKRLEVGDRVH 118
Query: 117 FFSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
F L+ATV K GE+ L F SG L+ I VG +PLPPYIA KR D
Sbjct: 119 FGHSGESCFLGALDATVSAKGEAGEVELAFDYSGSILDDAIRAVGVMPLPPYIALKRGAD 178
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD YQT YAK G+VAAPTAGLHFT L + L + GI +FVTLHVG GTF+PVK +
Sbjct: 179 DRDRQSYQTVYAKNDGAVAAPTAGLHFTPELFAALDARGISRHFVTLHVGPGTFLPVKAD 238
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT +H MHSE G I A TA ALN ++RGGRIV+VGTTSLR+LE+A +DG I WSG T
Sbjct: 239 DTSEHKMHSEWGEISAETAAALNETRARGGRIVAVGTTSLRVLESAAGDDGSIPAWSGDT 298
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPGYRF+A+D LM+NFHLP+STL MLV+AF G+ + Y HAI YRFYSYGD
Sbjct: 299 SIFITPGYRFKAIDALMTNFHLPRSTLFMLVAAFSGLGTMRAAYGHAIHSGYRFYSYGDA 358
Query: 354 SLLFQ 358
SLLF
Sbjct: 359 SLLFP 363
>gi|56963322|ref|YP_175053.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
clausii KSM-K16]
gi|81600944|sp|Q5WHR3|QUEA_BACSK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56909565|dbj|BAD64092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
clausii KSM-K16]
Length = 342
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 198/358 (55%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFDFDLP IA P+ R ++RL+VV ISD + DL L+ D +V
Sbjct: 1 MDVNEFDFDLPEELIAQTPLKTRTNSRLLVVDKKTKA---ISDRMFPDLIEALSPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + + I L ++ + W +P+K +K G + F
Sbjct: 58 LNDTKVMPARLLGEKV----ETKAVIELLLLKQLEGDCWETLVKPAKRVKIGTEVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A G + F SG+ + +GT+PLPPYI + Y
Sbjct: 111 -GDGKLTAICTAVQPQGGRIFEFRYSGV-FYELLEELGTMPLPPYIKERLED----ADRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHF+ LL + + G+K+ ++TLHVG GTF PV +DH M
Sbjct: 165 QTVYAKQIGSAAAPTAGLHFSEQLLLEIEAKGVKIVYITLHVGLGTFRPVSASSVEDHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A L S + GG I++VGTTS R LET ++ G SG+T+IFI PG
Sbjct: 225 HAEYYQVTEEAAHTLASARENGGNIIAVGTTSARTLETIYSDHGAFVAASGWTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+++A+D L++NFHLPKSTL+MLVSA G E Y HAI YRF+S+GD +
Sbjct: 285 YKYQAIDGLLTNFHLPKSTLVMLVSALIGKEALMDAYAHAIKERYRFFSFGDAMFIRP 342
>gi|257126618|ref|YP_003164732.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia buccalis C-1013-b]
gi|257050557|gb|ACV39741.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Leptotrichia buccalis C-1013-b]
Length = 340
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA V PRD ++L+V++ + + ++ +L +D +V
Sbjct: 1 MNISDFDFELPEELIAQHAVEPRDHSKLLVLNKDKKT---LEHKKFYNIIDYLKKDDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + + C L R +W V +P+K +K G L F
Sbjct: 58 INRTKVIPARLFGHKE-----NGVVLECFLLKRYDLYTWEVLLKPAKKLKIGQKLIFSD- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A +++ G ++ F+ G E + +G +PLPPYI K Y
Sbjct: 112 ---GILKAELLEIKEDGNRIIKFNFEGR-FEEILDKLGEMPLPPYIMEKLED----KNRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT+ LL ++ GI + V L VG GTF PV+VE+ DH M
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTNELLEKIREKGITIAEVFLDVGLGTFRPVQVENVLDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA+ +N K +G R+++VGTTS+R LE++ E+G + G TNIFI
Sbjct: 224 HSEKYRIPEETAKIINEAKKKGNRVIAVGTTSVRTLESSVDENGKLKASEGNTNIFIYGD 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D +++NFHLPKSTL+ML+SAF G E + Y+ A+ YRFYS+GD+ ++
Sbjct: 284 YKFKIIDAIITNFHLPKSTLIMLISAFGGKEFIFEAYKKAVEEKYRFYSFGDSMFIY 340
>gi|331701282|ref|YP_004398241.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri NRRL B-30929]
gi|329128625|gb|AEB73178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri NRRL B-30929]
Length = 346
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 207/361 (57%), Gaps = 21/361 (5%)
Query: 1 MM----VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +++FD+DLP IA P+ RD +RL+V+ + D ++ +LN
Sbjct: 1 MKTNYTLEDFDYDLPHELIAQTPIKDRDESRLLVLDKESG---EMQDRHFYNIIDYLNPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
DA+V N++KV+ A++ GV+ + L + + W +P+K K G +++
Sbjct: 58 DALVMNDSKVMPARIYGVK----ADTGGHMEVLLLHNIEGDRWETLMKPAKKAKVGTVIN 113
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F G +L+A V + + G + F GI + +G PLPPYI K
Sbjct: 114 F----GDGQLKAVVTKELDHGGREIEFQYDGI-FIEILERLGETPLPPYIKEKLDD---- 164
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK GS AAPTAGLH+T +LL ++ G+ + ++TLHVG GTF PV E+ +
Sbjct: 165 PDRYQTVYAKEMGSAAAPTAGLHWTKDLLKKVEDKGVHLVYLTLHVGLGTFRPVDEENIE 224
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNI 295
DH MHSE + A LN+V+ G+IV+ GTTS+R LET T+ DG I P SG+T+I
Sbjct: 225 DHKMHSEFYRLSDQAAATLNAVRDNSGKIVATGTTSIRTLETVGTKFDGQIRPDSGWTDI 284
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY++R V+ ++NFHLPKSTL+MLV++F G E YQHAI YRF+S+GD
Sbjct: 285 FIKPGYQWRVVNSFITNFHLPKSTLVMLVASFTGRENILNAYQHAIDEKYRFFSFGDAMY 344
Query: 356 L 356
+
Sbjct: 345 I 345
>gi|290967873|ref|ZP_06559423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
genomosp. type_1 str. 28L]
gi|290782012|gb|EFD94590.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
genomosp. type_1 str. 28L]
Length = 339
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 211/356 (59%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LP IA P PRD ARLMV ++ DL A L+ D +V
Sbjct: 1 MKLSDFSYELPKELIAQHPAEPRDHARLMVYDKITGA---VAHRYFYDLAAELHKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++VI A+L+G + ++ L V + W V +P K G + F
Sbjct: 58 FNDSRVIPARLHGKK----KETGGKVEVLLLTPVGEDCWEVLVKPGKKALPGTTIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
SRL ATV ++ + G ++ F G+ + + +G +PLPPYI K + +Y
Sbjct: 111 --SSRLCATVKERTDFGGRIVQFHYDGV-FDEILDQIGEMPLPPYIHEKMK----NPDEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT NL+ ++ + G++ FVTLHVG GTF PV+ E+ +DH M
Sbjct: 164 QTVYARERGSAAAPTAGLHFTRNLMEKIRAKGVETVFVTLHVGLGTFRPVEEENVEDHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A A+N K+ G R+V+VGTTS+R LE+A ++G++ SG+T+IFI PG
Sbjct: 224 HSEFYSVTPAAAAAVNRAKAEGRRVVAVGTTSIRTLESA-GKEGVVQAGSGWTDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y +R D L++NFHLP+STLLML+SA E+ + Y+ A++ YRF+S+GD +
Sbjct: 283 YTYRIADALVTNFHLPESTLLMLISAMSKREKILQAYRIAVAEGYRFFSFGDAMFI 338
>gi|310779236|ref|YP_003967569.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Ilyobacter
polytropus DSM 2926]
gi|309748559|gb|ADO83221.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Ilyobacter
polytropus DSM 2926]
Length = 343
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 131/356 (36%), Positives = 193/356 (54%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D++LP I P PRD +RLM+V+ I ++ L D +V
Sbjct: 4 RLSDYDYNLPEELIGQTPAEPRDHSRLMLVNKKTGD---IEHKRFYNIIDSLKEGDVLVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L R N+W +K +K G +
Sbjct: 61 NSTRVIPARLMGRKD-----TGAILEVFLLKRKDINTWECLIGNAKRLKIGQKVFIGE-- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L A + + G +L F G+ E + +G +PLPPYI+ K + YQ
Sbjct: 114 -NNELVAELKEIKEDGNRILTFDYEGV-FEEILDKLGQMPLPPYISEK----LSEKERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA SVAAPTAGLHFT +LL ++ G+++ + L VG GTF PV+ ED DH MH
Sbjct: 168 TVYAIKGESVAAPTAGLHFTEDLLEKIREKGVEIADLFLEVGLGTFRPVQTEDVLDHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + + + +N K G RI++VGTTS+R LE++ E+G + G T+IFI PGY
Sbjct: 228 EETYEVPEKSVEIINRAKEEGRRIIAVGTTSIRTLESSVDENGKLVAGKGTTDIFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F+ VD L++NFHLPKSTLLMLVSAF E +Y+ A+ Y+F+S+GD ++
Sbjct: 288 KFKIVDALITNFHLPKSTLLMLVSAFSSRELIMDVYEKAVIKKYQFFSFGDAMFIY 343
>gi|85708532|ref|ZP_01039598.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter sp.
NAP1]
gi|85690066|gb|EAQ30069.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter sp.
NAP1]
Length = 345
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 184/358 (51%), Positives = 235/358 (65%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRPV PRD+AR++VV + ++DH VSDLP L D +V
Sbjct: 1 MRVDLFDFELPQERIALRPVRPRDAARMLVVEGSQG---PLADHGVSDLPCLLRPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E +I TLH R+ W + R +K +K+GD L F
Sbjct: 58 FNDTRVIPAQLEGRRSGG----EAKIGATLHKRIDLRRWQAFIRNAKRVKEGDHLVFGGG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + G + L+F +E + GT+PLPPYIA++R +D +D DY
Sbjct: 114 -----VTAIAEKRHRDGSMTLLFE-GTEPVEVLLDRAGTMPLPPYIAQRRGVDDQDQSDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT+ L+S L GIK +TLHVGAGTF+PVK EDT DH M
Sbjct: 168 QTMFAAEDGAVAAPTASLHFTTRLVSALDHAGIKREMLTLHVGAGTFLPVKAEDTKDHQM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I+A TA +N ++ GGR+++VGTTSLRLLE+A EDG + ++G T+IFITPG
Sbjct: 228 HSEFGRINAGTASRINEARAAGGRVIAVGTTSLRLLESAAGEDGKLREFAGDTDIFITPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FR VD LM+NFHLPKSTL+MLVSA G E + Y+HAI+ YRFYSYGD+SLL
Sbjct: 288 YPFRVVDGLMTNFHLPKSTLMMLVSALMGRERMMEAYEHAIAQNYRFYSYGDSSLLLP 345
>gi|239998177|ref|ZP_04718101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 35/02]
gi|240015804|ref|ZP_04722344.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA6140]
gi|240079942|ref|ZP_04724485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA19]
gi|240112149|ref|ZP_04726639.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae MS11]
gi|240117099|ref|ZP_04731161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID1]
gi|240122734|ref|ZP_04735690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID332]
gi|240124926|ref|ZP_04737812.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-92-679]
gi|240127437|ref|ZP_04740098.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-93-1035]
gi|254492954|ref|ZP_05106125.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 1291]
gi|260441289|ref|ZP_05795105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI2]
gi|268594029|ref|ZP_06128196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 35/02]
gi|268596081|ref|ZP_06130248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA19]
gi|268598206|ref|ZP_06132373.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae MS11]
gi|268602784|ref|ZP_06136951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID1]
gi|268681333|ref|ZP_06148195.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID332]
gi|268683504|ref|ZP_06150366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-92-679]
gi|268685810|ref|ZP_06152672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-93-1035]
gi|226511994|gb|EEH61339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 1291]
gi|268547418|gb|EEZ42836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 35/02]
gi|268549869|gb|EEZ44888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA19]
gi|268582337|gb|EEZ47013.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae MS11]
gi|268586915|gb|EEZ51591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID1]
gi|268621617|gb|EEZ54017.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID332]
gi|268623788|gb|EEZ56188.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-92-679]
gi|268626094|gb|EEZ58494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-93-1035]
Length = 346
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGR 340
>gi|116490643|ref|YP_810187.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Oenococcus oeni PSU-1]
gi|290890058|ref|ZP_06553141.1| hypothetical protein AWRIB429_0531 [Oenococcus oeni AWRIB429]
gi|116091368|gb|ABJ56522.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Oenococcus
oeni PSU-1]
gi|290480249|gb|EFD88890.1| hypothetical protein AWRIB429_0531 [Oenococcus oeni AWRIB429]
Length = 359
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 137/362 (37%), Positives = 204/362 (56%), Gaps = 19/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD++LP IA P+ RD++RL++++ D D+ +LN DA+V N
Sbjct: 11 LSDFDYNLPHELIAQTPLKQRDASRLLLLNAKTGA---YEDKHFYDIIDYLNPGDALVMN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++VI A+L G R + + L + + W +P+K G ++ F + +
Sbjct: 68 NSRVIPARLRGWRP----ETKGHVEVLLLRQDHGDVWETLIKPAKKFPVGSVIDFGN-EN 122
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
++ + V+ + G + F GI + +G +PLPPYI K YQT
Sbjct: 123 ETIMTGKVVGELEHGGRYVEFQYDGI-FMELLDKLGEMPLPPYIKEKLKDQ----ERYQT 177
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+KI+GS AAPTAGLH+T LL ++ + GIK +TLHVG GTF PV+ E+ D H MHS
Sbjct: 178 VYSKIEGSAAAPTAGLHWTPELLDKVRAKGIKTIELTLHVGLGTFRPVEEENIDKHKMHS 237
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE------DGIINPWSGFTNIF 296
E + A +N V++ GGRIV+ GTT++R LET + G + SG+T+IF
Sbjct: 238 EFYQLSQAAADQINQVRNNGGRIVATGTTTIRTLETIGHKFNRDKYGGNVQADSGWTDIF 297
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+R+ VD ++NFHLPKSTL+MLV+AF G E Y+HAI YRF+S+GD +
Sbjct: 298 IKPGFRWTTVDAFITNFHLPKSTLVMLVAAFTGRENILNAYKHAIQEKYRFFSFGDAMFI 357
Query: 357 FQ 358
+
Sbjct: 358 HK 359
>gi|15677694|ref|NP_274855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis MC58]
gi|21263921|sp|Q9JXW4|QUEA_NEIMB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|7227116|gb|AAF42193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis MC58]
Length = 346
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 153/358 (42%), Positives = 208/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVLGR 340
>gi|186686064|ref|YP_001869260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nostoc
punctiforme PCC 73102]
gi|186468516|gb|ACC84317.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Nostoc
punctiforme PCC 73102]
Length = 401
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 156/387 (40%), Positives = 210/387 (54%), Gaps = 43/387 (11%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+D+ LPP IA P PRDS+RL+VV+ P S H+ DLPA L S D +V NNT
Sbjct: 21 YDYTLPPELIAQNPAVPRDSSRLLVVNSPTTGAETEASHHIFHDLPALLRSGDLLVMNNT 80
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF------ 118
+VI A+L G + +I L N W +P K K+G + F
Sbjct: 81 RVIPARLYGHK-----TTGAKIQVLLLEERQYNCWLALVKPGKSFKQGTKIIFEAKQRIG 135
Query: 119 -SQDGQSR-----------------------LEATVID-KWNTGEILLVFSIS-GIELER 152
S++ + R L ATV++ TG LL F + G L +
Sbjct: 136 DSKEAEGRSAGGRGENSSPCSLDFSPVTSQQLTATVLETDAATGGRLLQFDVPEGKPLVQ 195
Query: 153 QISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
+ + G +PLPPYI D YQT YA+ G++AAPTAGLHFT LL +L
Sbjct: 196 LLEVFGEVPLPPYITASSAAD----EQYQTVYAEQPGAIAAPTAGLHFTPQLLQKLRDRN 251
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I FVTLHVG GTF PV+VED H MH E + A T + + + K+ GGRI++VGTT+
Sbjct: 252 INQAFVTLHVGVGTFRPVEVEDVTTHQMHEEWIEVPAATVEQIRATKAAGGRIIAVGTTA 311
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LE A + G + + G T++FI PGY++R VD L++NFHLP+S+LLMLVSA G E
Sbjct: 312 VRALEGAA-KSGNLQAFCGKTDLFIYPGYQWRVVDGLITNFHLPRSSLLMLVSALIGRER 370
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
+Y AI+ YRFYS+GD L+ +
Sbjct: 371 LLNIYNEAIASKYRFYSFGDAMLILPE 397
>gi|293397754|ref|ZP_06641960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae F62]
gi|291611700|gb|EFF40769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae F62]
Length = 356
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 205/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVA----LSDMPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGR 350
>gi|213971539|ref|ZP_03399650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato T1]
gi|301386144|ref|ZP_07234562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato Max13]
gi|302060706|ref|ZP_07252247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato K40]
gi|302135099|ref|ZP_07261089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|213923731|gb|EEB57315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato T1]
Length = 354
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L S D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRSGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + GI+ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGIETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGQLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|83747288|ref|ZP_00944330.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum UW551]
gi|207744280|ref|YP_002260672.1| s-adenosylmethionine:trna ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Ralstonia solanacearum
IPO1609]
gi|83726112|gb|EAP73248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum UW551]
gi|206595685|emb|CAQ62612.1| s-adenosylmethionine:trna ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Ralstonia solanacearum
IPO1609]
Length = 362
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 203/356 (57%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ VH + + D +DL +L D +VFN
Sbjct: 10 LSDFDFDLPPELIAQTALPDRTASRLLAVHRD-APGTHFDDRQFADLVDYLRPGDLLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+ G + I + + ++ R SK G L
Sbjct: 69 DTRVIKARFFGHKAS-----GGRIEVLVERLLDEHTVLAQIRSSKSPVTGSRLRLADAFD 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L F +EL I G +PLPPYI D+ D YQT
Sbjct: 124 ------VTVGPRQEPFFTLRFPQPALEL---IEQYGRLPLPPYIEHT--PDSFDETRYQT 172
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H MHS
Sbjct: 173 VYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRMHS 232
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+ + ++ GGR+++VGTTS+R LE+A DG + SG T+IFITPGYR
Sbjct: 233 EWYAISPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLAAGSGETDIFITPGYR 292
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 293 FRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTR 348
>gi|240114895|ref|ZP_04728957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID18]
gi|268600551|ref|ZP_06134718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID18]
gi|268584682|gb|EEZ49358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID18]
Length = 346
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHAALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGR 340
>gi|145628563|ref|ZP_01784363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 22.1-21]
gi|144979033|gb|EDJ88719.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 22.1-21]
Length = 357
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 140/366 (38%), Positives = 203/366 (55%), Gaps = 17/366 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFDFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGTELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKVVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVKEKYRFFSYGDA 350
Query: 354 SLLFQK 359
+ +K
Sbjct: 351 MFINKK 356
>gi|325129515|gb|EGC52342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis OX99.30304]
gi|325135638|gb|EGC58255.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M0579]
gi|325207481|gb|ADZ02933.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis NZ-05/33]
Length = 346
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 153/358 (42%), Positives = 209/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGR 340
>gi|15675321|ref|NP_269495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes M1 GAS]
gi|71910953|ref|YP_282503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS5005]
gi|21263910|sp|Q99Z49|QUEA_STRP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13622501|gb|AAK34216.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes M1 GAS]
gi|71853735|gb|AAZ51758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS5005]
Length = 342
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNNFDFELPEELIAQTPLEKRDSSKLLIIDHRQKT---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+ID+ G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKATIIDELEHGGRIVEFSYDGI-FLEVLESLGEMPLPPYIHEKLED----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGGKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|71281922|ref|YP_267862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Colwellia
psychrerythraea 34H]
gi|91207419|sp|Q487A3|QUEA_COLP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71147662|gb|AAZ28135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Colwellia
psychrerythraea 34H]
Length = 359
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 149/363 (41%), Positives = 218/363 (60%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P R ++RLM ++ N I+D + +D+ A LNS D +V
Sbjct: 1 MRVSDFSFDLPEALIARYPKAERTASRLMTLNGNSGA---ITDGVFTDIVAQLNSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + N+ + R SK K G+ L ++
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKIEVLVERVIDQNTALAHIRASKSPKVGNELFLGNE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +++AT++ + G + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 DSDVKVKATMVAR--HGALFELKFNSDESVLTILDKIGHMPLPPYI--DRPDEDSDKERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL R+ + G+++ FVTLHVGAGTF PVKV++ DHIM
Sbjct: 169 QTVYNEKPGAVAAPTAGLHFDEALLERIKAKGVELAFVTLHVGAGTFQPVKVDEIADHIM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + + K+ GGR+V+VGTTS+R LE+A ++ ++ + G T+IF
Sbjct: 229 HAEYVEVSDEVVAQIAKTKAAGGRVVAVGTTSVRSLESAAKAALDKNKPLSAFYGDTDIF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG +F+ +D L++NFHL +STLLMLVSAF G + YQHAIS YRF+SYGD L
Sbjct: 289 ITPGCQFQIIDALVTNFHLSESTLLMLVSAFSGYDHIMSAYQHAISQEYRFFSYGDAMFL 348
Query: 357 FQK 359
++
Sbjct: 349 TKQ 351
>gi|330965894|gb|EGH66154.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 354
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L S D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRSGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDGHRVLAHVRASKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGHLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|323491585|ref|ZP_08096764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
brasiliensis LMG 20546]
gi|323314161|gb|EGA67246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
brasiliensis LMG 20546]
Length = 353
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLEQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + V S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERVVDEKSILAHVRCSKSPKPGSTIFVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EFSAEMVARHDA--LFELKFNSEQNVLAVLEEIGHMPLPPYI--DRPDEDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDEPLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDDIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRIV+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINAAKARGGRIVAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|206969507|ref|ZP_03230461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1134]
gi|229180694|ref|ZP_04308034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 172560W]
gi|229192629|ref|ZP_04319590.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10876]
gi|206735195|gb|EDZ52363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1134]
gi|228590936|gb|EEK48794.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10876]
gi|228602839|gb|EEK60320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 172560W]
Length = 350
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKLKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|83858653|ref|ZP_00952175.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanicaulis alexandrii HTCC2633]
gi|83853476|gb|EAP91328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanicaulis alexandrii HTCC2633]
Length = 357
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 184/363 (50%), Positives = 226/363 (62%), Gaps = 14/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP RIALRP PRDSARL+ V +SD V DLP L D +V
Sbjct: 4 MRLSDFDFHLPEDRIALRPARPRDSARLLQV-----KDGGLSDLGVLDLPNLLEPGDLLV 58
Query: 61 FNNTKVITAQLNGVRFC--HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI A L GVR H EI LH R W + RP+K +K+GD LHF
Sbjct: 59 FNDTRVIPAALTGVRPARAHGGGGGVEIEINLHKRDDEAVWRAFVRPAKRLKEGDTLHF- 117
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A V +K GE++L F +G+EL++ I G PLPPYIA KR DA D
Sbjct: 118 ----KGGLTAEVREKREGGEVVLTFDRAGVELDKAIVEAGAPPLPPYIASKRAADAADLE 173
Query: 179 DYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA GSVAAPTAGLHFT L + L + GIK VTLHVGAGTF+PVK ED
Sbjct: 174 DYQTVYAAPDKAGSVAAPTAGLHFTDRLFAALDARGIKRTHVTLHVGAGTFLPVKTEDLS 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E + A+ +N + GGRI++VGTTS+R LE+A EDG + + T IF
Sbjct: 234 EHQMHAEWYSVSEEAARTINETRKAGGRIIAVGTTSIRTLESAAEEDGTVRAEARDTAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG RF+ +D LM+NFHLPKSTL MLVSA G E+ Y HAI YRF+SYGD+SLL
Sbjct: 294 ITPGCRFKVIDALMTNFHLPKSTLFMLVSALAGFEDMHAAYAHAIREHYRFFSYGDSSLL 353
Query: 357 FQK 359
++K
Sbjct: 354 WRK 356
>gi|268592080|ref|ZP_06126301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rettgeri DSM 1131]
gi|291312475|gb|EFE52928.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rettgeri DSM 1131]
Length = 356
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 205/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R + RL+ + ++ + +D+ L D +V
Sbjct: 1 MRVSDFTFELPEELIAHYPQAERSACRLLSLDGGSG---QLTHGVFTDILEKLEHGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLFGRKVS-----GGKIEVLIERMLDEHRVLAHVRASKAPKEGAELLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + G + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---VKATMVAR--HGALFELRFDDERDVLSILNQIGHMPLPPYI--DRPDEESDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEALRQKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYEYQVIDALITNFHLPESTLIMLVSAFAGYKNTMNAYEEAVKQKYRFFSYGDAMFITP 345
>gi|254671005|emb|CBA07772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha153]
gi|308389957|gb|ADO32277.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria meningitidis alpha710]
Length = 356
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGR 350
>gi|161869357|ref|YP_001598524.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis 053442]
gi|189038528|sp|A9M1H2|QUEA_NEIM0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161594910|gb|ABX72570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis 053442]
Length = 346
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 153/358 (42%), Positives = 209/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVLGR 340
>gi|253999982|ref|YP_003052045.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. SIP3-4]
gi|253986661|gb|ACT51518.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. SIP3-4]
Length = 351
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 150/359 (41%), Positives = 210/359 (58%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LP IA P RD +RL+ + N I+DH +LP FLN+ D ++
Sbjct: 1 MRTEDFDFFLPEELIAQFPAAERDGSRLLRLDGNSGA---IADHQFRELPQFLNAGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + + + R S+ K G +
Sbjct: 58 FNDTRVIKARLQGHKES-----GGSIELLIERPLDTHRALAHIRASRSPKPGSRIFIGDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A VI++ ++ L+ L + G +PLPPYI DA D Y
Sbjct: 113 -----IPARVIER--QDDLFLIEVEHVTPLLDLLDQYGALPLPPYITHA--ADAEDDERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L RL + GI++ +VTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTIYARTPGAVAAPTAGLHFNQVMLDRLQAAGIQIAYVTLHVGAGTFQPVRVDDISEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI + T +N+ ++ G +I +VGTT+LR LE+A G + SG T+IFITPG
Sbjct: 224 HSEIYTVPPATVDLINTARAAGHKITAVGTTALRALESAARS-GALVAGSGETDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ V+ L++NFHLPKSTL+MLVSAF G+E + Y HAI+ YRF+SYGD LL ++
Sbjct: 283 YRFQVVERLLTNFHLPKSTLMMLVSAFAGVEHIRAAYAHAIASRYRFFSYGDAMLLERR 341
>gi|59800514|ref|YP_207226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA 1090]
gi|75432620|sp|Q5FAH3|QUEA_NEIG1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|59717409|gb|AAW88814.1| putative s-adenosyl methionine:tRNA ribosyltransferase-isomerase
[Neisseria gonorrhoeae FA 1090]
Length = 346
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 205/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVA----LSDMPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGR 340
>gi|28868619|ref|NP_791238.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato str. DC3000]
gi|37999794|sp|Q9L6W9|QUEA_PSESM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|8037772|gb|AAF71483.1|AF232004_1 QueA [Pseudomonas syringae pv. tomato]
gi|28851857|gb|AAO54933.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato str. DC3000]
gi|331019401|gb|EGH99457.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. lachrymans str. M302278PT]
Length = 354
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L S D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRSGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGQLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|24379107|ref|NP_721062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mutans UA159]
gi|46577053|sp|Q8DV72|QUEA_STRMU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|24377009|gb|AAN58368.1|AE014907_5 putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans UA159]
Length = 342
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP + IA P+ RDS++L+VV + D + LNS DA+V
Sbjct: 1 MNTSDFDFNLPEALIAQTPLKKRDSSKLLVVDHQKKT---MKDTHFDHIIDELNSGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----TVTHGHVELLLLKNIQGDQWEVLAKPAKRLKVGSHISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A + ++ + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKAIIKEELDHGGRIVEFSYEGI-FLEVLESLGEMPLPPYIHEKLED----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LLS++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLSKIEAKGVKLVYLTLHVGLGTFRPVSVDNVEEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGRIV+VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYSLSPEAAQTLKDVKANGGRIVAVGTTSIRTLETIGNKFAGQIEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKIVDAFSTNFHLPKSTLVMLVSAFAGRDFILDAYKHAVDKHYRFFSFGDAMFV 341
>gi|153829413|ref|ZP_01982080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 623-39]
gi|148875133|gb|EDL73268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 623-39]
Length = 352
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGSELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|27363914|ref|NP_759442.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus CMCP6]
gi|31076954|sp|Q8DEX9|QUEA_VIBVU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|27360031|gb|AAO08969.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus CMCP6]
Length = 350
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N + D D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQSERTASRLLQLNGNTGA---VKDGSFKDVLELVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + + R SK K G ++ +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKRFLAHVRSSKSPKPGTLVFLGEE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D S D + + + + +G +PLPPYI RP + D Y
Sbjct: 113 DQYSAEMVARQDALFE-----LHLKADKTILEVLEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF + LL ++ + G + +VTLHVGAGTF PVKV++ +H M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDNQLLEQIKAKGAEFAYVTLHVGAGTFQPVKVDNILEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII----NPWSGFTNIF 296
HSE + A+N+ K+RGGR+++VGTTS+R LE+A E P+ G T IF
Sbjct: 226 HSEYAEVPQEVVDAINATKARGGRVIAVGTTSVRSLESAAQESLKNGTELMPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G + T YQHA+S+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYDHTMNAYQHAVSNQYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 EKK 348
>gi|126739327|ref|ZP_01755020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. SK209-2-6]
gi|126719427|gb|EBA16136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. SK209-2-6]
Length = 356
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 167/360 (46%), Positives = 220/360 (61%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SAR++V P I D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPETLIATRPASPRSSARMLVA-----TPQEIHDQTVTDLIDWLKPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R + I TL S SW+ +P K IK G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRESAQGKTAARIEVTLLEPRSDGSWAGLLKPLKKIKLGERIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++ G+ LL F++ G + + ++ G +PLPPYIA KR DA+D
Sbjct: 116 D-----ALSAELVG-VEDGQGLLSFNLQGEDFDAALAQAGAMPLPPYIAAKRAADAQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF + LL L G+K VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVWAKNSGAVAAPTASLHFDTALLEALQEKGVKFTHVTLHVGAGTFLPVKVDDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + K+ GGR++ VGTT+LRL+E+A DG + PW G T+IFI
Sbjct: 230 KMHAEWGKVSEQAASEIAETKAAGGRVIPVGTTALRLIESAAR-DGRVEPWEGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+A D LM+NFHLPKSTLLML+SA G E +++Y HA+ YRF+SYGD SLL
Sbjct: 289 PGFSFQATDALMTNFHLPKSTLLMLISALMGQERVREIYAHAVEGEYRFFSYGDASLLLP 348
>gi|330872901|gb|EGH07050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. morsprunorum str. M302280PT]
Length = 354
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L S D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRSGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGHLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|91977073|ref|YP_569732.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisB5]
gi|123721830|sp|Q137A8|QUEA_RHOPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91683529|gb|ABE39831.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisB5]
Length = 360
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 191/362 (52%), Positives = 244/362 (67%), Gaps = 9/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP S IALRPV PRD+AR++VV P + D V DLPA L D +V
Sbjct: 1 MRTELFDFDLPASSIALRPVSPRDAARMLVVRPG----ATLEDRAVRDLPALLQPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E I TL R+ + W +P+K + +GD++ F
Sbjct: 57 VNDTRVIAAQLTGRRI--GRATEPRIEATLIKRLDGSRWQALVKPAKKLAEGDVVRFGHD 114
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K + GE+ L F+ G L++ I+ +G PLPPYIA KR D +D
Sbjct: 115 GRVCLLGHLDATVEAKGDAGEVTLAFTFHGPALDQAIAELGATPLPPYIASKRTPDDQDA 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT L + L + G+ ++ +TLHVGAGTF+PVKV+DT +
Sbjct: 175 ADYQTMFAANEGAVAAPTAGLHFTPELDAALKARGVTLHRLTLHVGAGTFLPVKVDDTAE 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G I TA ALN+ +++GGRIV+VGTTSLRLLE+A EDG I P++ T IFI
Sbjct: 235 HKMHAEWGTISEATADALNAARAQGGRIVAVGTTSLRLLESAAREDGTIAPFADETAIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD LM+NFHLP+STL MLVSAFCG+E + Y+HAI YRFYSYGD SLLF
Sbjct: 295 TPGYRFRAVDALMTNFHLPRSTLFMLVSAFCGLETMQAAYRHAIDSGYRFYSYGDASLLF 354
Query: 358 QK 359
++
Sbjct: 355 RE 356
>gi|116617730|ref|YP_818101.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096577|gb|ABJ61728.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 377
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 201/357 (56%), Gaps = 13/357 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP + IA P+ RD++RL+ ++ D D+ +LN DAIV N
Sbjct: 33 LSDFDYDLPEALIAQTPLKQRDASRLLALNAKTGG---YEDKHFYDILDYLNPGDAIVMN 89
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L+G R L + + W +P+K G + F
Sbjct: 90 NSRVLPARLHGARP----ETGGHAEVLLLRQDHGDVWETLVKPAKKSPVGSTIVFGDDIE 145
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ATV+ + G + F GI ++ +G +PLPPYI K YQT
Sbjct: 146 NPIMTATVVGELEHGGRYIEFHYDGI-FMELLNQLGEMPLPPYIKEKLDDQ----ERYQT 200
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K+ GS AAPTAGLH+T LL R+ + G+K +TLHVG GTF PV E+ +DH MHS
Sbjct: 201 VYSKVDGSAAAPTAGLHWTPELLDRVRAKGVKTVELTLHVGLGTFRPVDEENIEDHKMHS 260
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LNSV+ GGRI++ GTTS+R LET T+ +G + SG+T+IFI PGY
Sbjct: 261 EFYQLSQEAADELNSVRKHGGRIIATGTTSIRTLETIGTKFNGDLTADSGWTDIFIKPGY 320
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ VD ++NFHLPKSTL+MLV+AF G + Y+HA+ YRF+S+GD + +
Sbjct: 321 NWTVVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYKHAVDDQYRFFSFGDAMFIHK 377
>gi|300310560|ref|YP_003774652.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase)protein [Herbaspirillum seropedicae SmR1]
gi|300073345|gb|ADJ62744.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase)protein [Herbaspirillum seropedicae SmR1]
Length = 338
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 202/356 (56%), Gaps = 22/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA P+ R ++RL+ V ++D SD+ L + D +VFN
Sbjct: 4 LSDFDFELPPELIAQTPLAERSASRLLQVQG-----AQLTDRRFSDIVDLLQAGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L GV+ +I + + P + R SK G +
Sbjct: 59 DTRVIKARLFGVKE-----TGGKIEALVERILDPRTVHAQVRASKSPPPGTRIRLAD--- 110
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
E TV +++ L + + G++PLPPYI DA D YQT
Sbjct: 111 --AFEVTVGERFGEFYTLHF----PEDAFALLEQYGSLPLPPYI--DHEADAYDETRYQT 162
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK G+VAAPTAGLHF LL +L + G++ FVTLHVGAGTF PV+VED H MHS
Sbjct: 163 VYAKEPGAVAAPTAGLHFDQALLEQLAARGVQQAFVTLHVGAGTFQPVRVEDLSQHKMHS 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T +A+ + K+ G R+++VGTTS+R LE+ ++ G + S T +FITPGY
Sbjct: 223 EWYTIPPETVEAVRAAKAAGRRVIAVGTTSMRALES-GSQSGALKAGSDDTQLFITPGYT 281
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ VD L++NFHLPKSTLLMLVSAF G E + Y HAI+ YRF+SYGD LL +
Sbjct: 282 FKTVDQLVTNFHLPKSTLLMLVSAFAGYELIRAAYAHAIAQKYRFFSYGDAMLLTR 337
>gi|95929301|ref|ZP_01312045.1| S-adenosylmethionine [Desulfuromonas acetoxidans DSM 684]
gi|95134799|gb|EAT16454.1| S-adenosylmethionine [Desulfuromonas acetoxidans DSM 684]
Length = 350
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 194/360 (53%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F++DLP IA P RD +RLMV+ I + + D +V
Sbjct: 1 MYVTDFNYDLPQELIAQHPCEQRDGSRLMVLDCQ---AEKIVSDHFRQVDRYFEQGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G + ++ L ++ W R SK + G L
Sbjct: 58 INDTRVIPARLLGCKES-----GGKVEVFLVRKLAEEGECWLCLTRASKGPRPGTRLLLG 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q L ATV++ G + F + G + + +G +PLPPYI R D
Sbjct: 113 DQ-----LTATVMEGGGDGYRHIRFDVEG-DFLSLLDKIGRLPLPPYI--DREPQGEDRE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQTT++ G+VAAPTAGLHFT +L +L + G+ V +TLHVG GTF+PV+V++ ++H
Sbjct: 165 RYQTTFSSRPGAVAAPTAGLHFTPEILDKLRAKGVIVCPLTLHVGLGTFLPVRVDNVEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E I TA +N K G R++++GTT R LE + G + G T++FI
Sbjct: 225 RMHAEAYCIPDETAVQVNRAKREGRRVIALGTTVTRTLEFSVDPQGELQAGDGMTDMFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRF+ VD L++NFHLP+STLLMLVSA G E + Y+ A+ YRF+SYGD L+
Sbjct: 285 PGYRFKIVDALLTNFHLPQSTLLMLVSALAGREFVLQAYRQAVEERYRFFSYGDCMLIHN 344
>gi|222148799|ref|YP_002549756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium vitis S4]
gi|254764261|sp|B9JWX0|QUEA_AGRVS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221735785|gb|ACM36748.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium vitis S4]
Length = 352
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 219/359 (61%), Positives = 263/359 (73%), Gaps = 9/359 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD AR ++V P+ S L++ D V +LP+FL + DA+V
Sbjct: 1 MRVDLFDFDLPDENIALRPANPRDQARFLIVRPDGS--LMLEDRRVFELPSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR R +SCTLHMRV+ N W +ARP K IK+GD++ F
Sbjct: 59 FNDTKVIPAQLEGVRIREGAERTP-VSCTLHMRVAANRWKAFARPGKRIKQGDVIDF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K GEI L F+ SG +L+R I+ VG IPLPPYIA KRP D++D DY
Sbjct: 115 ---DGLSANVAEKGEAGEIDLEFAASGPDLDRAIAGVGHIPLPPYIAAKRPEDSQDRTDY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTDDH M
Sbjct: 172 QTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTDDHKM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H EIG + A TA+ALN+VK+RGGRIVSVGTTSLRLLE+A +EDG + PWS T IFITPG
Sbjct: 232 HQEIGHVSAETAEALNAVKARGGRIVSVGTTSLRLLESAASEDGRLLPWSDATGIFITPG 291
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+AVD+LM+NFHLPKSTL MLVSAF G+E + Y HAI YRFYSYGD+SLLF+K
Sbjct: 292 YRFKAVDVLMTNFHLPKSTLFMLVSAFAGLETMRAAYAHAIETGYRFYSYGDSSLLFRK 350
>gi|300690474|ref|YP_003751469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum PSI07]
gi|299077534|emb|CBJ50160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum PSI07]
Length = 350
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 203/356 (57%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V + P D +DL +L D ++FN
Sbjct: 4 LSDFDFDLPPELIAQTALPDRTASRLLAVRRDAQGP-HFDDRQFADLVDYLRPGDLLIFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+ G + +I + + + R SK G L
Sbjct: 63 DTRVIKARFFGHKAS-----GGKIEVLVERLLDEYTVLAQIRSSKSPVAGSTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F +EL I G +PLPPYI D+ D YQT
Sbjct: 118 ------VTVGPRHEPFFTLRFPQPALEL---IEQYGRLPLPPYIEHT--PDSFDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYARNPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+ + ++ GGRI++VGTTS+R LE+A DG + SG T+IFITPGYR
Sbjct: 227 EWYAISPALAEAIRATRAAGGRIIAVGTTSMRALESAARPDGTLAAGSGETDIFITPGYR 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 287 FRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTR 342
>gi|283770714|ref|ZP_06343606.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus H19]
gi|283460861|gb|EFC07951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus H19]
Length = 341
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGEMKYL---HFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|121729720|ref|ZP_01682161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae V52]
gi|147675363|ref|YP_001216225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O395]
gi|229513121|ref|ZP_04402587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TMA 21]
gi|229530130|ref|ZP_04419520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 12129(1)]
gi|254285458|ref|ZP_04960422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae AM-19226]
gi|262168811|ref|ZP_06036506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC27]
gi|172047703|sp|A5F3H1|QUEA_VIBC3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|121628537|gb|EAX61020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae V52]
gi|146317246|gb|ABQ21785.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O395]
gi|150424320|gb|EDN16257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae AM-19226]
gi|227012563|gb|ACP08773.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O395]
gi|229333904|gb|EEN99390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 12129(1)]
gi|229350014|gb|EEO14968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TMA 21]
gi|262022929|gb|EEY41635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC27]
Length = 352
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|121634226|ref|YP_974471.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis FAM18]
gi|120865932|emb|CAM09669.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria meningitidis FAM18]
Length = 359
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 14 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 70 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 122 --EGGIRAVTVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 176 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 236 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 296 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 351
>gi|297581139|ref|ZP_06943063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC385]
gi|297534455|gb|EFH73292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC385]
Length = 352
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEEADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHIMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|299133970|ref|ZP_07027164.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Afipia sp.
1NLS2]
gi|298591806|gb|EFI52007.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Afipia sp.
1NLS2]
Length = 361
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 190/360 (52%), Positives = 241/360 (66%), Gaps = 9/360 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLPP IALRPV PR+SARL+VV P + D+ V DLP L + D +V
Sbjct: 1 MRTDLFDFDLPPESIALRPVEPRESARLLVVRPGDG----LDDYTVRDLPDLLRAGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL G R E I TL RV + W RP++ + +GD++ F ++
Sbjct: 57 VNDTKVIAAQLAGRRV--GGATEPRIDVTLIKRVDGSRWQALVRPARKLAEGDVVRFGNE 114
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K GEI L F+ G L++ I+ +G PLPPYIA +R D +D
Sbjct: 115 GRVCLLGNLDATVEAKGEAGEITLSFAFHGPVLDQAIADLGAPPLPPYIASRRAPDEKDV 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +AK +G+VAAPTAGLHFT L + L + GI V +TLHVGAGTF+PVK +DT D
Sbjct: 175 GDYQTMFAKHEGAVAAPTAGLHFTPALEAALQARGIGVQRLTLHVGAGTFLPVKTDDTAD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G I A TA+ LN +++GGRIV+VG+T++RLLE+A E+G I P++G T IFI
Sbjct: 235 HKMHAEWGTISAETARTLNEARAKGGRIVAVGSTAMRLLESAADENGTIQPFTGETAIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD++M+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LLF
Sbjct: 295 TPGYRFRAVDVMMTNFHLPRSTLFMLVSAFSGLETMQAAYAHAIEKGYRFYSYGDACLLF 354
>gi|153802811|ref|ZP_01957397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-3]
gi|124121636|gb|EAY40379.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-3]
Length = 352
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGSELKPFFGDTKIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|88858512|ref|ZP_01133154.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas tunicata D2]
gi|88820129|gb|EAR29942.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas tunicata D2]
Length = 345
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S+RL+ ++ N I + SD+ F+ D +V
Sbjct: 1 MRVADFNFDLPDELIARFPKEERTSSRLLKMNGNSG---EIEHCVFSDIINFIGPKDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A++ G + +I + + + + R SK K G +L
Sbjct: 58 FNNTKVIPARMFGQKAS-----GGKIEVLIERVLDEHRVLAHVRASKSPKAGALLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ EAT++ + GE+ + + + +G +PLPPYI RP + D Y
Sbjct: 110 --ENSAEATMVQR--HGELFELKFHGDNNVLDILENIGHMPLPPYI--DRPDNESDRKRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ L + G+++ FVTLHVGAGTF PV+ + D+H+M
Sbjct: 164 QTVYGEKPGAVAAPTAGLHFDEKLMADLKAKGVEMAFVTLHVGAGTFQPVRAQTVDEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + A+ K+RGGR+++VGTTS+R LE+A G + + G T+IFI P
Sbjct: 224 HSEYIEVPDDVVAAIVKTKARGGRVIAVGTTSVRSLESAAKQSQGELKSYFGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ +D +++NFHLP+STL+MLVSAF G E Y AI+ YRF+SYGD L +K
Sbjct: 284 GYQFQVIDAMITNFHLPESTLIMLVSAFAGQENIMNAYNVAIAEQYRFFSYGDAMFLERK 343
>gi|325141611|gb|EGC64075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis 961-5945]
gi|325197642|gb|ADY93098.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis G2136]
Length = 346
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 338
>gi|297207639|ref|ZP_06924074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|296887656|gb|EFH26554.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC 51811]
Length = 347
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 8 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVEMSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 347
>gi|269468922|gb|EEZ80506.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase [uncultured
SUP05 cluster bacterium]
Length = 340
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 199/358 (55%), Gaps = 22/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ +FDF+LP IA P R + L+V I D + F++ D +V
Sbjct: 1 MLLSDFDFNLPNELIAQHPPKKRTDSNLLV------AQSTIIDTKFHKIEDFISPGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + ++ + ++ + + S+ K + +
Sbjct: 55 MNNTRVIPARLFGHKES-----GGKVEIMIERLLNDHQVLAMMKASRAPKIDSFITIENG 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A VI K N L + L + VG IPLPPYI R + D Y
Sbjct: 110 E-----KAQVISKKNGFYTL---NFITNSLLDLLDNVGHIPLPPYIE--RGDEQADLERY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +G+VAAPTAGLHF LL L + G+ FVTLHVGAGTF PVK + DH M
Sbjct: 160 QTVFAKHEGAVAAPTAGLHFDDELLLSLKTKGVDHCFVTLHVGAGTFQPVKADKITDHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID T +N KS GGRI++VGTT++R +E+A + G + G T+IFI PG
Sbjct: 220 HSEYFEIDQITVDKINQTKSNGGRIIAVGTTAVRSVESAA-KSGTLKAIKGETDIFIYPG 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ VD L++NFHLPKS+LLMLVSAF G ++ ++YQHAI YRF+SYGD LL +
Sbjct: 279 YEFKIVDKLITNFHLPKSSLLMLVSAFIGRDKMMEIYQHAIDKKYRFFSYGDAMLLEK 336
>gi|253732296|ref|ZP_04866461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253733109|ref|ZP_04867274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH130]
gi|282908959|ref|ZP_06316777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282911276|ref|ZP_06319078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WBG10049]
gi|297590817|ref|ZP_06949455.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MN8]
gi|253724085|gb|EES92814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253728865|gb|EES97594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH130]
gi|282324971|gb|EFB55281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327223|gb|EFB57518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|297575703|gb|EFH94419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MN8]
gi|312437893|gb|ADQ76964.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH60]
Length = 347
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 8 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 347
>gi|251782850|ref|YP_002997153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis GGS_124]
gi|242391480|dbj|BAH81939.1| S-adenosylmethionine/tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis GGS_124]
Length = 342
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ ++ D + LN DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHEQ---KIMIDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKP----DTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ F+ GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFNYEGI-FLEVLESLGEMPLPPYIHEKLDD----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LLS++ + G+ + ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLSKIDAKGVHLVYLTLHVGLGTFRPVSVDNLDDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GG +V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKKAGGHVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGDAMFV 341
>gi|70732299|ref|YP_262055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf-5]
gi|91207394|sp|Q4K6S8|QUEA_PSEF5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|68346598|gb|AAY94204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf-5]
Length = 354
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRGSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSKI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMLARH--------DTLFELGFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRLGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVERIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HHEWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y+ A+ + YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYRAAVENGYRFFSYGDAMFITR 338
>gi|298694919|gb|ADI98141.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ED133]
Length = 354
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 15 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 71
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 72 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + YQ
Sbjct: 124 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 179 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 239 SEYYQMAQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 299 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 354
>gi|82751238|ref|YP_416979.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus RF122]
gi|82656769|emb|CAI81198.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus RF122]
Length = 354
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 15 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 71
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 72 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + YQ
Sbjct: 124 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 179 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 239 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 299 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 354
>gi|269941125|emb|CBI49511.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TW20]
Length = 341
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 206/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGCTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|152996661|ref|YP_001341496.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Marinomonas sp. MWYL1]
gi|189038527|sp|A6VYN2|QUEA_MARMS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150837585|gb|ABR71561.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Marinomonas sp. MWYL1]
Length = 353
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 138/358 (38%), Positives = 205/358 (57%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V ++ FDLP S IA P+ R ++RL+ + + + D+ + D +V
Sbjct: 1 MLVSDYHFDLPDSLIANYPMPDRTASRLLHLDGHSG---EVVHRQFPDVLDLVQPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + ++ N + R SK K+ L
Sbjct: 58 FNNTRVIPARVFGQKES-----GGKVEILVERVINVNEALAHVRASKSPKESSKLILGQD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +EAT+I + L+ + + G +PLPPYI RP + D Y
Sbjct: 113 KGE-HIEATMIGRSGALFHLVF----DEPVLDVLMRAGHMPLPPYIE--RPDEDSDQERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL +L + G++ FVTLHVGAGTF P+KVE+ DHIM
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDEALLEKLKAKGVETAFVTLHVGAGTFQPMKVENVKDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E ++ + + + K+RGGR+++VGTTS+R LE+A+ G I P G T+IFI PG
Sbjct: 226 HAEYVEVEPSVVEQVKAAKARGGRVIAVGTTSVRSLESASQS-GEIAPMQGDTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ VD L++NFHLP+STL+ML+SAF G + Y+ A+ YRF+SYGD + +
Sbjct: 285 YEFKTVDALVTNFHLPESTLIMLISAFAGYDHVMAAYKKAVEQKYRFFSYGDAMFVTR 342
>gi|298492038|ref|YP_003722215.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase ['Nostoc
azollae' 0708]
gi|298233956|gb|ADI65092.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase ['Nostoc
azollae' 0708]
Length = 372
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 153/368 (41%), Positives = 209/368 (56%), Gaps = 23/368 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D++LPP IA P PRD++RL+VV+ PN+ + +H+ DLP L D +V
Sbjct: 15 LSGYDYELPPELIAQNPAVPRDTSRLLVVNSPNIGEEIPALNHIFRDLPDLLQPGDLLVM 74
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L G + E+ L PN W +P K K G + F
Sbjct: 75 NNTKVMPARLYGRKL-----TGAEVEVLLLEEKQPNCWLALVKPGKHFKVGTKIIFGGNK 129
Query: 122 ----------GQSRLEATVIDK-WNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARK 169
L A V+DK TG LL F + L + + G IPLPPYI
Sbjct: 130 LGRAKHPATTNDDELMAIVVDKDTATGGRLLQFDLPEYRSLVQVLENFGEIPLPPYITGS 189
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D YQT YA+ G++AAPTAGLHFT LL +L + GI F+TLHVG GTF P
Sbjct: 190 TAAD----EQYQTVYAQQTGAIAAPTAGLHFTPELLEKLRARGINQAFLTLHVGVGTFRP 245
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VED H MHSE +++ T + + + K+ GGRI+++GTT +R LE A G + P+
Sbjct: 246 VEVEDVTTHQMHSEWIEVNSATVEEIRATKAAGGRIIAIGTTVVRALEGAAQS-GDLQPY 304
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G N+FI PGY+++ V+ L++NFHLP+S+LLMLVSA G E K+YQ AI+ YRFYS
Sbjct: 305 VGKVNLFIYPGYQWQVVEGLITNFHLPRSSLLMLVSALIGRERLLKIYQQAIASQYRFYS 364
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 365 FGDAMLIL 372
>gi|315641796|ref|ZP_07896800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus italicus DSM 15952]
gi|315482471|gb|EFU73010.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus italicus DSM 15952]
Length = 343
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 150/355 (42%), Positives = 207/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+V+ ++D ++ LN+ DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLTDRASSRLLVLDRKT---KEMADKHFYEIIDELNAGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L GV+ + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGVK----EETGAHLELLLLNNTEGDTWETLIKPAKRAKVGTEITF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ + G ++ F GI + +G +PLPPYI + YQT
Sbjct: 113 DGRLKAIVEEELDHGGRMIRFVYEGI-FLEILESLGEMPLPPYIKERLED----PERYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +H MHS
Sbjct: 168 VYAKENGSAAAPTAGLHFTKELLEKIQAKGVHLVYLTLHVGLGTFRPVSVDNIAEHEMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A L +V+ GGRIV+VGTTS+R LET T+ DG I SG+TNIFI PGY
Sbjct: 228 EFYRLTQEAADELTAVRDAGGRIVAVGTTSIRTLETIGTKFDGAIQADSGWTNIFIKPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD +
Sbjct: 288 QFKLVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDEKYRFFSFGDAMFV 342
>gi|313884160|ref|ZP_07817926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eremococcus
coleocola ACS-139-V-Col8]
gi|312620607|gb|EFR32030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eremococcus
coleocola ACS-139-V-Col8]
Length = 344
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 205/360 (56%), Gaps = 19/360 (5%)
Query: 1 MMVK--EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
M + +FD++LP IA P+ R S+RL+V+ + + D + +L + D
Sbjct: 1 MTLSTKDFDYELPEELIAQTPLKDRSSSRLLVIDRHT---DQLMDTDFKHILDYLQAGDG 57
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V N T+VI A++ G + + L N W +P++ K G + F
Sbjct: 58 LVVNETRVIPARIIGTKP----ETGGHLEVLLLHNREGNEWETLVKPARRAKVGTKISF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
GQ +L A V ++ + G ++ F G+ + +G +PLPPYI K
Sbjct: 113 ---GQGQLTAIVKEELDHGGRIIEFDYQGV-FLEILEELGQMPLPPYIKEKLND----PD 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL + GI++ + LHVG GTF PV V++ +DH
Sbjct: 165 RYQTVYAKENGSAAAPTAGLHFTPELLEAAKAKGIEIIPLVLHVGLGTFRPVSVDNIEDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MH+E + +AQA+N +K+ GG+I +VGTTS+R LET + + +G + SG+T+IFI
Sbjct: 225 DMHAEFYQLSDQSAQAINRIKAAGGKITAVGTTSVRTLETISHKFEGKLVADSGWTSIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+ ++ VD L++NFHLP+STL+MLVSAF E+ Y HA+ YRF+S+GD LL
Sbjct: 285 TPGFDYQVVDHLITNFHLPQSTLVMLVSAFYDREKILAAYDHAVKEKYRFFSFGDAMLLL 344
>gi|257793713|ref|ZP_05642692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9781]
gi|258410988|ref|ZP_05681268.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9763]
gi|258420211|ref|ZP_05683166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9719]
gi|300911722|ref|ZP_07129165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH70]
gi|257787685|gb|EEV26025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9781]
gi|257840138|gb|EEV64602.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9763]
gi|257843922|gb|EEV68316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9719]
gi|300885968|gb|EFK81170.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH70]
Length = 347
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 8 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 347
>gi|159028722|emb|CAO88194.1| queA [Microcystis aeruginosa PCC 7806]
Length = 365
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 140/365 (38%), Positives = 193/365 (52%), Gaps = 22/365 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LPP IA P PRDS+RL+VV S L I DLP +L D +V N
Sbjct: 7 LSSYDYHLPPELIAQNPAEPRDSSRLLVVDSPNSHNLAI----FRDLPTWLEPGDLLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + + L + W +P K K G + F+ + G
Sbjct: 63 DTRVIPARLFGRKV-----TGAPVEILLLEEQDDHRWLSLVKPGKRFKVGSEVLFYPKTG 117
Query: 123 QSR-------LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
++ + D +G +L G + G IP PPY+ +
Sbjct: 118 RTEDKEKLWLAKVIDRDLNTSGRLLEFQRRPGRSFWDMLEEYGHIPFPPYVTESEAEED- 176
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT Y QGSVAAPTAGLHFT L +L GI ++TLHVG GTF PV+VE+
Sbjct: 177 ---RYQTVYGNKQGSVAAPTAGLHFTPELFHKLAQKGIDTTYITLHVGVGTFRPVEVENI 233
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN--PWSGFT 293
+H+MH E I A TA+ + K+RGGR+++VGTT R LE A E + G T
Sbjct: 234 TEHLMHREFLEISAETAEKIAQTKARGGRVIAVGTTVARALEGAIKETKSDKLTAFQGKT 293
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N+F+ PGY++R +D +++NFHLPKS+L+MLVSA G E +YQ AI +RFYS+GD
Sbjct: 294 NLFVYPGYQWRVIDGMITNFHLPKSSLMMLVSALVGRERLLALYQAAIQERFRFYSFGDA 353
Query: 354 SLLFQ 358
L+
Sbjct: 354 MLILP 358
>gi|153824631|ref|ZP_01977298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-2]
gi|149741849|gb|EDM55878.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-2]
Length = 352
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D D+ F+ D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLTDGTFKDVLGFVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII----NPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVIAVGTTSVRSLESAAQDALKNGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|284052392|ref|ZP_06382602.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthrospira
platensis str. Paraca]
Length = 405
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 158/366 (43%), Positives = 199/366 (54%), Gaps = 26/366 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ NNT+
Sbjct: 48 YDYELPPDRIAQNPVIPRDSSRLLVVD----SPQSHQHRLFRDLPDLLQPQDLLILNNTR 103
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L G + I L +PN W +P K K GD L F S+ G
Sbjct: 104 VLPARLYGRKSRS-----AAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFQSKSGGEI 158
Query: 126 LEATVID-KWNTGEILLVFS-ISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L ATVID +TG LL F G L + G IP PPY+ YQT
Sbjct: 159 LYATVIDTNPSTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVT----DSQALAEQYQTI 214
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
Y G+VAAPTAGLHFT L RL I FVTLHVG GTF PV+VED H MH+E
Sbjct: 215 YGDRPGAVAAPTAGLHFTEQLFQRLSQQHIDHAFVTLHVGLGTFRPVEVEDITTHQMHAE 274
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGII--NPWSGFTNIFITP 299
+ T + +N ++RGGRI++VGTT +R LE A G P+ G N+FI P
Sbjct: 275 WVELPPETVEKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSGDRSIQPYCGEINLFIYP 334
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-------HAYRFYSYGD 352
GYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ + YRFYS+GD
Sbjct: 335 GYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYSFGD 394
Query: 353 TSLLFQ 358
L+
Sbjct: 395 AMLILP 400
>gi|225870087|ref|YP_002746034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. equi 4047]
gi|225699491|emb|CAW93030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. equi 4047]
Length = 342
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD ++L+++ ++D + L DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDRSKLLIIDHQ---EHTMTDSHFDHIIDQLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKM----ETHGHVELLLLKNIQGDQWEVLAKPAKRLKAGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A VI + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLKARVIQELEHGGRIVEFSYDGI-FLEILETLGEMPLPPYIHEKLAD----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNIDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGRI++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYLLSEEAAQTLRKVKAAGGRIIAVGTTSIRTLETIGSKFQGQILADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAIDEHYRFFSFGDAMFV 341
>gi|299065736|emb|CBJ36912.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum CMR15]
Length = 362
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 201/356 (56%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ + D +DL +L D +VFN
Sbjct: 10 LSDFDFDLPPELIAQTALPDRTASRLLAARRDAQDT-HFDDRQFADLVDYLRPGDLLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+ G + I + + ++ R SK G L
Sbjct: 69 DTRVIKARFFGHKAS-----GGRIEVLVERLLDEHTVLAQIRSSKSPVAGSTLRLADAFD 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F +EL I G +PLPPYI D+ D YQT
Sbjct: 124 ------VTVGPRHEPFFTLRFPQPALEL---IEQYGRLPLPPYIEHT--PDSFDETRYQT 172
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H MHS
Sbjct: 173 VYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRMHS 232
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+ + ++ GGRIV+VGTTS+R LE+A DG + SG T+IFITPGYR
Sbjct: 233 EWYAISPELAEAIRATRAAGGRIVAVGTTSMRALESAAQPDGTLAAGSGETDIFITPGYR 292
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 293 FRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTR 348
>gi|229076049|ref|ZP_04209020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-18]
gi|229098892|ref|ZP_04229828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-29]
gi|229117918|ref|ZP_04247280.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-3]
gi|228665575|gb|EEL21055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-3]
gi|228684565|gb|EEL38507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-29]
gi|228707083|gb|EEL59285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-18]
Length = 354
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYKFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|226939526|ref|YP_002794599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Laribacter
hongkongensis HLHK9]
gi|226714453|gb|ACO73591.1| QueA [Laribacter hongkongensis HLHK9]
Length = 380
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 151/359 (42%), Positives = 209/359 (58%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P R ++RL+ V P ++D +DLP L+ +D +V
Sbjct: 38 MQLSDFDYHLPEHLIAQFPPAERGNSRLLHV-----SPAGLADLQFADLPGLLSPDDLLV 92
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + + + + + R SK K G L F
Sbjct: 93 VNDTRVIKARLFGRKAS-----GGAVEALVERVLDERTALAHVRASKSPKPGSRLVFAD- 146
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
R EA ++++ GE+ L+ + + G +PLPPYI R D Y
Sbjct: 147 ----RWEAEMVER--QGELFLLRFPGDTSVLDILDAAGHLPLPPYIT--RSAGDNDDERY 198
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ QG+VAAPTAGLHFT L++ + + GI V VTLHVGAGTF PV+V++ +H M
Sbjct: 199 QTIYAREQGAVAAPTAGLHFTDGLMAAIRARGIDVARVTLHVGAGTFQPVRVDNIAEHKM 258
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T A+ + ++RGGR+V+VGTTS+R LE A + G + T+IFITPG
Sbjct: 259 HSERFVIPQATVDAIAACRARGGRVVAVGTTSMRALE-AGAQSGELRAGPSETDIFITPG 317
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR VD L++NFHLPKSTL+MLVSAF G E + Y+HAI YRF+SYGD LL ++
Sbjct: 318 YRFRVVDRLVTNFHLPKSTLMMLVSAFAGTETIRAAYRHAIERQYRFFSYGDAMLLERQ 376
>gi|229525386|ref|ZP_04414791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae bv. albensis VL426]
gi|229338967|gb|EEO03984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae bv. albensis VL426]
Length = 352
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGSELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|262190477|ref|ZP_06048728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae CT 5369-93]
gi|262033649|gb|EEY52138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae CT 5369-93]
Length = 352
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEEADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|153217324|ref|ZP_01951075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 1587]
gi|124113665|gb|EAY32485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 1587]
Length = 352
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 N-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGSELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|15640758|ref|NP_230388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O1 biovar El Tor str. N16961]
gi|121591366|ref|ZP_01678651.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 2740-80]
gi|153818849|ref|ZP_01971516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae NCTC 8457]
gi|153822721|ref|ZP_01975388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|227080918|ref|YP_002809469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae M66-2]
gi|229505646|ref|ZP_04395156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae BX 330286]
gi|229510682|ref|ZP_04400161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|229517804|ref|ZP_04407248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC9]
gi|229608664|ref|YP_002879312.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MJ-1236]
gi|254847876|ref|ZP_05237226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MO10]
gi|255744547|ref|ZP_05418498.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholera CIRS 101]
gi|262161319|ref|ZP_06030430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae INDRE 91/1]
gi|298499127|ref|ZP_07008934.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MAK 757]
gi|21263923|sp|Q9KTZ1|QUEA_VIBCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764289|sp|C3LSZ2|QUEA_VIBCM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|9655184|gb|AAF93904.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O1 biovar El Tor str. N16961]
gi|121546782|gb|EAX56952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 2740-80]
gi|126510631|gb|EAZ73225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae NCTC 8457]
gi|126519752|gb|EAZ76975.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|227008806|gb|ACP05018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae M66-2]
gi|229344519|gb|EEO09493.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC9]
gi|229350647|gb|EEO15588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|229357869|gb|EEO22786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae BX 330286]
gi|229371319|gb|ACQ61742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MJ-1236]
gi|254843581|gb|EET21995.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MO10]
gi|255737578|gb|EET92972.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholera CIRS 101]
gi|262029069|gb|EEY47722.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae INDRE 91/1]
gi|297543460|gb|EFH79510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MAK 757]
Length = 352
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEEADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAITATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|304380763|ref|ZP_07363431.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|304340700|gb|EFM06632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|320140473|gb|EFW32327.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320144012|gb|EFW35781.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA177]
Length = 347
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 8 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLII 347
>gi|316985467|gb|EFV64414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis H44/76]
gi|325133504|gb|EGC56167.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M13399]
gi|325200917|gb|ADY96372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis H44/76]
Length = 346
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATARLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVLGR 340
>gi|145589968|ref|YP_001156565.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|189038872|sp|A4SZT7|QUEA_POLSQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145048374|gb|ABP35001.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 348
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 195/358 (54%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+++LPP IA P+ R +RL+ V + + D D+ D +V
Sbjct: 1 MQLSDFNYELPPELIAQHPLANRTDSRLLEVRADGMNHAHLVDRQFKDILILAQPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L+G + + + V R SKV K G +H ++Q
Sbjct: 61 FNDTKVIPARLHGKKE-----TGGNVELLIERISGEKQAWVQIRASKVPKTGSTVHIYNQ 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ +I +L + + G +PLPPYI + D D Y
Sbjct: 116 SGET-FSVEMIGYDGRFYEVLFPDH----VFSLLERFGKLPLPPYIEHQ--PDGEDAQRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT AK G+VAAPTAGLHF +L +L +G+ VTLHVGAGTF PV+ ED H M
Sbjct: 169 QTVVAKNPGAVAAPTAGLHFDEVILQKLKDVGVNQATVTLHVGAGTFTPVREEDLSKHQM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T QA+ K GGRI++VGTTSLR LE+ SG TN+FITPG
Sbjct: 229 HYEWFSIPKETLQAIEKTKKNGGRIIAVGTTSLRALESQANS----QQSSGETNLFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+F+ VD L++NFHLPKSTLLMLVSAF G++ + YQHAI+ YRF+SYGD L +
Sbjct: 285 YQFKVVDCLLTNFHLPKSTLLMLVSAFAGVDNIRSAYQHAINQQYRFFSYGDAMFLCR 342
>gi|330830093|ref|YP_004393045.1| S-adenosylmethionine [Aeromonas veronii B565]
gi|328805229|gb|AEB50428.1| S-adenosylmethionine [Aeromonas veronii B565]
Length = 350
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 132/364 (36%), Positives = 201/364 (55%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + D+ LN D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPMAERTASRLLQLDGQTGA---LRHGQFVDVLDQLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERILDEHSVLAHVRASKAPKPGTRMIM--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+EA + + + + + + +G +PLPPYI RP + D Y
Sbjct: 110 --DGGVEAEMRARHDALFEIHFLDPRP--VLEILEAIGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 164 QTVYNQKPGAVAAPTAGLHFDEPLLEKIRAKGVETAFVTLHVGAGTFQPVRVDKIEDHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
HSE + A+ + ++RGGR+++VGTTS+R LE+A + + P+ T+IF
Sbjct: 224 HSEYAEVPQEVVDAIAATRARGGRVIAVGTTSVRSLESAAKVTLAQGKPLAPFFSDTDIF 283
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD +
Sbjct: 284 IFPGYQFQIVDAMVTNFHLPESTLIMLVSAFAGYDNVMAAYQAAVAGQYRFFSYGDAMFV 343
Query: 357 FQKR 360
+++
Sbjct: 344 TRRQ 347
>gi|227432397|ref|ZP_03914387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
gi|227351836|gb|EEJ42072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
Length = 377
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 200/357 (56%), Gaps = 13/357 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP + IA P+ RD++RL+ ++ D D+ +LN DAIV N
Sbjct: 33 LSDFDYDLPEALIAQTPLKQRDASRLLALNAKTGG---YEDEHFYDILDYLNPGDAIVMN 89
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L+G R L + + W +P+K G + F
Sbjct: 90 NSRVLPARLHGARP----ETGGHAEVLLLRQDHGDVWETLVKPAKKSPVGSTIVFGDDIE 145
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ATV+ + G + F GI + +G +PLPPYI K YQT
Sbjct: 146 NPIMTATVVGELEHGGRYIEFHYDGI-FMELLDQLGEMPLPPYIKEKLDDQ----ERYQT 200
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K+ GS AAPTAGLH+T LL R+ + G+K +TLHVG GTF PV E+ +DH MHS
Sbjct: 201 VYSKVDGSAAAPTAGLHWTPELLDRVRAKGVKTVELTLHVGLGTFRPVDEENIEDHKMHS 260
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LNSV+ GGRI++ GTTS+R LET T+ +G + SG+T+IFI PGY
Sbjct: 261 EFYQLSQEAADELNSVRKHGGRIIATGTTSIRTLETIGTKFNGDLTADSGWTDIFIKPGY 320
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ VD ++NFHLPKSTL+MLV+AF G + Y+HA+ YRF+S+GD + +
Sbjct: 321 NWTVVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYKHAVDDQYRFFSFGDAMFIHK 377
>gi|116333839|ref|YP_795366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus brevis ATCC 367]
gi|122269474|sp|Q03R37|QUEA_LACBA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116099186|gb|ABJ64335.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus brevis ATCC 367]
Length = 344
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 143/355 (40%), Positives = 208/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL+V+ + D D+ L++ DA+V N
Sbjct: 5 LDDFDYDLPHELIAQTPIKQRDTSRLLVLDHQ---ANTLEDKHFYDILDELHAGDAVVMN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L G++ + L V + W +P+K ++ G + F G
Sbjct: 62 NSRVMPARLYGIKP----ETGGHVEVLLLHNVEGDVWETLMKPAKRLRVGTTVTF----G 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L ATV ++ G L+ F GI + +G PLPPYI K YQT
Sbjct: 114 DGQLTATVTEEREDGIRLIEFHYDGI-FMEILEQLGETPLPPYIKEKLDD----PDRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLH+T LL ++ + G+K+ ++TLHVG GTF PV+ + +DH MHS
Sbjct: 169 VYAKENGSAAAPTAGLHWTQELLDQVAAKGVKLVYITLHVGLGTFRPVEEANIEDHKMHS 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E +D A LN V++ GGRI++ GTTS+R LET T+ G I P SG+T+IFI PGY
Sbjct: 229 EFYRLDEAAAATLNEVRANGGRIIATGTTSIRTLETIGTKFKGEIKPDSGWTDIFIKPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++ V+ ++NFHLPKSTL+MLV+AF G ++ Y HAI YRF+S+GD +
Sbjct: 289 QWQVVNAFITNFHLPKSTLVMLVAAFTGRDQILNAYHHAIEEKYRFFSFGDAMFI 343
>gi|59712577|ref|YP_205353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri ES114]
gi|75431538|sp|Q5E3D1|QUEA_VIBF1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|59480678|gb|AAW86465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri ES114]
Length = 350
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 209/363 (57%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ ++ N ++D +D+ + + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLQLNGNSG---ELNDGQFTDILDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G++ ++ + + +S + R SK K G +L
Sbjct: 58 FNNTRVIPARMFGMKAS-----GGKLEVLVERVLDEHSVLAHVRCSKSPKPGTMLLLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + + S ++ + +G +PLPPYI RP + D Y
Sbjct: 113 Q---EHEAEMVAR--HDTLFEIRFTSDKKVLDILDEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF + +L ++ + G++ +VTLHVGAGTF PV+V++ +H M
Sbjct: 166 QTVYNKKPGAVAAPTAGLHFDTEILEKMKAKGVEFAYVTLHVGAGTFQPVRVDNILEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN----PWSGFTNIF 296
HSE + A+N+ K+RGGR+VSVGTTS+R LE+A P+ T IF
Sbjct: 226 HSEYAEVSQEVIDAINATKARGGRVVSVGTTSVRSLESAAQHALKQGTELAPFFDDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD L++NFHLP+STL+MLVSAF G E T K Y+ A+++ YRF+SYGD +
Sbjct: 286 IYPGYEFQVVDALVTNFHLPESTLIMLVSAFAGYENTMKAYEQAVNNKYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TKK 348
>gi|75675988|ref|YP_318409.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
winogradskyi Nb-255]
gi|91207388|sp|Q3SRN4|QUEA_NITWN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|74420858|gb|ABA05057.1| Queuosine biosynthesis protein [Nitrobacter winogradskyi Nb-255]
Length = 360
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 193/363 (53%), Positives = 241/363 (66%), Gaps = 9/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PRDSAR++VV P + D VSDLP +L D +V
Sbjct: 1 MRTDLFDFELPAGSIALRPASPRDSARMLVVQPGSG----VRDQQVSDLPEWLRPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL+G R E I TL R+ + WS RP++ + GDI+ ++
Sbjct: 57 VNDTRVIAAQLHGRRI--GREAEPRIDATLIKRLDGSRWSALVRPARKLMAGDIVRLGNE 114
Query: 121 D---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V K GE+ FS G L++ I+ +G+ PLPPYIA KR D RD
Sbjct: 115 GRVCFLGHLDARVESKGEEGEVTFAFSFHGPMLDQAIAELGSTPLPPYIASKRAPDDRDA 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVKV+DT
Sbjct: 175 SDYQTMFATHEGAVAAPTAGLHFTPEIETALRGRGVGLHRITLHVGAGTFLPVKVDDTAG 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE G I TA ALN+ +SRGGRIV+VGTTSLRLLE+A +DG I P++G T IFI
Sbjct: 235 HRMHSEWGAISTETADALNAARSRGGRIVAVGTTSLRLLESAADDDGRIKPFTGETAIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+RFRAVDILM+NFHLP+STL MLVSAF G+E K+ Y HAIS YRFYSYGD LLF
Sbjct: 295 TPGHRFRAVDILMTNFHLPRSTLFMLVSAFSGLETMKQAYAHAISAGYRFYSYGDACLLF 354
Query: 358 QKR 360
+R
Sbjct: 355 PER 357
>gi|75910998|ref|YP_325294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Anabaena
variabilis ATCC 29413]
gi|91207412|sp|Q3M3N7|QUEA_ANAVT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|75704723|gb|ABA24399.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Anabaena
variabilis ATCC 29413]
Length = 408
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 152/382 (39%), Positives = 202/382 (52%), Gaps = 38/382 (9%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNL-SCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+D+ LPP RIA P PRDS+RL+VV+ + DLP L D ++ NNT
Sbjct: 30 YDYVLPPERIAQNPAVPRDSSRLLVVNSQTTGKETPPLHQIFRDLPDILRPGDLLIMNNT 89
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A+L G + E+ L N W +P K KKG + F ++
Sbjct: 90 KVIPARLYGRKSS-----GAEVEILLLEERKFNCWLALVKPGKRFKKGTQIIFEGLGIRN 144
Query: 125 -------------------------RLEATVID-KWNTGEILLVFSIS-GIELERQISLV 157
+L ATV++ TG LL F + G L + +
Sbjct: 145 LGIKNSPHYPLSPEGFPPSPVPNPHQLTATVLETDKATGGRLLQFDLPEGESLVQLLDKF 204
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
G IPLPPYI + D YQT YA+ G++AAPTAGLHFT LL +L I F
Sbjct: 205 GEIPLPPYITASQAAD----EQYQTVYAEQPGAIAAPTAGLHFTPELLEKLRDRNINQAF 260
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
+TLHVG GTF PV+VED H MH E I A T + + K+ GGRI++VGTT +R LE
Sbjct: 261 ITLHVGVGTFRPVEVEDVATHQMHEEWIEIPAATVAQIKATKAAGGRIIAVGTTVVRALE 320
Query: 278 TATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A G + + G TN+FI PGY+++ V+ L++NFHLP+S+LLMLVSA G E +Y
Sbjct: 321 GAAAS-GDLQEFCGKTNLFIYPGYKWQVVEGLITNFHLPRSSLLMLVSALIGRERLLNIY 379
Query: 338 QHAISHAYRFYSYGDTSLLFQK 359
Q AI+ YRFYS+GD L+ +
Sbjct: 380 QEAIASQYRFYSFGDAMLILPE 401
>gi|269926046|ref|YP_003322669.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermobaculum terrenum ATCC BAA-798]
gi|269789706|gb|ACZ41847.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermobaculum terrenum ATCC BAA-798]
Length = 336
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 144/359 (40%), Positives = 203/359 (56%), Gaps = 25/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LPP IA P PRDS+RL+V++ I + DLP +L+ D +V
Sbjct: 1 MRLQDFDYYLPPELIAQTPAEPRDSSRLLVLNKRTG---EIQHAIFRDLPNYLSPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G R + + L V W RP++ +K G+ +
Sbjct: 58 FNDTRVIPARLHGRR----KQTGGNVEFLLVRHVKDTEWEAMGRPARRLKTGERVTIAED 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A V++K G +L+ E+ + G IPLPPYI Y
Sbjct: 114 -----LDAQVLEKLPEGLLLIRLPQ---EVHENLDKYGEIPLPPYIHDFHGD----ASRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHFT L+SRL G+ + F+TLHVG GTF P+K E ++H M
Sbjct: 162 QTVYARDPGAVAAPTAGLHFTEELISRLRDYGVDLRFITLHVGPGTFQPIKTERIEEHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE +I + L +S G R+V+VGTTS+R LE A + G T++FI
Sbjct: 222 HSERYYIPEGLLEYLEEKRSAGNRVVAVGTTSVRALEDAAVRRQAGTWV----ETDLFIK 277
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ VD L++NFHLPKSTL+MLV+A G E Y+ A+ + YRFYS+GD L+
Sbjct: 278 PGYQFKIVDALITNFHLPKSTLMMLVAATGGYEHIMNAYRIAVENRYRFYSFGDAMLII 336
>gi|77460843|ref|YP_350350.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf0-1]
gi|91207396|sp|Q3K795|QUEA_PSEPF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77384846|gb|ABA76359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf0-1]
Length = 349
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRGSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDTHRVLAHVRSSKSPKPGSKI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A + G E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMLARHDALFELGFA--------EEVLPLLDRVGHMPLPPYI--DRPDEGSDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAEKLGAVAAPTAGLHFDQTLMEAISAKGVETAFVTLHVGAGTFQPVRVEKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + + RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRERGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y+ A+ + YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYKAAVDNGYRFFSYGDAMFITR 338
>gi|260890428|ref|ZP_05901691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia hofstadii F0254]
gi|260860048|gb|EEX74548.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia hofstadii F0254]
Length = 340
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 202/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA V PRD ++L+V++ + ++ +L +D +V
Sbjct: 1 MKISDFDFELPEELIAQHAVNPRDHSKLLVLNKKEKT---LEHKKFYNIIDYLKKDDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + + C L R +W V +P+K +K G L F
Sbjct: 58 INRTKVIPARLFGHKE-----NGVVLECFLLKRYDLYTWEVLLKPAKKLKIGQKLIFL-- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ LEA +++ G ++ F+ G E + +G +PLPPYI K Y
Sbjct: 111 --EGVLEAELMEIKEDGNRIIKFNFEGR-FEEILDKLGEMPLPPYIVEKLED----KNRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT+ LL ++ G+ + V L VG GTF PV+VE+ DH M
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTNELLGKIREKGVIITEVFLDVGLGTFRPVQVENVLDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T + +N K +G R+++VGTTS+R LE++ ++G + G TNIFI
Sbjct: 224 HSEKYRIPEETVKIINKAKEKGNRVIAVGTTSVRTLESSVDDNGKLIASEGDTNIFIYGD 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD +++NFHLPKSTL+ML+SAF G E + Y+ AI YRFYS+GD+ ++
Sbjct: 284 YNFKIVDAIITNFHLPKSTLIMLISAFGGKEFIFEAYKKAIEEKYRFYSFGDSMFIY 340
>gi|262048629|ref|ZP_06021512.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
D30]
gi|259163276|gb|EEW47835.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
D30]
Length = 341
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 206/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD + L+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSSLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|229105056|ref|ZP_04235708.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-28]
gi|228678366|gb|EEL32591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-28]
Length = 354
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|254491486|ref|ZP_05104665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophaga thiooxidans DMS010]
gi|224462964|gb|EEF79234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophaga thiooxydans DMS010]
Length = 347
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 139/358 (38%), Positives = 204/358 (56%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P R ++RL+ + N + D +DL L+S D +V
Sbjct: 1 MKTSDFRFDLPEELIAQYPSTDRTASRLLALDGNTG---QVQDLNFTDLLNQLDSKDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + ++ + + + R SK +G L
Sbjct: 58 FNNTKVIPARLLGHKE-----TGGKVEVLVERVLDHERVLAHVRSSKSPSQGRRLQL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ LE V+ + + + + ++ + + G +PLPPYI R +D D Y
Sbjct: 110 --EGSLEVEVLARHDA--LFELRFLNTDSVVDALESYGRMPLPPYIE--RDVDKADLERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL+++ +GI+ +TLHVGAGTF PV+V+D H M
Sbjct: 164 QTVYAQHVGAVAAPTAGLHFDQALLAQIKEMGIETAELTLHVGAGTFQPVRVDDIRSHQM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + Q + + ++RGGR+++VGTTS+R LE+A+ G I+P+ G T+IFI PG
Sbjct: 224 HSEVIEVSEQVCQQVKAARARGGRVIAVGTTSVRALESASQS-GEISPFEGETDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+F++VD +++NFHL +STLLMLVSAF YQHA+ YRF+SYGD + +
Sbjct: 283 YQFKSVDAMVTNFHLSESTLLMLVSAFASRSHILNAYQHAVEQRYRFFSYGDAMFITR 340
>gi|78485678|ref|YP_391603.1| S-adenosylmethionine [Thiomicrospira crunogena XCL-2]
gi|91207331|sp|Q31FZ4|QUEA_THICR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78363964|gb|ABB41929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thiomicrospira crunogena XCL-2]
Length = 351
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 139/362 (38%), Positives = 212/362 (58%), Gaps = 20/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+F+LP + IA +P R +RL+V++ +SD D+ +++N ND ++
Sbjct: 1 MRRQDFNFELPEALIAQQPAKERTQSRLLVMN----ADGSVSDCHFPDILSYVNENDCLI 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + ++ + + + R S K G L
Sbjct: 57 FNNTKVIPARLFGQKL-----TGGKVELLIERVLDERRVLTHIRSSNAPKSGAKLRI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELE--RQISLVGTIPLPPYIARKRPIDARDYV 178
+ +A V+ + + + EL I G +PLPPYI R+ ++
Sbjct: 109 --EEAFDAEVLGREGALFEVQLSKDEAPELTALELIEAHGHMPLPPYIEREDQLED--KE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y++ G+VAAPTAGLHF ++LL ++ + G FVTLHVGAGTF PV+V+D +H
Sbjct: 165 RYQTVYSEKPGAVAAPTAGLHFDNDLLDKIKAKGAAAGFVTLHVGAGTFKPVQVDDISEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIF 296
+MHSE+ + T + + + +GGR+++VGTTS+R LE+A + E+G + P+ G T+IF
Sbjct: 225 VMHSEVIEVLPETVELIKQTRQKGGRVIAVGTTSVRCLESAASFSENGELAPYQGETDIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY F+ VD+L++NFHLP+STL+MLVSA G + T + Y HA+ YRF+SYGD L+
Sbjct: 285 ITPGYDFKVVDVLLTNFHLPESTLIMLVSALAGYDRTMQAYAHAVEQKYRFFSYGDAMLV 344
Query: 357 FQ 358
Sbjct: 345 HP 346
>gi|303256878|ref|ZP_07342892.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderiales bacterium 1_1_47]
gi|302860369|gb|EFL83446.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderiales bacterium 1_1_47]
Length = 354
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 148/360 (41%), Positives = 198/360 (55%), Gaps = 17/360 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LP S IA P+ R ++RL+ V P+ S + D D+ L D +VF
Sbjct: 7 HLSDFDFELPESLIAQYPLKDRAASRLLHVKPDGS----VEDLHFRDILNLLKPGDLLVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+LNG + R SK K G IL+F +
Sbjct: 63 NNTKVIKARLNGKKE-----TGGVFEAMTERVTGTYEAISMMRASKAAKPGTILYFDHPE 117
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ A V+ + L F +E+ G +PLPPYI + D YQ
Sbjct: 118 GKEPARAEVLGREGEF-FRLRFDHPVLEVL---DEYGKVPLPPYIQHA--AEKSDESRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK G+VAAPTAGLHFT LL ++ G + FVTLHVGAGTF PV+VE+ +H+MH
Sbjct: 172 TVYAKYPGAVAAPTAGLHFTDELLQQIRDKGCEEVFVTLHVGAGTFQPVRVENLSEHVMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED--GIINPWSGFTNIFITP 299
SE I A+ +N K+ R+V VGTTSLR +E + +++ G + S T +FI P
Sbjct: 232 SEWYSISPEAAEKINKAKTERRRVVCVGTTSLRTVEASASQNPEGKVRAESADTRLFINP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ D +++NFHLPKSTL+MLVSA CG +E Y+HA+ YRF+SYGD L QK
Sbjct: 292 GYEFKVCDAMVTNFHLPKSTLVMLVSALCGRDEILSAYKHAVDEKYRFFSYGDACFLEQK 351
>gi|207721610|ref|YP_002252049.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Ralstonia
solanacearum MolK2]
gi|206586771|emb|CAQ17356.1| s-adenosylmethionine:trna ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Ralstonia solanacearum
MolK2]
Length = 362
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 203/356 (57%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ +H + + D +DL +L D +VFN
Sbjct: 10 LSDFDFDLPPELIAQTALPDRTASRLLAMHRD-APGTHFDDRQFADLVDYLRPGDLLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+ G + I + + ++ R SK G L
Sbjct: 69 DTRVIKARFFGHKAS-----GGRIEVLVERLLDEHTVLAQIRSSKSPVTGSRLLLADAFD 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L F +EL I G +PLPPYI D+ D YQT
Sbjct: 124 ------VTVGPRQEPFFTLRFPQPALEL---IEQYGRLPLPPYIEHT--PDSFDETRYQT 172
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H MHS
Sbjct: 173 VYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRMHS 232
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+ + ++ GGR+++VGTTS+R LE+A DG + SG T+IFITPGYR
Sbjct: 233 EWYAISPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLAAGSGETDIFITPGYR 292
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 293 FRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTR 348
>gi|113869066|ref|YP_727555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
eutropha H16]
gi|123133638|sp|Q0K734|QUEA_RALEH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113527842|emb|CAJ94187.1| queuosine biosynthesis protein [Ralstonia eutropha H16]
Length = 352
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 153/361 (42%), Positives = 210/361 (58%), Gaps = 19/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP----NLSCPLVISDHLVSDLPAFLNSNDA 58
+ +FDF LPP IA + R ++RL+VV + + + + D SD+ +L +D
Sbjct: 4 LSDFDFPLPPELIAQSALPDRSASRLLVVERLAPADTADAVRMVDRAFSDIVDYLRPDDL 63
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+T+VI A+ G + +I + V ++ R SK +G ILH
Sbjct: 64 LVFNDTRVIKARFFGHKPS-----GGKIEVLVERVVDSHTVLAQVRASKTPTEGSILHLA 118
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
A + L F ++L I G +PLPPYI + DA D
Sbjct: 119 DGAF-----AVTVGPRVDQFFTLRFPEPALDL---IERYGRLPLPPYI--RHDPDAYDET 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF L +RL + G++ F+TLHVGAGTF PV+ E+ +H
Sbjct: 169 RYQTVYARSPGAVAAPTAGLHFDDALFARLNAAGVRRAFLTLHVGAGTFQPVRTENLAEH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + A AQA+ ++RGGR+++VGTTSLR LE+A DG + SG T+IFIT
Sbjct: 229 KMHSEWYAVSADLAQAVRDTRARGGRVIAVGTTSLRALESAAQADGTLAAGSGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSA G+E + Y+HA+ YRF+SYGD LL +
Sbjct: 289 PGYRFRLVDALITNFHLPKSTLLMLVSALAGVEAIRAAYRHAVEQRYRFFSYGDAMLLTR 348
Query: 359 K 359
+
Sbjct: 349 Q 349
>gi|114046952|ref|YP_737502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. MR-7]
gi|122944787|sp|Q0HWR0|QUEA_SHESR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113888394|gb|ABI42445.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. MR-7]
Length = 345
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 203/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N ++D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LADKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG ++ LL S + + + VG +PLPPYI RP + D Y
Sbjct: 110 DGGYEMKMAARHDALFELELL----SDLTILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLEALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A +G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIVQTKAAGKRVVAVGTTSVRSLESAARASEGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQIVDAMITNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTKK 343
>gi|304440234|ref|ZP_07400124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371283|gb|EFM24899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 342
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 205/356 (57%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R S+RL++V+ N + + ++ +LN D +V
Sbjct: 3 LKTSDFYYDLPHELIAQHPLKDRASSRLLIVNRNSKD---LEECHFYNIIDYLNEGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G R +E++I L R ++W +P K K G + F
Sbjct: 60 VNNSRVIPARLFGHR----KDKEEKIEILLLKR-EEDTWQCLVKPGKKAKVGSEIIFSD- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L+ V G + F GI E + +G +PLPPYI K Y
Sbjct: 114 ----KLKCEVKRVDEEGNRYIKFHCDGI-FEEILDELGNMPLPPYITEKLED----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT +LL R+ GIKV +TLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYSKIDGSAAAPTAGLHFTEDLLDRIKEKGIKVVPITLHVGLGTFRPVKVDDVEKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K G RI++VGTTS+R LET +G + SG+T+IFI PG
Sbjct: 225 HSEFYMMDKETAKIINDAKENGKRIIAVGTTSMRTLETIGR-NGRVKETSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ VD L++NFHLP+STL+MLVSAF + Y++AI + +RF+S+GD +
Sbjct: 284 FEFKIVDALITNFHLPESTLMMLVSAFASKDIIFNAYEYAIKNKFRFFSFGDAMFI 339
>gi|172035354|ref|YP_001801855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. ATCC 51142]
gi|171696808|gb|ACB49789.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. ATCC 51142]
Length = 361
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 143/367 (38%), Positives = 201/367 (54%), Gaps = 24/367 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+DLPP IA P+ PRD +RL+V++ P + DLP +L D +VF
Sbjct: 6 LLSSYDYDLPPELIAQNPMIPRDHSRLLVIN----SPTTHIHSVFRDLPKWLLPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L P W +P K K G +HF
Sbjct: 62 NNTRVIPARLYGKK-----TTGAPVEILLLEEKEPFCWLALVKPGKRFKIGSEIHFPLDH 116
Query: 122 GQSR----LEATVIDK-WNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDAR 175
+ L ATV+D+ TG LL F++ ++ ++I +G IP PPY+ ++
Sbjct: 117 NDDKEDMFLAATVLDRDEETGGRLLKFNVDSLDLFWKKIEEIGQIPFPPYVTESEADSSQ 176
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YA+ G+VAAPTAGLHFT LL L I ++TLHVG GTF PV +E+
Sbjct: 177 ----YQTIYAQKPGAVAAPTAGLHFTDELLDNLQHKRINQAYITLHVGLGTFRPVDMENI 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-----NPWS 290
+H MH E + T + + K+ GGR+++VGTT +R LE A + +
Sbjct: 233 KEHKMHQEWIEVPDVTVEKIKETKANGGRVIAVGTTVVRALEGAAKAAEMEGKKDLKAFR 292
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PGY +R +D +++NFHLPKS+LLMLVSA G E +YQ AI YRFYS+
Sbjct: 293 GKTDIFIYPGYSWRVIDGMITNFHLPKSSLLMLVSALIGRERLLDLYQIAIKEKYRFYSF 352
Query: 351 GDTSLLF 357
GD L+
Sbjct: 353 GDGMLIL 359
>gi|126658466|ref|ZP_01729614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. CCY0110]
gi|126620208|gb|EAZ90929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. CCY0110]
Length = 360
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 142/367 (38%), Positives = 205/367 (55%), Gaps = 24/367 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LPP IA P+ PRD +RL+V++ + + DLP +L+ D +VF
Sbjct: 6 LLSSYDYYLPPELIAQNPMTPRDESRLLVIN----SLRTHTHSIFRDLPEWLSPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L P W +P K K G ++F+ +
Sbjct: 62 NNTRVIPARLYGKKA-----TGAPVEILLLEEKEPLCWLALVKPGKRFKIGSEIYFYLDN 116
Query: 122 GQSR----LEATVIDK-WNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDAR 175
L ATV+D+ TG LL F ++ ++ ++I +G IP PPY+ + ++
Sbjct: 117 NDCSQDNFLVATVVDRDEETGGRLLKFKVNSLDVFWKKIEELGQIPFPPYVTESKAAPSQ 176
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YA+ G+VAAPTAGLHFT LL L GI ++TLHVG GTF PV +E+
Sbjct: 177 ----YQTIYAQKPGAVAAPTAGLHFTDKLLENLQQKGINQAYITLHVGLGTFRPVDIENI 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWS 290
+H MH E + T + + K+ GGR+++VGTT +R LE A + P+
Sbjct: 233 KEHKMHQEWIELPEITVEKIKETKANGGRVIAVGTTVVRTLEGAAKAAEMEGKQGLIPYR 292
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T+IFI PGY +R +D L++NFHLPKS+LLMLVSA G E ++YQ AI YRFYS+
Sbjct: 293 DKTDIFIYPGYSWRVIDGLITNFHLPKSSLLMLVSALIGRERLLELYQIAIEEKYRFYSF 352
Query: 351 GDTSLLF 357
GD L+
Sbjct: 353 GDGMLIL 359
>gi|254804318|ref|YP_003082539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha14]
gi|254667860|emb|CBA03913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha14]
Length = 356
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 208/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLSFEGGETVYELLEQNGHLPLPPYIE--RAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 293 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGR 350
>gi|197335931|ref|YP_002156798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri MJ11]
gi|226713855|sp|B5F9Y4|QUEA_VIBFM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197317421|gb|ACH66868.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri MJ11]
Length = 350
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 209/363 (57%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ ++ N ++D +D+ + + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLQLNGNSG---ELNDGQFTDILDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G++ ++ + + +S + R SK K G +L
Sbjct: 58 FNNTRVIPARMFGMKAS-----GGKLEVLVERVLDEHSVLAHVRCSKSPKPGTMLLLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + + S ++ + +G +PLPPYI RP + D Y
Sbjct: 113 Q---EHEAEMVAR--HDTLFEIRFTSDKKVLDILDEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF + +L ++ + G++ +VTLHVGAGTF PV+V++ +H M
Sbjct: 166 QTVYNKKPGAVAAPTAGLHFDTEILEKMKAKGVEFAYVTLHVGAGTFQPVRVDNILEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN----PWSGFTNIF 296
HSE + A+N+ K+RGGR+VSVGTTS+R LE+A P+ T IF
Sbjct: 226 HSEYAEVSQEVIDAINATKARGGRVVSVGTTSVRSLESAAQHALKQGTELAPFFDDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD L++NFHLP+STL+MLVSAF G + T K Y+ A+++ YRF+SYGD +
Sbjct: 286 IYPGYEFQVVDALVTNFHLPESTLIMLVSAFAGYDNTMKAYEQAVNNKYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TKK 348
>gi|88799557|ref|ZP_01115133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Reinekea
sp. MED297]
gi|88777642|gb|EAR08841.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Reinekea
sp. MED297]
Length = 353
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 142/358 (39%), Positives = 202/358 (56%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA P R +RL+ +H + + D+ + D +V
Sbjct: 1 MHVNDFDFQLPDELIARHPAEQRTGSRLLHLHGDSG---QVQHRHFPDIEQLIEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + S ++ + + +K K G L
Sbjct: 58 FNNTRVIPARLFGQKRS-----GGKVELLIERMTSDHTALAHIKANKSPKAGTELIM--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G +LE T D + V + L + G +PLPPY+ R+ D R+ Y
Sbjct: 110 EGDIQLEVTGRD----QNLFCVRCTNPEPLVDLLDQHGHMPLPPYLEREDDDDDRER--Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHF LL+RL G+ FVTLHVGAGTF PVK ++ DH+M
Sbjct: 164 QTVYAQRKGAVAAPTAGLHFDDALLARLKDKGVNTAFVTLHVGAGTFQPVKADNIKDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + + + K+ G R+++VGTTS+R LETA+ G I P++G TNIFI PG
Sbjct: 224 HAEWIDVPDSVVEQIRTTKAAGKRVIAVGTTSVRSLETASQS-GQIEPFTGDTNIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF+ VD L++NFHLPKSTL+ML+SAF G + Y+ AI YRF+SYGD + +
Sbjct: 283 YRFKTVDALLTNFHLPKSTLIMLISAFAGKDHVMAAYEAAIRERYRFFSYGDAMFVTR 340
>gi|260433384|ref|ZP_05787355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter lacuscaerulensis ITI-1157]
gi|260417212|gb|EEX10471.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter lacuscaerulensis ITI-1157]
Length = 348
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 161/360 (44%), Positives = 219/360 (60%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D V +LP +L D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPANPRTSARLLVAQGDD-----IADDRVFNLPDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R + + I TL + +W+ +P K ++ G+ + F
Sbjct: 56 LNDTRVIPARLSGRRHRNSAQGPVSAAIEATLLDPQADGTWAALLKPLKKVRVGEEIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ V+++ G+ L F+++G + +R + G +PLPPYIA KRP D RD
Sbjct: 116 GD------LSAVLERVAEGQAYLRFNLTGEDFDRALEQAGAMPLPPYIAAKRPADERDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L G++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARHSGAVAAPTASLHFDEALLKTLTERGVEFTHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI
Sbjct: 230 KMHAEWGRVSPQAAAEIAATKAAGGRVIPVGTTALRLIESAAR-GGRIEPWEGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTLLMLVSA G + ++Y HAI+ YRF+SYGD SLL
Sbjct: 289 PGFTFHVTDALMTNFHLPKSTLLMLVSALMGKDRMLRIYDHAIACRYRFFSYGDASLLIP 348
>gi|312866079|ref|ZP_07726300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus downei F0415]
gi|311098483|gb|EFQ56706.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus downei F0415]
Length = 342
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+F LP IA P+ RDS++L+V+ N + D + LN DA+V
Sbjct: 1 MNTEDFNFHLPEDLIAQTPLEKRDSSKLLVIDHNK---HTMLDSHFDHILEELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G + + L + W V A+P+K + G + F
Sbjct: 58 MNNTRVLPARLHGEKP----ETHGHVEFLLLKNTQGDQWEVLAKPAKRLHVGTEVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLRATVLEELEHGGRIVQFHYEGI-FLEVLESLGEMPLPPYIHEKLEDQ----EHY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE AQ L VK+ GGRIV+VGTTS+R LET + +G I SG+TNIFI P
Sbjct: 225 HSEFYQFSEEAAQTLRQVKASGGRIVAVGTTSIRTLETIGNKFNGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKLVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAVEEHYRFFSFGDAMFV 341
>gi|258424065|ref|ZP_05686947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9635]
gi|257845686|gb|EEV69718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9635]
Length = 347
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 8 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLDD----PDRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETANLLNDTKSKGHRIISVGTTSTRTLETIRRDYDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 347
>gi|254481740|ref|ZP_05094983.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2148]
gi|214037869|gb|EEB78533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2148]
Length = 352
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 211/356 (59%), Gaps = 11/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F + LP +A P+ R +RL+ + + ++ +D P L S+D +V
Sbjct: 1 MKRTDFSYHLPEELVAQYPLPERSDSRLLCLDGSDGA---MAHRNFTDFPGLLTSDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + +S + R SK + G + +
Sbjct: 58 FNNTRVIPARLWGQKE-----TGGKLEILIERVTGTHSALAHIRCSKSPRPGTRILLAER 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G S + + G + ++ S SG+ L + +G +PLPPYI R + D Y
Sbjct: 113 EGASPGDYRLEVTGREGALFMLSSESGLPLTDIMRDIGHMPLPPYI--ARQDEEADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +LL ++ + ++ VTLHVGAGTF PV+ ++ DHIM
Sbjct: 171 QTVFAEREGAVAAPTAGLHFTDDLLRQIAELDVRTAKVTLHVGAGTFQPVREDNILDHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A++ ++RGGR+V+VGTT++R LE+A+T G I P+ G T+IFI PG
Sbjct: 231 HSEFVEVGEDVCAAVSDARARGGRVVAVGTTAVRSLESASTT-GEIRPFVGDTDIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+FR+VD +++NFHLP+STLLMLVSAF G E Y+ A++ +YRF+SYGD L
Sbjct: 290 YQFRSVDAMVTNFHLPESTLLMLVSAFAGKEHIMNAYEEAVARSYRFFSYGDAMFL 345
>gi|239809481|gb|ACS26207.1| unknown [uncultured bacterium]
Length = 349
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP + IA P+ R ++RL+V+ +S +DL + D +V
Sbjct: 1 MQVADFFFQLPDALIARHPLAERRASRLLVLEGETG---KLSHRNFADLLDHVRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + V S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKA-----TGGKLEILVERVVGNRSVLAHVRSSKSPKAGSKI-LLDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++++ A L ++ + +G +PLPPYI RP DA D Y
Sbjct: 112 GGEAKMIARHDA--------LFELEFDEDVLPLLERIGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL L G++ +VTLHVGAGTF PV+VE ++H M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLQMLRESGVETAYVTLHVGAGTFQPVRVERIEEHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + +SRGGR+++VGTTS+R LETA DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVAACRSRGGRVIAVGTTSVRSLETAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 KSFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAEAVAQRYRFFSYGDAMFITR 338
>gi|16272205|ref|NP_438415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae Rd KW20]
gi|260580871|ref|ZP_05848696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae RdAW]
gi|1172814|sp|P44595|QUEA_HAEIN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|1573210|gb|AAC21912.1| queuosine biosynthesis protein (queA) [Haemophilus influenzae Rd
KW20]
gi|260092494|gb|EEW76432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae RdAW]
Length = 363
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 199/365 (54%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ K G + + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHGALFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVKEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|291566847|dbj|BAI89119.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthrospira
platensis NIES-39]
Length = 441
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 158/366 (43%), Positives = 199/366 (54%), Gaps = 26/366 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ NNT+
Sbjct: 84 YDYELPPDRIAQNPVIPRDSSRLLVVD----SPQSHQHRLFRDLPDLLQPQDLLILNNTR 139
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L G + I L +PN W +P K K GD L F S+ G
Sbjct: 140 VLPARLYGRKSRS-----AAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFQSKSGGEI 194
Query: 126 LEATVID-KWNTGEILLVFS-ISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L ATVID +TG LL F G L + G IP PPY+ YQT
Sbjct: 195 LYATVIDTNPSTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVT----DSQALAEQYQTI 250
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
Y G+VAAPTAGLHFT L RL I FVTLHVG GTF PV+VED H MH+E
Sbjct: 251 YGDRPGAVAAPTAGLHFTEQLFQRLSQQHIDHAFVTLHVGLGTFRPVEVEDITTHQMHAE 310
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGII--NPWSGFTNIFITP 299
+ T + +N ++RGGRI++VGTT +R LE A G P+ G N+FI P
Sbjct: 311 WVELPPETVEKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSGDRSIQPYCGEINLFIYP 370
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-------HAYRFYSYGD 352
GYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ + YRFYS+GD
Sbjct: 371 GYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYSFGD 430
Query: 353 TSLLFQ 358
L+
Sbjct: 431 AMLILP 436
>gi|85373945|ref|YP_458007.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Erythrobacter litoralis HTCC2594]
gi|122544578|sp|Q2NAT1|QUEA_ERYLH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|84787028|gb|ABC63210.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter
litoralis HTCC2594]
Length = 347
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 188/359 (52%), Positives = 232/359 (64%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PRDSARL+V + I D +V DLP L D +V
Sbjct: 1 MRVDLFDFELPQELIALRPAVPRDSARLLVA----AGAGAIDDRIVRDLPQLLMPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E + TLH R+ W + R +K + GD + F +
Sbjct: 57 FNDTRVIPAQLTGKR------GEATVGVTLHKRLDLRRWQAFVRNAKRLAPGDTVDFGND 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V D+ + G F +E + GT+PLPPYIA KR D RD DY
Sbjct: 111 -----VSADVEDRADDGSFTFAF-RGDEPVEVLLDRAGTMPLPPYIAGKRATDERDRDDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFTS L++ L G+ +TLHVGAGTF+PVK +DTDDH M
Sbjct: 165 QTMFAREDGAVAAPTAALHFTSELIAALDERGVARQTLTLHVGAGTFLPVKADDTDDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I+ TA LN+ KSRGGRI++VGTTSLRLLE+AT EDG+I ++G T+IFITPG
Sbjct: 225 HSEWGRIEHDTADRLNAAKSRGGRIIAVGTTSLRLLESATGEDGVIRTFAGDTDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFRAVD LM+NFHLPKSTL+MLVSA G E +Y HAI+ YRFYSYGD+SLL +
Sbjct: 285 YRFRAVDGLMTNFHLPKSTLMMLVSALMGRERMMDIYAHAIAQRYRFYSYGDSSLLIPE 343
>gi|225868906|ref|YP_002744854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. zooepidemicus]
gi|225702182|emb|CAW99893.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. zooepidemicus]
Length = 342
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD ++L+++ ++D + L DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDRSKLLIIDHQ---EHTMTDSHFDHIIDQLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKM----ETHGHVELLLLKNIQGDQWEVLAKPAKRLKAGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI + G ++ FS GI + +G +PLPPYI K Y
Sbjct: 111 -GDGLLKARVIQELEHGGRIVEFSYDGI-FLEILETLGEMPLPPYIHEKLAD----AERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNIDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGRIV+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYLLSEEAAQTLRKVKAAGGRIVAVGTTSIRTLETIGSKFQGQILADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAIDEHYRFFSFGDAMFV 341
>gi|92117315|ref|YP_577044.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
hamburgensis X14]
gi|91800209|gb|ABE62584.1| Queuosine biosynthesis protein [Nitrobacter hamburgensis X14]
Length = 365
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 191/361 (52%), Positives = 239/361 (66%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PRDSAR++VV P + D VSDLP +L D +V
Sbjct: 6 MRTDLFDFELPSESIALRPASPRDSARMLVVQPGAG----LHDQRVSDLPKWLRPGDQLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E I TL R+ + W+ +P++ + GDI+ F ++
Sbjct: 62 VNDTRVIAAQLRGRRI--GRDAEPRIEATLIKRLDGSRWNALVKPARKLIAGDIVRFGNE 119
Query: 121 D---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V K GE+ FS G L++ I+ +G+ PLPPYIA KR D RD
Sbjct: 120 GRVCFLGHLDAQVESKGEEGEVTFAFSFHGPTLDQAIADLGSPPLPPYIASKREPDDRDV 179
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 180 ADYQTMFAVHEGAVAAPTAGLHFTPAVEAVLRERGVGLHRLTLHVGAGTFLPVKTEDTVG 239
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE G I A TA ALN+ ++ GGRIV+VGTTSLRLLE+AT +DG I P++G T IFI
Sbjct: 240 HRMHSEWGTISAETADALNAARASGGRIVAVGTTSLRLLESATADDGRIAPFTGETAIFI 299
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVDILM+NFHLP+STL MLVSAF G+E K+ Y HAI+ YRFYSYGD LLF
Sbjct: 300 TPGYRFRAVDILMTNFHLPRSTLFMLVSAFSGLETMKQAYAHAIAAGYRFYSYGDACLLF 359
Query: 358 Q 358
Sbjct: 360 P 360
>gi|127513266|ref|YP_001094463.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
loihica PV-4]
gi|166216753|sp|A3QFF6|QUEA_SHELP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126638561|gb|ABO24204.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
loihica PV-4]
Length = 345
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 206/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMPNRTASRLLTLDGNSGA---VADKQFTDILEMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + + ++ + + + R SK K G I+
Sbjct: 58 FNNTRVIPARVFGQK-----QTGGKLEILVERMLDDKRILAHVRSSKSPKPGTIICL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E T++ + +T L + S + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYEMTMLARHDTLFELELNS--ESTILEVLEEVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL+ L G+ V FVTLHVGAGTF PV+V+ DH M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDALLAALKEKGVNVAFVTLHVGAGTFQPVRVDSILDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + ++ + K+ G R+++VGTTS+R LE+A +G + +S T+IFI P
Sbjct: 224 HSEWAEVPQDVVDSIKATKAAGNRVIAVGTTSVRSLESAAKASEGELQAYSNDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYEFQVVDAMVTNFHLPESTLIMLISAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|269837349|ref|YP_003319577.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sphaerobacter thermophilus DSM 20745]
gi|269786612|gb|ACZ38755.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sphaerobacter thermophilus DSM 20745]
Length = 341
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 142/354 (40%), Positives = 206/354 (58%), Gaps = 16/354 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+DLPP IA PV PRD++RLMVV I+ DLP+ L+ D ++ N+T
Sbjct: 3 DYDYDLPPELIAQHPVEPRDASRLMVVDR---ASETIAHRRFRDLPSLLSPGDLLIVNDT 59
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A+L+G R ++ L R+ W RP++ ++ G +H Q G+
Sbjct: 60 RVMPARLHGRR-----PTGGQVELLLLRRLEDGCWEAMGRPARRLRPGTFVHLRDQGGRE 114
Query: 125 RLE-ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
+E A V+ + G L+ E+E ++ G +PLPPYI D YQT
Sbjct: 115 AVEPAEVVARRGEG---LLAVRLPSEVEARLDEFGEMPLPPYI----RARLEDPERYQTV 167
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A GS AAPTAGLHFT LL+ L + GI+ +TLHVG GTF+PVKVED H MH E
Sbjct: 168 FATEVGSAAAPTAGLHFTPRLLAELDAAGIRRATITLHVGLGTFLPVKVEDARQHRMHQE 227
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ A T A+ ++ G R+V+VGTT+ R LE+ + + SG+T++FI PG++F
Sbjct: 228 WYHVPADTLAAIRETRAAGRRVVAVGTTACRTLESIAPDLDADDDLSGWTDLFIVPGHQF 287
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ VD L++NFHLP+STLL+LVSAF G E + Y+ A+ YRF+S+GD L+
Sbjct: 288 QVVDALVTNFHLPRSTLLLLVSAFAGRELILRAYEEAVRTRYRFFSFGDAMLIL 341
>gi|156973358|ref|YP_001444265.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
harveyi ATCC BAA-1116]
gi|166218756|sp|A7MT82|QUEA_VIBHB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|156524952|gb|ABU70038.1| hypothetical protein VIBHAR_01045 [Vibrio harveyi ATCC BAA-1116]
Length = 350
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 144/363 (39%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D SD+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFSDVLEQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + ++ S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKLEVLVERMLNEKSILAHVRCSKSPKPGTTILVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D S D + S + + +G +PLPPYI RP + D Y
Sbjct: 113 DEYSAQMVARHDALFE-----LKFNSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D DDH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLEKITAKGAEFAYVTLHVGAGTFQPVKVDDIDDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQDVVDAINATKARGGRVVAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|113969723|ref|YP_733516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. MR-4]
gi|123130559|sp|Q0HKF8|QUEA_SHESM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113884407|gb|ABI38459.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. MR-4]
Length = 345
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 203/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N ++D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LADKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG ++ LL S + + + VG +PLPPYI RP + D Y
Sbjct: 110 DGGYEMKMAARHDALFELELL----SDLTILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A +G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASEGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQIVDAMITNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTKK 343
>gi|325204815|gb|ADZ00269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M01-240355]
Length = 346
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DL ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLQDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGR 340
>gi|153835756|ref|ZP_01988423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
harveyi HY01]
gi|148867570|gb|EDL66888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
harveyi HY01]
Length = 350
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 143/363 (39%), Positives = 202/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLEQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTILVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D S D + S + + +G +PLPPYI RP + D Y
Sbjct: 113 DEYSAQMVARHDALFE-----LKFNSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRIV+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQDVVDAINATKARGGRIVAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|261393199|emb|CAX50818.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein QueA) [Neisseria meningitidis 8013]
Length = 346
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DL ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLSDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGR 340
>gi|37678929|ref|NP_933538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus YJ016]
gi|320157295|ref|YP_004189674.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus MO6-24/O]
gi|46576906|sp|Q7MNH2|QUEA_VIBVY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|37197671|dbj|BAC93509.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase [Vibrio
vulnificus YJ016]
gi|319932607|gb|ADV87471.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus MO6-24/O]
Length = 350
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 137/363 (37%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N + D D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQSERTASRLLQLNGNTGA---VKDGSFKDVLELVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + + R SK K G ++ +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKRFLAHVRSSKSPKPGTLVFLGEE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D S D + + + + +G +PLPPYI RP + D Y
Sbjct: 113 DQYSAEMVARQDALFE-----LHLKADKTILEVLEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF + LL ++ + G + +VTLHVGAGTF PVKV++ +H M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDNQLLEQIKAKGAEFAYVTLHVGAGTFQPVKVDNILEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII----NPWSGFTNIF 296
HSE + A+ + K+RGGR+++VGTTS+R LE+A E P+ G T IF
Sbjct: 226 HSEYAEVPQEVVDAIKATKARGGRVIAVGTTSVRSLESAAQESLKNGTELMPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G + T YQHA+++ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYDHTMNAYQHAVANQYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 EKK 348
>gi|117919882|ref|YP_869074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. ANA-3]
gi|166217771|sp|A0KV49|QUEA_SHESA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|117612214|gb|ABK47668.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. ANA-3]
Length = 345
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 203/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N ++D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LADKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG ++ LL S + + + VG +PLPPYI RP + D Y
Sbjct: 110 DGGYEMKMAARYDALFELELL----SDLTILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A +G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASEGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQIVDAMITNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTKK 343
>gi|94311875|ref|YP_585085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
metallidurans CH34]
gi|166216742|sp|Q1LJ60|QUEA_RALME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|93355727|gb|ABF09816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
metallidurans CH34]
Length = 353
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 154/361 (42%), Positives = 207/361 (57%), Gaps = 19/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP----NLSCPLVISDHLVSDLPAFLNSNDA 58
+ +FDF LPP IA + R ++RL+VV + S + + D SD+ +LN +D
Sbjct: 4 LSDFDFPLPPELIAQSALPDRSASRLLVVERTAPEDTSEAVRLVDRAFSDILEYLNPDDL 63
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+T+VI A+ G + I + V ++ R SK +G +LH
Sbjct: 64 LVFNDTRVIKARFFGHKPS-----GGRIEVLVERVVDTHTVLAQVRASKTPVEGSLLHLA 118
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
A + L F ++L I G +PLPPYI DA D
Sbjct: 119 DDAF-----AVTVGPRVDQFFTLRFPEPALDL---IERYGRLPLPPYITHD--PDAYDET 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF L +RL + GI+ F+TLHVGAGTF PV+ E+ +H
Sbjct: 169 RYQTVYARNPGAVAAPTAGLHFDDALFARLDAAGIRRAFLTLHVGAGTFQPVRTENLSEH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I A A+ ++RGGR+++VGTTSLR LE+A EDG + SG T+IFIT
Sbjct: 229 KMHSEWYAISPELADAVRETRARGGRVIAVGTTSLRALESAAAEDGTLEAGSGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY FR VD L++NFHLPKSTLLMLVSA G+E + Y+HA+ YRF+SYGD LL +
Sbjct: 289 PGYAFRIVDALITNFHLPKSTLLMLVSALAGVEAIRDAYRHAVDARYRFFSYGDAMLLTR 348
Query: 359 K 359
+
Sbjct: 349 R 349
>gi|315127835|ref|YP_004069838.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas sp. SM9913]
gi|315016349|gb|ADT69687.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas sp. SM9913]
Length = 343
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 202/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ ++ I + SD+ +N ND +V
Sbjct: 1 MRVADFSFDLPDELIARFPKADRTSSRLLSLNGPTG---EIEHKIFSDILELVNENDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A++ G + ++ + + + + R SK K G++L
Sbjct: 58 FNNTKVIPARMFGQKES-----GGKVEVLVERVLDEHRVLAHIRASKSPKPGNVLILEG- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+A I + + + ++ VG +PLPPYI RP + D Y
Sbjct: 112 ------KAKAIMVARHDTLFELEFDRSENVLDILNDVGHMPLPPYI--DRPDNEADRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ L G+++ FVTLHVGAGTF PV+VE D+HIM
Sbjct: 164 QTVYGEKPGAVAAPTAGLHFDDKLMAALKDKGVQMAFVTLHVGAGTFQPVRVESVDEHIM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + A+ S K++GGR++++GTTS+R LE+A G ++ + G T+IFI P
Sbjct: 224 HSEYIEVPQDVVDAVASTKAKGGRVIAIGTTSVRSLESAAKIHGGKLDTYFGDTDIFIFP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +++NFHLP+STL+MLVSAF G + Y AI YRF+SYGD L +K
Sbjct: 284 GYQFNVVDAMVTNFHLPESTLIMLVSAFAGQDNIMGAYNTAIEQQYRFFSYGDAMFLTRK 343
>gi|256819029|ref|YP_003140308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga ochracea DSM 7271]
gi|256580612|gb|ACU91747.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Capnocytophaga ochracea DSM 7271]
Length = 349
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 200/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMV+H I L D+ + + D V
Sbjct: 1 MKLSNFNFELPKELLAEYPSENRDEARLMVIHRKTG---EIEHRLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + + +I L + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTKAKIEVFLLRELSAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E + ++ +G PLP YI RP++ D
Sbjct: 114 K---NAELVAEVIDNTTSRGRTLRFLYDGTYEEFRQHLTELGQTPLPKYI--SRPVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF PV+VED
Sbjct: 169 EERYQTIYAKYEGAVAAPTAGLHFSKHLMKRLEIKGITFSEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I + +N+ K R+ +VGTT +R+LE++ + DG +NP+ G+TN F
Sbjct: 229 KHKMDSEEIHIPESQTKIINAAKVNKKRVCAVGTTVMRVLESSVSSDGFLNPFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANAMITNFHTPKSTLLMMVSAFAGHDLIMRAYKEAVEQKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|148827384|ref|YP_001292137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittGG]
gi|166216725|sp|A5UG48|QUEA_HAEIG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148718626|gb|ABQ99753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittGG]
Length = 363
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 202/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|269962429|ref|ZP_06176779.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
harveyi 1DA3]
gi|269832925|gb|EEZ87034.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
harveyi 1DA3]
Length = 350
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 202/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLEQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTILVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D S D + + + + +G +PLPPYI RP + D Y
Sbjct: 113 DEYSAQMVARHDALFE-----LKFNADKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRIV+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQDVVDAINATKARGGRIVAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|256545114|ref|ZP_05472480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus vaginalis ATCC 51170]
gi|256399155|gb|EEU12766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus vaginalis ATCC 51170]
Length = 340
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 191/356 (53%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD++LP IA P RD +RLMVV D D+ +LN D +V
Sbjct: 1 MRTEDFDYNLPEELIAQHPADKRDFSRLMVVDRKTGQR---EDKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R L + + W V RP K +K G F +
Sbjct: 58 MNDTRVIPARLFGHREEKEEEI----EVFLLENIEDDKWEVLVRPGKKMKIGTKCIFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VID G ++ F GI + + +G +PLPPYI K Y
Sbjct: 114 -----LSLEVIDIKEDGNRVIEFFYDGI-FQEILDRLGNMPLPPYIKEKLKD----KERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ ++TL+VG GTF PVKV+D +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEEKGVKLAYITLNVGLGTFRPVKVDDVKNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K RI+S GTT+ R LE+ ++G I SG+T+IFI PG
Sbjct: 224 HSEFYQISKETADLINETKKNNKRIISTGTTTTRTLESVYKKNGQIKEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F +D ++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 284 FEFNVIDCQITNFHLPKSTLIMLVSALASKEIILDAYKDAVDKKYRFFSFGDAMFL 339
>gi|330719270|ref|ZP_08313870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
fallax KCTC 3537]
Length = 352
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 205/357 (57%), Gaps = 13/357 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP + IA P+ RD++RL+ ++ D D+ ++ + DAIV N
Sbjct: 8 LSDFDYDLPEALIAQTPLKQRDASRLLALNAISG---EYEDRHFYDILDYVKAGDAIVMN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L+G R L + + W V +P+K G + F
Sbjct: 65 NSRVLPARLHGARP----ETGGHAEVLLLRQDHGDVWEVLMKPAKKSPIGSEVVFGDDMQ 120
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ATV++ G ++ F GI + +G +PLPPYI K YQT
Sbjct: 121 HPIMTATVLEDLEHGGKMIEFHYDGI-FMELLDKLGEMPLPPYIKEKLADQ----ERYQT 175
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K+ GS AAPTAGLH+T LL ++ + G+K +TLHVG GTF PV+ E+ +DH MHS
Sbjct: 176 VYSKVDGSAAAPTAGLHWTPELLDKVRAKGVKTVELTLHVGLGTFRPVEEENIEDHKMHS 235
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A AQ LN V+ GGRI++ GTTS+R LET ++ G + SG+T+IFI PGY
Sbjct: 236 EFYQLTADAAQDLNEVRQNGGRIIATGTTSIRTLETIGSKFSGELKADSGWTDIFIKPGY 295
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++ VD ++NFHLPKSTL+MLV+AF G E Y HA++ YRF+S+GD +++
Sbjct: 296 QWTVVDAFITNFHLPKSTLVMLVAAFTGREHIMNAYHHAVAQQYRFFSFGDAMFIYK 352
>gi|85716503|ref|ZP_01047474.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
sp. Nb-311A]
gi|85696692|gb|EAQ34579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
sp. Nb-311A]
Length = 371
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 194/363 (53%), Positives = 242/363 (66%), Gaps = 9/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PR+SAR++VVHP + D VSDLP +L D +V
Sbjct: 12 MRTDLFDFELPAESIALRPASPRNSARMLVVHPGTR----LHDQRVSDLPEWLRPGDQLV 67
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL+G R E I TL R+ + WS RP+K + GD++ F +
Sbjct: 68 VNDTRVIAAQLHGRRI--GREAEPRIDATLIKRLDGSRWSALVRPAKKLVAGDVVRFGND 125
Query: 121 D---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V K GE+ FS G L+R I+ +G+ PLPPYIA KR D +D
Sbjct: 126 GRVCFLGHLDAQVESKGEEGEVTFAFSFHGPTLDRAIAELGSTPLPPYIASKRAPDDQDA 185
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 186 ADYQTMFAAHEGAVAAPTAGLHFTPVIETALRERGVGLHRITLHVGAGTFLPVKAEDTAG 245
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE G I A TA ALN+ +SRGGRIV+VGTTSLRLLE+A EDG I P++G T IFI
Sbjct: 246 HRMHSEWGTISAETADALNTARSRGGRIVAVGTTSLRLLESAAAEDGRIAPFTGETAIFI 305
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRA+DILM+NFHLP+STL MLVSAF G++ K+ Y HAI+ YRFYSYGD LLF
Sbjct: 306 TPGYRFRAIDILMTNFHLPRSTLFMLVSAFSGLKTMKQAYAHAIAAGYRFYSYGDACLLF 365
Query: 358 QKR 360
+R
Sbjct: 366 PER 368
>gi|241759145|ref|ZP_04757253.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
flavescens SK114]
gi|241320564|gb|EER56841.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
flavescens SK114]
Length = 363
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 22 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALP----TLPIEDKHFGDLPDYVAPGDVLV 77
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 78 FNNTKVMKARLFGQKAS-----GGKIEALIERVLDTHTALAHIRSSKSPKPGTELIF--- 129
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ + + + + G +PLPPYI R D D Y
Sbjct: 130 --EGDIRAVMMERAEE--LFCLKFEGEQTVYELLEQNGHLPLPPYIE--RAADDEDDSRY 183
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 184 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 243
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 244 HSEWFDVPAETVAAVEAAKARGNKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITPG 303
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+E + +Y++A+ YRF+SYGD +L
Sbjct: 304 YRFNVADRLITNFHLPKSTLLMLVSAFSGMEHIRSVYRYAVEQEYRFFSYGDAMIL 359
>gi|288958938|ref|YP_003449279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azospirillum sp. B510]
gi|288911246|dbj|BAI72735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azospirillum sp. B510]
Length = 342
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 180/358 (50%), Positives = 232/358 (64%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLPP RIA PV PRD+ARL+ V + D +V DLPA L D +V
Sbjct: 1 MKTADFDFDLPPDRIAEHPVRPRDAARLLEV------GSSLRDLIVRDLPALLQPGDLMV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R E + TLH R+ W+ +++P K +K GD + ++
Sbjct: 55 VNDTRVIPARLDGRR------GEVAVEITLHKRLGERDWATFSKPGKRLKPGDTIVI-AE 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + + A + E+ L FS G +L + G +PLPPYI +R DA D DY
Sbjct: 108 DFSAEVTA-----KDGMEVRLRFSAGGADLMEALHRHGRMPLPPYI--RRKADAGDNADY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A +G+VAAPTAGLHFT++LL+ L + G++ VTLHVGAGTF+PVKV+D DH M
Sbjct: 161 QTVFAAREGAVAAPTAGLHFTADLLAALDARGVRRVPVTLHVGAGTFLPVKVDDIADHKM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I TA A+N + GGRIVSVGTT+LR+LETA DG + P+SG T+IFITPG
Sbjct: 221 HSEWGEISPETAAAVNETRKAGGRIVSVGTTALRILETAGRPDGTLVPFSGDTDIFITPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR VD+L +NFHLPKSTL MLV AF G + + Y HAI H YRF+SYGD SLL +
Sbjct: 281 YRFRIVDLLWTNFHLPKSTLFMLVCAFAGYDRMRAAYAHAIDHDYRFFSYGDASLLHR 338
>gi|261252138|ref|ZP_05944711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
orientalis CIP 102891]
gi|260935529|gb|EEX91518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
orientalis CIP 102891]
Length = 350
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLEQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + V S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERVVDEKSILAHVRCSKSPKPGSTIFVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EFSAQMVARHDA--LFELKFNSEQNVLAVLEEIGHMPLPPYI--DRPDEDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D +H M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDEPLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDDIHEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|229523437|ref|ZP_04412844.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TM 11079-80]
gi|229339800|gb|EEO04815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TM 11079-80]
Length = 352
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEEADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|119468103|ref|ZP_01611229.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Alteromonadales bacterium TW-7]
gi|119448096|gb|EAW29360.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Alteromonadales bacterium TW-7]
Length = 343
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 205/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ + IS + SD+ +N ND ++
Sbjct: 1 MRVADFSFDLPDELIARFPKKDRTSSRLLSLDGPTG---EISHKVFSDILELVNENDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + + R SK +K G+ +
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKVEVLVERVLDEHRVLAHVRASKSLKPGNEVIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + +AT+I + + + + ++ +G +PLPPYI RP D D Y
Sbjct: 110 --EGKAKATMIAR--HDTLFELEFDHSKNVLDTLNDIGHMPLPPYI--DRPDDEADRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ L + G+ + FVTLHVGAGTF PV+VE D+H+M
Sbjct: 164 QTVYGEKPGAVAAPTAGLHFDEPLMAALKNKGVNMAFVTLHVGAGTFQPVRVETIDEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + A+ K+ GGR+++VGTTS+R LE+A G ++ + G T+IFI P
Sbjct: 224 HSEYIEVPQDVVDAVAQTKANGGRVIAVGTTSMRSLESAAKIHGGKLDTYFGDTDIFIFP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +++NFHLP+STL+MLVSAF G + Y AI YRF+SYGD L +K
Sbjct: 284 GYQFNVVDAMVTNFHLPESTLIMLVSAFSGQDNIMGAYNTAIEQKYRFFSYGDAMFLTRK 343
>gi|194290672|ref|YP_002006579.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
taiwanensis LMG 19424]
gi|238692773|sp|B3R6J3|QUEA_CUPTR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193224507|emb|CAQ70518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
taiwanensis LMG 19424]
Length = 355
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 149/361 (41%), Positives = 208/361 (57%), Gaps = 19/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP----NLSCPLVISDHLVSDLPAFLNSNDA 58
+ +FDF LPP IA + R ++RL+VV + + + ++D SD+ +L +D
Sbjct: 4 LSDFDFPLPPELIAQSALPDRSASRLLVVERLAPGDTADAVHMADRAFSDIVDYLRPDDL 63
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+T+VI A+ G + ++ + + ++ R SK +G LH
Sbjct: 64 LVFNDTRVIKARFFGHKPS-----GGKVEVLVERVLDTHTVLAQVRASKTPVEGSALHLA 118
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
A + L F ++L I G +PLPPYI DA D
Sbjct: 119 DDAF-----AVTVGPRVDQFFTLRFPEPALDL---IERYGRLPLPPYITHD--PDAYDET 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF L +RL + G++ F+TLHVGAGTF PV+ E+ +H
Sbjct: 169 RYQTVYARSPGAVAAPTAGLHFDDALFARLDAAGVRRAFLTLHVGAGTFQPVRTENLAEH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I AQA+ ++RGGR+++VGTTSLR LE+A DG + SG T+IFIT
Sbjct: 229 KMHSEWYAISEDLAQAVRETRARGGRVIAVGTTSLRALESAAQPDGTLAAGSGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSA G++ + Y+HA+ YRF+SYGD LL +
Sbjct: 289 PGYRFRLVDALITNFHLPKSTLLMLVSALAGVQAIRAAYRHAVEQRYRFFSYGDAMLLTR 348
Query: 359 K 359
+
Sbjct: 349 Q 349
>gi|88706927|ref|ZP_01104626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Congregibacter litoralis KT71]
gi|88698849|gb|EAQ95969.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Congregibacter litoralis KT71]
Length = 352
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 198/359 (55%), Gaps = 13/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+ V+ + +DLP LN+ D +V
Sbjct: 1 MQRSDFSYDLPQELIAQTPLAERSASRLLCVN---GMQKSFEHKVFTDLPEQLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L GV+ + + S + R SK K G + +
Sbjct: 58 FNNTRVLPARLFGVKE-----TGGRVEILIERLTGDCSALAHIRASKTPKPGMSIALAAD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + GE L S L ++ +G +PLPPYI R + Y
Sbjct: 113 VDSPATDVRLTVQGREGE--LFKITSAESLGPLLARIGHMPLPPYIDRADAAED--KERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL RL ++G++ VTLHVGAGTF PV+ +D DH M
Sbjct: 169 QTVYAQRDGAVAAPTAGLHFDEALLKRLDALGVRRAEVTLHVGAGTFQPVRSDDIRDHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E +D A+ + ++RGGR+V+VGTT++R LETA G + P+ G T +FI PG
Sbjct: 229 HAEYLEVDQAVCDAVEATRARGGRVVAVGTTAVRSLETAAAS-GRLGPYVGDTQLFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF VD +++NFHLP+STLLMLVSAF G + Y A+ YRF+SYGD L +
Sbjct: 288 YRFHCVDAMVTNFHLPESTLLMLVSAFSGKDLMLAAYNEAVKERYRFFSYGDAMFLTPQ 346
>gi|84515554|ref|ZP_01002916.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Loktanella
vestfoldensis SKA53]
gi|84510837|gb|EAQ07292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Loktanella
vestfoldensis SKA53]
Length = 351
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 167/362 (46%), Positives = 230/362 (63%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL++ + I+D +V+DL L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRSSARLLLAQGDR-----IADQIVTDLVDILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHIN--RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+LNG R I TL + SWS +P K ++ G+++ F
Sbjct: 56 LNDTKVIPARLNGTRARSGEAGDTSARIEVTLLEPRADGSWSALVKPLKKLRDGEVVVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L AT+ + G+ L F+++G + + ++ VG +PLPPYIA KR DA D
Sbjct: 116 AD-----LSATMTGRG-DGQAYLQFNLTGDDFDAALNAVGAMPLPPYIAAKRAADAADMD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF LL L + G+ + +VTLHVGAGTF+PVKV+D +H
Sbjct: 170 DYQTYWAKHAGAVAAPTASLHFDGPLLQALAARGVTMSYVTLHVGAGTFLPVKVDDVSEH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K+ G R++ VGTT+LRL+E+A + G + PW+G T+IFIT
Sbjct: 230 KMHAEWGEVTATAAAQINATKAAGKRVIPVGTTALRLIESAA-KGGQLQPWTGPTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G++ K +Y HAI+ YRF+SYGD SLL
Sbjct: 289 PGFTFQIADGLMTNFHLPKSTLMMLVSALMGMDRIKAIYAHAIAERYRFFSYGDASLLLP 348
Query: 359 KR 360
R
Sbjct: 349 DR 350
>gi|325143754|gb|EGC66071.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M01-240013]
Length = 356
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 206/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DL ++ D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLSDYVGEGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 293 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGR 350
>gi|163802454|ref|ZP_02196347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
AND4]
gi|159173755|gb|EDP58570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
AND4]
Length = 350
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 202/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLDQIQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTILVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + D + + + + +G +PLPPYI RP D D Y
Sbjct: 113 DEYTAQMVARHDALFE-----LKFNADKTVLEILEEIGHMPLPPYI--DRPDDDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDILLEKIKAKGAEFAYVTLHVGAGTFQPVKVDDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRIV+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIVAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T YQHA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYQHAVENQYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|319896582|ref|YP_004134775.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3031]
gi|301168885|emb|CBW28479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 10810]
gi|317432084|emb|CBY80434.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3031]
Length = 363
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 137/365 (37%), Positives = 200/365 (54%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|145635151|ref|ZP_01790856.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittAA]
gi|145640168|ref|ZP_01795752.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
gi|145267572|gb|EDK07571.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittAA]
gi|145274754|gb|EDK14616.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 22.4-21]
Length = 363
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 203/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + ++G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQIIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|145632489|ref|ZP_01788223.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 3655]
gi|144986684|gb|EDJ93236.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 3655]
Length = 363
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 202/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|90424090|ref|YP_532460.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisB18]
gi|90106104|gb|ABD88141.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisB18]
Length = 379
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 187/361 (51%), Positives = 243/361 (67%), Gaps = 9/361 (2%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
FDF+LP + IALRP PRD+ARL+VV P + D +V DLP +L DA+V N
Sbjct: 24 TDLFDFELPATAIALRPAQPRDAARLLVVRPG----AALHDGVVRDLPDWLAPGDALVVN 79
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI AQL+G R E +I TL R+ + W + +K + +GD++ F
Sbjct: 80 DTRVIAAQLSGRRI--GRDSEAKIEATLIKRLDGSRWQALVKGAKKLNEGDVVRFGHDGR 137
Query: 123 ---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+L+ATV K GEI L FS G L++ I+ +G PLPPYIA KR D RD D
Sbjct: 138 VCLLGQLDATVEHKGEAGEITLSFSFHGPTLDQAIAELGAPPLPPYIASKRAPDDRDAAD 197
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A +G+VAAPTAGLHFT L + L + G+ ++ VTLHVGAGTF+PVKV+DT+DH
Sbjct: 198 YQTMFAAHEGAVAAPTAGLHFTPELEAALAARGVSIHRVTLHVGAGTFLPVKVDDTEDHK 257
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G I TA ALN+V ++G RIV+VG+TSLRLLE+A +DG I P++ T IFITP
Sbjct: 258 MHAEWGTISRATADALNAVHAKGCRIVAVGSTSLRLLESAAADDGSIQPFADDTAIFITP 317
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYRF+AVD++M+NFHLP+STL MLVSAF G E ++ Y HAI+ YRFYSYGD LLF +
Sbjct: 318 GYRFKAVDLMMTNFHLPRSTLFMLVSAFAGRETMQRAYAHAIATGYRFYSYGDACLLFPE 377
Query: 360 R 360
R
Sbjct: 378 R 378
>gi|262274808|ref|ZP_06052619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Grimontia
hollisae CIP 101886]
gi|262221371|gb|EEY72685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Grimontia
hollisae CIP 101886]
Length = 351
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 136/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P R ++RL+ ++ N +S +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDSLIARYPQPDRTASRLLQLNGNTG---ELSHRQFTDILDLVEPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARVYGRKAS-----GGKIEVLVERMLDEKTILAHVRSSKSPKPGTQLFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D EA ++ + + + + + + ++ VG +PLPPYI RP + D Y
Sbjct: 113 D---EFEAEMVARHDA--LFEIRFVGEQAVLDILNQVGHMPLPPYI--DRPDEDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF N+L+ L G++ FVTLHVGAGTF PV+VE+ +DH+M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDENILAALKEKGVQTAFVTLHVGAGTFQPVRVENINDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII----NPWSGFTNIF 296
H+E + A+ + K+RG R+++VGTTS+R LE+A P+ T IF
Sbjct: 226 HAEYAEVPQEVVDAVLATKARGNRVIAVGTTSVRSLESAAQHAKKEGTELQPFFDDTQIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVS+F G + Y+ A+S+ YRF+SYGD +
Sbjct: 286 IYPGYEWQLVDALVTNFHLPESTLIMLVSSFAGYDHVMNAYKEAVSNEYRFFSYGDAMFV 345
Query: 357 FQK 359
++
Sbjct: 346 TRQ 348
>gi|325206771|gb|ADZ02224.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M04-240196]
Length = 346
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 206/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DL ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLSDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMILGR 340
>gi|21263869|sp|Q8XVW5|QUEA_RALSO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 356
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 202/356 (56%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ + D +DL +L D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPDRTASRLLAARHDAQGT-HFDDRQFADLVDYLRPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+ G + +I + + ++ R SK G L
Sbjct: 63 DTRVIKARFFGHKAS-----GGKIEVLVERLLDEHTVLAQIRSSKSPVAGSTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F +EL I G +PLPPYI D+ D YQT
Sbjct: 118 ------VTVGPRHEPFFTLRFPQPALEL---IEQYGRLPLPPYIEHT--PDSFDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+ + ++ GGRIV+VGTTS+R LE+A DG + SG T+IFITPGYR
Sbjct: 227 EWYAISPDLAEAIRATRAVGGRIVAVGTTSMRALESAAQPDGTLAAGSGETDIFITPGYR 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 287 FRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTR 342
>gi|254509984|ref|ZP_05122051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium KLH11]
gi|221533695|gb|EEE36683.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium KLH11]
Length = 353
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 160/360 (44%), Positives = 210/360 (58%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA RP PR SARL+V I D V LP L D +V
Sbjct: 6 MKLSDFDFHLPEHLIATRPASPRSSARLLVA-----QEDAIQDRNVFHLPDLLQPGDRLV 60
Query: 61 FNNTKVITAQLNGVR--FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R I TL W+ +P K +K G+ + F
Sbjct: 61 LNDTRVIPARLSGRRHRDSAQGPVSAAIEATLLEPQPDGCWAALIKPLKKVKPGEEIVFS 120
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ +D+ + G+ L F+++G + + + G +PLPPYIA KR D +D
Sbjct: 121 DDLSAT------LDRVSDGQAYLRFNLTGEDFDHALEQAGAMPLPPYIAAKRAADEQDKT 174
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H
Sbjct: 175 DYQTVWARNAGAVAAPTASLHFDDTLLRALAARGVAFTHVTLHVGAGTFLPVKVEDVTTH 234
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI
Sbjct: 235 KMHAEWGRVSAQAAAEIAATKAAGGRVIPVGTTALRLIESAAR-GGQIAPWEGETDIFIY 293
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RF D LM+NFHLPKSTLLMLVSA G + + +Y HAI+ YRF+SYGD SLL
Sbjct: 294 PGFRFHVTDALMTNFHLPKSTLLMLVSALMGQDRVRTIYDHAIAEEYRFFSYGDASLLIP 353
>gi|213962211|ref|ZP_03390475.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sputigena Capno]
gi|213955217|gb|EEB66535.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sputigena Capno]
Length = 349
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 144/361 (39%), Positives = 199/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD ARLMVVH I L D+ + + D V
Sbjct: 1 MKLSNFNFDLPKELLAEYPSENRDEARLMVVHRKTG---EIEHKLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + + +I L + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTKAKIEVFLLRELSAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E + ++ +G PLP YI RP++ D
Sbjct: 114 K---NAELVAEVIDNTTSRGRTLRFLYDGTYEEFRQHLTELGQTPLPKYI--SRPVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF PV+VED
Sbjct: 169 EERYQTIYAKHEGAVAAPTAGLHFSKHLMKRLEIKGITFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I + +N+ K R+ +VGTT +R+LE++ + D +NP+ G+TN F
Sbjct: 229 KHKMDSEEIHIPESQTKIINTAKENKKRVCAVGTTVMRVLESSVSSDCFVNPFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSVANAMITNFHTPKSTLLMMVSAFAGHDLIMRAYKEAVEQKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|183601032|ref|ZP_02962525.1| hypothetical protein PROSTU_04653 [Providencia stuartii ATCC 25827]
gi|188019370|gb|EDU57410.1| hypothetical protein PROSTU_04653 [Providencia stuartii ATCC 25827]
Length = 356
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R + RL+ + ++ + +D+ L+ D +V
Sbjct: 1 MRVSDFTFELPEELIAHYPQAQRSACRLLSLDGPTG---QLTHGIFTDILEKLSPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEMLVERMLDEHRVLAHIRASKAPKEGAELILGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + G + V ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---VNATMVAR--HGALFEVQFDDQRDVLSILNEIGHMPLPPYI--DRPDEESDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V+ +DH+M
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLDALREKGVEMAFVTLHVGAGTFQPVRVDAIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ ++ VD L++NFHLP+STL+MLVSAF G + T + Y+ A++ YRF+SYGD + +
Sbjct: 286 PGFEYQVVDALITNFHLPESTLIMLVSAFAGYQNTMQAYKEAVAQKYRFFSYGDAMYITR 345
>gi|300214785|gb|ADJ79201.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius CECT 5713]
Length = 347
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 136/355 (38%), Positives = 199/355 (56%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FD+DLP S IA P+ RD +R++++ D ++ LN DA+V N
Sbjct: 8 TEDFDYDLPESLIAQTPLEERDQSRMLILDSKTG---EYQDDYFYNVIDQLNPGDALVMN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+++V+ A++ GV+ + L + W +P++ K G + F G
Sbjct: 65 DSRVMPARIYGVKP----ETGGHVEVLLLNNTHGDEWETLVKPARRAKVGTKISF----G 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+ATV + G L+ F GI + +G +P PPYI K + YQT
Sbjct: 117 DGALKATVTKELEHGGRLIEFEYDGI-FMEILDKLGEMPSPPYIKEK----LENPEMYQT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y++ GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV ++ +DH MHS
Sbjct: 172 VYSREVGSAAAPTAGLHFTKELLHKIEEKGVKLVYLTLHVGLGTFRPVSEKNIEDHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V+ GGRIV+ GTTS+R LET T+ +G I SG+T+IFI PGY
Sbjct: 232 EFYRLTEEAAATLNEVRKNGGRIVATGTTSIRTLETIGTKYNGEIKADSGWTDIFIKPGY 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V ++NFHLPKSTL+MLV++F G E Y+HA+ YRF+S+GD +
Sbjct: 292 EWKVVQAFITNFHLPKSTLVMLVASFTGRENILNAYKHAVEEKYRFFSFGDAMFI 346
>gi|315180997|gb|ADT87911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
furnissii NCTC 11218]
Length = 352
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 137/364 (37%), Positives = 202/364 (55%), Gaps = 20/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPMAERTASRLLQLDGNTG---ELVDGTFKDVLNCVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHSILAHVRCSKPPKPGTELFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMDARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PV+V++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIKAKGVEFAYVTLHVGAGTFQPVRVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y HA+ YRF+SYGD +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYDHAVKQQYRFFSYGDAMFI 345
Query: 357 FQKR 360
+KR
Sbjct: 346 -RKR 348
>gi|307543992|ref|YP_003896471.1| S-adenosylmethionine:tRNAribosyltransferase-isome rase [Halomonas
elongata DSM 2581]
gi|307216016|emb|CBV41286.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Halomonas
elongata DSM 2581]
Length = 359
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 194/360 (53%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP + IA P R RL+ V + +L L D +V
Sbjct: 1 MQRADFHYELPEALIARYPSEQRSDCRLLCVDGASGA---LDHRRFPELIDKLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + + L + + + R SK K G L F
Sbjct: 58 FNDTRVIPARLHGHKAS-----GGRVEMLLERPLDAHRGLAHLRSSKSPKIGTELTFEGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + + + L + G +PLPPYI R + D Y
Sbjct: 113 -------IQAVVEGRREALFELRFLGETPLIALLERHGHMPLPPYIT--RDDELSDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL RL + G++ FVTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTVYARRDGAVAAPTAGLHFDEPLLERLAAKGVESAFVTLHVGAGTFQPVRVDDIREHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A + + + ++RG R+V+VGTTS+R LE+A+ + DG I P+SG T+IFI
Sbjct: 224 HSEWIEVSASVCEQVRAARARGNRVVAVGTTSVRCLESASLKSPDGDIAPYSGETDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY +R VD L++NFHLP+STLLMLVS+F G + Y+ A+ Y F+SYGD L +
Sbjct: 284 PGYEWRVVDALVTNFHLPESTLLMLVSSFAGYDTVMAAYREAVQEGYAFFSYGDAMFLTR 343
>gi|81427982|ref|YP_394981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus sakei subsp. sakei 23K]
gi|91207426|sp|Q38YQ8|QUEA_LACSS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78609623|emb|CAI54669.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Lactobacillus sakei subsp. sakei 23K]
Length = 343
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 146/355 (41%), Positives = 201/355 (56%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FD++LP IA P+ R ++RL+V+ + D + D+ LN DA+V N
Sbjct: 4 TEDFDYNLPEELIAQTPMIERAASRLLVMDHETGA---LEDKVFYDIIDELNPGDAVVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L GV+ L + W V +P+K K G + F G
Sbjct: 61 NTRVLPARLYGVKP----DTGGHEEVLLLNNTHDDEWEVLMKPAKRAKVGTEVVF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L A V + G ++ F GI + + +G +PLPPYI K YQT
Sbjct: 113 DGQLRAIVTKELEHGGRMIEFKYDGI-FMQILEALGEMPLPPYIKEKLDD----PEMYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAG H+T LL ++ GIK+ ++TLHVG GTF PV ++ +DH MHS
Sbjct: 168 VYAKEPGSAAAPTAGFHWTEELLQKVQDKGIKLVYLTLHVGLGTFRPVSEDNVEDHKMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN VK GGRIV+ GTTS+R LET T+ DG I SG+T IFI PGY
Sbjct: 228 EFYRLTEEAAATLNEVKQNGGRIVATGTTSIRTLETIATKFDGEIKADSGWTEIFIKPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++AVD ++NFHLPKSTL+MLV++F G E YQHA+ YRF+S+GD +
Sbjct: 288 QWKAVDAFITNFHLPKSTLVMLVASFTGRENILNAYQHAVDERYRFFSFGDAMFV 342
>gi|73542492|ref|YP_297012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
eutropha JMP134]
gi|91207398|sp|Q46XG5|QUEA_RALEJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|72119905|gb|AAZ62168.1| Queuosine biosynthesis protein [Ralstonia eutropha JMP134]
Length = 349
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 147/361 (40%), Positives = 203/361 (56%), Gaps = 19/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP----NLSCPLVISDHLVSDLPAFLNSNDA 58
+ +FDF LPP IA + R ++RL+VV + + D SD+ +L D
Sbjct: 4 LSDFDFPLPPELIAQSALPDRSASRLLVVERLAPGEQPDAIRLVDRAFSDIIGYLKPEDL 63
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+T+VI A+ G + ++ + + ++ R SK +G +LH
Sbjct: 64 LVFNDTRVIKARFFGQKPS-----GGKVEVLVERVLDTHTVLAQVRASKTPAEGSLLHLA 118
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
A + L F ++L I G +PLPPYI DA D
Sbjct: 119 EDAF-----AVTVGPRVDQFFTLRFPAPALDL---IEQYGRLPLPPYITHD--PDAYDET 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF L +RL + G++ F+TLHVGAGTF PV+ E+ +H
Sbjct: 169 RYQTVYARNPGAVAAPTAGLHFDDALFARLDAAGVRRAFLTLHVGAGTFQPVRTENIAEH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I A A+ + RGGR+++VGTTSLR LE+A DG + +G T+IFIT
Sbjct: 229 KMHSEWYAISPELADAVRETRKRGGRVIAVGTTSLRALESAAKPDGTLEAGNGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+FR VD L++NFHLPKSTLLMLVSA G+E + Y+HA+ YRF+SYGD LL +
Sbjct: 289 PGYQFRLVDALITNFHLPKSTLLMLVSALAGVEAIRAAYRHAVEARYRFFSYGDAMLLTR 348
Query: 359 K 359
+
Sbjct: 349 Q 349
>gi|237808776|ref|YP_002893216.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Tolumonas
auensis DSM 9187]
gi|259551487|sp|C4L7L4|QUEA_TOLAT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|237501037|gb|ACQ93630.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Tolumonas
auensis DSM 9187]
Length = 348
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 202/363 (55%), Gaps = 21/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P+ R ++RL+++ N D+ L D +V
Sbjct: 1 MLVSDFQFDLPDELIARYPMPERSASRLLMLDGNSGET---RHGQFRDVLDLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERILDDHSVLAHVRASKAPKPGTQILL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 110 --DNGFSAKMVAR--HDTLFELHFAGDLPVLDILNQIGHMPLPPYI--DRPDENSDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL+ L G+ +VTLHVGAGTF PV+VE +DH M
Sbjct: 164 QTVYNQRPGAVAAPTAGLHFDEPLLAALREKGVDFAYVTLHVGAGTFQPVRVERLEDHQM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE + A +N+ + RGGR+V+VGTTS+R LETA ++P+ G T+IF
Sbjct: 224 HSEYAEVPAEVIAKINATRERGGRVVAVGTTSVRSLETAAQASLKAGKPLSPFFGDTSIF 283
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD+L++NFHLP STL+MLVSAF G E YQ AI+ YRF+SYGD +
Sbjct: 284 IFPGYQYQLVDVLITNFHLPGSTLIMLVSAFAGYEHVMNAYQEAITSGYRFFSYGDAMFI 343
Query: 357 FQK 359
++
Sbjct: 344 TRQ 346
>gi|90962099|ref|YP_536015.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius UCC118]
gi|227891121|ref|ZP_04008926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ATCC 11741]
gi|301301357|ref|ZP_07207499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ACS-116-V-Col5a]
gi|90821293|gb|ABD99932.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius UCC118]
gi|227866995|gb|EEJ74416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ATCC 11741]
gi|300851017|gb|EFK78759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ACS-116-V-Col5a]
Length = 347
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 137/355 (38%), Positives = 200/355 (56%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FD+DLP S IA P+ RD +R++++ D ++ LN DA+V N
Sbjct: 8 TEDFDYDLPESLIAQTPLEERDQSRMLILDSKTG---EYQDDYFYNVIDQLNPGDALVMN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+++V+ A++ GV+ + L + W +P++ K G + F G
Sbjct: 65 DSRVMPARIYGVKP----ETGGHVEVLLLNNTHGDEWETLVKPARRAKVGTKISF----G 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+ATV + G L+ F GI + +G +PLPPYI K + YQT
Sbjct: 117 DGALKATVTKELEHGGRLIEFEYDGI-FMEILDKLGEMPLPPYIKEK----LENPEMYQT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y++ GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV ++ +DH MHS
Sbjct: 172 VYSREVGSAAAPTAGLHFTKELLHKIEEKGVKLVYLTLHVGLGTFRPVSEKNIEDHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V+ GGRIV+ GTTS+R LET T+ +G I SG+T+IFI PGY
Sbjct: 232 EFYRLTEEAAATLNEVRKNGGRIVATGTTSIRTLETIGTKYNGEIKADSGWTDIFIKPGY 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V ++NFHLPKSTL+MLV++F G E Y+HA+ YRF+S+GD +
Sbjct: 292 EWKVVQAFITNFHLPKSTLVMLVASFTGRENILNAYKHAVEEKYRFFSFGDAMFI 346
>gi|254374630|ref|ZP_04990111.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida GA99-3548]
gi|151572349|gb|EDN38003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida GA99-3548]
Length = 340
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 208/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIVDYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVED- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ R + G IPLPPY+ R + D Y
Sbjct: 114 -----TLAKVLDK--DGGMYLLEIQGDKDIYRLMEEFGHIPLPPYMK--RDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF G E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFAGKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|291165804|gb|EFE27852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Filifactor
alocis ATCC 35896]
Length = 340
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 205/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F +DLP + IA P+ RDS++L+++ I D+ +L D +V
Sbjct: 1 MNTKDFYYDLPEACIAQEPLKQRDSSKLLLLDKKTG---EIEHKHFKDITQYLKKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L R+ +W V A+P+K +K G+I+ F
Sbjct: 58 MNNTRVLPARLFGTK----EDTGANIELLLLKRMDLTTWEVMAKPAKRLKIGNIIFFHQ- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V + + G ++ F GI E + ++GT+PLPPYI +K Y
Sbjct: 113 ----TLSAVVKEIKDEGIRIIEFIYDGI-FEEILDMLGTMPLPPYIHKKLED----KERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LLS L IG+++ +VTLHVG GTF PV VED H M
Sbjct: 164 QTVYSKVDGSAAAPTAGLHFTKKLLSELQDIGVQLEYVTLHVGLGTFRPVMVEDVTKHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I AQ +N K+ RI+ VGTTS+R LE++ DG I+ SG+T+IFI P
Sbjct: 224 HTEYYEIQKDVAQRINQAKAEKRRIICVGTTSVRTLESSAR-DGRISELSGWTDIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF+ D L++NFHLP+STLLMLVSA E Y+ AI YRF+S+GD +
Sbjct: 283 YRFQMADALITNFHLPESTLLMLVSALANKEFIMHAYKTAIEQNYRFFSFGDAMFIHN 340
>gi|91225158|ref|ZP_01260380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
alginolyticus 12G01]
gi|269965152|ref|ZP_06179286.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
alginolyticus 40B]
gi|91190101|gb|EAS76372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
alginolyticus 12G01]
gi|269830138|gb|EEZ84365.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
alginolyticus 40B]
Length = 350
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 140/363 (38%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLGQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVARHDA--LFELKFSSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKVE+ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVENINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + +A+ + K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVEAIKATKARGGRIIAVGTTSVRSLESAAQDALQKGTELAPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|255022138|ref|ZP_05294141.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus caldus ATCC 51756]
gi|254968402|gb|EET25961.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus caldus ATCC 51756]
Length = 346
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 139/358 (38%), Positives = 202/358 (56%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F + LPP RIA P+ R ++RL+V+ P + D V +LP FL + D +V
Sbjct: 1 MKKSDFYYHLPPERIAQEPLPERSASRLLVLDPRTG---HLCDSSVRELPQFLRAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L+ + + L ++P+ AR SK +K G +
Sbjct: 58 FNDTRVLPARLHARK-----PTGGAVELLLERLLAPDRARFLARSSKTLKPGARITLAGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L G ++ + G + G +PLPPYI R A D Y
Sbjct: 113 EAVELL-------AREGRMVELGLPGGGNWLDILEAQGEVPLPPYI--DRAPAAADRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF ++LL+RL + G++ +TLHVGAGTF+PV+ E+ ++H M
Sbjct: 164 QTVYARNPGAVAAPTAGLHFDADLLARLDAAGMERAHITLHVGAGTFLPVEAEEVEEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T + + ++RGGRI ++GTT+ R LE A G + ++G T+IF+ PG
Sbjct: 224 HSERVTVPAATVEQVRRAQARGGRIFAIGTTACRALEGAARS-GSLQAFAGETDIFLYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FR +D L +NFHLP+STLLMLVSA G E Y HA++ YRF+SYGD L+
Sbjct: 283 RPFRVIDGLFTNFHLPESTLLMLVSALAGRERILAAYAHAVAQQYRFFSYGDAMLILP 340
>gi|218438447|ref|YP_002376776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 7424]
gi|218171175|gb|ACK69908.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7424]
Length = 366
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 148/369 (40%), Positives = 201/369 (54%), Gaps = 25/369 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP IA PV PRDS+RL++V S + DL +L D +VF
Sbjct: 6 LLSSYDYQLPSELIAQTPVVPRDSSRLLIVD----SLTTYSHSVFRDLGKWLLPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF--- 118
NNT+VI A+L G + + L S W +P K K G + F+
Sbjct: 62 NNTRVIPARLYGRKV-----TGSPVEILLLEEKSNLCWLALVKPGKRFKIGSEIEFYSSI 116
Query: 119 --SQDGQSRLEATVIDK-WNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDA 174
++ + L+A V+++ TG LL F + + +G IP PPYI
Sbjct: 117 AQGENQEVVLKAKVLERDETTGGRLLQFELKSDRSFWELLEQIGEIPFPPYI----SSSD 172
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA+ G+VAAPTAGLHFT+ LL L+S GI VTLHVG GTF PV+VED
Sbjct: 173 AKASQYQTVYAQKSGAVAAPTAGLHFTNELLESLLSQGIDQAHVTLHVGVGTFRPVEVED 232
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PW 289
H+MH+E + T Q + + K+RGGR+++VGTT +R LE A E + P+
Sbjct: 233 ITQHLMHTEWVEVPEATVQKIEATKARGGRVIAVGTTVVRSLEGAAKETQPPDGKYLLPF 292
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T++FI PGY + VD L++NFHLPKS+LLMLVSA G E +YQ AI YRFYS
Sbjct: 293 RGKTDLFIYPGYSWGVVDGLITNFHLPKSSLLMLVSALIGRERLLSLYQVAIEERYRFYS 352
Query: 350 YGDTSLLFQ 358
+GD L+
Sbjct: 353 FGDAMLILP 361
>gi|254506743|ref|ZP_05118883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus 16]
gi|219550324|gb|EED27309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus 16]
Length = 360
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 137/363 (37%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 11 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLEQVQPGDLVV 67
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 68 FNNTRVIPARMFGRKES-----GGKLEVLVERVLDEKSILAHVRCSKSPKPGTTIFIGEN 122
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + + + +G +PLPPYI RP + D Y
Sbjct: 123 D---EYSAEMVAR--HDALFELKFNAEQNVLAVLEEIGHMPLPPYI--DRPDEDSDKERY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PVKV++ ++H M
Sbjct: 176 QTVYNEKPGAVAAPTAGLHFDEPLLEKIKAKGVEFAYVTLHVGAGTFQPVKVDNINEHHM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 236 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDAIKKGTELAPFFGDTEIF 295
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 296 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 355
Query: 357 FQK 359
+K
Sbjct: 356 KKK 358
>gi|17547431|ref|NP_520833.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum GMI1000]
gi|17429734|emb|CAD16419.1| probable s-adenosylmethionine:trna ribosyltransferase-isomerase
(queuosine biosynthesis protein quea) [Ralstonia
solanacearum GMI1000]
Length = 362
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 202/356 (56%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ + D +DL +L D +VFN
Sbjct: 10 LSDFDFDLPPELIAQTALPDRTASRLLAARHDAQGT-HFDDRQFADLVDYLRPGDLLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+ G + +I + + ++ R SK G L
Sbjct: 69 DTRVIKARFFGHKAS-----GGKIEVLVERLLDEHTVLAQIRSSKSPVAGSTLRLADAFD 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F +EL I G +PLPPYI D+ D YQT
Sbjct: 124 ------VTVGPRHEPFFTLRFPQPALEL---IEQYGRLPLPPYIEHT--PDSFDETRYQT 172
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H MHS
Sbjct: 173 VYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRMHS 232
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+ + ++ GGRIV+VGTTS+R LE+A DG + SG T+IFITPGYR
Sbjct: 233 EWYAISPDLAEAIRATRAVGGRIVAVGTTSMRALESAAQPDGTLAAGSGETDIFITPGYR 292
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 293 FRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTR 348
>gi|304311792|ref|YP_003811390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HdN1]
gi|301797525|emb|CBL45745.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HdN1]
Length = 346
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 190/356 (53%), Gaps = 11/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F+LP IA P R +RL+VV + D DL +L D +V
Sbjct: 1 MQRSDFHFELPAELIASHPAQERTGSRLLVVDRKQHA---LHDRQFPDLLDWLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + +S + R SK K G + +
Sbjct: 58 FNNTRVIPARLFGQKE-----TGGQVEILVERLLSARKCLAHVRASKSPKPGSAIQVGAY 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + EL + G IPLPPYI R + RD Y
Sbjct: 113 QLRVIARHDALFELALETATNAPDKRPAELTDLLEQEGHIPLPPYI--DRADEPRDRERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF L RL G+++ VTLHVGAGTF PV+ E+ +H M
Sbjct: 171 QTVYSKVPGAVAAPTAGLHFDQAFLERLRERGVRMAHVTLHVGAGTFQPVRAENILEHHM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + + K+ G R+++VGTTS+R LETA +G I P+ G T+IFI PG
Sbjct: 231 HSEWLQVSPEAVDLVRATKAAGKRVIAVGTTSVRSLETAAR-NGEIAPYEGDTDIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FR VD L++NFHLP+STL+MLVSA G E + Y HAI+ Y F+SYGD L+
Sbjct: 290 YSFRVVDALITNFHLPESTLIMLVSALAGREFVLQAYAHAIAQRYHFFSYGDAMLI 345
>gi|258626957|ref|ZP_05721759.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM603]
gi|258580781|gb|EEW05728.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM603]
Length = 352
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--ARPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+ + +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVDLAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESAAQDALKKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVQQQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|76262724|gb|ABA41450.1| S-adenosylmethionine: tRNA-ribosyltransferase isomerase
[Pseudomonas syringae pv. maculicola]
gi|330957505|gb|EGH57765.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 354
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL + D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHVRLGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARH--------DTLFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDQPLLDAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQSVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFITR 338
>gi|323499868|ref|ZP_08104827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
sinaloensis DSM 21326]
gi|323315109|gb|EGA68161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
sinaloensis DSM 21326]
Length = 350
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 136/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLDQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERVLDEKSILAHVRCSKSPKPGSTIFIGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVARHDA--LFELKFNAEQNVLAVLEEIGHMPLPPYI--DRPDEDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++ ++H M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDEPLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDNINEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIQATKARGGRIIAVGTTSVRSLESAAQDAIKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|67923312|ref|ZP_00516795.1| Queuosine biosynthesis protein [Crocosphaera watsonii WH 8501]
gi|67854835|gb|EAM50111.1| Queuosine biosynthesis protein [Crocosphaera watsonii WH 8501]
Length = 361
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 140/364 (38%), Positives = 197/364 (54%), Gaps = 21/364 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP IA PV PRD++RL+V++ P + DLP +L D +VF
Sbjct: 6 LLSSYDYYLPQELIAQNPVIPRDNSRLLVIN----SPENHIHSVFRDLPQWLLPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L P W +P K K G ++F D
Sbjct: 62 NNTRVIPARLYGAKS-----TGAPVEILLLEEKEPFCWLALVKPGKRFKIGSEIYFRLDD 116
Query: 122 GQSR-LEATVIDK-WNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L ATV+D+ TG LL F + ++ ++I +G IP PPY+
Sbjct: 117 DEDNFLVATVVDRDEETGGRLLKFQVDSLDLFWQKIEEIGQIPFPPYVTE----SDAKPS 172
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHFT LL L GI ++TLHVG GTF PV +++ +H
Sbjct: 173 QYQTIYAQKPGAVAAPTAGLHFTEELLENLQQKGINQAYITLHVGLGTFRPVDIDNIKEH 232
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-----TEDGIINPWSGFT 293
MH E + + + K+ GGR+++VGTT +R LE + + G T
Sbjct: 233 KMHQEWIEVPEIIVEKIKETKANGGRVIAVGTTVVRALEGTAKATEMAGKQELMEFRGKT 292
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PGY + +D L++NFHLPKS+LLMLVSA G E ++YQ AI YRFYS+GD
Sbjct: 293 DIFIYPGYSWCVIDGLITNFHLPKSSLLMLVSALIGRERLLELYQIAIEEKYRFYSFGDG 352
Query: 354 SLLF 357
L+
Sbjct: 353 MLIL 356
>gi|262402876|ref|ZP_06079437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC586]
gi|262351658|gb|EEZ00791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC586]
Length = 352
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D D+ F+ D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLTDGTFKDVLGFVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ G+++ +VTLHVGAGTF PV+V++ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQVKGVELAYVTLHVGAGTFQPVRVDNIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|118497819|ref|YP_898869.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida U112]
gi|194323792|ref|ZP_03057568.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida FTE]
gi|171472965|sp|A0Q7A0|QUEA_FRATN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|118423725|gb|ABK90115.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Francisella novicida U112]
gi|194322156|gb|EDX19638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida FTE]
Length = 338
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 133/357 (37%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+DH +D F++ D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADHKFTDFIDFISPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVED- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ R + D Y
Sbjct: 112 -----TLAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYMK--RDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ + G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKNKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD ++
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIY 338
>gi|260899307|ref|ZP_05907702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ4037]
gi|308106664|gb|EFO44204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ4037]
Length = 350
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVARHDA--LFELKFNSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDALKKGSELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|83943202|ref|ZP_00955662.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. EE-36]
gi|83846210|gb|EAP84087.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. EE-36]
Length = 354
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 164/361 (45%), Positives = 223/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR SA+++V + ++D V+++ +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPAVPRTSAKMLVAQGD-----HMTDTTVANMSDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R + I TL W+ +P K +K + + F
Sbjct: 56 LNDTRVIPARLSGLRHRESAQGPVQARIEVTLLEPRGDADWTALIKPLKKLKIDETVVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A ++ G+ L F+ SG + + ++ G +PLPPYIA KRP DA+D
Sbjct: 116 AD-----LSARLVG-VEDGQGRLRFNCSGDDFDAALNDAGAMPLPPYIAGKRPADAQDMT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF LL +L +IG+ VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVFAKNAGAVAAPTASLHFDQPLLDQLAAIGVCFSHVTLHVGAGTFLPVKVDDIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A A +++ K+ GGR++ VGTT+LRL+ETA G I PW G T+IFIT
Sbjct: 230 KMHSEWGQVSAQAAAEISATKAAGGRVIPVGTTALRLVETAARS-GNIQPWEGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTL+MLVSA G + +K+Y HAI YRF+SYGD SLLF
Sbjct: 289 PGFEFNVADALMTNFHLPKSTLMMLVSALMGQKTIQKIYNHAIESNYRFFSYGDASLLFP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|254228677|ref|ZP_04922101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
gi|262395137|ref|YP_003286991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
gi|151938856|gb|EDN57690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
gi|262338731|gb|ACY52526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
Length = 350
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLGQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVARHDA--LFELKFNADKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKVE+ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVENINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + +A+ + K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVEAIKATKARGGRIIAVGTTSVRSLESAAQDALKKGTELAPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|89069964|ref|ZP_01157296.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
granulosus HTCC2516]
gi|89044412|gb|EAR50543.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
granulosus HTCC2516]
Length = 349
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 162/360 (45%), Positives = 224/360 (62%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA+RP PR SARL++ + I D +VS+LP L D +V
Sbjct: 1 MQLSDFDFDLPDELIAVRPARPRSSARLLLAEGD-----AIGDRIVSELPRILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R E I TL + WS +P + +++G+ + F
Sbjct: 56 LNDTRVIPARLTGTRTRPGAAGEGVARIEVTLLEPRADGLWSALVKPLRKLREGEEVVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A ++ G+ LL F+ +G + + ++ G +PLPPYIA +RP DA D
Sbjct: 116 P-----RLTA-SLEAREAGQGLLRFNCTGEDFDAALAEAGAMPLPPYIAARRPADAADKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL + + G+++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWAERPGAVAAPTASLHFDAPLLEAIAARGVEITRVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + + GGR++ VGTT+LRL+ETA G I PW+G T+IFI
Sbjct: 230 RMHAEWGEVTEAAAAEIAATRGAGGRVIPVGTTALRLIETAARASGEIAPWTGETDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLP+STL+MLVSAF G+E + +Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVADGLMTNFHLPRSTLMMLVSAFMGMERVRAIYAHAVAERYRFFSYGDASLLLP 349
>gi|323136311|ref|ZP_08071393.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocystis sp. ATCC 49242]
gi|322398385|gb|EFY00905.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocystis sp. ATCC 49242]
Length = 359
Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats.
Identities = 184/362 (50%), Positives = 237/362 (65%), Gaps = 10/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSAR++VV D V DLPA L DA+V
Sbjct: 1 MRVDLFDFELPQDRIALRPANPRDSARMLVVPGK----GAFEDKSVRDLPACLRGGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R + TL R+ + W RP+K + GD++ F +
Sbjct: 57 VNDTRVIHARLSGRRLRGELSAG--VEATLIERLDASRWRALMRPAKKLAIGDLIRFGRE 114
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+ L+A V + + GE+ L F +SG L+ I + G +PLPPYIA KR DA D
Sbjct: 115 GGEACLQGALDARVEGRGDAGEVTLAFDLSGASLDEAIEVAGEMPLPPYIAGKRAADASD 174
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTAGLHFT NLL+ + + G++++ VTLHVGAGTF+PVK +DT
Sbjct: 175 ETDYQTVFAREAGAVAAPTAGLHFTPNLLAAVEARGVQLHRVTLHVGAGTFLPVKADDTG 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH E ID+ TA ALN ++RGGRIV+VGTT+LR+LE+A DG + P++ T IF
Sbjct: 235 SHRMHEEFARIDSGTAAALNEARARGGRIVAVGTTALRVLESAAAPDGRLAPYAQRTGIF 294
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRA D+L++NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD LL
Sbjct: 295 ITPGYRFRATDMLLTNFHLPRSTLFMLVSAFSGLERMKAAYAHAIEDGYRFYSYGDACLL 354
Query: 357 FQ 358
+
Sbjct: 355 HR 356
>gi|225076136|ref|ZP_03719335.1| hypothetical protein NEIFLAOT_01168 [Neisseria flavescens
NRL30031/H210]
gi|224952479|gb|EEG33688.1| hypothetical protein NEIFLAOT_01168 [Neisseria flavescens
NRL30031/H210]
Length = 342
Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 1 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALP----TLPIEDKHFGDLPDYVAPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKAS-----GGKIEALIERVLDAHTALAHIRSSKSPKPGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ + + + + G +PLPPYI R D D Y
Sbjct: 109 --EGDIRAVMMERAEE--LFCLKFEGEQTVYELLEQNGHLPLPPYIE--RAADDEDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPAETVAAVEAAKARGNKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSA G+E + +Y+HA+ YRF+SYGD +L
Sbjct: 283 YRFNVADRLITNFHLPKSTLLMLVSALSGMEHIRSVYRHAVEQEYRFFSYGDAMIL 338
>gi|148825473|ref|YP_001290226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittEE]
gi|166216724|sp|A5UAP2|QUEA_HAEIE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148715633|gb|ABQ97843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittEE]
Length = 363
Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats.
Identities = 137/365 (37%), Positives = 201/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKQAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|315224422|ref|ZP_07866252.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga ochracea F0287]
gi|314945625|gb|EFS97644.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga ochracea F0287]
Length = 349
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 199/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMV+H I L D+ + + D V
Sbjct: 1 MKLSNFNFELPKELLAEYPSENRDEARLMVIHRKTG---EIEHRLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + + +I L + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTKAKIEVFLLRELSAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E + ++ +G PLP YI RP++ D
Sbjct: 114 K---NAELVAEVIDNTTSRGRTLRFLYDGTYEEFRQHLTELGQTPLPKYI--SRPVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF PV+VED
Sbjct: 169 EERYQTIYAKYEGAVAAPTAGLHFSKHLMKRLEIKGITFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I + +N K R+ +VGTT +R+LE++ + DG +NP+ G+TN F
Sbjct: 229 KHKMDSEEIHIPESQTKIINVAKVNKKRVCAVGTTVMRVLESSVSSDGFLNPFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANAMITNFHTPKSTLLMMVSAFAGHDLIMRAYKEAVEQKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|114320370|ref|YP_742053.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkalilimnicola ehrlichii MLHE-1]
gi|122311890|sp|Q0A9C4|QUEA_ALHEH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114226764|gb|ABI56563.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkalilimnicola ehrlichii MLHE-1]
Length = 345
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 199/356 (55%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P R +RL+ + + ++D DL L D +V
Sbjct: 1 MHVDDFSFDLPEALIAHHPPEQRRDSRLLCLDRDTGA---VADRRFPDLVDLLRPEDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + + + + R SKV G +L
Sbjct: 58 LNDTRVIPARLFGHK-----PTGGRVEVLVERPLDRHRVLARLRASKVPAPGTVLTL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A V + GE + + + + G +PLPPYI +R A D Y
Sbjct: 110 --EGGVAAEVTGR--EGEFFTLRFTAEQTVLELLEHHGHMPLPPYI--RRADVAADRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF + LL+R+ + G+ +VTLHVG+GTF P++V D +H M
Sbjct: 164 QTVFARRPGAVAAPTAGLHFDNELLARIGARGVDTAWVTLHVGSGTFAPLRVSDPREHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + RGGR+V+VGTT +R LETA +DG + P+ G T+IFI PG
Sbjct: 224 HSEWLDVPPATCAAIERARGRGGRVVAVGTTVVRALETAA-QDGAVQPYQGETDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+RF AVD L++NFHLP STLLMLVSAF G E Y+HA++ YRF+SYGD +
Sbjct: 283 HRFHAVDALVTNFHLPGSTLLMLVSAFAGRERVLAAYRHAVAQRYRFFSYGDAMFI 338
>gi|325201501|gb|ADY96955.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M01-240149]
Length = 346
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 153/358 (42%), Positives = 209/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPMQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAAHETGHLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGR 340
>gi|126735609|ref|ZP_01751354.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. CCS2]
gi|126714796|gb|EBA11662.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. CCS2]
Length = 350
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 165/362 (45%), Positives = 228/362 (62%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDFDLP S IA RP PR SARL++ I D +V+ LP L D ++
Sbjct: 1 MKLSEFDFDLPDSLIATRPARPRSSARLLLAQGAT-----IEDRIVNQLPDILQPGDRLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G+R E ++ TL + SWS +P K ++ G+++ F
Sbjct: 56 LNDTKVIPARLFGLRHRSGEAGETAAKMDVTLLEPRADGSWSALIKPLKKVRDGEVIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
LEA V + G+ L F++ G + + ++ VG +PLPPYIA KR D D
Sbjct: 116 DD-----LEAEVTGRG-DGQGYLAFNLKGDDFDAALNAVGAMPLPPYIAGKRSADDADKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTYWARNSGAVAAPTASLHFDGPLLAALAARGVQFTHVTLHVGAGTFLPVKVDDVRDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K+ G R++ VGTT+LRL+E+A G++ PW+G T+IFIT
Sbjct: 230 KMHAEWGEVTADAAAEINATKAAGHRVIPVGTTALRLIESAAQR-GVMQPWTGPTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ D LM+NFHLPKSTL+MLVSA G + + +Y HAI+ YRF+SYGD+SLL
Sbjct: 289 PGFQFQMADGLMTNFHLPKSTLMMLVSALMGTDTIRAIYAHAIAQNYRFFSYGDSSLLLP 348
Query: 359 KR 360
+
Sbjct: 349 HK 350
>gi|153838068|ref|ZP_01990735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ3810]
gi|149748535|gb|EDM59394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ3810]
Length = 350
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVARHDA--LFELKFNSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|134301766|ref|YP_001121734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis WY96-3418]
gi|172044163|sp|A4IXG2|QUEA_FRATW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134049543|gb|ABO46614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis WY96-3418]
Length = 338
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 208/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVED- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ R + D Y
Sbjct: 112 -----TLAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYMK--RDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|166368637|ref|YP_001660910.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcystis
aeruginosa NIES-843]
gi|166091010|dbj|BAG05718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcystis
aeruginosa NIES-843]
Length = 369
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 148/366 (40%), Positives = 199/366 (54%), Gaps = 22/366 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LPP IA P RDS+RL+VV S L I DLP +L S D +VF
Sbjct: 10 LLSSYDYHLPPELIAQNPAETRDSSRLLVVDSPNSHNLAI----FRDLPTWLESGDLLVF 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF---- 117
N+T+VI A+L G + + L + W +P K K G + F
Sbjct: 66 NDTRVIPARLFGRK-----TTGAPVEILLLEEQDDHRWLSLVKPGKRFKVGSEVLFYPKT 120
Query: 118 -FSQDGQSRLEATVIDK-WNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDA 174
++D + A VID+ NTG LL F + G IP PPY+ +
Sbjct: 121 GPTEDQEKLWLAKVIDRDLNTGGRLLQFQRHPRRSFWDMLEEYGHIPFPPYVTESEAEED 180
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA QGSVAAPTAGLHFT L +L GI ++TLHVG GTF PV+VE+
Sbjct: 181 ----RYQTVYADKQGSVAAPTAGLHFTPELFHKLAQKGIDTAYITLHVGVGTFRPVEVEN 236
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN--PWSGF 292
+H+MH E I A TA+ + K+RGGR+++VGTT R LE A E + G
Sbjct: 237 ITEHLMHQEFLQISAETAEKIAQTKARGGRVIAVGTTVARALEGAIKESKSEKLTAFQGK 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
TN+F+ PGY++R +D +++NFHLPKS+L+MLVSA G E +YQ AI +RFYS+GD
Sbjct: 297 TNLFVYPGYQWRVIDGMITNFHLPKSSLMMLVSALIGRERLLALYQEAIQEHFRFYSFGD 356
Query: 353 TSLLFQ 358
L+
Sbjct: 357 AMLILP 362
>gi|84503044|ref|ZP_01001140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
batsensis HTCC2597]
gi|84388588|gb|EAQ01460.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
batsensis HTCC2597]
Length = 348
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 223/360 (61%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I D +V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEGLIATRPARPRSSARLLVAEGD-----AIHDAVVRDLTDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVR--FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R E I TL + W+ +P K +++G+++ F
Sbjct: 56 LNDTRVIPARLAGKRARDSDQGPTEARIDVTLLEPRASGHWAALIKPLKKVREGEVIRF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D +RL G+ LL F++ G + +R ++ G +PLPPYIA RP D RD
Sbjct: 115 SDDLSARLTGRDE-----GQGLLEFNLKGEDFDRALAEAGAMPLPPYIAAMRPPDDRDKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL R+ +G+++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARRSGAVAAPTASLHFDAPLLDRIAGMGVEMTHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + ++ GGRI+ VGTT+LRL+E+A G I PW G T+IFI
Sbjct: 230 RMHAEWGEVTAQAADEIAATRAGGGRIIPVGTTALRLIESAARS-GQIGPWRGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLP+STL+MLVSA G E + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFEFRVTDALMTNFHLPRSTLMMLVSALMGQERIRSVYDHAVARKYRFFSYGDASLLIP 348
>gi|320528164|ref|ZP_08029329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Solobacterium moorei F0204]
gi|320131512|gb|EFW24077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Solobacterium moorei F0204]
Length = 345
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 133/358 (37%), Positives = 198/358 (55%), Gaps = 16/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD++LP IA P+ R S+R++V+H D D+ +L++ D +V
Sbjct: 4 KTSDFDYNLPEELIAQTPLLDRSSSRMLVIHN---TEKKYEDKHFYDIVDYLHAGDVLVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L ++ + W +KV+K G I+ F
Sbjct: 61 NNTRVIPARLFGTK----EETGAHVELLLLRQLPDDVWECLVGNAKVVKLGTIISFHD-- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
RL A ++ G + GI + +G +PLPPYI K YQ
Sbjct: 115 --GRLRAECVEIGEKGLRKMRMIYDGI-FNEILDELGNVPLPPYIKEKLND----PERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK++GS AAPTAGLHFT + ++L G+ V VTLHVG TF P+ ED +DH MH
Sbjct: 168 TVYAKVRGSAAAPTAGLHFTDEIFTKLKEKGVTVIDVTLHVGLSTFRPMDTEDVEDHDMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE+ ++ A LN+ K+ G RI ++GTTS+R LE+ G SG T +FI PGY
Sbjct: 228 SEVYYMSKEAADTLNAAKANGQRIFAIGTTSVRTLESVWNRFGKFEECSGETKLFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
++ +D +++NFHLPKSTL+M++++F G E T + Y+HA+ YRF+S+GD L+ +
Sbjct: 288 QWHTIDGMLTNFHLPKSTLIMMIASFVGYEFTLEAYRHAVQEKYRFFSFGDCMLITNE 345
>gi|28897361|ref|NP_796966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus RIMD 2210633]
gi|260364494|ref|ZP_05777115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus K5030]
gi|260876322|ref|ZP_05888677.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AN-5034]
gi|260898593|ref|ZP_05907089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus Peru-466]
gi|31076904|sp|Q87S37|QUEA_VIBPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|28805573|dbj|BAC58850.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus RIMD 2210633]
gi|308086874|gb|EFO36569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus Peru-466]
gi|308093026|gb|EFO42721.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AN-5034]
gi|308114696|gb|EFO52236.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus K5030]
Length = 350
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVAR--HDALFELKFNSDKTVLDILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|269121052|ref|YP_003309229.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Sebaldella
termitidis ATCC 33386]
gi|268614930|gb|ACZ09298.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Sebaldella
termitidis ATCC 33386]
Length = 339
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 199/357 (55%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA + PRD ++LMV+ N VI ++ +L D +V
Sbjct: 1 MKLSDFDFDLPDNLIAQSAMEPRDHSKLMVLEKNKQ---VIEHKKFYNISDYLKKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A+L G + + C L R+ N+W V +P+K +K G L F
Sbjct: 58 VNRTRVIPARLFGKKD-----TGSILECFLLKRIDLNTWEVLLKPAKKLKIGQKLVFL-- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +LEA + + + G +L F G E + +G +PLPPYI + Y
Sbjct: 111 --EGKLEAVLKEVKDDGNRILEFIYEG-NFEEILDELGEMPLPPYITEQLKD----KNRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT+ LL +L G+++ + L VG GTF PV+ E+ +H M
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTNELLEKLKDSGVELTEIYLDVGLGTFRPVQTENILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I +A+ +N K G RI++VGTT++R LE+ + + G T+IFI
Sbjct: 224 HHEKYHIPEESAEIINRAKREGRRIIAVGTTTVRTLES-SNNGAEVISGDGETDIFIYGD 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLPKSTLLML+SAF G Y+ AI YRFYS+GD ++
Sbjct: 283 YKFKIVDALITNFHLPKSTLLMLISAFAGKNFIFTAYETAIQEKYRFYSFGDAMFIY 339
>gi|157376028|ref|YP_001474628.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sediminis HAW-EB3]
gi|157318402|gb|ABV37500.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sediminis HAW-EB3]
Length = 345
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 195/360 (54%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R S+RL+ + N ++D+ +D+ +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMANRTSSRLLSLEGNTG---KLADNQFTDILNMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+
Sbjct: 58 FNNTRVIPARLFGQKI-----TGGKLEILVERMLDDKRILAHVRCSKSPKADSIICLDGD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + S + + VG +PLPPYI RP + D Y
Sbjct: 113 Y-------EMKMLGRHDALFELELQSDKTILEVLEEVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL L G+ FVTLHVGAGTF PVKV++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDALLKALSDKGVDTAFVTLHVGAGTFQPVKVDNILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+++VGTTS+R LE+A +G + + T+IFI P
Sbjct: 224 HSEWAEVSQEVVAKVAQTKANGKRVIAVGTTSVRSLESAAKASEGELKEFCSDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYEFKVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|157961295|ref|YP_001501329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
pealeana ATCC 700345]
gi|189038880|sp|A8H2K7|QUEA_SHEPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157846295|gb|ABV86794.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
pealeana ATCC 700345]
Length = 345
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 200/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ F+LP IA P R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVADYSFELPDELIARYPTAERTASRLLSLDGNSG---QLADLQFTDILEQVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K I+
Sbjct: 58 FNNTRVIPARMFGTKQS-----GGKLEILVERMLDDKRVLAHVRCSKSPKVDSIVCLDGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ + + S + + VG +PLPPYI RP + D Y
Sbjct: 113 Y-------EMVMLARHDALFELSLQSDKTILEVLEEVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L+ L + G+ FVTLHVGAGTF PV+V++ DH M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAILAALKAKGVNTAFVTLHVGAGTFQPVRVDNILDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+RG R+++VGTTS+R LE+A G++ +SG T+IFI P
Sbjct: 224 HSEWAEVPQTVVDLIGETKARGNRVIAVGTTSVRSLESAAKASQGVLQSFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|187931500|ref|YP_001891484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. mediasiatica FSC147]
gi|226713839|sp|B2SG47|QUEA_FRATM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187712409|gb|ACD30706.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Francisella tularensis subsp. mediasiatica FSC147]
Length = 338
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++ S
Sbjct: 58 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVES- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ R + D Y
Sbjct: 112 -----THAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYMK--RDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|254373176|ref|ZP_04988665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida GA99-3549]
gi|151570903|gb|EDN36557.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida GA99-3549]
Length = 340
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+DH +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADHKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVED- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ R + G IPLPPY+ R + D Y
Sbjct: 114 -----TLAKVLDK--DGGMYLLEIQGDKDIYRLMEEFGHIPLPPYMK--RDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K+ GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKANGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|15602097|ref|NP_245169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pasteurella
multocida subsp. multocida str. Pm70]
gi|13431796|sp|P57832|QUEA_PASMU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|12720458|gb|AAK02316.1| QueA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 363
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 136/363 (37%), Positives = 199/363 (54%), Gaps = 17/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ I+ +D+ ++ D ++
Sbjct: 1 MRVSDFYFDLPDELIARYPKPDRTASRLLQLNGENG---EITHRTFADILDQIHEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + +S + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKVEVLVERILSDTRFLAHVRSSKAPKEGAELWLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ ++ + L + L + +G +PLPPYI RP + D
Sbjct: 113 KLGEHHGVKMIMVARHDTLFELEIAQKQTALLDVLQQIGHMPLPPYI--DRPDEEADKER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE +DH
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDALLAQLKAKGVNFAFVTLHVGAGTFQPVRVEQIEDHK 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A E +I P+ T
Sbjct: 231 MHAEYVEVPQEVCDAIIATKQAGKRVIAVGTTSVRSVESAALATEEKGEHALITPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG FR VD L++NFHLP+STL+MLVSAF G T + YQ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKTFRVVDCLITNFHLPESTLIMLVSAFAGYRHTMQAYQSAVENRYRFFSYGDA 350
Query: 354 SLL 356
+
Sbjct: 351 MFI 353
>gi|163742741|ref|ZP_02150126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Phaeobacter
gallaeciensis 2.10]
gi|161383996|gb|EDQ08380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Phaeobacter
gallaeciensis 2.10]
Length = 356
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 162/360 (45%), Positives = 224/360 (62%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA RP PR SARL+V + I D V++L +L S D +V
Sbjct: 1 MKLSDFDFDLPDDRIATRPAVPRSSARLLVAEGDR-----IRDARVANLGQWLRSGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R ++ TL + SW+ +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGPMAAKVEVTLLDPGADGSWAALLKPLKKVKPGEEIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ +++ G+ L F++SG + + ++ G +PLPPYIA KRP D +D
Sbjct: 116 DALSAT------LERVEDGQGHLKFNLSGTDFDAALAEAGAMPLPPYIAAKRPADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDDALLAELQAKGVEISYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 RMHAEWGRVSAEAATEIAATKAAGGRVIPVGTTALRLIESA-GQSGAIQPWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFTFHVADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALAEEYRFFSYGDASLLIP 348
>gi|319639459|ref|ZP_07994209.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa C102]
gi|317399354|gb|EFV80025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa C102]
Length = 342
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 153/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 1 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALP----TLPIEDKHFGDLPDYVAPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKAS-----GGKIEALIERVLDAHTALAHIRSSKSPKPGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ L + + G +PLPPYI R D D Y
Sbjct: 109 --EGDIRAVMLERAEELFYL--KFEGAQTVYELLEQNGHLPLPPYIE--RAADDEDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPAETVAAVEAAKARGNKVWAVGTTSMRALESAACETGRLEAGRGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ YRF+SYGD +L
Sbjct: 283 YRFNVADRLITNFHLPKSTLLMLVSAFSGMEHIRSVYRHAVEQEYRFFSYGDAMIL 338
>gi|238783641|ref|ZP_04627662.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
bercovieri ATCC 43970]
gi|238715519|gb|EEQ07510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
bercovieri ATCC 43970]
Length = 361
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 207/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 6 MRVADFSFELPESLIAHYPQSQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLEPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 63 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKSPKPGTELLLGDD 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 118 ES---IRATMLAR--HDTLFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 171 QTVYSERPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEEHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A TE+G+I P+ G T IFI
Sbjct: 231 HSEYAEVPQQVVDAVLACKARGKRVVAVGTTSVRSLESAAKATENGLIAPFFGDTRIFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 291 PGYEYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 350
>gi|238765174|ref|ZP_04626106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
kristensenii ATCC 33638]
gi|238696608|gb|EEP89393.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
kristensenii ATCC 33638]
Length = 356
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLVPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 ES---IRATMLAR--HDTLFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A +++G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKASDNGLIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYQYQIVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|262165052|ref|ZP_06032789.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus VM223]
gi|262024768|gb|EEY43436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus VM223]
Length = 352
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNGG---QLVDGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESAAQDALKKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVEEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|86138785|ref|ZP_01057357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. MED193]
gi|85824432|gb|EAQ44635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. MED193]
Length = 356
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 163/361 (45%), Positives = 225/361 (62%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V P ++D + DL L D +V
Sbjct: 1 MKLSDFDFDLPDALIATRPATPRSSARLLVA-----TPDQMTDGHIGDLVDLLQPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R R +I TL + SWS +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGRMAAKIEVTLLDPKADGSWSALLKPLKKVKIGETVAFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++ G+ LL F++ G + + ++ G +PLPPYIA KR D +D
Sbjct: 116 D-----ALTAELVGVT-EGQGLLRFNLVGDDFDAALNAAGAMPLPPYIAAKRAADDQDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF +LL+ L + G++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARHSGAVAAPTASLHFDQDLLAVLKAKGVQFTYVTLHVGAGTFLPVKVEDVTSH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A G + PW G T+IFI
Sbjct: 230 KMHAEWGRVSAEAAAEIAATKAAGGRVIPVGTTALRLIESAAR-GGTVQPWEGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F A D LM+NFHLPKSTLLML+SA G + +++Y+HA++ YRF+SYGD SLL
Sbjct: 289 PGFVFHAADALMTNFHLPKSTLLMLISALMGQDRVREIYEHAVNSRYRFFSYGDGSLLLP 348
Query: 359 K 359
+
Sbjct: 349 Q 349
>gi|329894274|ref|ZP_08270160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC3088]
gi|328923205|gb|EGG30527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC3088]
Length = 346
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 137/353 (38%), Positives = 191/353 (54%), Gaps = 13/353 (3%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++ FDLP IA P+ R ++RL+ + N ++ +DL + ND +VFNN
Sbjct: 6 SDYYFDLPEHLIAQHPLPDRSASRLLCLDRNSGA---VNHAQFTDLLELVRPNDLLVFNN 62
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
TKVI A++ G + ++ + VS V+ R S+ K G ++ FS+D
Sbjct: 63 TKVIPARMYGQK-----PTGGQLEILVERIVSSQQALVHMRSSRSPKPGSMVEIFSKDRS 117
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
A + L + + I G +PLPPYI R + D YQT
Sbjct: 118 G--VAGEVSVLGREGALFLVEARDEAITALIERCGHMPLPPYIE--RAEEQADLERYQTV 173
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
YAK +G+VAAPTAGLHFT +L L G++ VTLHVGAGTF PVK +D H MH+E
Sbjct: 174 YAKKEGAVAAPTAGLHFTPEILRALKDKGVEFAEVTLHVGAGTFQPVKEDDIRAHTMHTE 233
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ + + K RGGR+++VGTTS+R LE+A+ +G + G T IFI PGY F
Sbjct: 234 WFEVADEVVKLVEETKQRGGRVIAVGTTSVRSLESASL-NGRLQSMRGDTEIFIYPGYEF 292
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ VD L++NFHLP+STL+MLVSA E Y A+ H YRF+SYGD +
Sbjct: 293 KTVDALITNFHLPESTLIMLVSALADRESVLAAYDEAVRHEYRFFSYGDAMFI 345
>gi|328472615|gb|EGF43478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus 10329]
Length = 350
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 140/363 (38%), Positives = 202/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D S D + S + + +G +PLPPYI RP + D Y
Sbjct: 113 DEYSADMVARHDALFE-----LKFNSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|260427502|ref|ZP_05781481.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citreicella
sp. SE45]
gi|260421994|gb|EEX15245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citreicella
sp. SE45]
Length = 349
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 163/360 (45%), Positives = 224/360 (62%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V + ++D +V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPANPRSSARLLVADGDT-----LTDAVVRDLTQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R + +I TL + W+ +P K +++G+ + F
Sbjct: 56 LNDTKVIPARLSGTRERDGAQGLTRAQIEVTLLEPRADGCWAALVKPLKKLREGETVVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ V++ + G+ LL F++ G + + ++ G +PLPPYIA +R DA+D
Sbjct: 116 DA------LSAVLESRDEGQGLLRFNLVGEDFDAALAEAGAMPLPPYIAARRAADAQDKQ 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWAERKGAVAAPTASLHFDEPLLESLRAHGVAFTKVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + K+ GGR++ VGTT+LRLLETA + G I PW G T+IFI
Sbjct: 230 RMHGEWGEVSDSAAAEIAATKAAGGRVIPVGTTALRLLETAARDTGAIAPWQGVTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G E K++Y HAI+ YRF+SYGD+SLL
Sbjct: 290 PGFTFRVTDALMTNFHLPKSTLMMLVSALMGQERMKRIYDHAITERYRFFSYGDSSLLIP 349
>gi|153001324|ref|YP_001367005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS185]
gi|160875993|ref|YP_001555309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS195]
gi|217972746|ref|YP_002357497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS223]
gi|304411825|ref|ZP_07393436.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS183]
gi|307303407|ref|ZP_07583162.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica BA175]
gi|166216752|sp|A6WQ53|QUEA_SHEB8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038878|sp|A9KUN1|QUEA_SHEB9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764287|sp|B8EDJ6|QUEA_SHEB2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151365942|gb|ABS08942.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS185]
gi|160861515|gb|ABX50049.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS195]
gi|217497881|gb|ACK46074.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS223]
gi|304349685|gb|EFM14092.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS183]
gi|306913767|gb|EFN44189.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica BA175]
gi|315268189|gb|ADT95042.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS678]
Length = 345
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 197/360 (54%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K ++
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSLILL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG +++ LL L VG +PLPPYI RP + D Y
Sbjct: 110 DGGYQMKMVARHDTLFELELLSELTILEVL----EAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V+ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDTILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASQGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|293392578|ref|ZP_06636898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera DSM 4582]
gi|291424980|gb|EFE98189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera DSM 4582]
Length = 356
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 200/360 (55%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P R RL+ + ++ + +DL L + D +V
Sbjct: 1 MRVADFSFDLPESLIARYPQPQRSGCRLLQLDGPTG---KLTHGVFTDLLDQLEAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARIFGRKAS-----GGKIEVLVERVLDDHRVLAHVRASKAPKPGAALLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D D + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 DSIPATMVARHDTLFE-----LRFDDPRDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE ++H+M
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVETIEEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+V+VGTTS+R LE+A ++D I P+ G T IFI
Sbjct: 226 HAEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKASQDAPIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALITNFHLPESTLIMLVSAFAGYQNTMNAYRQAVAEQYRFFSYGDAMFISR 345
>gi|238795574|ref|ZP_04639089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
mollaretii ATCC 43969]
gi|238720693|gb|EEQ12494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
mollaretii ATCC 43969]
Length = 367
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 207/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 6 MRVADFSFELPESLIAHYPQAQRSGCRLLSLDGPTGA---LTHGIFTDLLDKLEPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 63 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKSPKPGTELLLGDD 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 118 ES---IRATMLARHET--LFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ ++H+M
Sbjct: 171 QTVYSERLGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEEHVM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A TE G+I P+ G T IFI
Sbjct: 231 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANATEKGLIAPFFGDTCIFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 291 PGYEYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFITR 350
>gi|148263777|ref|YP_001230483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
uraniireducens Rf4]
gi|189038524|sp|A5GEQ5|QUEA_GEOUR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146397277|gb|ABQ25910.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
uraniireducens Rf4]
Length = 343
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 136/359 (37%), Positives = 203/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA +P RD++RLM + +++ ++S++ A D +V
Sbjct: 1 MQLNDFDYYLPTELIAQQPAQNRDASRLMTLDRVNG---ELNETIISEIAALFRDGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G + + L R+ W + SK K G ++
Sbjct: 58 INDTRVIPARLLGKKES-----GGRVEVFLVRRLLEPGEVWQCLIKASKSPKPGSLIILS 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V+++ + FS ++ +G++PLPPYI R D
Sbjct: 113 EG-----VVARVLERSELDTWAVSFSPV-EGFLDRLERIGSMPLPPYIRRSAGDDD--RE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ +G+VAAPTAGLHFT LL ++ G+++ +TLHVG GTFMPV+V+D DH
Sbjct: 165 RYQTVFARAKGAVAAPTAGLHFTDALLQKIRQQGVEIAPLTLHVGLGTFMPVRVDDLKDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E FI TA+A+N+ K+ GGR+V++GTT+ R LE A +G + P G +IFI
Sbjct: 225 RMHREYYFIPEATARAVNARKNDGGRVVALGTTTTRALEHAAAGNGSVQPGEGEADIFIC 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLPKSTLLMLVSA G + Y A++ +RF+SYGD ++
Sbjct: 285 PGYTFKVVDALITNFHLPKSTLLMLVSALAGKDRLFNAYNEAVNRNFRFFSYGDAMFIY 343
>gi|327483527|gb|AEA77934.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Vibrio
cholerae LMA3894-4]
Length = 351
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 203/363 (55%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RG R+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAITATKARG-RVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 285 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 344
Query: 357 FQK 359
++
Sbjct: 345 RKQ 347
>gi|224457398|ref|ZP_03665871.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis MA00-2987]
gi|254875098|ref|ZP_05247808.1| queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Francisella tularensis subsp. tularensis MA00-2987]
gi|254841097|gb|EET19533.1| queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Francisella tularensis subsp. tularensis MA00-2987]
gi|282159506|gb|ADA78897.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis NE061598]
Length = 338
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 208/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVED- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ R + D Y
Sbjct: 112 -----TLAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYMK--RDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|229846333|ref|ZP_04466441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 7P49H1]
gi|229810426|gb|EEP46144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 7P49H1]
Length = 363
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 137/365 (37%), Positives = 198/365 (54%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHLFLAHIRSSKSPKEGAELFLGED 112
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ K G + + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHGALFEVELSDKSTALLDVLQAIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLQAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKQAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|114764580|ref|ZP_01443784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pelagibaca
bermudensis HTCC2601]
gi|114542956|gb|EAU45976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. HTCC2601]
Length = 349
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 162/360 (45%), Positives = 219/360 (60%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D +V DL +L D +V
Sbjct: 1 MHLSDFDFDLPDELIATRPANPRSSARLLVAEGDT-----ITDAVVRDLTQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R + +I TL W+ +P K +++G+ + F
Sbjct: 56 LNDTKVIPARLSGARTRESAQGVTQAQIEITLLEPRPGGLWAALVKPLKKLREGETVVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ ++ G+ LL F++ G + + ++ G +PLPPYIA KR DA+D
Sbjct: 116 EALSAT------LEAREDGQGLLRFNLEGEDFDAALAEAGAMPLPPYIAAKRAADAQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL+ L + G+ VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVWAERTGAVAAPTASLHFDAGLLAALEAHGVAFTKVTLHVGAGTFLPVKVDDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + K+ GGR++ VGTT+LRLLETA + G I W G T+IFI
Sbjct: 230 KMHGEWGEVSESAAAEIAATKAAGGRVIPVGTTALRLLETAARDSGAIAAWQGVTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G E +Y+HAIS YRF+SYGD+SLL
Sbjct: 290 PGFAFRVTDALMTNFHLPKSTLMMLVSALMGRERMMGIYEHAISERYRFFSYGDSSLLIP 349
>gi|163782315|ref|ZP_02177313.1| queuosine biosynthesis protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159882348|gb|EDP75854.1| queuosine biosynthesis protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 334
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 196/357 (54%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD++LP IA PV PR SARLMV+ I +LP L D +V
Sbjct: 1 MRVEEFDYELPEELIAKYPVVPRHSARLMVLDRGSQS---IKHDTFWNLPDHLEEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + ++ L V P+ W K I+KG +
Sbjct: 58 FNNTKVIPARLYGRK-----PTGGKVEVVLTDYVKPDLWKALV-GGKKIRKGLSIEIAPD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G LE K + + G + + + G IP+PPY+ +R + D Y
Sbjct: 112 FGIEVLEHIEDGK-------FLVRLMGKDPLKLVDRYGHIPIPPYL--RREEEDIDREYY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VA+PTA LHF+ LL +L GI FVTLHV GTF PVK + ++H++
Sbjct: 163 QTIFAEEEGAVASPTASLHFSEELLEKLERKGIGRTFVTLHVSYGTFKPVKTDSVEEHVV 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + T + +++ K RGGR+V+VGTT +R LET+ + G+T ++I PG
Sbjct: 223 EPEYIRVPEETVEKIHNTKERGGRVVAVGTTVVRALETS-----PFKSYEGWTELYIYPG 277
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD L++NFHLP+S+LL LVSAF G E K Y+ A+S YRFYSYGD L+
Sbjct: 278 YEFKVVDALITNFHLPRSSLLFLVSAFGGKEFVLKAYREAVSKEYRFYSYGDGMLIL 334
>gi|163749711|ref|ZP_02156957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
benthica KT99]
gi|161330524|gb|EDQ01482.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
benthica KT99]
Length = 345
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 134/360 (37%), Positives = 196/360 (54%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ F+LP IA P R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVSDYSFELPDELIARYPTAERTASRLLSLDGNTG---QVTDKRFTDILNMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + ++ + + S + R SK K I+
Sbjct: 58 FNNTRVIPARLFGKK-----QTGGKLELLVERMLDDKSILAHVRCSKSPKVDSIICLDGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+I + + +S + + VG +PLPPYI RP + D Y
Sbjct: 113 Y-------EMIMLARHDALFELKLLSDKTILEVLEDVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF + +L L G+ FVTLHVGAGTF PVKV++ +H M
Sbjct: 164 QTVYNKTPGAVAAPTAGLHFDNAMLKALADKGVDAAFVTLHVGAGTFQPVKVDNILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+++VGTTS+R LE+A + + T+IFI P
Sbjct: 224 HSEWAEVTQEVVDKVRQTKANGKRVIAVGTTSVRSLESAAKASSAELEAFCSDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ VD +++NFHLP+STL+ML+SAF G +E K Y+HAI+ YRF+SYGD + +K
Sbjct: 284 GYEFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYRHAIAQKYRFFSYGDAMFVTKK 343
>gi|292491982|ref|YP_003527421.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus halophilus Nc4]
gi|291580577|gb|ADE15034.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus halophilus Nc4]
Length = 350
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 198/357 (55%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P R +RL+ + + D ++LPA L+ D +V
Sbjct: 7 MQLSDFSYDLPERLIAQYPPERRGESRLLFLDGASGA---LRDQRFAELPALLSEGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GV+ ++ + + + + R SK + G L
Sbjct: 64 FNDTQVIPARLLGVKDS-----GGKVEVLIERILDQHRALAHVRASKPPRSGRRLVL--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +E V ++ L L + + VG +PLPPYI +R D Y
Sbjct: 116 --EQSVEVEVGERVADLFELRFLDPRP--LLQLLEAVGRMPLPPYI--RRETTPIDRERY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF LL +L + G+++ +VTLHVGAGTF PV+VE+ +H M
Sbjct: 170 QTVYASRPGAVAAPTAGLHFNGPLLEQLQAQGVELGYVTLHVGAGTFQPVRVENIAEHRM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + + GGR+V+VGTT++R LETA G I P+ G T IFI PG
Sbjct: 230 HAEYVEVPEQVCAQVRETQRLGGRVVAVGTTTVRALETAAA-GGAIAPYQGETEIFIFPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRFRAVD L++NFHLP++TLLMLV AF G + Y+HA+ YRF+SYGD L+
Sbjct: 289 YRFRAVDALITNFHLPETTLLMLVCAFAGRDRVLAAYRHAVKEGYRFFSYGDAMLVT 345
>gi|83954337|ref|ZP_00963057.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. NAS-14.1]
gi|83841374|gb|EAP80544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. NAS-14.1]
Length = 354
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 163/361 (45%), Positives = 223/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR SA+++V + ++D V+++ +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPAVPRTSAKMLVAQGD-----HMTDTTVANMSDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R + I TL W+ +P K +K + + F
Sbjct: 56 LNDTRVIPARLSGLRHRNSVQGPVQARIEVTLLEPRGDADWTALIKPLKKLKIDETVVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A ++ G+ L F+ SG + + ++ G +PLPPYIA KRP DA+D
Sbjct: 116 AD-----LSARLVG-VEDGQGRLRFNCSGDDFDAALNDAGAMPLPPYIAGKRPADAQDMT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF LL +L +G++ VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVFAKNAGAVAAPTASLHFDQLLLDQLAEMGVRFSHVTLHVGAGTFLPVKVDDIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A A +++ K+ GGR++ VGTT+LRL+ETA G I PW G T+IFIT
Sbjct: 230 KMHSEWGQVSAQAAAEISATKAAGGRVIPVGTTALRLVETAARS-GNIQPWEGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTL+MLVSA G + +K+Y HAI YRF+SYGD SLLF
Sbjct: 289 PGFEFNVADALMTNFHLPKSTLMMLVSALMGQKTIQKIYNHAIESNYRFFSYGDASLLFP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|148981302|ref|ZP_01816362.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrionales
bacterium SWAT-3]
gi|145960934|gb|EDK26262.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrionales
bacterium SWAT-3]
Length = 350
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 201/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNNGN---LTDGSFKDVLDLVEPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D EA +I + + + S + ++ VG +PLPPYI RP + D Y
Sbjct: 113 D---EYEAEMIAR--HDALFEIHFTSDQSVLEILNSVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ + + G++ +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDKLMADMKAKGVEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN----PWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRIIAVGTTSVRSLESAAQDALKNGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 NKK 348
>gi|114563868|ref|YP_751382.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
frigidimarina NCIMB 400]
gi|122299212|sp|Q07ZM1|QUEA_SHEFN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114335161|gb|ABI72543.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
frigidimarina NCIMB 400]
Length = 346
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 137/361 (37%), Positives = 201/361 (55%), Gaps = 19/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R+++RL+ + ++D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPTAQRNASRLLTL---SGENSELADKKFTDLFNLINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K ++
Sbjct: 58 FNNTRVIPARLFGQKS-----TGGKLEILVERMLDDKRILAHVRSSKSPKVDTLI----- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + ++ + + L + S + + VG +PLPPYI RP + D Y
Sbjct: 108 DLDGGYQMKMLARHDALFELEL--QSDKTILEVLEDVGHMPLPPYI--DRPDEDTDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L+ L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQTPGAVAAPTAGLHFDDAMLADLKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPWSGFTNIFIT 298
HSE + + K+ G R+V+VGTTS+R LE+A G +SG T+IFI
Sbjct: 224 HSEWANVSQEVVDLIAQTKAAGNRVVAVGTTSVRSLESAARASGDSPLEAFSGDTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ VD +++NFHLP+STL+ML+SAF G E K YQHAI+ YRF+SYGD + +
Sbjct: 284 PGFQFKVVDAMVTNFHLPESTLIMLLSAFAGYEAVMKAYQHAITQKYRFFSYGDAMFVTK 343
Query: 359 K 359
K
Sbjct: 344 K 344
>gi|171464094|ref|YP_001798207.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|238692820|sp|B1XRV8|QUEA_POLNS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|171193632|gb|ACB44593.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 348
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 196/358 (54%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+++LP + IA P+ R +RL+ V + ++ D D+ + + D +V
Sbjct: 1 MQLSDFNYELPAALIAQHPLANRTDSRLLEVKADGLNHALLLDRQFKDILSLVKPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L+G + + + V R SKV+K G I+H +
Sbjct: 61 FNNTKVIPARLHGKKE-----TGGIVELLIERISGEKQTWVQIRASKVLKTGSIVHIHNH 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ T + + + + G +PLPPYI + D D Y
Sbjct: 116 AGE-----TFSVEIIGYDGRFYEVSFPDNVFSLLERFGELPLPPYIEHQ--PDGEDAQRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT AK G+VAAPTAGLHF +L ++ ++G+ VTLHVGAGTF PV+ ED H M
Sbjct: 169 QTVVAKNPGAVAAPTAGLHFDEAILQKIKNLGVNQATVTLHVGAGTFTPVREEDLSKHKM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T QA+ + K GGR+++VGTTSLR LE+ G TN+FITPG
Sbjct: 229 HYEWFSIPNETLQAIEATKENGGRVIAVGTTSLRALESQAASGQSG----GETNLFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+F+ VD L++NFHLPKSTLLMLVSAF G++ + YQHAI YRF+SYGD L +
Sbjct: 285 YQFKTVDCLLTNFHLPKSTLLMLVSAFAGMDHIRAAYQHAIEQKYRFFSYGDAMFLCR 342
>gi|315923966|ref|ZP_07920194.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoramibacter alactolyticus ATCC 23263]
gi|315622806|gb|EFV02759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoramibacter alactolyticus ATCC 23263]
Length = 349
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 139/358 (38%), Positives = 200/358 (55%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++F +DLP IA P RD +RLM ++ I D D+ +LN D +V
Sbjct: 4 LRTEDFYYDLPERLIAQTPAEKRDDSRLMAINRATDA---IEDRHFHDIIDYLNPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A++ G + + L R+ W +P + + G L F+
Sbjct: 61 MNDTKVLPARIFGRK----ADTGARVELLLLTRLDDYRWETMVKPGRKARPGTTLDFYDA 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L T+ + G ++ F G+ E + ++GT+PLPPYI + Y
Sbjct: 117 AGARVLRGTIEKTVDGGLRVIRFEYDGV-FEAILDVIGTMPLPPYIHETLEDQS----RY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + VTLHVG GTF PVK + +H M
Sbjct: 172 QTVYAEHDGSAAAPTAGLHFTDALLGAIAAKGVGLAKVTLHVGIGTFRPVKAANIREHHM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + TA+A+ + K+ GGRI++VGTT++R LE+ A DG I G T+IFI P
Sbjct: 232 HSERYLVPKETAEAIAATKTAGGRIIAVGTTTVRTLESVARDHDGKIVAAGGSTDIFIYP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+ ++ VD L++NFHLP+STLLMLVS+F ++ YQHAI YRF+S+GD L+
Sbjct: 292 GFHWQVVDALITNFHLPESTLLMLVSSFYDRKKILAAYQHAIDENYRFFSFGDAMFLY 349
>gi|310658617|ref|YP_003936338.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sticklandii DSM 519]
gi|308825395|emb|CBH21433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sticklandii]
Length = 341
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 191/357 (53%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ RD +RLM + N + D+ LN ND +V
Sbjct: 1 MKTNDFYFDLPEDLIAQVPLKNRDESRLMTLDKNTG---EVKHKTFRDILECLNDNDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + EI L R N+W +P+K +K G + F
Sbjct: 58 LNNTRVIPARLFGFK----AETNAEIEILLLSRKDINTWEALTKPAKRLKLGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V + G + F GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGLLIGIVKELQEDGIRTIEFEYEGI-FEDVLDRLGNMPLPPYIHEKLED----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT +L L + G+++ +VTLHVG GTF PVK E DH M
Sbjct: 165 QTVYSKVTGSSAAPTAGLHFTPEILLELKNKGVQIEYVTLHVGLGTFRPVKAESIFDHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I LN K G RIV VGTTS+R LE++ ++ SG+T+IFI P
Sbjct: 225 HKEYFEIAEDVKNRLNEAKKNGKRIVCVGTTSVRTLESSANILNNLDRNSGWTDIFIYPS 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD +++NFHLP+STL+M++SAF G Y+ AI YRF+S+GD +F
Sbjct: 285 YEFKFVDAMITNFHLPESTLIMMISAFAGKTYIMDAYEEAIREKYRFFSFGDAMYIF 341
>gi|262172189|ref|ZP_06039867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus MB-451]
gi|261893265|gb|EEY39251.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus MB-451]
Length = 352
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESAAQDALKKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVQQQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|254411962|ref|ZP_05025737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcoleus
chthonoplastes PCC 7420]
gi|196180928|gb|EDX75917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcoleus
chthonoplastes PCC 7420]
Length = 386
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 148/387 (38%), Positives = 202/387 (52%), Gaps = 42/387 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +++DLP RIA P+ PRDS+RL+VV P + DLP L S D +V
Sbjct: 10 LLLSSYNYDLPEGRIAQTPISPRDSSRLLVVE----SPTQHQHRIFRDLPQLLRSGDLLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + + L N W +P + +K G + F
Sbjct: 66 LNNTRVIPARLYGRKV-----TGTPVEVLLLEEREQNCWLALVKPGRRLKVGSTIVFEPD 120
Query: 121 --------------------------DGQSRLEATVI--DKWNTGEILLVFSISGIELER 152
+S L+AT+I D +G +L G L
Sbjct: 121 QPIVPASYGKTPLSSDDTETLRQDNLKNRSPLKATIIARDDATSGRLLQFDLPKGQSLVT 180
Query: 153 QISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
+ G +P PPYI YQT YA+I G+VAAPTAGLHFT LL + G
Sbjct: 181 LLPNYGQVPFPPYITH----SQATPDQYQTVYAQIPGAVAAPTAGLHFTPELLEQCHISG 236
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ +TLHVG GTF PV+VED +H MH E I A T + K+ GGR+++VGTT
Sbjct: 237 IEQASITLHVGVGTFRPVEVEDVTNHQMHGEWLEISAATVAQIQQTKAAGGRVIAVGTTV 296
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LE A +G P+ G T +FI PGY+++ VD L++NFHLP+STLLMLVSA G E
Sbjct: 297 VRALEGAAA-NGEFQPYCGKTELFIYPGYQWQVVDGLITNFHLPRSTLLMLVSALIGRER 355
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
K+Y AI++ YRFYS+GD L+ +
Sbjct: 356 LLKLYAEAIAYNYRFYSFGDAMLILPE 382
>gi|332038774|gb|EGI75216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 343
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 196/360 (54%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ + + + SD+ +N D +V
Sbjct: 1 MRVADFSFDLPDELIARFPKADRTSSRLLTLDGPSGT---LEHKVFSDILDLVNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + + R SK +K G+ +
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKVEVLVERVLDEHRVLAHVRASKSLKVGNEVILEG- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+A I + + + ++ +G +PLPPYI RP D Y
Sbjct: 112 ------KAKAIMVARHDTLFELEFDHSQNVLDILNDIGHMPLPPYI--DRPDTDADRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ L G+ + FVTLHVGAGTF PV+V+ D+H+M
Sbjct: 164 QTVYGEKPGAVAAPTAGLHFDDKLMTALKDKGVNMAFVTLHVGAGTFQPVRVDSVDEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + A+ K+ GGR+++VGTTS+R LE+A G ++ + G T+IFI P
Sbjct: 224 HSEYIEVPDDVVAAVAQTKANGGRVIAVGTTSVRSLESAAKVHGGKLDTYFGDTDIFIFP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +++NFHLP+STL+MLVSAF G + Y AI YRF+SYGD L +K
Sbjct: 284 GYQFNVVDAMVTNFHLPESTLIMLVSAFSGQDNIMGAYNTAIEQQYRFFSYGDAMFLTRK 343
>gi|238752761|ref|ZP_04614230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
rohdei ATCC 43380]
gi|238709019|gb|EEQ01268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
rohdei ATCC 43380]
Length = 356
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 209/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTG---KLTHGIFTDLLDKLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDSRVLAHVKASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 ES---IRATMVARHDT--LFELRFDDERDVFAILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 166 QTVYSERPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEEHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A TE+G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKATENGLIAPFFGDTCIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYDYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVTEQYRFFSYGDAMFISR 345
>gi|120598341|ref|YP_962915.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. W3-18-1]
gi|166217772|sp|A1RI66|QUEA_SHESW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|120558434|gb|ABM24361.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. W3-18-1]
Length = 345
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 198/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTDLLEMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K ++H
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSLIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG +++ LL L VG +PLPPYI RP + D Y
Sbjct: 110 DGGYQMKMVARHDTLFELELLSELTILEVL----EAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V+ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDTIVEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASLGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTKK 343
>gi|329119928|ref|ZP_08248602.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464084|gb|EGF10395.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
bacilliformis ATCC BAA-1200]
Length = 474
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 151/359 (42%), Positives = 210/359 (58%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ +FDF LP IA P R ++RL+V P+ + D + LP + + D V
Sbjct: 131 MLLSDFDFHLPEHLIAQHPPAERGASRLLVALPD----GTLRDETFAFLPQLVRAGDLFV 186
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G +L F
Sbjct: 187 FNNTKVVKARLFGQKES-----GGRIEALIERVLDAHTALAHIRASKSPKPGTVLLF--- 238
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + ++ GE+ + + + + G +PLPPYIAR D Y
Sbjct: 239 --DGGIRAEMTER--AGELFTLRFAGEQSVWQILERHGRLPLPPYIARAAAA--EDEARY 292
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL+ L + G + +TLHVGAGTF PV+ E+ +H M
Sbjct: 293 QTVYAKHQGAVAAPTAGLHFTEALLAELEARGARTAEITLHVGAGTFQPVRTENVAEHKM 352
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A TA+A+ K+ GGR+ +VGTTS+R LE+A G ++ SG T+IF+TPG
Sbjct: 353 HSEWYDIPAETAEAVAETKALGGRVWAVGTTSVRALESAARATGCLSAGSGDTDIFLTPG 412
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
RF D L++NFHLPKSTLLMLVSAF G EE +++Y+HA+ YRF+SYGD +L +K
Sbjct: 413 CRFNVADCLITNFHLPKSTLLMLVSAFAGTEEIRRIYRHAVEREYRFFSYGDAMVLGRK 471
>gi|319941721|ref|ZP_08016043.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sutterella
wadsworthensis 3_1_45B]
gi|319804654|gb|EFW01521.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sutterella
wadsworthensis 3_1_45B]
Length = 349
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 195/359 (54%), Gaps = 16/359 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA P+ R ++RL+ + VI D D+ FL D ++
Sbjct: 5 HLSDFDFELPPELIAQYPLADRAASRLLHI-----TEEVIEDCTFRDIEKFLRPGDLLIA 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + + + R SK K G L F +
Sbjct: 60 NNTRVIKARLLGAKA-----TGGAVEALIERVTGEFTAIAMVRASKSPKPGSKLFFAASG 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ E V + + + + G +PLPPYI + D YQ
Sbjct: 115 TDLKAEVEVTGRAGE----FFELKFAEPVLQVLEAFGRVPLPPYIEHA--PEKADESRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHFT +LL+RL + G+ + +VTLHVGAGTF PV+VE+ +H MH
Sbjct: 169 TVYARHPGAVAAPTAGLHFTDDLLNRLKAKGVDIEYVTLHVGAGTFQPVRVENLSEHHMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + A +N K++G R+++VGTTSLR LE+A G + + T +FI PGY
Sbjct: 229 SEWFSMPEDVAARINEAKAQGRRVIAVGTTSLRTLESAADRIGHVEAGARDTRLFIMPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+FR VD L++NFHLPKSTL+MLVSA G E + Y HA+ YRF+SYGD + + R
Sbjct: 289 KFRIVDALVTNFHLPKSTLVMLVSALVGRERILEAYAHAVREHYRFFSYGDACFIEKAR 347
>gi|329767260|ref|ZP_08258787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans M341]
gi|328836927|gb|EGF86574.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans M341]
Length = 342
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF LP IA P+ RD+++L+ V + SD+ + N D +V
Sbjct: 1 MKLEQFDFYLPEELIAQTPLLKRDTSKLLCVDRKN---NTHEHKVFSDIIDYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L + N W +P+K IK+G I+ F
Sbjct: 58 LNNTRVMPARLYGAK----KDTGAAIEVLLLKNLGHNDWECLVKPAKRIKEGSIVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +EA + G F GI + +++ +GT+PLPPYI + Y
Sbjct: 111 -GDGIMEAVCTKVLDDGFRHFEFVYEGI-FQERLNELGTMPLPPYIKERLTD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL R+ G+ + ++TLHVG GTF PV VE+ +DH M
Sbjct: 165 QTVYSKEVGSSAAPTAGLHFTNELLDRIKEKGVNIAYLTLHVGLGTFRPVAVENIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE +D TA+ +N K GR+ SVGTT+ R LET A +G I SG+TNIFI P
Sbjct: 225 HSEYYTLDEKTAELINKTKENEGRVFSVGTTTTRTLETIARDNNGKIVAASGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+ F+ VD L++NFHLPKS+L+MLVSAF E+ ++Y A+ + YRF+S+GD ++
Sbjct: 285 GFEFKCVDGLITNFHLPKSSLIMLVSAFYDREKVIELYNIAVENKYRFFSFGDAMIII 342
>gi|78222071|ref|YP_383818.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
metallireducens GS-15]
gi|91207424|sp|Q39XD1|QUEA_GEOMG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78193326|gb|ABB31093.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
metallireducens GS-15]
Length = 343
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 136/358 (37%), Positives = 196/358 (54%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LPP IA P+ RD+ RLM V +S ++ D +V
Sbjct: 1 MRVDDFDYELPPELIAQEPLDRRDATRLMTVDRLKGEVGEVS---FREITRLFRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+ GV+ + L R++ W R SK + G +
Sbjct: 58 VNDTRVIPARFFGVKES-----GGRVEVFLERRLAAVGERWQCLLRSSKPSRPGTRIVLA 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A VI + + + F+ + + G +PLPPYI +R D
Sbjct: 113 EG-----VSAEVIGRSDGDTWCVSFTPV-TGFDEWLERNGAMPLPPYI--RRSAADADRE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +++ +G+VAAPTAGLHFT LL L G+++ +TLHVG GTFMP++VE ++H
Sbjct: 165 RYQTVFSRQRGAVAAPTAGLHFTPELLDELRERGVEIATLTLHVGLGTFMPIRVERVEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E I + TA A+N+ K GR++++GTT+ R LE A +DG + +G T IFI
Sbjct: 225 RMHRERYIIPSATADAVNARKGGKGRVIALGTTTCRTLEHAARDDGRVAAGAGETGIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ VD L++NFHLPKSTLLMLVSAF G E + Y A++ +RF+SYGD +
Sbjct: 285 PGYHFKTVDALITNFHLPKSTLLMLVSAFAGKELLFRAYHEAVTRRFRFFSYGDAMFV 342
>gi|260596775|ref|YP_003209346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cronobacter
turicensis z3032]
gi|260215952|emb|CBA28567.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Cronobacter
turicensis z3032]
Length = 356
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 200/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP S IA P R + RL+ + ++ +DL LN D +V
Sbjct: 1 MRLTDFSFDLPESLIAHYPQAQRSACRLLSLDGPTGD---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDHRVLAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + D V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ESVNATMTARHDALFE-----VQFNDERPVLDILNSIGHMPLPPYIE--RPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL RL + GI++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLERLRAKGIEMAFVTLHVGAGTFQPVRVESIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG ++V+VGTTS+R LE+A +D +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNKVVAVGTTSVRSLESAAQAAQDALIAPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYQVIDALVTNFHLPESTLIMLVSAFAGYKHTMNAYREAVKAEYRFFSYGDAMYIT 344
>gi|156935046|ref|YP_001438962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cronobacter
sakazakii ATCC BAA-894]
gi|166216721|sp|A7MEL5|QUEA_ENTS8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|156533300|gb|ABU78126.1| hypothetical protein ESA_02897 [Cronobacter sakazakii ATCC BAA-894]
Length = 356
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 200/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S IA P R + RL+ + ++ +DL LN D +V
Sbjct: 1 MRLTDFSFELPESLIAHYPQAQRSACRLLSLDGPTGD---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDHRVLAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + D V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ESVNATMTARHDALFE-----VQFNDARPVLDILNSIGHMPLPPYIE--RPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL RL + GI++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLERLRAKGIEMAFVTLHVGAGTFQPVRVESIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG ++V+VGTTS+R LE+A +D +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNKVVAVGTTSVRSLESAAQAAQDALIAPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYKHTMNAYREAVKAEYRFFSYGDAMYIT 344
>gi|307129892|ref|YP_003881908.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
dadantii 3937]
gi|306527421|gb|ADM97351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
dadantii 3937]
Length = 355
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQAKRSGCRLLSLDGPTGA---LTHGVFTDLLDKLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SKV K G L
Sbjct: 58 FNNTRVIPARLFGRKVS-----GGKLEVLVERMLDDKRVLAHVRASKVPKPGTELLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + ++ ++ +G +PLPPYI RP +A D Y
Sbjct: 113 ES---VKATMLARHDALFEIQFDDTR--DVLTILNDIGHMPLPPYI--DRPDEAADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVEMAFVTLHVGAGTFQPVRVESIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A + II P+ G T IFI
Sbjct: 226 HAEYTEVPQVVVDAVLACKARGNRVIAVGTTSVRSLESAAQASTGEIIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYR+R VD L++NFHLP+STL+MLVSAF G T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYRYRVVDALVTNFHLPESTLIMLVSAFAGYRHTMTAYQQAVAEQYRFFSYGDAMFITR 345
>gi|56708277|ref|YP_170173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670748|ref|YP_667305.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis FSC198]
gi|254370761|ref|ZP_04986766.1| queuine tRNA-ribosyltransferase [Francisella tularensis subsp.
tularensis FSC033]
gi|81597340|sp|Q5NFL9|QUEA_FRATT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123359436|sp|Q14H21|QUEA_FRAT1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56604769|emb|CAG45848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110321081|emb|CAL09231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis FSC198]
gi|151569004|gb|EDN34658.1| queuine tRNA-ribosyltransferase [Francisella tularensis subsp.
tularensis FSC033]
Length = 340
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 208/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVED- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ R + D Y
Sbjct: 114 -----TLAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYMK--RDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|329123730|ref|ZP_08252290.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
aegyptius ATCC 11116]
gi|327469929|gb|EGF15394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
aegyptius ATCC 11116]
Length = 363
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 136/365 (37%), Positives = 199/365 (54%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLP YI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPLYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|295096812|emb|CBK85902.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 356
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+ + + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IKATMTAR--HDALFEVEFNDERTVLDILNAIGHMPLPPYIE--RPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLEKLRAKGIEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVVAVGTTSVRSLESAAQAAKSELIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKSAVEQKYRFFSYGDAMFIT 344
>gi|260913673|ref|ZP_05920149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pasteurella
dagmatis ATCC 43325]
gi|260632212|gb|EEX50387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pasteurella
dagmatis ATCC 43325]
Length = 363
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 137/365 (37%), Positives = 200/365 (54%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ ++ IS +D+ +N D ++
Sbjct: 1 MRVADFHFDLPDELIARYPKTERKSSRLLQLNGENG---EISHRTFADVIDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + ++ + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKVEVLVERILTDTRFLAHVRSSKAPKEGAELWLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ + + L + L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGVKMTMVARHDTLFELEIAEKQTALLEVLQQIGHMPLPPYI--DRPDEDADQER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE +DH
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLAQLKAKGVNFAFVTLHVGAGTFQPVRVEHIEDHK 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVPQEVCDAIIATKQAGKRVIAVGTTSVRSVESAALATEEKHSARLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG FR VD L++NFHLP+STL+MLVSAF G + T + YQ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKTFRVVDCLITNFHLPESTLIMLVSAFAGYKHTMQAYQSAVENRYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFITK 355
>gi|217967988|ref|YP_002353494.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dictyoglomus turgidum DSM 6724]
gi|217337087|gb|ACK42880.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dictyoglomus turgidum DSM 6724]
Length = 339
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 199/357 (55%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + ++D+ LP IA P PRDS+RLM+V+ I + ++ +L S D +V
Sbjct: 3 LKLSDYDYYLPEELIAQEPAEPRDSSRLMLVNRRTG---EIDITIFREIKNYLKSGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + +I L +V + +P K K G ++F
Sbjct: 60 LNNTKVIPARLYGKKD-----TGAKIEVLLLKKVEEGVYEALVKPGKRAKIGTKIYFSGD 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+++ G +L FS +LE + +G IPLPPYI + Y
Sbjct: 115 -----IYAEVVERKEEGIFVLRFSQ--EDLEEILPEIGNIPLPPYIKKPLND----PNKY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT LL L +GI++ ++TLHVG GTF PV VED H +
Sbjct: 164 QTVYAQKEGAVAAPTAGLHFTEELLHTLQKMGIEILYITLHVGLGTFRPVVVEDITKHKL 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + A+ +N K G R+++VGTT R+LE A G + P +G ++FI PG
Sbjct: 224 DPEYFEVREDVAERINRAKEEGRRVIAVGTTVTRVLE-AQGRSGRVEPGAGLVDLFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ +D L++NFHLPKSTLLMLV+AF G + KK Y AI RFYS+GD ++
Sbjct: 283 FEFKILDGLITNFHLPKSTLLMLVAAFMGYDLMKKAYNRAIEERMRFYSFGDAMFIY 339
>gi|208779883|ref|ZP_03247227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida FTG]
gi|208744338|gb|EDZ90638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida FTG]
Length = 338
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVED- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ R + G IPLPPY+ R + D Y
Sbjct: 112 -----TLAKVLDK--DGGMYLLEIQGDKDIYRLMEEFGHIPLPPYMK--RDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K+ GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKANGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD ++
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIY 338
>gi|119383366|ref|YP_914422.1| queuosine biosynthesis protein [Paracoccus denitrificans PD1222]
gi|119373133|gb|ABL68726.1| Queuosine biosynthesis protein [Paracoccus denitrificans PD1222]
Length = 359
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 169/361 (46%), Positives = 222/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP + IA RP PR SARL++ + I D V DL L S D +V
Sbjct: 9 MKLDDFDFHLPETLIATRPARPRSSARLLLAQGDS-----IRDLHVRDLADLLGSGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+LNG R + E ++ TL V+ W A+P + +K G+++ F
Sbjct: 64 LNDTKVIPARLNGTRARQTPQGEAVAKVEVTLLEPVAHG-WKALAKPLRKLKPGEVIRFG 122
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S L A V + GE+ L F +G + ++ VG +PLPPYIA R D D
Sbjct: 123 -----SALSAEVAEIA-GGELTLRFDATGEAFDAALAQVGAMPLPPYIAALRAPDEADRQ 176
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L + G++ VTLHVGAGTF+PVKVED H
Sbjct: 177 DYQTVWARNSGAVAAPTASLHFDGELLDGLAARGVRFTHVTLHVGAGTFLPVKVEDVTTH 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A A+N+ ++ GGR++ VGTT+LRL+E+A EDG ++P+ G T IFI
Sbjct: 237 KMHGEWGEVTPEAAAAINATRAAGGRVIPVGTTALRLIESAAAEDGTVHPFQGVTEIFIY 296
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR D LM+NFHLPKSTLLMLVSA G + + +Y+HA+ YRF+SYGD SLL
Sbjct: 297 PGYRFRVTDALMTNFHLPKSTLLMLVSALMGQDRIRGIYRHAVESGYRFFSYGDASLLIP 356
Query: 359 K 359
K
Sbjct: 357 K 357
>gi|294140344|ref|YP_003556322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
violacea DSS12]
gi|293326813|dbj|BAJ01544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
violacea DSS12]
Length = 345
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 198/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S+RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVTDFSFELPNELIARYPTPERTSSRLLSLEGNTG---QVTDKQFTDILNMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + ++ + + S + R SK K I+
Sbjct: 58 FNNTRVIPARLFGKK-----QTGGKLELLVERILDDKSILAHVRCSKSPKVDSIVCLDGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+I + + +S + + VG +PLPPYI RP + D Y
Sbjct: 113 Y-------EMIMLARHDALFELKLVSDKTILEVLEEVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF +L L G+ FVTLHVGAGTF PVKV++ +H M
Sbjct: 164 QTVYNKTPGAVAAPTAGLHFDDAILQALADKGVDTAFVTLHVGAGTFQPVKVDNILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+++VGTTS+R LE+A +G + + T+IFI P
Sbjct: 224 HSEWAEVSQDVVDKVIQTKANGKRVIAVGTTSVRSLESAAKASEGALEAFCSDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYKFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|262038069|ref|ZP_06011474.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia goodfellowii F0264]
gi|261747889|gb|EEY35323.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia goodfellowii F0264]
Length = 340
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDFDLP IA V PRD ++L+V++ I ++ +L +D +V
Sbjct: 1 MNIAEFDFDLPEELIAQHAVNPRDHSKLLVLNKEK---KEIEHKRFYNIIDYLKKDDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + + C L R +W V +P+K +K G + F
Sbjct: 58 INRTKVIPARLYGRKD-----TGTVLECFLLKRYDLYTWEVLLKPAKRLKIGQKIVFS-- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ LEA +I+ + G +L F+ G E + +G +PLPPYI K Y
Sbjct: 111 --ENMLEAELIEIKSDGNRVLKFNYKG-NFEEILDKLGEMPLPPYITEKLED----KDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT LL ++ GI + V L VG GTF PV+ E+ +HIM
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTEELLEKIKEKGIIIAEVFLDVGLGTFRPVQTENIHEHIM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ TA+ +N+ K +G R+++VGTTS+R LE++ E G + T+IFI
Sbjct: 224 HSEKYWVPKETAEIVNNAKRKGNRVIAVGTTSVRTLESSVNEKGELIENESETSIFIYGD 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD +++NFHLPKSTL+ML+SAF G E Y+ A+ YRFYS+GD+ ++
Sbjct: 284 YKFKIVDAIITNFHLPKSTLIMLISAFGGKEFVFSAYEEAVREKYRFYSFGDSMFIY 340
>gi|206901815|ref|YP_002251314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dictyoglomus thermophilum H-6-12]
gi|206740918|gb|ACI19976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dictyoglomus thermophilum H-6-12]
Length = 339
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 200/357 (56%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + ++D+ LP IA P PRD++RLM+V+ I+ + ++ +L + D +V
Sbjct: 3 LKLSDYDYYLPEELIAQEPAEPRDTSRLMLVNRKTG---EINITIFREIKNYLKAGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + +I L ++ + +P K K G +HF
Sbjct: 60 LNNTKVIPARLYGKKE-----TGAKIEVLLLKKIGEGKYEALLKPGKRAKIGTKIHFLED 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+++ G +L FS +L++ + +G IPLPPYI + Y
Sbjct: 115 -----IYAEVVERNEEGIFVLKFSQ--EDLDKILPEIGNIPLPPYIKKPIDD----PNKY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT LL L +G+++ ++TLHVG GTF PV VED H +
Sbjct: 164 QTVYAQKEGAVAAPTAGLHFTEELLKTLGEMGVEILYITLHVGLGTFRPVVVEDITKHKL 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + A+ +N K R+++VGTT R+LE A G + P SG ++FI PG
Sbjct: 224 DPEYFEVSDEVAERINKAKEERRRVIAVGTTVTRVLE-AQGRSGKVEPGSGLVDLFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ +D L++NFHLPKSTLLMLV+AF G + KK Y AI RFYS+GD ++
Sbjct: 283 FEFKIIDGLITNFHLPKSTLLMLVAAFMGYDLMKKAYNKAIEERMRFYSFGDAMFIY 339
>gi|126174995|ref|YP_001051144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS155]
gi|166216751|sp|A3D6B2|QUEA_SHEB5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|125998200|gb|ABN62275.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS155]
Length = 345
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 199/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K +
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSFILL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++ + +T + +S + + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYQMKMVARHDTLFE--LELLSELTILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + + + FVTLHVGAGTF PV+V+ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKDVNIAFVTLHVGAGTFQPVRVDTILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASQGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|330721710|gb|EGG99709.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC2047]
Length = 349
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 194/360 (53%), Gaps = 22/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IAL P R ++RL+ V S + SDLP ++ +D IV
Sbjct: 1 MQLSDFHYDLPKELIALYPQDERSASRLLCVDRETGGT---SHRIFSDLPELISPDDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + ++ + NS R SK K G +
Sbjct: 58 FNNTKVMPARLYGHKA-----TGGKVELLIERITDTNSAICQIRASKAPKPGMRISIAEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ + + S L + G +PLPPYI R + D Y
Sbjct: 113 --------VWLEVTGREDSFFLISSGEQPLLMLLDEHGHMPLPPYIE--RDDENFDRERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL R+ +G+ + +VTLHVGAGT+ PV+V+D DH M
Sbjct: 163 QTLFAERPGAVAAPTAGLHFDEPLLQRIREMGVAIGYVTLHVGAGTYQPVRVDDIQDHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA---TTEDG-IINPWSGFTNIF 296
HSE +DA + + + + RGG++++VGTT +R LETA E G + P++G T+IF
Sbjct: 223 HSEYLEVDALVCEQIQACRDRGGKVIAVGTTCVRSLETASMKAREQGLEMAPYAGDTDIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG F VD +++NFHLP+STLLMLVSAF E Y AI YRF+SYGD +
Sbjct: 283 IYPGKDFYCVDAMVTNFHLPESTLLMLVSAFTSREIMLAAYAEAIEERYRFFSYGDAMFI 342
>gi|157363524|ref|YP_001470291.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
lettingae TMO]
gi|157314128|gb|ABV33227.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
lettingae TMO]
Length = 329
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 194/357 (54%), Gaps = 28/357 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA PV PRD++RLM+++ I + D+ +LN D +V
Sbjct: 1 MKVSDFDYILPDELIAQNPVEPRDTSRLMILNRKSRN---IEHRIFRDIVEYLNPEDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L + I L ++ N W+ +P K +K GDIL+F +
Sbjct: 58 LNNTRVIPARLFAKKANST------IEVLLVEKIGTNLWNCMVKPGKKVKPGDILNFET- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A + K + G L F + +L + +G PLPPY+ Y
Sbjct: 111 -----FTAECLSKADQGMRTLKFETTDEDLFK----LGEAPLPPYVH-----SKIPIERY 156
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI G++A+PTAGLHFT LL ++ S G+ + +TLHVG GTF PVK + DH M
Sbjct: 157 QTIYAKINGAIASPTAGLHFTEELLRKIKSTGVTIAEITLHVGIGTFRPVKTQFVQDHKM 216
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T + + K GGR+++ GTT +R LE E GI G T +FI P
Sbjct: 217 HPERYQISQDTVKLVEKTKRSGGRVIATGTTVVRALE----EYGINGKLEGETRLFIYPP 272
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD +++NFHLPKSTLLMLV+AF G + + Y+ AI YRFYS+GD +
Sbjct: 273 FNFKIVDAMITNFHLPKSTLLMLVAAFAGYDFIMEAYREAIEKRYRFYSFGDAMFIT 329
>gi|309972610|gb|ADO95811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Haemophilus influenzae R2846]
Length = 363
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 202/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ IS SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKIDRVSCRLLQLNGENG---EISHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ + + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHDALFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFITK 355
>gi|197118813|ref|YP_002139240.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
bemidjiensis Bem]
gi|226713840|sp|B5EFX9|QUEA_GEOBB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197088173|gb|ACH39444.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
bemidjiensis Bem]
Length = 341
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 203/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD++LPP IA P RD++RL+ + I + V+ + A D +V
Sbjct: 1 MFLSDFDYELPPELIAQHPASRRDASRLLTLDRLSGA---IGEATVASIAAQFLPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G + + L RV P WS + SK K G + F
Sbjct: 58 LNDTRVIPARLHGHKES-----GGAVEIFLVRRVAGEPECWSCLIKASKSPKNGCRVVFP 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ ATV+++ + G+ ++F + + G++PLPPYI R + D
Sbjct: 113 GG-----VTATVLER-DGGDWRVLFE-GSDDFMAWLEQTGSMPLPPYIK--RAPEGEDLE 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ +G+VAAPTAGLHFT +L + G+++ VTLHVG GTFMP++VED +H
Sbjct: 164 RYQTVFAREKGAVAAPTAGLHFTPAILDEIRGRGVEIVSVTLHVGLGTFMPIRVEDLSEH 223
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E+ I TA A+ K RGGR+V++GTTSLR LE A G + +IFI
Sbjct: 224 TMHRELYRIPQETAAAIRRTKERGGRVVALGTTSLRALEHAAAS-GEVAAGEREADIFIL 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRFR VD L++NFHLPKSTL MLV AF G E + Y+ A+S +RF+SYGD +
Sbjct: 283 PGYRFRVVDALITNFHLPKSTLFMLVCAFAGKEAMLEAYREAVSRRFRFFSYGDAMFI 340
>gi|326335244|ref|ZP_08201439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692515|gb|EGD34459.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 349
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 191/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMVVH I L D+ + + D V
Sbjct: 1 MKLSSFNFNLPKELLAEYPSENRDEARLMVVHRKT---EKIEHRLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L + W V P++ I+ G+ L F
Sbjct: 58 LNNTKVFPARLYGHK----EKTNAKIEVFLLRELNKEQRLWDVLVDPARKIRIGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + L A VID + L F G ++ +G PLP YI RP++ D
Sbjct: 113 --DPEEELVAEVIDNTTSRGRTLRFLFDGSYEGFRNKLLELGHTPLPKYI--SRPVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ L+ RL GI +TLH+G GTF PV+VED
Sbjct: 169 EERYQTIYAKYEGAVAAPTAGLHFSKQLMKRLEIKGINFAELTLHIGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +N K G R+ +VGTT +R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEEIIIPQEACDIVNKAKEAGKRVCAVGTTVMRAMESSVSSHNTLNPFIGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G E Y+ A+ Y+F+SYGD L+
Sbjct: 289 IFPPYDFGVANAMITNFHTPKSTLLMMVSAFAGHELIMNAYEEAVKEKYKFFSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|260459151|ref|ZP_05807406.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium opportunistum WSM2075]
gi|259034705|gb|EEW35961.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium opportunistum WSM2075]
Length = 362
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 201/361 (55%), Positives = 252/361 (69%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSA ++VV P + D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFDLPEERIALRPAEPRDSAGMLVVRPG----ETLDDRRVGDLPSLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + ++ TLHMR++P+ W + RP K + GD +HF
Sbjct: 57 FNDTKVIPAQLKGIRRRGEA--QAQVEATLHMRMAPDRWLAFMRPGKRVAAGDRIHFGHD 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 115 GNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L + L + G++ FVTLHVGAGTF+PVK +DT D
Sbjct: 175 ADYQTIYAREEGAVAAPTAGLHFTPELFAALDAKGVERRFVTLHVGAGTFLPVKADDTAD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + A TA+ALN+ K+RGGRI++VGTTSLRLLE+A +DG + WSG T+IFI
Sbjct: 235 HKMHAEIGSVSAATAEALNAAKARGGRIIAVGTTSLRLLESAARDDGTLAAWSGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR D+LM+NFHLP+STL MLVSAF G+E + Y HAI+ YRFYSYGD SLL+
Sbjct: 295 TPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLETMRAAYAHAIAERYRFYSYGDASLLY 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|241668246|ref|ZP_04755824.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254876780|ref|ZP_05249490.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254842801|gb|EET21215.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 338
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 208/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I DH +D F+N D ++
Sbjct: 1 MRTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EILDHKFTDFIDFINPEDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGEK-----TTGAKLEYLIERVKTPKIFETHIKANRSPAIGSEIYVQD- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V++K G + L+ ++ + + G IPLPPY+ R + D Y
Sbjct: 112 -----TLAKVLEK--DGGMYLLELQGNKDIYQLMEEFGHIPLPPYMK--RDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF+ L+ ++ + G + ++TLHVG+GTF PV+V+D ++H M
Sbjct: 163 QTVYAKDLGSVAAPTAGLHFSEELMQQIKAKGTDIAYITLHVGSGTFKPVQVDDVNNHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + + + K+ GGR++++GTTS+R LETA + G I P+ G T+IF+ PG
Sbjct: 223 HSEVISVSEDVCEKIRQTKANGGRVIAIGTTSVRSLETA-GQSGEIQPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNIVDAMITNFHLPKSTLIMLVSAFADKEKIMKAYEHAIAEKYRFFSYGDAMFIF 338
>gi|119775329|ref|YP_928069.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
amazonensis SB2B]
gi|166216750|sp|A1S7P3|QUEA_SHEAM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|119767829|gb|ABM00400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
amazonensis SB2B]
Length = 345
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 131/360 (36%), Positives = 200/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + ++D +D+ A + D ++
Sbjct: 1 MRVADFTFDLPDELIARYPMAERTASRLLHLDGSTGA---LADRQFTDILALIEPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKPGAEIILDGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + + + VG +PLPPYI RP + D Y
Sbjct: 113 -------FKMTMDARHDALFELSLKDDKTILEVLEAVGHMPLPPYI--DRPDEDTDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF ++L+ L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNERPGAVAAPTAGLHFDESILAALKAKGVDMAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + A + + + K+ G R+++VGTTS+R LE+A +G + P+ G T+IFI P
Sbjct: 224 HSEWAEVPADVVEKIRATKAAGKRVIAVGTTSVRSLESAAKASEGELEPFCGDTDIFIFP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
G+ F+ VD +++NFHLP+STL+MLVSAF G +E Y+HA+ YRF+SYGD + +K
Sbjct: 284 GFEFKVVDAMVTNFHLPESTLIMLVSAFAGFDEVIGAYRHAVEQKYRFFSYGDAMFVTKK 343
>gi|126662382|ref|ZP_01733381.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteria bacterium BAL38]
gi|126625761|gb|EAZ96450.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteria bacterium BAL38]
Length = 349
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 196/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +A P RD +RLMVV+ I L D+ + + D +V
Sbjct: 1 MKLSHFQFNLPEELLAEFPTENRDESRLMVVNRKTGT---IEHKLFKDVIDYFDDGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E ++ +G P+P YI R+ +
Sbjct: 114 DDDS---LVAEVIDNTTSRGRTLRFLYDGSYEEFREKLVELGETPIPKYINREVTPEDA- 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK++G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF PV+VED
Sbjct: 170 -ERYQTIYAKVEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +N+ K++ ++ VGTT++R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEEMKISQEACDIINNAKTKKKKVCCVGTTAMRAMESSVSSQRTLNPFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D +++NFH PKSTLLM++SAFCG + KK Y+ A+ YRFYSYGD L+
Sbjct: 289 IYPPYDFSLADAMITNFHTPKSTLLMMISAFCGHDLMKKAYEEAVKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|167627673|ref|YP_001678173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|189038523|sp|B0TYS6|QUEA_FRAP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167597674|gb|ABZ87672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 338
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 133/357 (37%), Positives = 208/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I DH +D F+N D ++
Sbjct: 1 MRTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EILDHKFTDFIDFINPEDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGEKI-----TGAKLEYLIERVKTPKIFETHIKANRSPAIGSEIYVQD- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A +++K G + L+ ++ + + G IPLPPY+ R + D Y
Sbjct: 112 -----TLAKILEK--DGGMYLLELQGNKDIYQLMEEFGHIPLPPYMK--RDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF+ L+ ++ + G + ++TLHVG+GTF PV+V+D ++H M
Sbjct: 163 QTVYAKDLGSVAAPTAGLHFSEELMQQIKAKGTDIAYITLHVGSGTFKPVQVDDVNNHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + + + K+ GGR++++GTTS+R LETA + G I P+ G T+IF+ PG
Sbjct: 223 HSEVISVSEDVCEKIRQTKANGGRVIAIGTTSVRSLETA-GQSGEIQPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNIVDAMITNFHLPKSTLIMLVSAFADKEKIMKAYEHAIAEKYRFFSYGDAMFIF 338
>gi|228473602|ref|ZP_04058354.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga gingivalis ATCC 33624]
gi|228274974|gb|EEK13784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga gingivalis ATCC 33624]
Length = 349
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 192/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMVVH I L D+ + + D V
Sbjct: 1 MKLSSFNFNLPKELLAEYPSENRDEARLMVVHRKTG---EIEHRLFKDVIEYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L + W V P++ I+ G+ L F
Sbjct: 58 LNNTKVFPARLYGHK----EKTNAKIEVFLLRELNKEQRLWDVLVDPARKIRIGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + L A VID + L F G ++ +G PLP YI RP++ D
Sbjct: 113 --DPEEELVAEVIDNTTSRGRTLRFLFDGSYEGFRNKLLELGHTPLPKYI--SRPVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ L+ RL GI +TLH+G GTF PV+VED
Sbjct: 169 EERYQTIYAKYEGAVAAPTAGLHFSKQLMKRLEIKGINFAELTLHIGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I Q +N K G R+ +VGTT +R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEEIIIPQEACQVVNKAKEAGKRVCAVGTTVMRAMESSVSSHNTLNPFIGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G E Y+ A+ Y+F+SYGD L+
Sbjct: 289 IFPPYDFGVANAMITNFHTPKSTLLMMVSAFAGHELIMDAYEEAVKEKYKFFSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|260582870|ref|ZP_05850655.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae NT127]
gi|260094083|gb|EEW77986.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae NT127]
Length = 363
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 201/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTHVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMTARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|68248853|ref|YP_247965.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 86-028NP]
gi|81336732|sp|Q4QNU2|QUEA_HAEI8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|68057052|gb|AAX87305.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 86-028NP]
Length = 363
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 201/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDQGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTHVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDKNLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|229844948|ref|ZP_04465085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 6P18H1]
gi|229812082|gb|EEP47774.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 6P18H1]
Length = 363
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 136/365 (37%), Positives = 200/365 (54%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGGKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFITK 355
>gi|253700404|ref|YP_003021593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
sp. M21]
gi|251775254|gb|ACT17835.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. M21]
Length = 341
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD++LPP IA P RD++RL+ + + V+ + A D +V
Sbjct: 1 MFLSDFDYELPPELIAQHPASRRDASRLLTLDRSNGAVGE---ATVASIAAQFLPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+LNG + EI + P WS + SK K G +
Sbjct: 58 LNDTRVIPARLNGHKESGGAV---EIFLVRRVPGDPECWSCLIKASKSPKNGCRVLLPGG 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ATV+++ + G+ ++F + + G++PLPPYI R + D Y
Sbjct: 115 -----VTATVLER-DGGDWRVLFE-GSDDFMGWLEATGSMPLPPYIK--RNPEGEDLERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +L + G+++ VTLHVG GTFMP++VED +H M
Sbjct: 166 QTVFAREKGAVAAPTAGLHFTPEILDEIRGRGVEIVSVTLHVGLGTFMPIRVEDLSEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E+ I TA A+ K RGGR+V++GTTSLR LE A G + +IFI PG
Sbjct: 226 HRELYRIPRETAAAIRRTKERGGRVVALGTTSLRALEHAAAS-GEVAAGEREADIFILPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLPKSTL MLV AF G E + Y+ A+S +RF+SYGD +
Sbjct: 285 YRFRVVDALITNFHLPKSTLFMLVCAFAGKEAVLEAYREAVSRRFRFFSYGDAMFI 340
>gi|307297287|ref|ZP_07577093.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermotogales bacterium mesG1.Ag.4.2]
gi|306916547|gb|EFN46929.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermotogales bacterium mesG1.Ag.4.2]
Length = 336
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 138/357 (38%), Positives = 197/357 (55%), Gaps = 21/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DF+LP IA +P PRDS+RL+V+ + +++ FL+ D +V
Sbjct: 1 MKVSDYDFELPEELIAQKPAIPRDSSRLLVIDRET---YSFEHRVFAEIEDFLHPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + ++ L ++ W RP IK G++L F
Sbjct: 58 LNNSRVIPARLLGKKE-----TGAKVEAVLTEKLGGGLWKAIVRPGSKIKPGNVLLF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+++ VI+ + +L F G + + G + +PPY+ + Y
Sbjct: 110 ---NKISCKVIEHCDDSSRILDF---GSVTDEDVKKAGLLAIPPYVKYY----PDNPESY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GSVAAPTAGLHFT LL RL + V F+TLHVG GTF PVK E D H M
Sbjct: 160 QTVYSRPEGSVAAPTAGLHFTDTLLERLRKKDVDVQFITLHVGIGTFRPVKSETVDGHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + A+ L ++ RIV+VGTT++R LE+ G I SG T+IFI P
Sbjct: 220 HNEFFSVSSEVAERLERARTEKRRIVAVGTTTVRTLESIVARHGCIVGDSGHTDIFIYPP 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+A D L++NFHLP+STLLMLVSAF G E Y+ AI YRF+S+GD L+
Sbjct: 280 YTFKATDSLITNFHLPRSTLLMLVSAFAGRELILSAYREAILKRYRFFSFGDACLIL 336
>gi|258512074|ref|YP_003185508.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257478800|gb|ACV59119.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 355
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 208/361 (57%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FD++LP IA +P+ RD +RL+ V+ + +++ LN D +V
Sbjct: 1 MRVEDFDYELPEHLIAQQPLPERDQSRLL---VVDPVDRVVRHRIFAEIVEELNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
N+++V+ A+L+ + + L V PN+W ARP+K ++ G L
Sbjct: 58 MNDSRVLPARLHAFKP----DTGGHVELLLVRPVDDQPNTWQCLARPAKRVRAGHRLVVG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
DG R+E V+ + + G L+ F + + +G +PLPPYI K
Sbjct: 114 EGDG--RVEMEVVGEEDEGIRLVRFH-TNESVIDVAHRLGEMPLPPYIHEKLEDQ----E 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GSVAAPTAGLHFT LL +L G+++ VTLHVG GTF PV+VE+ ++H
Sbjct: 167 RYQTVYAKRVGSVAAPTAGLHFTERLLQKLRDKGVQLCHVTLHVGIGTFRPVQVENVEEH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + TA+ +N KS G +++VGTT+LR LE A + G++ G T+IFI
Sbjct: 227 RMHSEWYEVSPETAEMVNQAKSEGRPVIAVGTTALRTLEAA-GQSGVLEAKQGETDIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F +D L++NFHLPKSTL MLV A G + K +Y+ A+ +YRF+S+GD + +
Sbjct: 286 PGFKFHIMDGLITNFHLPKSTLFMLVCAIMGTDYAKAVYREAVERSYRFFSFGDAMFIKR 345
Query: 359 K 359
+
Sbjct: 346 R 346
>gi|85711767|ref|ZP_01042823.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
baltica OS145]
gi|85694382|gb|EAQ32324.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
baltica OS145]
Length = 349
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 131/359 (36%), Positives = 200/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +F FDLP IA P R ++R++ L+ I +D+ L + D +V
Sbjct: 8 LKVSDFSFDLPDELIARYPQQQRTASRML---RVLAQQNRIEHGQFTDIVDQLEAGDLLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + + R ++ K G
Sbjct: 65 FNDTRVIPARLLGEKTS-----GGKVEVLVERMLDDSRVLAHVRANRAPKPGAEFLL--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + + + G +PLPPYI RP + D Y
Sbjct: 117 --EGAVKATMLARHDA--LFELEFNHQETVLELLEAHGHMPLPPYI--DRPDEESDKERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L +L G++ +VTLHVGAGTF PV+V+ ++H+M
Sbjct: 171 QTVYNREPGAVAAPTAGLHFDDAILQQLKDKGVEFGYVTLHVGAGTFQPVRVDSIEEHVM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE +D + + VK G R+++VGTTS+R LE+A D +I P+ T+IFI P
Sbjct: 231 HSEYAKVDTKVCEQIKKVKQAGKRVIAVGTTSVRSLESAAQATDELIAPFFDDTDIFIYP 290
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY F+ +D L++NFHLP+STL+MLVSAF G E YQ AI YRF+SYGD+ L+ +
Sbjct: 291 GYEFKVIDGLVTNFHLPESTLIMLVSAFAGKELIMNAYQQAIDEKYRFFSYGDSMLILR 349
>gi|253583344|ref|ZP_04860542.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium varium ATCC 27725]
gi|251833916|gb|EES62479.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium varium ATCC 27725]
Length = 343
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 135/356 (37%), Positives = 196/356 (55%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D++LP I +P PRD ARLM+V+ I ++ +LN D +V
Sbjct: 4 LLSDYDYNLPEELIGQQPREPRDHARLMLVNRKN---ESIEHKKFYEIIDYLNEGDILVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + L R+ ++W +P+K +K G L
Sbjct: 61 NSTKVIPARLFGHKE-----TGGVLEILLIKRIDLDTWECLLKPAKKLKIGQKLFIGHG- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L +++ + G ++ F+ G E + +G +PLPPYI ++ YQ
Sbjct: 115 --NELIGELLEIKDDGNRIIKFTYEG-AFEEVLDRLGKMPLPPYIVEA----LKEKDRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA SVAAPTAGLHFT LL ++ GIK+ + L VG GTF PV+ E+ +H MH
Sbjct: 168 TVYAIKGESVAAPTAGLHFTKELLEKIEKKGIKIVDIFLEVGLGTFRPVQTENVLEHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E+ I A +N K G RI+SVGTTS R LE+A E+G++ G T IFI PGY
Sbjct: 228 EEVFEIPQEAADIINEGKRNGRRIISVGTTSTRALESAVDENGMVKAQKGSTEIFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F+ +D L++NFHLPKSTLLMLVSA E K+Y A+ Y F+S+GD ++
Sbjct: 288 KFKVIDALITNFHLPKSTLLMLVSALSSREFMLKVYDIAVKEEYHFFSFGDAMFIY 343
>gi|51595277|ref|YP_069468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis IP 32953]
gi|186894294|ref|YP_001871406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis PB1/+]
gi|81640225|sp|Q66DW6|QUEA_YERPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238691412|sp|B2K6S5|QUEA_YERPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51588559|emb|CAH20167.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Yersinia pseudotuberculosis IP 32953]
gi|186697320|gb|ACC87949.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Yersinia
pseudotuberculosis PB1/+]
Length = 356
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 ES---IRATMLAR--HDTLFELCFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|146293581|ref|YP_001184005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
putrefaciens CN-32]
gi|166217770|sp|A4Y8C3|QUEA_SHEPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145565271|gb|ABP76206.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
putrefaciens CN-32]
gi|319426880|gb|ADV54954.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
putrefaciens 200]
Length = 345
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 203/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D ++L +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTELLEMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K ++H
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSLIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++ + +T + +S + + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYQMKMVARHDTLFE--LELLSELTILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASLGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTKK 343
>gi|325955528|ref|YP_004239188.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weeksella
virosa DSM 16922]
gi|323438146|gb|ADX68610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weeksella
virosa DSM 16922]
Length = 351
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 146/361 (40%), Positives = 197/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP +A RP RD ARLMV+H + I L DL + + D ++
Sbjct: 3 MKTSDFDFKLPDELLAERPSEHRDEARLMVIHRDTG---KIEHRLFKDLIEYFDEGDVMI 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L + P W V P++ I+ G+ L F
Sbjct: 60 RNNTKVFPARLMGNK----EKTGAKIEVFLLRELDPETRLWDVLVDPARKIRIGNKLFF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + L F G E ++ +G PLP YI R D D
Sbjct: 115 --DEDDTLVAEVVDNTTSRGRTLRFLFDGSYEEFRIKLKEIGDTPLPKYIK--RDADEED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL G+ VTLH+G GTFMPV+VED
Sbjct: 171 AERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEVTLHIGLGTFMPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +A +N R+ ++GTTS+R +E++ + DG +N ++G+TN F
Sbjct: 231 KHKMESEQVIIPQESADLVNKAIDAKKRVCAIGTTSMRSIESSVSADGHLNAFNGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM++SAF G E K Y AI Y+FYSYGD L+
Sbjct: 291 IYPPYDFSIANCMVTNFHTPKSTLLMMISAFAGHELIMKAYDEAIKEGYKFYSYGDAMLI 350
Query: 357 F 357
Sbjct: 351 L 351
>gi|290474706|ref|YP_003467586.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Xenorhabdus bovienii SS-2004]
gi|289174019|emb|CBJ80806.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Xenorhabdus bovienii SS-2004]
Length = 355
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 134/360 (37%), Positives = 204/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + ++ + +D+ L + D +V
Sbjct: 1 MRVADFTFELPEELIAHYPQPQRSGCRLLALDGKTGG---LTHGIFTDVLDKLEAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK +K+G L
Sbjct: 58 FNNTRVIPARLFGRKA-----TGGKLEVLVERMLDNKRVLAHVRASKALKEGAELLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ + +G +PLPPYI RP + D Y
Sbjct: 113 ES---IRATMLAR--HDTLFEIRFDDDRDVLTILDEIGHMPLPPYI--ARPDEESDRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+ + FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSERPGAVAAPTAGLHFDEPLLAALREKGVDMAFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG ++V+VGTTS+R LE+A ++G+I P+ T IFI
Sbjct: 226 HAEYAEVPQNVVDAVLACKARGNKVVAVGTTSVRSLESAARACQNGLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ ++ VD L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD + +
Sbjct: 286 PGFEYQVVDALITNFHLPESTLIMLVSAFAGYQNTMNAYKEAVAEKYRFFSYGDAMFIHR 345
>gi|307153956|ref|YP_003889340.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7822]
gi|306984184|gb|ADN16065.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7822]
Length = 365
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 146/369 (39%), Positives = 198/369 (53%), Gaps = 25/369 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++LP IA PV PRD +RL++V P + + +LP +L D +VF
Sbjct: 6 LLSSYDYELPLDLIAQNPVVPRDMSRLLIVD----TPASHTHSIFRELPKWLLPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + I L S W +P K K G L F+
Sbjct: 62 NNTRVIPARLYGCKS-----TGAPIEILLLEPKSNGCWLALVKPGKRFKVGSELWFYPPS 116
Query: 122 GQSR-----LEATVIDK--WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ L+A V+D+ G IL + + +G +PLPPYI
Sbjct: 117 ANPKNPEIFLKAKVLDRDEATGGRILQFLWDNDQSFWELLEKIGQVPLPPYITS----SD 172
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YAK G+VAAPTAGLHFT LL L SIGI ++TLHVG GTF PV+ ED
Sbjct: 173 AKSSQYQTVYAKELGAVAAPTAGLHFTDELLKSLQSIGIDQAWITLHVGVGTFRPVEKED 232
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PW 289
H MH+E + + T + K+RGGR+++VGTT +R LE A E P+
Sbjct: 233 ITQHQMHTEWLEVPSATVTKIQETKARGGRVIAVGTTVVRALEGAAKETQAPESEYLLPF 292
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T++FI PGYR+R +D +++NFHLPKS+LLMLVSA G E ++Y AI YRFYS
Sbjct: 293 QGRTDLFIYPGYRWRVIDGMITNFHLPKSSLLMLVSALIGRERLLELYHQAIQEKYRFYS 352
Query: 350 YGDTSLLFQ 358
+GD L+
Sbjct: 353 FGDAMLILP 361
>gi|114771126|ref|ZP_01448566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [alpha
proteobacterium HTCC2255]
gi|114548408|gb|EAU51294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [alpha
proteobacterium HTCC2255]
Length = 348
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 172/360 (47%), Positives = 229/360 (63%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IALRPV PR S++L+V S I D +L +L D +V
Sbjct: 1 MKLSDFDFELPNELIALRPVHPRSSSKLLV-----SKDDKIIDDQFLNLLKYLKKGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R H R I L + W A+P+K + G+I++F
Sbjct: 56 LNDTKVIPAKLHGKRIRHSDNGRTTANIGINLLSTNNDGHWLALAKPAKRVNVGEIINF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A V+DK + G +L F++S ++++ +GT+PLPPYIA +R D D
Sbjct: 115 ----DNELTAKVLDKSSNGL-VLQFNLSEEIFDQKLKEIGTMPLPPYIASQRLPDKFDDN 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ GSVAAPTA LHF LL +L GIK VTLHVGAGTF+PVKV++ DH
Sbjct: 170 DYQTVFAEKSGSVAAPTASLHFDDVLLKQLNDFGIKTSKVTLHVGAGTFLPVKVDNIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G ++ A + KS GGRI+ VGTT+LRL+ETA + G IN W+G T+IFIT
Sbjct: 230 KMHSEWGEVNNIAASEIAKTKSEGGRIIPVGTTALRLIETAA-KSGKINSWTGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ D L++NFHLPKSTLLMLVSA G E+ K +Y HAI++ YRF+SYGD SLL
Sbjct: 289 PGFKFKIADGLITNFHLPKSTLLMLVSALIGTEKLKNVYLHAINNRYRFFSYGDASLLLP 348
>gi|301025763|ref|ZP_07189277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 196-1]
gi|299879990|gb|EFI88201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 196-1]
Length = 356
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 205/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+I + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---INATMIAR--HGALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|319775882|ref|YP_004138370.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3047]
gi|317450473|emb|CBY86690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3047]
Length = 363
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 135/365 (36%), Positives = 199/365 (54%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+F+LP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFNLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLP YI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPLYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|227358143|ref|ZP_03842484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis ATCC 29906]
gi|227161479|gb|EEI46516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis ATCC 29906]
Length = 357
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P R RL+ + +S + +D+ LN+ D +V
Sbjct: 1 MRVSDFRFDLPESLIAHYPHPQRSGCRLLSLEGKTGN---LSHGVFTDVLDKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARIYGRKAS-----GGKIEVLVERMLDEHRVLAHVRASKSPKEGASLILGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+I + + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---VQATMIAR--HDTLFEIRFDDERDVLTILNSIGHMPLPPYI--DRPDERSDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL L + G+++ FVTLHVGAGTF PV+V++ ++H M
Sbjct: 166 QTVYNERPGAVAAPTAGLHFDEPLLEALRNKGVEMAFVTLHVGAGTFQPVRVDNIEEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKAAKDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD + +
Sbjct: 286 PGYQYQVIDALITNFHLPESTLIMLVSAFAGYKNTMNAYNVAVEQKYRFFSYGDAMFITR 345
>gi|238020815|ref|ZP_04601241.1| hypothetical protein GCWU000324_00705 [Kingella oralis ATCC 51147]
gi|237867795|gb|EEP68801.1| hypothetical protein GCWU000324_00705 [Kingella oralis ATCC 51147]
Length = 340
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 214/360 (59%), Gaps = 21/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R ++RL+V P+ +D +DLP+++N+ D +V
Sbjct: 1 MQLSDFDFTLPEHLIAQNPPATRGNSRLLVALPD----APFTDKQFADLPSYINAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMRARLFGQKAS-----GGKIEALIERVLDAHTALAHIRSSKSPKAGAALIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ AT++++ + L +G E + + G +PLPPYI R DA D
Sbjct: 109 --DGDIHATMLERADE---LFKIQFAGEETVYELLERHGKLPLPPYI--VRAADADDDER 161
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT LL L + G++ VTLHVGAGTF PV+V++ +H
Sbjct: 162 YQTVYAKFQGAVAAPTAGLHFTDALLGSLKAKGVEFAEVTLHVGAGTFQPVRVDNIAEHK 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A T + + K RG ++ SVGTTSLR +E+A G + G T+IFITP
Sbjct: 222 MHSEWFDVPADTVAKIAAAKQRGSKVWSVGTTSLRAIESAARS-GSLKAGQGDTDIFITP 280
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
G+ F+ +D L++NFHLPKSTLLMLVSAF G ++ + +Y+HA+ YRF+SYGD +L ++
Sbjct: 281 GFSFQVIDRLITNFHLPKSTLLMLVSAFSGCDKIRAVYRHAVEQEYRFFSYGDAMILGRE 340
>gi|238759998|ref|ZP_04621150.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
aldovae ATCC 35236]
gi|238701751|gb|EEP94316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
aldovae ATCC 35236]
Length = 375
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 20 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLLPGDLLV 76
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 77 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 131
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 132 ES---IQATMLAR--HDTLFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 184
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 185 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEEHIM 244
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A T++G+I P+ G T IFI
Sbjct: 245 HSEYAEVPQDVVDAVLACKARGNRVVAVGTTSVRSLESAAKATDNGLIAPFFGDTKIFIY 304
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 305 PGYHYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 364
>gi|301154782|emb|CBW14245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parainfluenzae T3T1]
Length = 363
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 195/365 (53%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S RL+ ++ IS +D+ ++ D ++
Sbjct: 1 MRVSDFHFDLPDELIARYPKEDRSSCRLLQLNGENG---EISHRTFTDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERVLSEHHFLAHIRSSKAPKEGAELFLGED 112
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
I + + + + + +G +PLPPYI RP + D
Sbjct: 113 KLGENKGVEAIMIGRQDTLFEVELADKSRNVLDVLQEIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DHI
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLQKLHEKGVNFEFVTLHVGAGTFQPVRVENIEDHI 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGII---NPWSGFT 293
MH+E + A+ K G R+++VGTTS+R +ETA E+G P+ T
Sbjct: 231 MHAEYVELSQEVCNAIIETKKAGKRVIAVGTTSVRSVETAALSAEENGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKSFRVVDALITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFITK 355
>gi|289665553|ref|ZP_06487134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. vasculorum NCPPB702]
gi|289667763|ref|ZP_06488838.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 356
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 140/364 (38%), Positives = 204/364 (56%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP IA P+ R ++RL+VV P+ P ++D V DLP L D ++
Sbjct: 1 MKKSDFNYSLPEELIAQAPLAERAASRLLVVPPS---PQALADRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGEREARVQIGASKSPKAGSLIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE + G +PLPPYI R+ ++ Y
Sbjct: 113 GQAEVL-------GRDGEFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVED--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL++L G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLAQLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYDHAIAQRYRFFSYGDAML 343
Query: 356 LFQK 359
L+ +
Sbjct: 344 LWSR 347
>gi|153947233|ref|YP_001402084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis IP 31758]
gi|167016409|sp|A7FLF6|QUEA_YERP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152958728|gb|ABS46189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis IP 31758]
Length = 356
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---NIRATMLAR--HDTLFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|308050488|ref|YP_003914054.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Ferrimonas
balearica DSM 9799]
gi|307632678|gb|ADN76980.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Ferrimonas
balearica DSM 9799]
Length = 352
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 201/363 (55%), Gaps = 21/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R ++RL+ + + + D DL + D +V
Sbjct: 1 MQVADFDFDLPDELIARYPTQERTASRLLHLDGDTGA---LHDGQFPDLLELVRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L+G + +I + + + R SK K G L F
Sbjct: 58 FNNTRVIPARLHGQKAS-----GGKIEVLVERVLDSERVLAHVRSSKSPKPGTELQF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ AT++ + + + + + +G +PLPPYI RP + D Y
Sbjct: 110 --DDGVTATMVAR--HDALFELAFHGNDTVLNILDRIGHMPLPPYI--DRPDENSDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF ++L+RL G++ +VTLHVGAGTF PV+V+ +DH M
Sbjct: 164 QTVYNQRPGAVAAPTAGLHFDESMLARLKEKGVETAYVTLHVGAGTFQPVRVDKVEDHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN----PWSGFTNIF 296
HSE + + +A+ ++RGGR+++VGTTS+R LE+A P++ T+IF
Sbjct: 224 HSEFAEVGSDVVEAVKRTRARGGRVIAVGTTSVRSLESAARAAREHGEVLAPYAQETDIF 283
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG F VD +++NFHLP+STL+MLVSAF G + YQHA++ YRF+SYGD +
Sbjct: 284 LYPGCEFLLVDAMITNFHLPESTLIMLVSAFAGQDHVMNAYQHAVAQKYRFFSYGDAMFV 343
Query: 357 FQK 359
++
Sbjct: 344 TRQ 346
>gi|215485486|ref|YP_002327917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O127:H6 str. E2348/69]
gi|312964573|ref|ZP_07778829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 2362-75]
gi|254764275|sp|B7UJM8|QUEA_ECO27 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|215263558|emb|CAS07888.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Escherichia coli O127:H6 str. E2348/69]
gi|312290807|gb|EFR18684.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 2362-75]
gi|324010082|gb|EGB79301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 57-2]
Length = 356
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 205/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ R+ AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---RINATMTAR--HGALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|315499637|ref|YP_004088440.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Asticcacaulis excentricus CB 48]
gi|315417649|gb|ADU14289.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Asticcacaulis excentricus CB 48]
Length = 348
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 174/359 (48%), Positives = 223/359 (62%), Gaps = 13/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP RIALRPV PR++ARL+ V + D V DLP+ L + D +V
Sbjct: 1 MKVSDFDFDLPEDRIALRPVTPREAARLLRVDGVVR-----EDWRVGDLPSLLKAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ QL G R TL + W + +P + I++GD L F
Sbjct: 56 INNTRVLPTQLKGTRVREGQTV--AFEATLIKSLDGQRWQAFLKPGRRIREGDTLRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V+ K G +L F + E+ + +G +PLPPYI KRP D +D DY
Sbjct: 111 ---DDLSARVLSKDEDGVYVLRFEQAASEVLNGLHRLGGMPLPPYIRSKRPEDEQDKSDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +GSVAAPTAGLHFT LL L G+ VTLHVGAGTF+PVKVEDT DH M
Sbjct: 168 QTVFARDEGSVAAPTAGLHFTPELLQALRDKGVLFEEVTLHVGAGTFLPVKVEDTKDHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A +A +N+ + GGRI+++GTT+LRL+E+A DG I+P+SG T+IFITPG
Sbjct: 228 HAEFGVVSADSAARINAARVAGGRIIAIGTTALRLIESACDADGRIHPFSGDTDIFITPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R+ D+L +NFHLPKSTL MLV AF G E K Y HAI+ YRF+SYGD SLL K
Sbjct: 288 VPVRSADMLWTNFHLPKSTLFMLVCAFAGTEAMKAAYAHAINSGYRFFSYGDASLLTNK 346
>gi|261212160|ref|ZP_05926446.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC341]
gi|260838768|gb|EEX65419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC341]
Length = 352
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 132/363 (36%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLTDGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+V++ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVDNIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESAAQDALKKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY++ VD L++NFHLP+STL+MLVSAF G T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYLLVDCLITNFHLPESTLIMLVSAFAGYGHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|317495474|ref|ZP_07953842.1| tRNA ribosyltransferase-isomerase [Gemella moribillum M424]
gi|316914288|gb|EFV35766.1| tRNA ribosyltransferase-isomerase [Gemella moribillum M424]
Length = 342
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF LP IA P+ RD+++L+ + SD+ + + D +V
Sbjct: 1 MKLEQFDFYLPEELIAQTPLLKRDTSKLLCIDKK---ENNYEHKTFSDIIDYFEAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L N W +P+K IK G ++ F
Sbjct: 58 LNNTRVMPARLYGQK----KDTGAAIEVLLLKNEVDNIWECLVKPAKRIKIGSVVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +EA + G F GI + ++ +GT+PLPPYI + Y
Sbjct: 111 -GDGIMEAICTRVLDDGFRYFEFKYEGI-FQERLDELGTMPLPPYIKERLTD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ + G+ V ++TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYSKEVGSSAAPTAGLHFTNELLDKIKAKGVNVAYLTLHVGLGTFRPVAVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE +D TA+ +N K GRI SVGTT+ R LET A +G I SG+TNIFI P
Sbjct: 225 HSEYYTLDEKTAEIINKTKENNGRIFSVGTTTTRTLETIARDNNGKIVAASGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G++F+ VD L++NFHLPKS+L+MLVSAF E+ +Y+ A+ + YRF+S+GD ++
Sbjct: 285 GFKFKCVDGLITNFHLPKSSLIMLVSAFYEREKILDLYKIAVENKYRFFSFGDAMII 341
>gi|170021223|ref|YP_001726177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ATCC 8739]
gi|189038521|sp|B1J044|QUEA_ECOLC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169756151|gb|ACA78850.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Escherichia coli ATCC 8739]
Length = 356
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 200/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+++ ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLLLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|194365392|ref|YP_002028002.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas maltophilia R551-3]
gi|226713851|sp|B4SSS0|QUEA_STRM5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194348196|gb|ACF51319.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Stenotrophomonas maltophilia R551-3]
Length = 343
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 143/359 (39%), Positives = 201/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+++LP IA P+ R ++RL++V P P +D V DLP+ L D +V
Sbjct: 1 MKKSDFNYNLPAELIAQAPLAERSASRLLLVPP---APDAFTDLQVRDLPSLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G + +
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQVGASKSPKAGSRIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE ++ LE+ + G +PLPPYI R+ +D Y
Sbjct: 113 GEAEVL-------GRDGEFYVLQFHVPESLEQWLLHAGRLPLPPYIQREPGMDD--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+ L G+ VTLHVGAGTF PV+ +D DH+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLAALKDKGVDFGHVTLHVGAGTFQPVRADDLKDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITPG
Sbjct: 224 HREWLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESAMR-DGELLPFAGETQIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YR R+VD +++NFHLP+STLLM++SAF G E + YQHAI+ YRF+SYGD LLF +
Sbjct: 283 YRIRSVDAMVTNFHLPESTLLMMISAFAGKERVFEAYQHAIAQRYRFFSYGDAMLLFPQ 341
>gi|238755132|ref|ZP_04616479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
ruckeri ATCC 29473]
gi|238706692|gb|EEP99062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
ruckeri ATCC 29473]
Length = 356
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L + D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLEAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G +
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGTEMLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ VG IPLPPYI RP + D Y
Sbjct: 113 ES---IRATMLAR--HDTLFELRFDEEQDVFSILNAVGHIPLPPYI--DRPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L + GI++ FVTLHVGAGTF PV+VE ++HIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALRNKGIEMAFVTLHVGAGTFQPVRVESIEEHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A +EDG+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANASEDGVIAPFYGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A+ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVVEKYRFFSYGDAMFISR 345
>gi|251793021|ref|YP_003007747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter aphrophilus NJ8700]
gi|247534414|gb|ACS97660.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter aphrophilus NJ8700]
Length = 363
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 134/365 (36%), Positives = 196/365 (53%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R ++RL+ ++ I +D+ + D +V
Sbjct: 1 MRVADFNFDLPDELIARYPKPERTASRLLQLNGENG---EIFHRTFADVLDLIQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + +S + + + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKTS-----GGKLEVLVERVLSESRFLAHVRSSKAPKAGAELILGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ ++ + + L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGNGVKAIMLGRQDSLFEIEIAEKQTALFDVLQQIGHMPLPPYI--DRPDEEADQER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLEKLKEKGVNFAFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVPQSVCDAILATKQAGKRVIAVGTTSVRSIESAALAAEEKQSAVLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKTFRLVDCLITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|242240323|ref|YP_002988504.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
dadantii Ech703]
gi|242132380|gb|ACS86682.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
dadantii Ech703]
Length = 362
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R + RL+ + ++ + +DL LN D +V
Sbjct: 3 MRVADFSFELPESLIARYPQAQRSACRLLSLEGTTGA---LTHGVFTDLLDTLNPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 60 FNNTRVIPARLFGRKAS-----GGKLEVLVERMLDDKRVLAHVRASKAPKPGMELLLGED 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++++ + + ++ ++ +G +PLPPYI RP +A D Y
Sbjct: 115 ES---VHATMLER--HDALFEIRFDDERDILTILNDIGHMPLPPYI--DRPDEAADRELY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE ++H+M
Sbjct: 168 QTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVQMAFVTLHVGAGTFQPVRVESIEEHVM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+V+VGTTS+R LE+A + G + P+ G T+IFI
Sbjct: 228 HAEYAEVPQEVLDAVLACKARGNRVVAVGTTSVRSLESAAQASPAGQLAPFFGDTSIFIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY +R VD L++NFHLP+STL+MLVSAF G T + Y+ A+ YRF+SYGD +
Sbjct: 288 PGYHYRVVDALVTNFHLPESTLIMLVSAFAGYRHTMEAYRQAVVSEYRFFSYGDAMFITP 347
>gi|325919632|ref|ZP_08181641.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
gardneri ATCC 19865]
gi|325549880|gb|EGD20725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
gardneri ATCC 19865]
Length = 356
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 144/364 (39%), Positives = 204/364 (56%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P+ P + D V DLP L D ++
Sbjct: 1 MKKSDFHYDLPDELIAQAPLAERAASRLLVVPPS---PQALVDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGEREARVQIGASKSPKAGSLIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE+ + G +PLPPYI R+ ++ Y
Sbjct: 113 GQAEVL-------GRDGEFYLLRFDIPTTLEQWLPEAGQLPLPPYIRREPGVED--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL++L G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEALLAQLRERGVEFGHVTLHVGAGTFQPVRVDALDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A DG + P++G T I
Sbjct: 224 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDAAPDGELLPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STLLM+VSAF G E YQHAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGRERIFAAYQHAIAQRYRFFSYGDAML 343
Query: 356 LFQK 359
L+ +
Sbjct: 344 LWGR 347
>gi|332141988|ref|YP_004427726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii str. 'Deep ecotype']
gi|238693253|sp|B4RVF4|QUEA_ALTMD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|327552010|gb|AEA98728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii str. 'Deep ecotype']
Length = 348
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 129/364 (35%), Positives = 194/364 (53%), Gaps = 23/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP + IA P R ++RL+ + + + +D+ F+ D +V
Sbjct: 1 MKLSDFSFVLPENLIAKYPTQQRTASRLLHLDGKNG---KVEHTMFADMLKFVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + S + + R SK K G L
Sbjct: 58 FNNTRVIPARLLGKKE-----TGGQVEVLIERITSDTTALAHVRASKAPKPGTKLILEE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V + ++ + + G +PLPPYI RP + D Y
Sbjct: 112 ------KVNVTVTGRDDALFILQFDHDETVLTLLEAHGHMPLPPYI--DRPDENSDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF ++L+ L G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNEKPGAVAAPTAGLHFDDSILNALKEKGVNLAFVTLHVGAGTFQPVRVDNIQEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFTN 294
H+E + A+ + K+ G R+++VGTTS+R LE+A ++ II P++ T
Sbjct: 224 HAEFAEVPQDVVDAVLNTKANGKRVIAVGTTSVRSLESAAKASAERGDEQIIAPFNEDTE 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG+ F+ VD + +NFHLP+STL+ML+SAF G E YQ AI+ YRF+SYGD
Sbjct: 284 IFIYPGFEFKVVDAMFTNFHLPESTLMMLISAFAGKENVMNAYQEAIAKEYRFFSYGDAM 343
Query: 355 LLFQ 358
+ +
Sbjct: 344 FIER 347
>gi|298244051|ref|ZP_06967858.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Ktedonobacter racemifer DSM 44963]
gi|297557105|gb|EFH90969.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Ktedonobacter racemifer DSM 44963]
Length = 379
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 146/374 (39%), Positives = 219/374 (58%), Gaps = 28/374 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LP IA P+ PRDS+RL+VV ++ D+ +L D ++
Sbjct: 17 LKISDFDYHLPNELIAQTPIEPRDSSRLLVVKRQ---DETLAHQHFRDIEEYLQPGDLLI 73
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP---NSWSVYARPSKVIKKGDILHF 117
N ++VI A+L G R + L S ++W RP + +++G + F
Sbjct: 74 ANQSRVIPARLLGKR----AESGGAVEVLLLAERSDLGQDTWEALVRPGRRLREGARIFF 129
Query: 118 FSQ-DGQSRLEATVIDKWNTGEILLVFSISG------------IELERQISLVGTIPLPP 164
++ + Q+RL ++++ G ++ F + G +++ + I +G +PLPP
Sbjct: 130 GAETEEQARLIGEILERTEAGGRVVRFHVPGRSQERQNDPYALLDVRQVIDEIGKMPLPP 189
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
YI YQT YA+I+GS AAPTAGLHFT LL RL + G++ FVTLHVG
Sbjct: 190 YIHETLDD----PERYQTVYARIRGSAAAPTAGLHFTPQLLERLRARGVRTGFVTLHVGL 245
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTED 283
TF PV+ ED +H MHSE +D TA +N ++RGGR+V+VGTTS+R+LE+ A+ +
Sbjct: 246 DTFRPVESEDVREHKMHSEEIELDETTAALINETRARGGRVVAVGTTSVRVLESVASLHE 305
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G I P+ G T +FITPGYR++AVD L++NFHLP+STLL+LVSAF ++ YQ AI+
Sbjct: 306 GRIVPYKGHTRLFITPGYRYQAVDALITNFHLPRSTLLLLVSAFMTKPLMERAYQEAITE 365
Query: 344 AYRFYSYGDTSLLF 357
YRF+S+GD L+
Sbjct: 366 RYRFFSFGDAMLIL 379
>gi|218549935|ref|YP_002383726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
fergusonii ATCC 35469]
gi|226736741|sp|B7LMI2|QUEA_ESCF3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218357476|emb|CAQ90115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
fergusonii ATCC 35469]
gi|324114624|gb|EGC08592.1| tRNA ribosyltransferase-isomerase [Escherichia fergusonii B253]
Length = 356
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLATKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|325498312|gb|EGC96171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
fergusonii ECD227]
Length = 356
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLATKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|90414611|ref|ZP_01222584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium profundum 3TCK]
gi|90324327|gb|EAS40896.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium profundum 3TCK]
Length = 351
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 198/363 (54%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I D+ D V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQL---TGETGNIQHKGFKDVLELAEPGDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARIFGRKAS-----GGKIEVLVERMLDDKSILAHVRASKSPKPGNELLLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +A +I + + + S + + VG +PLPPYI RP + D Y
Sbjct: 113 D---DYQAEMIAR--HDTLFEIRFNSDKTVLEILEEVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V++ DDH M
Sbjct: 166 QTVYNAKPGAVAAPTAGLHFDDELMAALKAKGVNFAFVTLHVGAGTFQPVRVDNIDDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
HSE + A+N+ K+ GGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HSEYVEVPQDVVDAVNATKANGGRIIAVGTTSVRSLESAAQDAVKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEFQLVDVLVTNFHLPESTLIMLVSAFAGYEHTMNAYLQAVDNQYRFFSYGDSMFI 345
Query: 357 FQK 359
++
Sbjct: 346 TRR 348
>gi|170025482|ref|YP_001721987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis YPIII]
gi|238688412|sp|B1JIF0|QUEA_YERPY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169752016|gb|ACA69534.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Yersinia
pseudotuberculosis YPIII]
Length = 356
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---NIRATMLAR--HDTLFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLATLQEKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|197283988|ref|YP_002149860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis HI4320]
gi|238693147|sp|B4EU12|QUEA_PROMH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194681475|emb|CAR40314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis HI4320]
Length = 357
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P R RL+ + +S + +D+ LN+ D +V
Sbjct: 1 MRVSDFRFDLPESLIAHYPHPQRSGCRLLSLEGKTGN---LSHGVFTDVLDKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARIYGRKAS-----GGKIEVLVERMLDEHRVLAHVRASKSPKEGASLILGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+I + + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---VQATMIAR--HDTLFEIRFDDERDVLTILNSIGHMPLPPYI--DRPDERSDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL L + G+++ FVTLHVGAGTF PV+V++ ++H M
Sbjct: 166 QTVYNERPGAVAAPTAGLHFDEPLLEALRNKGVEMAFVTLHVGAGTFQPVRVDNIEEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKAAKDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD + +
Sbjct: 286 PGYQYQIIDALITNFHLPESTLIMLVSAFAGYKNTMNAYNVAVEQKYRFFSYGDAMFITR 345
>gi|152978729|ref|YP_001344358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus succinogenes 130Z]
gi|150840452|gb|ABR74423.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Actinobacillus succinogenes 130Z]
Length = 380
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 140/366 (38%), Positives = 199/366 (54%), Gaps = 17/366 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R S+RL+ ++ I SD+ +N D +V
Sbjct: 22 MLVSDFHFDLPDELIARYPKPERTSSRLLQLNGENG---EIFHRTFSDVYGLINEGDLLV 78
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ ++ S+ + R SK K G L
Sbjct: 79 FNNTRVIPARMYGRKIS-----GGKVEVLAERILTETSFLAHVRSSKAPKAGAELILGED 133
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ + L S L + +G +PLPPYI RP + D
Sbjct: 134 KLGEGNGVRMKMLGRQGALFELEISEKPTALLDVLQKIGHMPLPPYI--DRPDEEADQER 191
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+V+ +DH
Sbjct: 192 YQTVYNKVPGAVAAPTAGLHFDDELLAKLKAKGVNFAFVTLHVGAGTFQPVRVDKIEDHH 251
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K+ G R+++VGTTS+R LE+A +I P+ T
Sbjct: 252 MHAEYAEVPQEVVNAVLATKAAGKRVIAVGTTSVRSLESAALAAEEKGSSQLIEPFFSDT 311
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + + Y+ A+ + YRF+SYGD
Sbjct: 312 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNIMQAYKSAVENRYRFFSYGDA 371
Query: 354 SLLFQK 359
L +K
Sbjct: 372 MFLTKK 377
>gi|325577691|ref|ZP_08147966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parainfluenzae ATCC 33392]
gi|325160436|gb|EGC72562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parainfluenzae ATCC 33392]
Length = 363
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 137/365 (37%), Positives = 198/365 (54%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ ++ IS +D+ ++ D ++
Sbjct: 1 MRVSDFHFNLPDELIARYPKEDRSSCRLLQLNGENG---EISHRTFTDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERVLSEHHFLAHIRSSKAPKEGTELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ ++ + + + + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGVKAIMVGRQDALFEVELADKSRNVLDVLQEIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DHI
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLQKLHEKGVNFEFVTLHVGAGTFQPVRVENIEDHI 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGII---NPWSGFT 293
MH+E + A+ K G R+++VGTTS+R +ETA E+G P+ T
Sbjct: 231 MHAEYVELSQEVCNAIIETKKAGKRVIAVGTTSVRSVETAALSAEENGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKSFRVVDALITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFITK 355
>gi|328543843|ref|YP_004303952.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Polymorphum gilvum SL003B-26A1]
gi|326413587|gb|ADZ70650.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Polymorphum gilvum SL003B-26A1]
Length = 365
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 192/361 (53%), Positives = 245/361 (67%), Gaps = 7/361 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PRD+ARL+VV P ++D V DL L DA+V
Sbjct: 1 MRVDVFDFDLPPERIALRPARPRDAARLLVVRP--GQSPELADCGVRDLARELEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R I TLH+R + W + RP+K + GD + F +
Sbjct: 59 FNDTRVIPAQLEGTRTRGEAVAG--IGATLHLRAGADRWWAFVRPAKKLAVGDRVRFGGE 116
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV DK ++GE+LL F ++G +L++ I+ VG IPLPPYIA +R D +D
Sbjct: 117 GRACLLGTLDATVADKRDSGEVLLAFDLAGPDLDQAIAAVGHIPLPPYIAARRGEDEQDR 176
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A G+VAAPTAGLHFT L+ L + GI+ + VTLHVGAGTF+PVK EDT D
Sbjct: 177 SDYQTMFADKDGAVAAPTAGLHFTPALIEALDARGIERHTVTLHVGAGTFLPVKAEDTAD 236
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A TA AL +V++RG R+V+VGTTSLR+LE+A + +SG T+IFI
Sbjct: 237 HRMHAEWGKVSAATAAALKAVRARGNRVVAVGTTSLRILESAAQGADGLTAFSGETSIFI 296
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ ++ Y HAI+ YRFYSYGD LLF
Sbjct: 297 TPGYRFRAVDVLMTNFHLPRSTLFMLVSAFSGLQTMRRAYAHAIASGYRFYSYGDACLLF 356
Query: 358 Q 358
Sbjct: 357 P 357
>gi|260771416|ref|ZP_05880341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
furnissii CIP 102972]
gi|260613542|gb|EEX38736.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
furnissii CIP 102972]
Length = 352
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 136/364 (37%), Positives = 202/364 (55%), Gaps = 20/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R ++RL+ + N + D D+ + +D +V
Sbjct: 1 MQVSDFHFELPDELIARYPMAERTASRLLQLDGNTG---ELVDGTFKDVLNCVEPDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHSILAHVRCSKPPKPGTELFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMDARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PV+V++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIKAKGVEFAYVTLHVGAGTFQPVRVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G T Y HA+ YRF+SYGD +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYAHTMAAYDHAVKQQYRFFSYGDAMFI 345
Query: 357 FQKR 360
+KR
Sbjct: 346 -RKR 348
>gi|22124897|ref|NP_668320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis KIM 10]
gi|45440588|ref|NP_992127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Microtus str. 91001]
gi|149364962|ref|ZP_01886997.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CA88-4125]
gi|162419575|ref|YP_001607728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Angola]
gi|165926608|ref|ZP_02222440.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165935850|ref|ZP_02224420.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. IP275]
gi|166010965|ref|ZP_02231863.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166212906|ref|ZP_02238941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167398790|ref|ZP_02304314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167421697|ref|ZP_02313450.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423843|ref|ZP_02315596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|218930222|ref|YP_002348097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CO92]
gi|229838797|ref|ZP_04458956.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229896049|ref|ZP_04511219.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides A]
gi|229899365|ref|ZP_04514508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. India 195]
gi|229901288|ref|ZP_04516410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|294504920|ref|YP_003568982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Z176003]
gi|21263880|sp|Q8ZC32|QUEA_YERPE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713856|sp|A9R352|QUEA_YERPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21957733|gb|AAM84571.1|AE013703_1 probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Yersinia pestis KIM 10]
gi|45435445|gb|AAS61004.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Microtus str. 91001]
gi|115348833|emb|CAL21787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CO92]
gi|149291375|gb|EDM41449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CA88-4125]
gi|162352390|gb|ABX86338.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Angola]
gi|165915995|gb|EDR34602.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. IP275]
gi|165921536|gb|EDR38733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165989965|gb|EDR42266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166205693|gb|EDR50173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960616|gb|EDR56637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167051294|gb|EDR62702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167058013|gb|EDR67759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|229681217|gb|EEO77311.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|229687767|gb|EEO79840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. India 195]
gi|229695163|gb|EEO85210.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229700972|gb|EEO89001.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides A]
gi|262362985|gb|ACY59706.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis D106004]
gi|262366906|gb|ACY63463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis D182038]
gi|294355379|gb|ADE65720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Z176003]
gi|320016379|gb|ADV99950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 356
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 ES---IRATMLAR--HDTLFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|258619938|ref|ZP_05714978.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM573]
gi|258587671|gb|EEW12380.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM573]
Length = 352
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D-----EFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESAAQDALKKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYGHTMAAYEHAVQQQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|167623484|ref|YP_001673778.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
halifaxensis HAW-EB4]
gi|189038879|sp|B0TND3|QUEA_SHEHH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167353506|gb|ABZ76119.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
halifaxensis HAW-EB4]
Length = 345
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 197/360 (54%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVADFSFELPDELIARYPTAERTASRLLSLDGNSG---ELTDLQFTDILEQVNLGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K I+
Sbjct: 58 FNNTRVIPARMFGQKQS-----GGKLEILVERMLDDKRVLAHVRCSKSPKVDSIICLDGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+I + + S + + VG +PLPPYI RP + D Y
Sbjct: 113 Y-------EMIMVARHDALFELELQSDKTILEVLEDVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L+ L G+ FVTLHVGAGTF PV+V++ DH M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLAALKDKGVNTAFVTLHVGAGTFQPVRVDNILDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+RG R+++VGTTS+R LE+A + +SG T+IFI P
Sbjct: 224 HSEWAEVPQNVVDLIAETKTRGNRVIAVGTTSVRSLESAAKASPEQLEAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|170682221|ref|YP_001742540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SMS-3-5]
gi|191166706|ref|ZP_03028533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B7A]
gi|193065228|ref|ZP_03046301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E22]
gi|194428822|ref|ZP_03061357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B171]
gi|218693866|ref|YP_002401533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 55989]
gi|218698690|ref|YP_002406319.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI39]
gi|218703687|ref|YP_002411206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UMN026]
gi|260842603|ref|YP_003220381.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O103:H2 str. 12009]
gi|293403524|ref|ZP_06647615.1| queA [Escherichia coli FVEC1412]
gi|293408551|ref|ZP_06652390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B354]
gi|298379136|ref|ZP_06989017.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli FVEC1302]
gi|300818272|ref|ZP_07098483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 107-1]
gi|300900471|ref|ZP_07118638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 198-1]
gi|300903331|ref|ZP_07121259.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 84-1]
gi|300936392|ref|ZP_07151320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 21-1]
gi|301025430|ref|ZP_07188981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 69-1]
gi|301301552|ref|ZP_07207687.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 124-1]
gi|309794871|ref|ZP_07689292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 145-7]
gi|331651338|ref|ZP_08352363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M718]
gi|331661780|ref|ZP_08362703.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA143]
gi|331671953|ref|ZP_08372749.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA280]
gi|226736737|sp|B7NJ97|QUEA_ECO7I RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736739|sp|B7N8V7|QUEA_ECOLU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736740|sp|B1LJF3|QUEA_ECOSM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764276|sp|B7L638|QUEA_ECO55 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|170519939|gb|ACB18117.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SMS-3-5]
gi|190903217|gb|EDV62939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B7A]
gi|192927202|gb|EDV81823.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E22]
gi|194413125|gb|EDX29412.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B171]
gi|218350598|emb|CAU96288.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 55989]
gi|218368676|emb|CAR16416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI39]
gi|218430784|emb|CAR11658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UMN026]
gi|257757750|dbj|BAI29247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O103:H2 str. 12009]
gi|284920212|emb|CBG33271.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 042]
gi|291429377|gb|EFF02397.1| queA [Escherichia coli FVEC1412]
gi|291471729|gb|EFF14212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B354]
gi|298280249|gb|EFI21753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli FVEC1302]
gi|300355952|gb|EFJ71822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 198-1]
gi|300396032|gb|EFJ79570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 69-1]
gi|300404626|gb|EFJ88164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 84-1]
gi|300458498|gb|EFK21991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 21-1]
gi|300529163|gb|EFK50225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 107-1]
gi|300843049|gb|EFK70809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 124-1]
gi|308121524|gb|EFO58786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 145-7]
gi|315256229|gb|EFU36197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 85-1]
gi|320201646|gb|EFW76222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli EC4100B]
gi|323160488|gb|EFZ46436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E128010]
gi|323965357|gb|EGB60815.1| tRNA ribosyltransferase-isomerase [Escherichia coli M863]
gi|327254723|gb|EGE66339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli STEC_7v]
gi|331051079|gb|EGI23131.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M718]
gi|331060202|gb|EGI32166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA143]
gi|331070942|gb|EGI42301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA280]
Length = 356
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|15800132|ref|NP_286144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 EDL933]
gi|15829710|ref|NP_308483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. Sakai]
gi|16128390|ref|NP_414939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. MG1655]
gi|24111783|ref|NP_706293.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2a str. 301]
gi|30061900|ref|NP_836071.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2a str. 2457T]
gi|74310974|ref|YP_309393.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sonnei Ss046]
gi|82775690|ref|YP_402037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae Sd197]
gi|89107275|ref|AP_001055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. W3110]
gi|110804427|ref|YP_687947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 5 str. 8401]
gi|157154716|ref|YP_001461586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E24377A]
gi|157159925|ref|YP_001457243.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli HS]
gi|168749861|ref|ZP_02774883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4113]
gi|168756941|ref|ZP_02781948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4401]
gi|168761605|ref|ZP_02786612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4501]
gi|168768350|ref|ZP_02793357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4486]
gi|168776295|ref|ZP_02801302.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4196]
gi|168783265|ref|ZP_02808272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4076]
gi|168786246|ref|ZP_02811253.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC869]
gi|168800282|ref|ZP_02825289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC508]
gi|170079991|ref|YP_001729311.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. DH10B]
gi|170767690|ref|ZP_02902143.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
albertii TW07627]
gi|188494964|ref|ZP_03002234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 53638]
gi|194438913|ref|ZP_03070998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 101-1]
gi|195938532|ref|ZP_03083914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4024]
gi|208808051|ref|ZP_03250388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4206]
gi|208815990|ref|ZP_03257169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4045]
gi|208823080|ref|ZP_03263398.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4042]
gi|209400296|ref|YP_002269047.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4115]
gi|209917617|ref|YP_002291701.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SE11]
gi|217324431|ref|ZP_03440515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14588]
gi|238899693|ref|YP_002925489.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BW2952]
gi|253774610|ref|YP_003037441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254160471|ref|YP_003043579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B str. REL606]
gi|254791586|ref|YP_003076423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14359]
gi|256020372|ref|ZP_05434237.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sp. D9]
gi|256023978|ref|ZP_05437843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
sp. 4_1_40B]
gi|260853625|ref|YP_003227516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O26:H11 str. 11368]
gi|261223882|ref|ZP_05938163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. FRIK2000]
gi|261256404|ref|ZP_05948937.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. FRIK966]
gi|291281309|ref|YP_003498127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. CB9615]
gi|293413659|ref|ZP_06656308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B185]
gi|300820357|ref|ZP_07100509.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 119-7]
gi|300918216|ref|ZP_07134822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 115-1]
gi|300924124|ref|ZP_07140116.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 182-1]
gi|300930301|ref|ZP_07145714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 187-1]
gi|300947945|ref|ZP_07162092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 116-1]
gi|300957968|ref|ZP_07170134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 175-1]
gi|301330735|ref|ZP_07223337.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 78-1]
gi|301647325|ref|ZP_07247138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 146-1]
gi|307137047|ref|ZP_07496403.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H736]
gi|307312220|ref|ZP_07591856.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli W]
gi|309786992|ref|ZP_07681604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1617]
gi|312970499|ref|ZP_07784680.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1827-70]
gi|331640921|ref|ZP_08342056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H736]
gi|331666754|ref|ZP_08367628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA271]
gi|331676072|ref|ZP_08376784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H591]
gi|67471968|sp|P0A7F9|QUEA_ECOLI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|67471969|sp|P0A7G0|QUEA_ECO57 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|67471970|sp|P0A7G1|QUEA_SHIFL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207403|sp|Q32JF9|QUEA_SHIDS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207404|sp|Q3Z504|QUEA_SHISS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123048415|sp|Q0T7I4|QUEA_SHIF8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167016404|sp|A7ZIF7|QUEA_ECO24 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167016405|sp|A7ZX56|QUEA_ECOHS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713837|sp|B5Z2W1|QUEA_ECO5E RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713838|sp|B6HZK5|QUEA_ECOSE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|229598026|sp|B1XEZ3|QUEA_ECODH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|259551445|sp|C4ZTG2|QUEA_ECOBW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|12513255|gb|AAG54752.1|AE005220_1 synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Escherichia coli O157:H7
str. EDL933]
gi|147485|gb|AAA16114.1| queuosine biosynthesis [Escherichia coli]
gi|1773089|gb|AAB40161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli]
gi|1786606|gb|AAC73508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. MG1655]
gi|13359913|dbj|BAB33879.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli O157:H7 str. Sakai]
gi|24050570|gb|AAN42000.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella flexneri 2a str. 301]
gi|30040144|gb|AAP15877.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella flexneri 2a str. 2457T]
gi|73854451|gb|AAZ87158.1| synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Shigella sonnei Ss046]
gi|81239838|gb|ABB60548.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella dysenteriae Sd197]
gi|85674545|dbj|BAE76185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K12 substr. W3110]
gi|110613975|gb|ABF02642.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella flexneri 5 str. 8401]
gi|157065605|gb|ABV04860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli HS]
gi|157076746|gb|ABV16454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E24377A]
gi|169887826|gb|ACB01533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. DH10B]
gi|170123178|gb|EDS92109.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
albertii TW07627]
gi|187768305|gb|EDU32149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4196]
gi|188015855|gb|EDU53977.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4113]
gi|188490163|gb|EDU65266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 53638]
gi|188999361|gb|EDU68347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4076]
gi|189355981|gb|EDU74400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4401]
gi|189362534|gb|EDU80953.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4486]
gi|189368104|gb|EDU86520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4501]
gi|189373513|gb|EDU91929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC869]
gi|189377399|gb|EDU95815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC508]
gi|194422207|gb|EDX38209.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 101-1]
gi|208727852|gb|EDZ77453.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4206]
gi|208732638|gb|EDZ81326.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4045]
gi|208737273|gb|EDZ84957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4042]
gi|209161696|gb|ACI39129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4115]
gi|209744174|gb|ACI70394.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744176|gb|ACI70395.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744178|gb|ACI70396.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744180|gb|ACI70397.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744182|gb|ACI70398.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209910876|dbj|BAG75950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SE11]
gi|217320652|gb|EEC29076.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14588]
gi|238863509|gb|ACR65507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BW2952]
gi|242376183|emb|CAQ30874.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BL21(DE3)]
gi|253325654|gb|ACT30256.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972372|gb|ACT38043.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B str. REL606]
gi|253976582|gb|ACT42252.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BL21(DE3)]
gi|254590986|gb|ACT70347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14359]
gi|257752274|dbj|BAI23776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O26:H11 str. 11368]
gi|260450408|gb|ACX40830.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli DH1]
gi|281599737|gb|ADA72721.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2002017]
gi|290761182|gb|ADD55143.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. CB9615]
gi|291433717|gb|EFF06690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B185]
gi|300315342|gb|EFJ65126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 175-1]
gi|300414601|gb|EFJ97911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 115-1]
gi|300419577|gb|EFK02888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 182-1]
gi|300452497|gb|EFK16117.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 116-1]
gi|300461873|gb|EFK25366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 187-1]
gi|300527142|gb|EFK48211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 119-7]
gi|300843396|gb|EFK71156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 78-1]
gi|301074521|gb|EFK89327.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 146-1]
gi|306907722|gb|EFN38224.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli W]
gi|308924570|gb|EFP70065.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1617]
gi|309700667|emb|CBI99963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ETEC H10407]
gi|310337148|gb|EFQ02286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1827-70]
gi|313646978|gb|EFS11435.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2a str. 2457T]
gi|315059682|gb|ADT74009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli W]
gi|315135087|dbj|BAJ42246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli DH1]
gi|315616655|gb|EFU97272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 3431]
gi|320192818|gb|EFW67458.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC1212]
gi|320638394|gb|EFX08108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. G5101]
gi|320643774|gb|EFX12897.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H- str. 493-89]
gi|320649125|gb|EFX17703.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H- str. H 2687]
gi|320656018|gb|EFX23934.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320661168|gb|EFX28599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. USDA 5905]
gi|320665144|gb|EFX32237.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. LSU-61]
gi|323152127|gb|EFZ38420.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli EPECa14]
gi|323164196|gb|EFZ50003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sonnei 53G]
gi|323170486|gb|EFZ56136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli LT-68]
gi|323184769|gb|EFZ70140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1357]
gi|323379752|gb|ADX52020.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli KO11]
gi|323938590|gb|EGB34839.1| tRNA ribosyltransferase-isomerase [Escherichia coli E1520]
gi|323943211|gb|EGB39367.1| tRNA ribosyltransferase-isomerase [Escherichia coli E482]
gi|323945306|gb|EGB41362.1| tRNA ribosyltransferase-isomerase [Escherichia coli H120]
gi|323963391|gb|EGB58953.1| tRNA ribosyltransferase-isomerase [Escherichia coli H489]
gi|323972255|gb|EGB67465.1| tRNA ribosyltransferase-isomerase [Escherichia coli TA007]
gi|323976114|gb|EGB71207.1| tRNA ribosyltransferase-isomerase [Escherichia coli TW10509]
gi|324116889|gb|EGC10802.1| tRNA ribosyltransferase-isomerase [Escherichia coli E1167]
gi|326341165|gb|EGD64957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. 1044]
gi|331037719|gb|EGI09939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H736]
gi|331065978|gb|EGI37862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA271]
gi|331076130|gb|EGI47412.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H591]
gi|332103903|gb|EGJ07249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sp. D9]
Length = 356
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|260866563|ref|YP_003232965.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O111:H- str. 11128]
gi|257762919|dbj|BAI34414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O111:H- str. 11128]
gi|323178332|gb|EFZ63910.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1180]
Length = 356
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI+
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHII 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|108808678|ref|YP_652594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Antiqua]
gi|108811060|ref|YP_646827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|145600086|ref|YP_001164162.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides F]
gi|270489477|ref|ZP_06206551.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis KIM D27]
gi|108774708|gb|ABG17227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|108780591|gb|ABG14649.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Antiqua]
gi|145211782|gb|ABP41189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides F]
gi|270337981|gb|EFA48758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis KIM D27]
Length = 361
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 6 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 63 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 118 ES---IRATMLAR--HDTLFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 171 QTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T IFI
Sbjct: 231 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDTRIFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 291 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 350
>gi|289626174|ref|ZP_06459128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|289649081|ref|ZP_06480424.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aesculi str. 2250]
gi|298486003|ref|ZP_07004077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298159480|gb|EFI00527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|330869599|gb|EGH04308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330950810|gb|EGH51070.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae Cit 7]
Length = 354
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|294788018|ref|ZP_06753262.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Simonsiella
muelleri ATCC 29453]
gi|294484311|gb|EFG31994.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Simonsiella
muelleri ATCC 29453]
Length = 340
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 150/359 (41%), Positives = 209/359 (58%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P R S+RL+V PN I D SDL ++ + D ++
Sbjct: 1 MHLSEFDFELPEQLIAQNPPTVRGSSRLLVALPN----QPIEDKKFSDLINYIEAGDVLI 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKAS-----GGKIEALIERVLDEHTALAHIRSSKSPKTGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ AT++++ GE+ + + + + G +PLPPYI R D Y
Sbjct: 109 --DGEIHATMLER--VGELFKIHFSGSLNVYELLEQHGVLPLPPYIERAAGADDD--DRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT +L L G++ VTLHVGAGTF PV+V++ +H M
Sbjct: 163 QTVYAKHQGAVAAPTAGLHFTDEILGSLKDKGVEFAEVTLHVGAGTFQPVRVDNIAEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T + + ++RG +I SVGTTSLR +E+A G + SG T+IFITP
Sbjct: 223 HSEWFQIPDATVSTIQAAQARGNKIWSVGTTSLRAIESAARS-GSLKAGSGDTDIFITPR 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ F+ +D L++NFHLPKSTLLMLVSAF G + +++YQHAI YRF+SYGD +L ++
Sbjct: 282 FEFQIIDRLITNFHLPKSTLLMLVSAFSGSLKIREIYQHAIEQEYRFFSYGDAMILGRE 340
>gi|117622666|ref|YP_851579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli APEC O1]
gi|166216720|sp|A1A875|QUEA_ECOK1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115511790|gb|ABI99864.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Escherichia coli APEC O1]
gi|323952983|gb|EGB48851.1| tRNA ribosyltransferase-isomerase [Escherichia coli H252]
Length = 356
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 200/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDEKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G IPLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRSVLDILNSIGHIPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + +A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVEAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|325915107|ref|ZP_08177433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
vesicatoria ATCC 35937]
gi|325538629|gb|EGD10299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
vesicatoria ATCC 35937]
Length = 356
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 145/364 (39%), Positives = 206/364 (56%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP IA P+ R ++RL+VV P P SD V DLP L D ++
Sbjct: 1 MKKSDFNYALPEELIAQAPLAERAASRLLVVSP---APAAFSDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGEREARVQIGASKSPKAGSLIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ + LE+ + G +PLPPYI R+ ++ Y
Sbjct: 113 GQAEVL-------GRDGEFYLLRFEIPLPLEQWLPEAGRLPLPPYIRREPGLED--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +LL+RL GI+ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEDLLARLRERGIEFGHVTLHVGAGTFQPVRVDALDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTEAAPEGELLPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STLLM+VSAF G E + YQHAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGRERIFEAYQHAIAQRYRFFSYGDAML 343
Query: 356 LFQK 359
L+ +
Sbjct: 344 LWGR 347
>gi|256420574|ref|YP_003121227.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Chitinophaga pinensis DSM 2588]
gi|256035482|gb|ACU59026.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Chitinophaga pinensis DSM 2588]
Length = 349
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 134/361 (37%), Positives = 195/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP + IA P RD ARLMVV+ I + D+ + N D +V
Sbjct: 1 MKLSQFRFDLPLNLIAQHPSKTRDEARLMVVNRATG---KIEHKVFRDIINYFNDKDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L ++ W V P++ I+ G+ L+F
Sbjct: 58 VNNTKVFPARLYGRK----EKTGAKIEVFLLRELNKQNRLWDVIVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + + F G + ++ + +G PLP YI R + D
Sbjct: 114 DDES---LVAEVIDNTTSRGRTIRFLFEGDDNEFKQVLDTLGETPLPKYIK--RKPEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ L+ RL G+K VTLH G GTF P++VED
Sbjct: 169 KERYQTVYAKHEGAVAAPTAGLHFSRELIKRLEIKGVKFAEVTLHTGLGTFRPIEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M +E ID + +N K ++ ++GTT++R +E++ T ++ G+TN F
Sbjct: 229 KHKMDAEYFNIDEYAVKVVNKAKEENRKVCAIGTTTVRAVESSVTAQNLLKAAEGWTNTF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + L++NFHLPK++LL++V AF G + + YQ AI YRF+SYGD L+
Sbjct: 289 IHPPYDFAIPNALVTNFHLPKTSLLIMVCAFAGYDLVMEAYQQAIKEKYRFFSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|91209473|ref|YP_539459.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UTI89]
gi|218557314|ref|YP_002390227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli S88]
gi|237707601|ref|ZP_04538082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
sp. 3_2_53FAA]
gi|122424776|sp|Q1RFD6|QUEA_ECOUT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736736|sp|B7MD63|QUEA_ECO45 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91071047|gb|ABE05928.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Escherichia coli UTI89]
gi|218364083|emb|CAR01748.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli S88]
gi|226898811|gb|EEH85070.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
sp. 3_2_53FAA]
gi|307628126|gb|ADN72430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UM146]
gi|315289880|gb|EFU49270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 110-3]
gi|323958598|gb|EGB54301.1| tRNA ribosyltransferase-isomerase [Escherichia coli H263]
Length = 356
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDEKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G IPLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRSVLDILNSIGHIPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|84684975|ref|ZP_01012875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Maritimibacter alkaliphilus HTCC2654]
gi|84667310|gb|EAQ13780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2654]
Length = 355
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 163/358 (45%), Positives = 224/358 (62%), Gaps = 14/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++DFDLP IA RP PR SARL+V I+D +V+DL +L D +V
Sbjct: 9 RLSDYDFDLPEDLIATRPARPRSSARLLVAER-----ARITDGVVTDLVDWLRPGDRLVL 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R + I TL P +WS +P + +K G+ + F +
Sbjct: 64 NDTRVIPARLEGTRTRGEA--QARIEVTLLAPDAQPGAWSALVKPLRKVKDGETIDFAAG 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV+ + + G+ +L F+++G + ++ G +PLPPYI KR DA+D DY
Sbjct: 122 -----LSATVLSR-SEGQAVLTFNLTGAAFDAALAEAGRMPLPPYIEAKRRADAQDREDY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL+ L + G+ VTLHVGAGTF+PVKV+D DH M
Sbjct: 176 QTVWARQTGAVAAPTASLHFDDALLAALDARGVARTHVTLHVGAGTFLPVKVDDVSDHKM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A +N+ ++ GGRI+ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 236 HAEWGEVTEAAAAEINATRAAGGRIIPVGTTALRLIESAAAAPGRIEPWRGPTDIFIRPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ D LM+NFHLPKSTL+MLVSA G+E +++Y HAI + YRF+SYGD SLL
Sbjct: 296 YAFKITDGLMTNFHLPKSTLMMLVSALMGMERMREVYAHAIENRYRFFSYGDASLLLP 353
>gi|296101526|ref|YP_003611672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295055985|gb|ADF60723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 356
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVADFSFELPETLIAHYPMPERSSCRLLSLDGPTG---ELTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+ + + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IKATMTAR--HDALFEVEFNDERTVLDILNAIGHMPLPPYIE--RPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGSRVVAVGTTSVRSLESAAQAAQKDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMAAYKSAVEQKYRFFSYGDAMFIT 344
>gi|304388396|ref|ZP_07370505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis ATCC 13091]
gi|304337608|gb|EFM03768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis ATCC 13091]
gi|319409824|emb|CBY90132.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein QueA) [Neisseria meningitidis WUE
2594]
Length = 356
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+ L+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSHLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYIE--RAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 293 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGR 350
>gi|293390413|ref|ZP_06634747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|290950947|gb|EFE01066.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 363
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 194/363 (53%), Gaps = 17/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I +D+ +N D ++
Sbjct: 1 MRVADFYFDLPDELIARYPKTERTASRLLQLDGENG---EIFHRTFADVLELINPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKSS-----GGKIEVLVERVLSESRFLAHVRASKAPKEGTELILGED 112
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ G + + + L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGHGVNAVMVGRQGSLFEIEITEKQTALFDVLQKIGHMPLPPYI--DRPDEEADQER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLAKLNAKGVNFAFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN------PWSGFT 293
MH+E + A+ + + G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVPQEVCDAILATQKAGKRVIAVGTTSVRSIESAALAAEQKKSAVLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKSFRVVDCLITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLL 356
+
Sbjct: 351 MFI 353
>gi|218288861|ref|ZP_03493112.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicyclobacillus acidocaldarius LAA1]
gi|218240950|gb|EED08127.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicyclobacillus acidocaldarius LAA1]
Length = 355
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 210/361 (58%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FD++LP IA +P+ RD +RL+ V+ + +++ LNS D +V
Sbjct: 1 MRVEDFDYELPEHLIAQQPLPERDQSRLL---VVDPVDRVVRHRIFAEIVEELNSGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
N+++V+ A+L+ V+ + L V PN+W ARP+K ++ G L
Sbjct: 58 MNDSRVLPARLHAVKP----DTGGHVELLLVRPVDDQPNTWQCLARPAKRLRVGHRLVVG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
DG R+E V+ + + G L+ F + + +G +PLPPYI K
Sbjct: 114 EGDG--RVEIEVVGEEDEGIRLVRFH-TNESVIDVAHRLGEMPLPPYIHEKLEDQ----E 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GSVAAPTAGLHFT LL +L G+++ VTLHVG GTF PV+VE+ ++H
Sbjct: 167 RYQTVYAKRVGSVAAPTAGLHFTERLLQKLRDKGVQLCHVTLHVGIGTFRPVQVENVEEH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + TA+ +N KS G +++VGTT+LR LE A + G++ G T+IFI
Sbjct: 227 RMHSEWYEVSPATAEIVNRAKSEGRPVIAVGTTALRTLEAA-GQSGMLEAKQGETDIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F +D L++NFHLPKSTL MLV A G + K +Y+ A+ +YRF+S+GD + +
Sbjct: 286 PGFKFHIMDGLITNFHLPKSTLFMLVCAIMGTDYAKAVYREAVERSYRFFSFGDAMFIKR 345
Query: 359 K 359
+
Sbjct: 346 R 346
>gi|123443376|ref|YP_001007350.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|166218757|sp|A1JNT4|QUEA_YERE8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|122090337|emb|CAL13204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 362
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGA---LTHGIFTDLLDKLVPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ + VG +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMLAR--HDTLFELRFDDERDVFTILDAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSQRLGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A +++G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKSSDNGLIAPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|110640666|ref|YP_668394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 536]
gi|191173478|ref|ZP_03035005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli F11]
gi|300997408|ref|ZP_07181748.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 200-1]
gi|306813129|ref|ZP_07447322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli NC101]
gi|331645578|ref|ZP_08346682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M605]
gi|123344315|sp|Q0TKN6|QUEA_ECOL5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110342258|gb|ABG68495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 536]
gi|190906187|gb|EDV65799.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli F11]
gi|281177575|dbj|BAI53905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SE15]
gi|300304227|gb|EFJ58747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 200-1]
gi|305853892|gb|EFM54331.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli NC101]
gi|315299571|gb|EFU58819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 16-3]
gi|320197159|gb|EFW71776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli WV_060327]
gi|323191323|gb|EFZ76586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli RN587/1]
gi|324010665|gb|EGB79884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 60-1]
gi|330910199|gb|EGH38709.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli AA86]
gi|331045740|gb|EGI17866.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M605]
Length = 356
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|310829217|ref|YP_003961574.1| hypothetical protein ELI_3655 [Eubacterium limosum KIST612]
gi|308740951|gb|ADO38611.1| hypothetical protein ELI_3655 [Eubacterium limosum KIST612]
Length = 344
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 198/356 (55%), Gaps = 18/356 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
K+F +DLP IA P RD++RLMV++ I D D+ +LN +D +V N
Sbjct: 6 TKDFYYDLPEELIAQTPEKKRDASRLMVLNRMEGS---IQDRYFHDIIDYLNEDDLLVMN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKV+ A++ G + ++ L R+ +W +P K G L F
Sbjct: 63 NTKVLPARIFGKK----EETGGKVELLLLKRLDDKTWETMVKPGKKAMPGTRLVFGD--- 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L+ + DK +G ++ F GI E I +GT+PLPPYI YQT
Sbjct: 116 --KLKGEIKDKIESGLRIIEFEYDGI-FEEIIGELGTMPLPPYIHEVLEDQD----RYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT LL L GI+ VTLHVG GTF PVK ++ DH MH
Sbjct: 169 VYAKYTGSAAAPTAGLHFTEELLDALRRKGIRTAEVTLHVGIGTFRPVKCDNILDHHMHE 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + T + + + +GGR+++VGTTS+R LE+A G + G T+IFI PGY
Sbjct: 229 ETYQVPKETEKLIEETRKKGGRVIAVGTTSVRTLESAAARFGGKVQACEGSTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ +D L++NFHLP+STLLMLVS+F E K YQHAI YRF+S+GD ++
Sbjct: 289 KWQVIDALITNFHLPESTLLMLVSSFYNREAVLKAYQHAIDARYRFFSFGDAMFIY 344
>gi|218552968|ref|YP_002385881.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI1]
gi|226736738|sp|B7M3P4|QUEA_ECO8A RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218359736|emb|CAQ97277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI1]
Length = 356
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVGFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|238577798|gb|ACR46709.1| QueA [Pseudomonas syringae pv. tabaci]
gi|330984993|gb|EGH83096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331009165|gb|EGH89221.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 354
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|56551748|ref|YP_162587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ZM4]
gi|81598273|sp|Q5NP84|QUEA_ZYMMO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56543322|gb|AAV89476.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ZM4]
Length = 342
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 178/359 (49%), Positives = 230/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQEMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEGKK------NQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDFGQD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 110 -----VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIESAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|120434719|ref|YP_860406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gramella
forsetii KT0803]
gi|117576869|emb|CAL65338.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gramella
forsetii KT0803]
Length = 351
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 199/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD A+LMV++ I DL + D +V
Sbjct: 3 MKLSNFNFELPQELLAEYPSENRDEAKLMVLNRKEQT---IEHKKFKDLIDYFEPEDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++P + W V P++ I+ G+ L+F
Sbjct: 60 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNPETKLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + ++ +G PLP YI R ++ D
Sbjct: 116 EDES---LVAEVIDNTTSRGRTLRFLYDGSYSDFRIKLKELGQTPLPKYIK--RDVEPSD 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF PV+VED
Sbjct: 171 EDRYQTIYAKNEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHVGLGTFSPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI + +N+ K+ R+ +VGTT +R+LE+A + D +N + G+TN F
Sbjct: 231 KHKMDSEEAFITKDATEVINNAKTEKRRVCAVGTTVMRVLESAVSSDQTLNEFGGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + KK Y+ A+ YRFY+YGD L+
Sbjct: 291 IFPPYDFNIANCMITNFHTPKSTLLMMVSAFAGHDFMKKAYEEAVKEKYRFYTYGDAMLI 350
Query: 357 F 357
Sbjct: 351 I 351
>gi|325677716|ref|ZP_08157368.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcus albus 8]
gi|324110684|gb|EGC04848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcus albus 8]
Length = 355
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 131/359 (36%), Positives = 188/359 (52%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PR+++R++ + + +L L D +V
Sbjct: 7 MKKSDFYYDLPQELIAQTPIEPRNASRMLCLDRYTG---EVGHDHFYNLCDHLRKGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G I L + W + RP K + G F
Sbjct: 64 LNDSRVLPARIYGE----TEDTHSFIEFLLVEQRGNLEWEILCRPGKKARVGRRFVF--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L A + + G + F L + +G +PLPPYI K
Sbjct: 117 -GGGLLRAEITEVLEDGNRIARFECDDSTNLFAALDEIGQMPLPPYITEKLKD----KER 171
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+ GS AAPTAGLHFT L+ + ++G+ + +VTLHVG GTF PVK + DH
Sbjct: 172 YQTVYSNEIGSSAAPTAGLHFTKEQLADIEAMGVNIAYVTLHVGLGTFRPVKEDRVLDHK 231
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + A TA+ +N KS GGR+++VGTTS R LE+ G I P GFT IFI P
Sbjct: 232 MHREHYELPARTAELINKTKSEGGRVIAVGTTSCRTLESVAALYGDIRPCDGFTEIFIYP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G+ F+ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+S+GD+ +
Sbjct: 292 GFEFKVLDGLITNFHLPESTLIMLVSAFAGYDNTMNAYKIAVEEKYRFFSFGDSMFIAP 350
>gi|331681798|ref|ZP_08382431.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H299]
gi|331081000|gb|EGI52165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H299]
Length = 356
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKSAVEEKYRFFSYGDAMFIT 344
>gi|253990965|ref|YP_003042321.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253782415|emb|CAQ85579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photorhabdus asymbiotica]
Length = 355
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 207/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ + ++ + +D+ LN+ D +V
Sbjct: 1 MRVSDFTFELPDEMIARYPQPQRSSCRLLSLDGATGA---LTHGVFTDVLNKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K+G L
Sbjct: 58 FNNTRVIPARIFGRKV-----TGGKLEVLVERILDDKRVLAHVRASKAPKEGTELLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + ++ + VG +PLPPYI RP + D Y
Sbjct: 113 ES---IKATMLAR--HDTLFEIRFDDERDVLSILDDVGHMPLPPYI--DRPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSERPGAVAAPTAGLHFDEPLLNALREKGVEMVFVTLHVGAGTFQPVRVETIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG ++V+VGTTS+R LE+A +DG+I P+ T IFI
Sbjct: 226 HSEYAEVPQNVVDAVLACKARGNKVVAVGTTSVRSLESAAAACKDGLIAPFFDDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ ++ VD L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD + +
Sbjct: 286 PGFEYQIVDALITNFHLPESTLIMLVSAFAGYKNTMNAYKEAVAEKYRFFSYGDAMFIHR 345
>gi|240949619|ref|ZP_04753954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor NM305]
gi|240295877|gb|EER46553.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor NM305]
Length = 363
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 200/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP + IA P+ R ++RL+ ++ +D +DL L+ D +V
Sbjct: 1 MLVSDFHFDLPDNLIARYPMPDRSASRLLYLNGETG---EFADQHFTDLLEHLHEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L F
Sbjct: 58 FNNTRVIPARLYGRKIS-----GGKVEALIERVLDEHRCLAHVRASKAPKEGTQLIFGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ + + L F L + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGLVATMAARHDTLFELHFESQN-NLFDLLQSAGHMPLPPYI--DRPDEDADQER 169
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF + +L +L G+ FVTLHVGAGTF PV+VE+ DH
Sbjct: 170 YQTVYSKVLGAVAAPTAGLHFDNTMLEKLKEKGVNTAFVTLHVGAGTFQPVRVENILDHK 229
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNI 295
MH+E + + K++G R+++VGTTS+R +E+A D +I P+ T+I
Sbjct: 230 MHAEYAEVSQDVVDKILETKAKGKRVIAVGTTSVRSIESAAQAVKNSDTLIEPFFSDTSI 289
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG F+ VD L++NFHLP+STL+MLVSAF G + T YQHA+ YRF+SYGD
Sbjct: 290 FIYPGKTFKVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQHAVESQYRFFSYGDAMF 349
Query: 356 L 356
+
Sbjct: 350 I 350
>gi|302185766|ref|ZP_07262439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae 642]
Length = 354
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G++AAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGALAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|209695860|ref|YP_002263790.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aliivibrio
salmonicida LFI1238]
gi|226713833|sp|B6EK66|QUEA_ALISL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|208009813|emb|CAQ80120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aliivibrio
salmonicida LFI1238]
Length = 350
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ ++ N + D +D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLHLNGNSG---ELHDGQFTDVLDLVQHGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ GV+ ++ + + +S + R SK K G+ L
Sbjct: 58 FNNTRVIPARMFGVKAS-----GGKLEVLVERVLDDHSVLAHVRCSKSPKPGNQLWLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + + S ++ + +G +PLPPYI RP + D Y
Sbjct: 113 Q---EYEAEMVAR--HDTLFEIRFTSEKKVLDILDEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +++L ++ + G++ +VTLHVGAGTF PV+V++ DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDTDILEKMKAKGVEFAYVTLHVGAGTFQPVRVDNILDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN----PWSGFTNIF 296
HSE + A+ + K+RGGR++SVGTTS+R LE+A P+ T IF
Sbjct: 226 HSEYAEVSQEVVDAIKATKARGGRVISVGTTSVRSLESAAQHALKQGTELAPFFDDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD L++NFHLP+STL+MLVSAF G + T K Y A++H YRF+SYGD +
Sbjct: 286 IYPGYEFQVVDALVTNFHLPESTLIMLVSAFAGYDNTMKAYDQAVNHQYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TKK 348
>gi|71908890|ref|YP_286477.1| queuosine biosynthesis protein [Dechloromonas aromatica RCB]
gi|91207420|sp|Q47AX4|QUEA_DECAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71848511|gb|AAZ48007.1| Queuosine biosynthesis protein [Dechloromonas aromatica RCB]
Length = 352
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 143/357 (40%), Positives = 194/357 (54%), Gaps = 18/357 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V +FDF LPP IA P R +RL+ V C + D +DLP L + D +VFN
Sbjct: 5 VDDFDFPLPPELIAQHPAAERRGSRLLHV-----CGEQLVDRRFADLPTLLKAGDLLVFN 59
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+ G + ++ L V R SK K G +
Sbjct: 60 DTRVIKARFFGQKD-----TGGQVEIMLERIVDATHAICQVRASKAPKAGSTMRLAD--- 111
Query: 123 QSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ + ++ + G +PLPPYI + D YQ
Sbjct: 112 --AFTVKMTGRAGADGDFFALELAEPGDFWELSERYGKLPLPPYIEHP--AEGTDETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHF ++L+ L + GI F+TLHVGAGT+ P++VE DH MH
Sbjct: 168 TVYAREPGAVAAPTAGLHFDEDMLATLQAQGINTAFLTLHVGAGTYRPMRVEKIADHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE I TA A+ + ++ GG++++VGTTSLR LE+A EDG + T+IFITPGY
Sbjct: 228 SERFEIPPATADAITTTRAAGGQVIAVGTTSLRALESAGNEDGTVQVGGAETSIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RF+ VD L++NFHLPKSTLLMLVSAF G + + Y HA++ YRF+SYGD LL +
Sbjct: 288 RFQVVDRLITNFHLPKSTLLMLVSAFAGYDHIRAAYAHAVAERYRFFSYGDAMLLER 344
>gi|119505230|ref|ZP_01627305.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2080]
gi|119458921|gb|EAW40021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2080]
Length = 358
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 200/360 (55%), Gaps = 12/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F +DLP IA P+ R +RL+V+ + + S L L ND +V
Sbjct: 1 MRRQDFYYDLPEELIAQEPLAQRTGSRLLVLDGDTGG---VRHSQFSRLIDLLEPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L GV+ + + + + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGVK-----QTGGRVEILIERLLEGGSALAHVRASKSPKPGAAILITPD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E +V + G L + + + +G +PLPPYI R DA+D Y
Sbjct: 113 DQSDATEFSVRVEGRRGA-LFELVVDSGSWPQILKTLGHMPLPPYIE--RSDDAQDRQRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +++++ + S GIK VTLHVGAGTF PV+ E+ DH M
Sbjct: 170 QTVFARRDGAVAAPTAGLHFDAHMIADIESRGIKTTEVTLHVGAGTFQPVRAENIADHHM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ + GR+V+VGTT++R LETA + G + +SG +NIF+ PG
Sbjct: 230 HSEWLEVNDEVVAAVQRCREAKGRVVAVGTTAVRSLETAA-QGGALRRFSGDSNIFLYPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
F VD +++NFHLP+STL+MLV+AF G ET YQ A+ YRF+SYGD + ++
Sbjct: 289 QPFNVVDAMVTNFHLPESTLIMLVAAFAGHRETMSAYQEAVDQRYRFFSYGDAMFVTARQ 348
>gi|330969090|gb|EGH69156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aceris str. M302273PT]
Length = 354
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 SGEAEMVARHDA--------LFELRFAEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|254369121|ref|ZP_04985133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FSC022]
gi|157122071|gb|EDO66211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FSC022]
Length = 340
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 133/357 (37%), Positives = 207/357 (57%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVED- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ R + D Y
Sbjct: 114 -----TLAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYMK--RDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAA TAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAALTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDIESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|193068706|ref|ZP_03049667.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E110019]
gi|192958069|gb|EDV88511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E110019]
Length = 356
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 198/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGTIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|257465430|ref|ZP_05629801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor 202]
gi|257451090|gb|EEV25133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor 202]
Length = 363
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 199/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP + IA P+ R ++RL+ ++ +D +DL L+ D +V
Sbjct: 1 MLVSDFHFDLPDNLIARYPMPDRTASRLLYLNGETG---EFADQHFTDLLDHLHEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L F
Sbjct: 58 FNNTRVIPARLYGQKIS-----GGKVEALIERVLDEHRCLAHVRASKAPKEGTQLIFGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ + + L F L + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGLVATMAARHDTLFELHFESQ-TNLFDLLQSAGHMPLPPYI--DRPDEDADQER 169
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF + +L +L G+ FVTLHVGAGTF PV+VE+ DH
Sbjct: 170 YQTVYSKVLGAVAAPTAGLHFDNVMLEKLKEKGVNTAFVTLHVGAGTFQPVRVENILDHK 229
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNI 295
MH+E + + K+ G R+++VGTTS+R +E+A D +I P+ T+I
Sbjct: 230 MHAEYAEVSQDVVDKILETKANGKRVIAVGTTSVRSIESAAQAVKNSDTLIEPFFSDTSI 289
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG F+ VD L++NFHLP+STL+MLVSAF G + T YQHA+ YRF+SYGD
Sbjct: 290 FIYPGKTFKVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQHAVESQYRFFSYGDAMF 349
Query: 356 L 356
+
Sbjct: 350 I 350
>gi|313677065|ref|YP_004055061.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase [Marivirga
tractuosa DSM 4126]
gi|312943763|gb|ADR22953.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Marivirga
tractuosa DSM 4126]
Length = 348
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 133/361 (36%), Positives = 195/361 (54%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF F+LP +A P RD A+LMV+H + I D+ + + D +V
Sbjct: 1 MKLSEFKFELPLKLVAQHPAEDRDLAKLMVLHKDTG---EIEHKTFKDIVDYFDEGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L + + W V P++ I+ G+ L+F
Sbjct: 58 TNNTKVFPARLYGNK----EKTGAQIEVFLLRELNKEMHLWDVLVDPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARD 176
G L A VID + + F G + + + +G PLP YI RP++ D
Sbjct: 113 ---GDGELVAEVIDNTTSRGRTIKFLYDGDDQDFYKLVDSLGETPLPKYIK--RPVEEAD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT YA+ G+VAAPTAG+HFT +L R+ GIK +TLH+G GTF PV VED
Sbjct: 168 RERFQTIYAEEVGAVAAPTAGMHFTRQVLKRMELKGIKTSPITLHIGLGTFRPVDVEDLT 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE + TA+ +N + R+ +VGTT++R +E++ T + + G+T+ F
Sbjct: 228 KHKMDSENFKVPVKTAELVNESLNSKKRVCAVGTTAMRSMESSVTANNRLKENEGWTDRF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + L++NFH+P+STLLM+ +AF G + YQ AI H YRF SYGD L+
Sbjct: 288 IFPPYEFKICNALLTNFHMPESTLLMMAAAFGGYDNVMNAYQEAIKHKYRFLSYGDAMLI 347
Query: 357 F 357
Sbjct: 348 I 348
>gi|221133849|ref|ZP_03560154.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Glaciecola
sp. HTCC2999]
Length = 346
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 129/362 (35%), Positives = 201/362 (55%), Gaps = 21/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F LP IA P R ++RL+ + I+ H ++ F+ + D ++
Sbjct: 1 MKTSDFGFTLPEHLIAKYPTQQRSASRLLHLDGKTGA---IAHHQFKNMLQFVEAGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLLGQKS-----TGGKIEVLVERMLDDHRVLAHVKSSKSPKPGAQLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EAT++ + G + + + + G +PLPPYI RP + D Y
Sbjct: 110 --EEVIEATMLGR--HGALFELEFSGNESVLDLLEAHGHMPLPPYI--DRPDEDGDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L+++ G+++ FVTLHVGAGTF PVKV++ ++H+M
Sbjct: 164 QTVYNEKPGAVAAPTAGLHFDDEILAQIKDKGVQIEFVTLHVGAGTFQPVKVDNVEEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+ G R+++VGTTS+R LE+A + +I P+ T IF
Sbjct: 224 HAEYAEVPDAVVAAIKATKAAGKRVIAVGTTSMRSLESAAKKADATNELIVPFYEDTEIF 283
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+ F+ VD + +NFHLP+STL+ML+SA G E + Y AI+H YRF+SYGD+ +
Sbjct: 284 IYPGFEFKVVDAMFTNFHLPESTLMMLISALAGKENVMQAYAEAIAHEYRFFSYGDSMFI 343
Query: 357 FQ 358
+
Sbjct: 344 EK 345
>gi|119945875|ref|YP_943555.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Psychromonas ingrahamii 37]
gi|119864479|gb|ABM03956.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Psychromonas ingrahamii 37]
Length = 351
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 206/363 (56%), Gaps = 21/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LPP+ IA P+ R ++RL+ V N + +DL ++ ND ++
Sbjct: 4 MKVSDFSFELPPALIARYPMKDRSASRLLSVEGNSG---ELKHLQFTDLVDLIDENDLLI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + +I + + S+ + R SK K G L
Sbjct: 61 FNDTRVIPARLFGEKE-----TGGKIEVLVERVLDDKSFLAHLRSSKSPKPGCKLRL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ ++A ++ + G + + G + + +G +PLPPYI RP + D Y
Sbjct: 113 --ENSIDAVMLKR--QGPLFEIHIDHGSTVLEVLESIGHMPLPPYI--DRPDEDADKERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF ++++L G+ FVTLHVGAGTF PVKV++ DH M
Sbjct: 167 QTVYNKNPGAVAAPTAGLHFDQAVMTKLQDKGVDFAFVTLHVGAGTFQPVKVDNILDHQM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
HSE + +N+ K++GGR+++VGTTS+R +E+A + P+ T+IF
Sbjct: 227 HSEYAEVSQEVIDKINTTKAKGGRVIAVGTTSVRSVESAAQVSVKMGNDLAPFFSETSIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ +D L++NFHL +STLLMLVSAF G E Y+ AI YRF+SYGD L
Sbjct: 287 IYPGYQFQIIDALVTNFHLSESTLLMLVSAFSGKENIDNAYKVAIQEKYRFFSYGDAMFL 346
Query: 357 FQK 359
+K
Sbjct: 347 TKK 349
>gi|86133031|ref|ZP_01051618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dokdonia
donghaensis MED134]
gi|85816428|gb|EAQ37619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dokdonia
donghaensis MED134]
Length = 349
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 142/361 (39%), Positives = 198/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD +RLMV++ I + DL + D +V
Sbjct: 1 MKLSHFNFDLPDELLAEHPAENRDESRLMVLNRKEQT---IEHKMFKDLIDYFEPEDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++++ +G PLP YI R ++ D
Sbjct: 114 DDES---LVAEVIDNTTSRGRTLRFLYDGSYEEFRKKLTSLGETPLPKYIN--REVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF V+VED
Sbjct: 169 EERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHVGLGTFSAVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +I P + +N S R+ +VGTT++R++E+A + G +N +SG+TN F
Sbjct: 229 KHKMDSEEAYIRKPATEIINKAISEKRRVCAVGTTAMRVMESAVSSSGTLNEFSGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + K+ Y A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMITNFHTPKSTLLMMVSAFAGHDFMKRAYDEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|261340999|ref|ZP_05968857.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cancerogenus ATCC 35316]
gi|288316863|gb|EFC55801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cancerogenus ATCC 35316]
Length = 356
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 194/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPMPERSSCRLLSLDGPTG---ELTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ D V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ESTKATMTARHDALFE-----VEFNDERTVLDILNAIGHMPLPPYIE--RPDEESDRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLEKLRAKGIEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPWSGFTNIFIT 298
HSE + A+ + K+RG +V+VGTTS+R LE+A P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGSSVVAVGTTSVRSLESAAQAAKTDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMTAYKSAVEQKYRFFSYGDAMFIT 344
>gi|261868461|ref|YP_003256383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413793|gb|ACX83164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 363
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 194/363 (53%), Gaps = 17/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I SD+ +N D ++
Sbjct: 1 MRVADFYFDLPDELIARYPKTERTASRLLQLDGENG---EIFHRTFSDVLDLINPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKSS-----GGKIEVLVERVLSESRFLAHVRASKAPKEGAELILGED 112
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ G + + + L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGHGVNAVMVGRQGSLFEIEIAEKQTALFDVLQKIGHMPLPPYI--DRPDEEADQER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLTKLKAKGVNFTFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN------PWSGFT 293
MH+E + A+ + + G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVPQEVCDAILATQKAGKRVIAVGTTSVRSIESAALAAEEKKSAVLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKSFRVVDCLITNFHLPESTLIMLVSAFAGFSYTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLL 356
+
Sbjct: 351 MFI 353
>gi|62260381|gb|AAX77902.1| unknown protein [synthetic construct]
Length = 375
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 208/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 29 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 85
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 86 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVED- 139
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ R + D Y
Sbjct: 140 -----TLAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYMK--RDDEEFDAERY 190
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 191 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 250
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 251 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 309
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 310 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 366
>gi|89072679|ref|ZP_01159244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium sp. SKA34]
gi|89051499|gb|EAR56953.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium sp. SKA34]
Length = 350
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 141/363 (38%), Positives = 202/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R ++RL+ + N ++ D+ + + D +V
Sbjct: 1 MQVSDFDFDLPDELIARYPQPERTASRLLQMTGNTG---ELAHKGFKDVLDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARMFGHKAS-----GGKIEVLVERMLDDKSILAHVRASKPPKPGNELLLGE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A ++ + + + + S + + VG +PLPPYI RP + D Y
Sbjct: 112 --NGEFSAEMVARHDA--LFEIRFNSDKTVLEILDAVGHMPLPPYI--DRPDEDTDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V+D +DH M
Sbjct: 166 QTVYNTKPGAVAAPTAGLHFDDKLMANLKAKGVNFAFVTLHVGAGTFQPVRVDDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED----GIINPWSGFTNIF 296
HSE + A+N ++ GGRI++VGTTS+R LE+A + P+ G T IF
Sbjct: 226 HSEYVEVPEEVVTAVNETRANGGRIIAVGTTSVRSLESAAQDAIKNCTEFKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD L++NFHLP+STL+MLVSAF G E T Y A+++ YRF+SYGD+ +
Sbjct: 286 IYPGYQFQLVDALITNFHLPESTLIMLVSAFAGYENTMNAYHEAVANRYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TRK 348
>gi|119897199|ref|YP_932412.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Azoarcus
sp. BH72]
gi|166216698|sp|A1K3X0|QUEA_AZOSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|119669612|emb|CAL93525.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Azoarcus
sp. BH72]
Length = 345
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 146/360 (40%), Positives = 201/360 (55%), Gaps = 22/360 (6%)
Query: 1 MMVK--EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
M + +FD+DLPP IA P+ R ++RL+VV + V++D DLP F+ D
Sbjct: 1 MTLSLQDFDYDLPPDLIAQAPLAERSASRLLVVDGD-----VLADRRFVDLPDFIRPGDL 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+T+V+ A+L GV+ ++ + + + R SK K G L
Sbjct: 56 LVFNDTRVLHARLFGVKA-----TGGQVEVLVERPIGAHEALAQIRASKSPKPGSTLRLA 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L +GE + + + G +PLPPYI R D
Sbjct: 111 DAVDVTVL-------GRSGEFFHLRFPDDENVVDVLERYGKLPLPPYIQ--RAAGDADEA 161
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ GSVAAPTAGLHF +L RL + G +VTLHVGAGTF PV+V+D H
Sbjct: 162 RYQTVFARAPGSVAAPTAGLHFDDAVLDRLRARGAGCAWVTLHVGAGTFQPVRVDDLAQH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I T +A+ ++ GGR+V+VGTTS+R LE A + SG T+IFI
Sbjct: 222 RMHSERYVIPQETVEAIARTRANGGRVVAVGTTSMRALEAAAQAG-PLAAGSGETDIFIL 280
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RFR D+L++NFHLPKSTLLMLVSAF G + ++ Y HA++ YRF+SYGD LL +
Sbjct: 281 PGFRFRVADMLVTNFHLPKSTLLMLVSAFSGTDVIRRAYAHAVASRYRFFSYGDAMLLTR 340
>gi|126728575|ref|ZP_01744390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sagittula
stellata E-37]
gi|126710505|gb|EBA09556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sagittula
stellata E-37]
Length = 354
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 161/360 (44%), Positives = 226/360 (62%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR +ARL+V VISD V++LP +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPARPRTAARLLVCDGG-----VISDATVAELPDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R E +I TL + WS +P K ++ G+I+ F
Sbjct: 56 LNDTQVIPARLSGVRRRVGEAGETEAQIEVTLLEPRADGCWSALLKPLKKVRDGEIVRFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
LEA ++ + G+ +L F+++ + + ++ G +PLPPYIA +RP DA+D
Sbjct: 116 DD-----LEAMLMSR-QDGQAILRFNLAAADFDAALNAAGAMPLPPYIAARRPADAQDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTA LHF +LL R+ +G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNRGAVAAPTASLHFDESLLKRIADMGVAFTHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + ++ GGR++ VGTT+LRL+E+A E G I P+ G T+IFI
Sbjct: 230 RMHGEWGEVTPQAAAEIAATRAAGGRVIPVGTTALRLIESAARE-GEIAPFHGVTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTLLMLVSA G + +++Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFSFNVTDALMTNFHLPKSTLLMLVSALMGQDCIREVYAHAVAEDYRFFSYGDASLLIP 348
>gi|332174857|gb|AEE24111.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 350
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 135/364 (37%), Positives = 201/364 (55%), Gaps = 23/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EF FDLP + IA P R ++RLM + +S +D+ +N D ++
Sbjct: 1 MKVSEFQFDLPEALIARYPTKERTASRLMHL-----AKTGLSHLQFTDVVDLINPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + V + + R SK K+G L
Sbjct: 56 FNNTRVIPARLLGQKAS-----GGKVEVLIERIVDEHHVLAHVRASKSPKEGSQLLL--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++E ++ + + L + ++ + + G +PLPPYI RP + D Y
Sbjct: 108 --EDKVEMEMVGRQDALFKLKL--LNPEPILEILEQYGHMPLPPYI--DRPDEESDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L +L G+ FVTLHVGAGTF PV+V++ +H M
Sbjct: 162 QTVYNEKPGAVAAPTAGLHFDDAILQKLKDKGVSTEFVTLHVGAGTFQPVRVDNILEHQM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGII-NPWSGFTNIF 296
HSE + A+ K+ G R+++VGTTS+R LE+A + +G P+ T+IF
Sbjct: 222 HSEYAEVPQNVIDAIAKTKAAGKRVIAVGTTSVRSLESAAKAASSNGTELAPFFSDTDIF 281
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHL +STL+MLVSAF G E YQ AI+ YRF+SYGD +
Sbjct: 282 IYPGYQFQVVDAMLTNFHLSESTLIMLVSAFAGKENVMSAYQEAIAQQYRFFSYGDAMFI 341
Query: 357 FQKR 360
+ +
Sbjct: 342 EKNQ 345
>gi|222032200|emb|CAP74939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli LF82]
gi|312944982|gb|ADR25809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O83:H1 str. NRG 857C]
Length = 356
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGCKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|21243247|ref|NP_642829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
axonopodis pv. citri str. 306]
gi|24212185|sp|Q8PJL6|QUEA_XANAC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21108780|gb|AAM37365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
axonopodis pv. citri str. 306]
Length = 356
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 142/364 (39%), Positives = 203/364 (55%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P+ P ++D V DLP L D ++
Sbjct: 1 MKKSDFHYDLPDELIAQAPLAERAASRLLVVPPS---PQALADRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE + G +PLPPYI R+ ++ Y
Sbjct: 113 GQAEVL-------GRDGEFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVED--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTEAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFAAYHHAIAQRYRFFSYGDAML 343
Query: 356 LFQK 359
L+ +
Sbjct: 344 LWGR 347
>gi|222056534|ref|YP_002538896.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. FRC-32]
gi|254764278|sp|B9M5N6|QUEA_GEOSF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221565823|gb|ACM21795.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. FRC-32]
Length = 343
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 135/359 (37%), Positives = 203/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+F++ LPP IA P R+SARLM + I + +V+D+ + + D +V
Sbjct: 1 MQLKDFNYHLPPELIAQEPAHRRESARLMTLDRKSG---EIGEGVVADIAEYFVAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G + + L R W + SK G ++
Sbjct: 58 INDTKVIPARLLGRKE-----TGGKAEVFLVRRRDEAGQVWQCLIKCSKSPAPGSLILLS 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A ++++ ++ FS ++ ++G++PLPPYI RP + D
Sbjct: 113 EG-----VTARIVERSEHDTWIVSFS-PEEGFLDRLEMIGSMPLPPYI--HRPANVIDGE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ +G+VAAPTAGLHFT +LL ++ + G+ + +TLHVG GTFMPV+V+D +H
Sbjct: 165 RYQTVFARERGAVAAPTAGLHFTESLLQKIRARGVDILPLTLHVGLGTFMPVRVKDLSEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E I TA+A+ K G R++++GTT+ R LE A EDG ++ G +IFI
Sbjct: 225 RMHREYYRIPETTAKAVTDRKKAGKRVIALGTTTTRALEHAAAEDGSLDAKEGEADIFIV 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLP+STLLMLVSAF G + Y A+ +RF+SYGD ++
Sbjct: 285 PGYAFKTVDALITNFHLPESTLLMLVSAFAGRDRLFNAYAEAVRRKFRFFSYGDAMFIY 343
>gi|34496443|ref|NP_900658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chromobacterium violaceum ATCC 12472]
gi|46576922|sp|Q7NZD4|QUEA_CHRVO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|34330296|gb|AAQ58662.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chromobacterium violaceum ATCC 12472]
Length = 340
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 154/359 (42%), Positives = 217/359 (60%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP + IA P R ++RL+ V +SD +DLP+ L + D +V
Sbjct: 1 MQLSDFDYHLPEALIAQHPPAERGASRLLHVDGMT-----LSDLSFADLPSRLQAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + ++ + R SK K G L F
Sbjct: 56 FNDTRVIRARLFGEKAS-----GGKVEALIERVLDDHTALAHVRASKSPKPGSRLIF--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
R EA ++++ ++ + + ++ + + G +PLPPYI R + D Y
Sbjct: 108 --AGRWEAEMVERHDS--MFKLRFLAEENVYDILEASGKLPLPPYIE--RSAEHDDDERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ QG+VAAPTAGLHFT +L+ L + GI FVTLHVGAGTF PVKV++ +H M
Sbjct: 162 QTVYAREQGAVAAPTAGLHFTDAMLATLQAQGIATAFVTLHVGAGTFQPVKVDNVAEHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI I T A+ + ++RGGR+V+VGTTS+R LE+A G + G T+IFITPG
Sbjct: 222 HSEIYDIPQATVDAIAAARARGGRVVAVGTTSVRALESAARH-GELKAGRGETDIFITPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR VD L++NFHLPKSTLLMLVSAF G +E + Y+HA+ YRF+SYGD LL +K
Sbjct: 281 YRFRVVDRLLTNFHLPKSTLLMLVSAFAGYDEIFQAYRHAVEKEYRFFSYGDAMLLEKK 339
>gi|170726109|ref|YP_001760135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
woodyi ATCC 51908]
gi|238688701|sp|B1KNG3|QUEA_SHEWM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169811456|gb|ACA86040.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
woodyi ATCC 51908]
Length = 345
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 199/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R S+RL+ + N + D+ +D+ +N D +V
Sbjct: 1 MRVTDFSFELPDELIARYPMPERTSSRLLSLEGNSG---KLGDNQFTDILDMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K +
Sbjct: 58 FNNTRVIPARLFGQKE-----TGGKLEILVERMLDDKRILAHVRSSKSPKVNTKVCL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E T++ + + L + + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYEMTMLARHDALFELELND--EKTILEVLEKVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF LL+RL G+ FVTLHVGAGTF PVKV+D DH M
Sbjct: 164 QTVYNDAPGAVAAPTAGLHFDDALLNRLKEKGVDTAFVTLHVGAGTFQPVKVDDVLDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ GGR+++VGTTS+R LE+A + + P+ T+IFI P
Sbjct: 224 HSEWAEVSQEVVDKIAHTKAHGGRVIAVGTTSVRSLESAAKASEDELQPFCRDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYEFKVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|330975882|gb|EGH75948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 354
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKDS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLDAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|218767560|ref|YP_002342072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis Z2491]
gi|21263920|sp|Q9JW05|QUEA_NEIMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|121051568|emb|CAM07866.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria meningitidis Z2491]
Length = 346
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 207/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+ L+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSHLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYIE--RAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGR 340
>gi|78048252|ref|YP_364427.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|91207334|sp|Q3BS36|QUEA_XANC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78036682|emb|CAJ24373.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 356
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 140/362 (38%), Positives = 198/362 (54%), Gaps = 22/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R ++RL+VV P P D V DLP L D ++
Sbjct: 1 MKKSDFHYELPEELIAQAPLAERAASRLLVVPP---APAAFGDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGEREARVQIGASKSPKAGSVIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE + G +PLPPYI R+ ++ Y
Sbjct: 113 GQAEVL-------GRDGEFYLLRFQIPTPLEHWLLEAGRLPLPPYIRREPGVED--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HKEWLNVGATLVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTEAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+V AF G E Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVCAFAGRERIFAAYHHAIAQRYRFFSYGDAML 343
Query: 356 LF 357
L+
Sbjct: 344 LW 345
>gi|148260342|ref|YP_001234469.1| queuosine biosynthesis protein [Acidiphilium cryptum JF-5]
gi|326403533|ref|YP_004283615.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acidiphilium multivorum AIU301]
gi|166216693|sp|A5FY68|QUEA_ACICJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146402023|gb|ABQ30550.1| Queuosine biosynthesis protein [Acidiphilium cryptum JF-5]
gi|325050395|dbj|BAJ80733.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acidiphilium multivorum AIU301]
Length = 345
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 164/358 (45%), Positives = 220/358 (61%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LPP RIA P PR +ARL+ V + + D + DLPA L D +V
Sbjct: 1 MNLADFDYHLPPERIAAEPARPRHAARLLHVRGDG-----LDDRTILDLPALLAPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R + I TL ++ +W V R ++ + G+ +
Sbjct: 56 VNDTRVIPAQLTGRR------GDARIGITLDRPLADGTWRVLLRNARRARPGETIAI--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + A VID+ G L F + ++ LPPYI R I +D DY
Sbjct: 107 DGAGGIAAEVIDRAPDGSATLRFDCDAETFRAMLDRAASLALPPYIPRPAGISEQDRQDY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A +G+VAAPTAGLHFT +L+ L + G+ + VTLHVGAGTF+PV+ + + H +
Sbjct: 167 QTMFAAEEGAVAAPTAGLHFTETVLAALAARGVGLATVTLHVGAGTFLPVREDQLERHKL 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I TA +N+ ++RGGRIV+VGTTSLR+LETA +DG + PW G T +FITPG
Sbjct: 227 HAERGLIGPETAALVNATRARGGRIVAVGTTSLRVLETAAGDDGTLAPWHGETELFITPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF+ VD LM+NFHLPKSTLLMLV+AF G+E + Y HAI+ YRFYSYGD SLL +
Sbjct: 287 YRFKLVDRLMTNFHLPKSTLLMLVAAFAGVERMRAAYAHAIARGYRFYSYGDASLLER 344
>gi|309750338|gb|ADO80322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Haemophilus influenzae R2866]
Length = 363
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 138/364 (37%), Positives = 201/364 (55%), Gaps = 17/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ IS SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKIDRVSCRLLQLNGENG---EISHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTHVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGTELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGDA 350
Query: 354 SLLF 357
+
Sbjct: 351 MFIT 354
>gi|294664106|ref|ZP_06729501.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292606127|gb|EFF49383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 356
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 142/364 (39%), Positives = 205/364 (56%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P+ P ++D V DLP L D ++
Sbjct: 1 MKKSDFHYDLPDELIAQAPLAERAASRLLVVPPS---PQALADRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 58 FNDTRVIPARLFGHKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE + G +PLPPYI R+ ++ Y
Sbjct: 113 GQAEVL-------GRDGEFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVED--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H+E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTEAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E Y+HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFAAYRHAIAQRYRFFSYGDAML 343
Query: 356 LFQK 359
L+ +
Sbjct: 344 LWGR 347
>gi|163792636|ref|ZP_02186613.1| Queuosine biosynthesis protein [alpha proteobacterium BAL199]
gi|159182341|gb|EDP66850.1| Queuosine biosynthesis protein [alpha proteobacterium BAL199]
Length = 349
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 169/363 (46%), Positives = 225/363 (61%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD+ LP RIA P PRD+ARL+ + ++D ++DLP L D ++
Sbjct: 1 MRVDLFDYHLPEERIARFPANPRDTARLLDL-----TGDRLADRTIADLPDLLQPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R E ++ TLH R W +ARP+K ++ GD + F
Sbjct: 56 ANDTRVIPARLDGKR------GEAKVEVTLHKRDGDAVWRAFARPAKKLRPGDRITFAQD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V K GE+ L F +G L ++ G +PLPPYI R+ D DY
Sbjct: 110 -----LTAEVTAKGEAGEVTLSFDTAGPALMEALAAYGRMPLPPYIKRQADEIQDDARDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT LL+R+ + G++ VTLHVGAGTF+PVKV+DT DH+M
Sbjct: 165 QTVFAARDGAVAAPTAGLHFTPELLARIEARGVRRALVTLHVGAGTFLPVKVDDTADHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE G + + TA A+ ++ GGR+V+ GTT+LR+LE A D + WSG T++F
Sbjct: 225 HSEWGSVPSETAAAVAETRAAGGRVVATGTTTLRILEAAAQTTAPGDDAVPAWSGETDLF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+L++NFHLP+STLLMLVSAF G E Y HAI YRF+SYGD LL
Sbjct: 285 ITPGYRFRAVDLLLTNFHLPRSTLLMLVSAFSGRERILAAYDHAIRTGYRFFSYGDACLL 344
Query: 357 FQK 359
++
Sbjct: 345 ARE 347
>gi|188991189|ref|YP_001903199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris str. B100]
gi|229619925|sp|B0RRR0|QUEA_XANCB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167732949|emb|CAP51145.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris]
Length = 356
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 143/364 (39%), Positives = 201/364 (55%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P P SD V DLP L D ++
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERAASRLLVVPP---TPAAFSDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G ++ +
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQIGASKSPKAGSVIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE + G +PLPPYI R+ +D Y
Sbjct: 113 GQAEVL-------GRDGEFYLLRFDIPAPLEHWLLDAGRLPLPPYIRREPGLDD--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDALDKHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-----DGIINPWSGFTNI 295
H+E + A + + ++RGGR+++VGTT +R LE+A + G + P++G T I
Sbjct: 224 HTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDDAPHGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STLLM+VSAF G + Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGCDRIFAAYAHAIAQRYRFFSYGDAML 343
Query: 356 LFQK 359
L+ +
Sbjct: 344 LWSR 347
>gi|89256118|ref|YP_513480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica LVS]
gi|156502136|ref|YP_001428201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|167010805|ref|ZP_02275736.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FSC200]
gi|290953183|ref|ZP_06557804.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica URFT1]
gi|295313598|ref|ZP_06804186.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica URFT1]
gi|122500926|sp|Q2A472|QUEA_FRATH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167016407|sp|A7NB92|QUEA_FRATF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|89143949|emb|CAJ79168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica LVS]
gi|156252739|gb|ABU61245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FTNF002-00]
Length = 338
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 133/357 (37%), Positives = 207/357 (57%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVED- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ R + D Y
Sbjct: 112 -----TLAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYMK--RDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAA TAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAALTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVITIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|92114949|ref|YP_574877.1| S-adenosylmethionine [Chromohalobacter salexigens DSM 3043]
gi|122419294|sp|Q1QTN0|QUEA_CHRSD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91798039|gb|ABE60178.1| S-adenosylmethionine [Chromohalobacter salexigens DSM 3043]
Length = 356
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 201/360 (55%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P R RL+ + I+ +DL L D +V
Sbjct: 1 MQRADFHFDLPDELIARYPSETRSDCRLLCLDDATGD---IAHRRFTDLLTLLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + L + + + R SK + G L F
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEMLLERPLDAHRGLAHLRASKAPRPGTELIF-EG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + +EA + + + + + G +PLPPYI R + D Y
Sbjct: 112 DVHAVVEARH------DALFELRFLGETPMIELLENHGHMPLPPYI--DREDELDDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHF + L+ L G+++ +VTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTVYARREGAVAAPTAGLHFDTPLMEALRERGVEMGYVTLHVGAGTFQPVRVDDIREHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
HSE +D + + + ++RGGR+++VGTTS+R LETA+ EDG I P+ G T+IFI
Sbjct: 224 HSEWLEVDETLCRQVEATRARGGRVIAVGTTSVRCLETASQGQEDGHIAPFRGDTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY++R VD L++NFHLP+STLLMLVSAF G + + Y+ A++ Y F+SYGD L +
Sbjct: 284 PGYQWRCVDALITNFHLPESTLLMLVSAFAGYPQVMRAYRAAVAERYAFFSYGDAMFLNR 343
>gi|326346059|gb|EGD69798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. 1125]
Length = 356
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDELLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|51102921|gb|AAT96070.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|57234386|ref|YP_181528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dehalococcoides ethenogenes 195]
gi|91207421|sp|Q3Z8C1|QUEA_DEHE1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57224834|gb|AAW39891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dehalococcoides ethenogenes 195]
Length = 343
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 201/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA +P PRDS+RL+V++ + D+ + D +V
Sbjct: 1 MKTSDFDYNLPQEYIAQKPAEPRDSSRLLVLNRQSGELKSC---IFRDITGYFQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ G++ +I L W +P K K G I+ Q
Sbjct: 58 MNNSRVLPARIKGIK----QDTSAKIEILLLKSDGNGCWEALLKPGKRTKPGTIIDIRKQ 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQ ++A V+ G LL FS + + +G +PLPPYI Y
Sbjct: 114 DGQIHIQAEVLADKEDGIKLLRFSDETL-----LMKLGEVPLPPYIHTPVSD----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT LL RL +G+ +VTLH+G TF PVK ED DHI+
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTPELLERLGDMGVICTYVTLHIGLDTFRPVKEEDPSDHII 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H E G + A TA A+ K+ G R+ VGT++ RL+E A++ ++GII +SG+ ++FI
Sbjct: 225 HREYGILSAETAAAICQAKANGKRVFCVGTSATRLVEQASSLSQNGIIELYSGWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ D ++NFHLP+ST LML +AF G +K Y+ AI+ YRFYS+GD L+
Sbjct: 285 PGYKFKVADCFITNFHLPRSTPLMLTAAFAGWPLLQKAYEKAINEHYRFYSFGDAMLVL 343
>gi|152968929|ref|YP_001334038.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206577784|ref|YP_002240128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae 342]
gi|238893341|ref|YP_002918075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae NTUH-K2044]
gi|288936877|ref|YP_003440936.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Klebsiella
variicola At-22]
gi|290510067|ref|ZP_06549437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. 1_1_55]
gi|330006899|ref|ZP_08305771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. MS 92-3]
gi|166216728|sp|A6T5D7|QUEA_KLEP7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713843|sp|B5Y0Y7|QUEA_KLEP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150953778|gb|ABR75808.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206566842|gb|ACI08618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae 342]
gi|238545657|dbj|BAH62008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288891586|gb|ADC59904.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Klebsiella
variicola At-22]
gi|289776783|gb|EFD84781.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. 1_1_55]
gi|328535653|gb|EGF62102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. MS 92-3]
Length = 354
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 203/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +D+ LN D +V
Sbjct: 1 MRVTDFAFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDILDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IKATMLAR--HGALFEVEFNDERPVLEILNGIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ ++H M
Sbjct: 166 QTVYGTRPGAVAAPTAGLHFDEPLLDKLRAKGVEMAFVTLHVGAGTFQPVRVDSIEEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYQVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKVAVEQKYRFFSYGDAMFIT 344
>gi|325927082|ref|ZP_08188352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
perforans 91-118]
gi|325542581|gb|EGD14053.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
perforans 91-118]
Length = 356
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 140/362 (38%), Positives = 199/362 (54%), Gaps = 22/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R ++RL+VV P P D V DLP L D ++
Sbjct: 1 MKKSDFHYELPEELIAQAPLAERAASRLLVVPP---APAAFGDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGEREARVQIGASKSPKAGSVIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE + G +PLPPYI R+ ++ Y
Sbjct: 113 GQAEVL-------GRDGEFYLLRFQIPTPLEHWLLEAGRLPLPPYIRREPGVED--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H+E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTEAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+V AF G E Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVCAFAGRERIFAAYHHAIAQRYRFFSYGDAML 343
Query: 356 LF 357
L+
Sbjct: 344 LW 345
>gi|187732638|ref|YP_001879112.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii CDC 3083-94]
gi|238689510|sp|B2U4K6|QUEA_SHIB3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187429630|gb|ACD08904.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii CDC 3083-94]
Length = 356
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDMVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|167463103|ref|ZP_02328192.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus larvae subsp. larvae BRL-230010]
Length = 354
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 196/360 (54%), Gaps = 25/360 (6%)
Query: 11 PPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQ 70
P IA P+ R +RLM ++ I H DL +L + D +V N+T+VI A+
Sbjct: 1 PEELIAQTPLSDRTQSRLMTLNKETG---EIGHHTFKDLADYLKAGDLLVLNDTRVIPAR 57
Query: 71 LNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF--SQDGQSRLEA 128
L G++ ++ L + N W RP K IK G L F ++ + L A
Sbjct: 58 LFGLK----KDTGAKVELLLLKDLGDNRWEALVRPGKKIKTGAELVFGTQAEADEPVLSA 113
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
V ++ G ++ FS GI + +G +PLPPYI + YQT +AK
Sbjct: 114 IVEEEGEMGARIVRFSYRGI-FNEILDRLGEMPLPPYIKEQLND----RERYQTVFAKHA 168
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
GS AAPTAGLHFT L L G+++ F+TLHVG GTF PV V+ +DH +H+E +
Sbjct: 169 GSAAAPTAGLHFTEEFLEGLRGQGVRIAFITLHVGLGTFRPVSVDRVEDHNIHAEYYILS 228
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGII--------NPWSGFTNIFI 297
TA+ +N +++GGR+++VGTTS R LETA G I + SG+T+IFI
Sbjct: 229 EETARLVNETRAQGGRVIAVGTTSARTLETAAGLSHSQGYIDGEGRTLLHACSGWTSIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FRAVD L++NFHLPKSTLLMLVSA + Y A+ + YRF+S+GD ++
Sbjct: 289 YPGYEFRAVDGLLTNFHLPKSTLLMLVSALASRKYILHAYAEAVKNRYRFFSFGDAMFIY 348
>gi|16759382|ref|NP_454999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142847|ref|NP_806189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213163212|ref|ZP_03348922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213650157|ref|ZP_03380210.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213854740|ref|ZP_03382980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|289825047|ref|ZP_06544399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|21263879|sp|Q8Z8Y1|QUEA_SALTI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|25318245|pir||AD0552 S-adenosylmethionine,tRNA ribosyltransferase-isomerase [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16501673|emb|CAD08860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29138479|gb|AAO70049.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
Length = 354
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|77359285|ref|YP_338860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas haloplanktis TAC125]
gi|91207395|sp|Q3ILB9|QUEA_PSEHT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|76874196|emb|CAI85417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Pseudoalteromonas haloplanktis
TAC125]
Length = 343
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 207/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ + V+ + SDL +N ND +V
Sbjct: 1 MRVADFSFDLPDELIARFPKQDRTSSRLLSLDGPSG---VVEHKVFSDLLELVNENDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + + R SK +K G+ +
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKVEVLVERVLDEHRVLAHVRASKSLKPGNEVIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + +AT++ + +T + + + ++ +G +PLPPYI RP + D Y
Sbjct: 110 --EGKAKATMVARHDT--LFELEFEHSQNVLDILNDIGHMPLPPYI--DRPDNEADRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ L + G+++ FVTLHVGAGTF PV+V D+HIM
Sbjct: 164 QTVYGEKPGAVAAPTAGLHFDDKLMTALKNKGVQMAFVTLHVGAGTFQPVRVATVDEHIM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + A+ + K+ GGR++++GTTS+R LE+A G ++ + G T+IFI P
Sbjct: 224 HSEYIEVPDDVVAAVANTKANGGRVIAIGTTSVRSLESAAKVHGGKLDTYFGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +++NFHLP+STL+MLVSAF G Y AI YRF+SYGD L +K
Sbjct: 284 GYQFNVVDAMITNFHLPESTLIMLVSAFAGQNNIMGAYNTAIEQQYRFFSYGDAMFLTRK 343
>gi|145639843|ref|ZP_01795444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittII]
gi|145271061|gb|EDK10977.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittII]
Length = 362
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 138/364 (37%), Positives = 201/364 (55%), Gaps = 17/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ IS SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKIDRVSCRLLQLNGENG---EISHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTHVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGTELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGDA 350
Query: 354 SLLF 357
+
Sbjct: 351 MFIT 354
>gi|332160717|ref|YP_004297294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318604592|emb|CBY26090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664947|gb|ADZ41591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330862453|emb|CBX72610.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Yersinia
enterocolitica W22703]
Length = 362
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D ++
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGA---LTHGIFTDLLDKLVPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ + VG +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMLAR--HDTLFELRFDDERDVFTILDAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSQRLGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A +++G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKASDNGLIAPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|315634692|ref|ZP_07889976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter segnis ATCC 33393]
gi|315476640|gb|EFU67388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter segnis ATCC 33393]
Length = 363
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 199/363 (54%), Gaps = 17/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ I +D+ ++ D ++
Sbjct: 1 MRVADFYFDLPDELIARYPKTERTASRLLQLNGENGD---IFHRTFADVLELIHPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKIS-----GGKIEVLVERVLSESRFLAHVRASKAPKEGAELILGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ ++ + + L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGNGVKALMVGRQGSLFEIEIAEKQTALFDVLQQIGHMPLPPYI--DRPDEEADQER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLAKLKEKGVNFAFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A D +I P+ T
Sbjct: 231 MHAEYVEVSQEVCDAIFATKKAGKRVIAVGTTSVRSIESAALAAEEKQRDVLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLL 356
+
Sbjct: 351 MFI 353
>gi|307825676|ref|ZP_07655893.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacter tundripaludum SV96]
gi|307733253|gb|EFO04113.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacter tundripaludum SV96]
Length = 339
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 135/356 (37%), Positives = 204/356 (57%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP + IA +P+ RD++RL+ + N+ I D +D +N D ++
Sbjct: 1 MKKSDFNYQLPDALIAQKPLAERDASRLLCMDRNIGG---IVDRQFTDFIDLINERDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + ++ + + + + R SK K G ++
Sbjct: 58 FNDTKVIPARLFGTKQS-----GGKVEILIERILDEHHAIAHVRASKSSKAGTLIELDKG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++ + L + +G IPLPPYI R D D Y
Sbjct: 113 YCCEVL-------GRVDDLFQLEFKGDNSLLSILEQIGHIPLPPYIT--REDDQSDLTRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF ++ +L + G++ FVTLHVG+GTF PV+VE+ +H+M
Sbjct: 164 QTVFAREAGAVAAPTAGLHFDQAMMEKLKARGVQSAFVTLHVGSGTFQPVRVENLSEHLM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + T A+ K+RGGR++++GTT++R LE+A+ + G++ G T++FITPG
Sbjct: 224 HKEYFVVLPETVAAVQQAKARGGRVIAIGTTAVRALESAS-KSGLLEAGFGDTDLFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+FR+VD +++NFHLP+STLLMLVSAF G E Y HAI +YRF+SYGD L
Sbjct: 283 YQFRSVDAMLTNFHLPESTLLMLVSAFAGYEHIMNAYSHAIDQSYRFFSYGDAMFL 338
>gi|241762411|ref|ZP_04760490.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|241373098|gb|EER62747.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 342
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 177/359 (49%), Positives = 230/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQGMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEGKK------NQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDFGQD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 110 -----VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIESAADEMGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFQVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|90579387|ref|ZP_01235197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
angustum S14]
gi|90440220|gb|EAS65401.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
angustum S14]
Length = 350
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 141/363 (38%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R ++RL+ + N ++ D+ + + D +V
Sbjct: 1 MQVSDFDFDLPDELIARYPQPERTASRLLQMTGNTG---ELAHKGFKDVLDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARMFGHKAS-----GGKIEVLVERMLDDKSILAHVRASKPPKPGNELLLGE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A ++ + + + + S + + VG +PLPPYI RP + D Y
Sbjct: 112 --NGEFSAEMVARHDA--LFEIRFNSDKTVLEILDAVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V+D +DH M
Sbjct: 166 QTVYNAKPGAVAAPTAGLHFDDKLMADLKAKGVNFAFVTLHVGAGTFQPVRVDDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE + A+N ++ GGRI++VGTTS+R LE+A + P+ G T IF
Sbjct: 226 HSEYVEVPEEVVTAVNETRANGGRIIAVGTTSVRSLESAAQDALKNGTEFKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+++ YRF+SYGD+ +
Sbjct: 286 IYPGYQFQLVDVLITNFHLPESTLIMLVSAFAGYENTMNAYHEAVANKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TRK 348
>gi|331656459|ref|ZP_08357421.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA206]
gi|331054707|gb|EGI26716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA206]
Length = 356
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDELLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|198245410|ref|YP_002214358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|207855886|ref|YP_002242537.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|226713848|sp|B5FKQ9|QUEA_SALDC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713849|sp|B5QTF3|QUEA_SALEP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197939926|gb|ACH77259.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|206707689|emb|CAR31973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|326622107|gb|EGE28452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
Length = 354
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 202/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|157146979|ref|YP_001454298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
koseri ATCC BAA-895]
gi|166216713|sp|A8AK49|QUEA_CITK8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157084184|gb|ABV13862.1| hypothetical protein CKO_02756 [Citrobacter koseri ATCC BAA-895]
Length = 356
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 197/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDARPVLEILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDDPLLAALREKGIEMAFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG RI++VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRIIAVGTTSVRSLESAAQAAKNDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEQNYRFFSYGDAMFIT 344
>gi|51102958|gb|AAT96106.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETTFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|149178742|ref|ZP_01857325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Planctomyces maris DSM 8797]
gi|148842440|gb|EDL56820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Planctomyces maris DSM 8797]
Length = 351
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 142/358 (39%), Positives = 201/358 (56%), Gaps = 13/358 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P RD +RL+++ I+ +SDLP +LN +D +V N
Sbjct: 4 LNDFDYQLPPELIATEPTQQRDQSRLLILDRKSQS---ITHGSISDLPRYLNPDDCLVLN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V++A+L G R + S W + ++ + GDI+
Sbjct: 61 NTRVLSARLFGTRQS----TGGKWEGLYLGSNSLGEWKLMSKTRGKLNPGDIIELRPAHQ 116
Query: 123 ---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++ ++ K G + S + ++ GT+PLPPY+ R +
Sbjct: 117 RSLEKQVTLKLLSKDTEGYWTALVK-SDEDHHSLLAHFGTMPLPPYMKRNLATEEDW-ER 174
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA G+VAAPTAGLHFT LL R + G ++ VTLHVG GTF P+ VE + H
Sbjct: 175 YQTVYAAQPGAVAAPTAGLHFTPELLERCTAQGTRIANVTLHVGIGTFKPISVETLEAHK 234
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A +A+ LN + +GGRIV VGTTS+R LE+ + G + W G T+IFI P
Sbjct: 235 MHSEWCELSAESAELLNQSRQQGGRIVCVGTTSVRTLES-VAQQGPLQAWQGETDIFIYP 293
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+AVD L++NFHLPKSTLL+LVSAF G E + Y+ A+ YRFYSYGD L+
Sbjct: 294 PYQFQAVDCLLTNFHLPKSTLLVLVSAFAGAEFICEAYKKAVEAEYRFYSYGDAMLIL 351
>gi|26246410|ref|NP_752449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli CFT073]
gi|227884587|ref|ZP_04002392.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 83972]
gi|300988043|ref|ZP_07178523.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 45-1]
gi|301049605|ref|ZP_07196556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 185-1]
gi|29427792|sp|Q8FKC5|QUEA_ECOL6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|26106808|gb|AAN78993.1|AE016756_176 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli CFT073]
gi|227838673|gb|EEJ49139.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 83972]
gi|300298598|gb|EFJ54983.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 185-1]
gi|300407595|gb|EFJ91133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 45-1]
gi|307552310|gb|ADN45085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ABU 83972]
gi|315294216|gb|EFU53567.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 153-1]
Length = 356
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 198/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPLFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|51102892|gb|AAT96042.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|91774778|ref|YP_544534.1| S-adenosylmethionine [Methylobacillus flagellatus KT]
gi|91708765|gb|ABE48693.1| S-adenosylmethionine [Methylobacillus flagellatus KT]
Length = 344
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 206/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P R +RL+ + N ++D L DLP + D +
Sbjct: 3 MRTNDFDFFLPDELIAQFPAKERRGSRLLHLDGNTG---QVNDRLFLDLPDLVEPGDLFI 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + +I + + P + R S+ K G IL
Sbjct: 60 FNDTRVIKARLHGEKLS-----GGKIEVLVERVLGPFEALAHIRASRAPKPGSILRIAD- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + ++ + + + L + G++PLPPYI ++ D Y
Sbjct: 114 ----AFEAEMLGR--QDDLFHLRILGDLPLLDLLEQHGSLPLPPYITHD--AESTDEERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF + +L L +G+ + +VTLHVGAGTF PV+V++ +H M
Sbjct: 166 QTVYAREPGAVAAPTAGLHFDNAMLDGLKRLGVNIAYVTLHVGAGTFQPVRVDNISEHKM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + T ++ ++ GG++ +VGTT+LR LE+A G + G T+IFITPG
Sbjct: 226 HSELYSVPQHTVDMIHQTRATGGKVTAVGTTALRALESAAQP-GTLQAGQGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ V+ L++NFHLPKSTLLMLVSAF G+E + Y HA++ YRF+SYGD L+ ++
Sbjct: 285 YRFQVVERLLTNFHLPKSTLLMLVSAFAGVEHIRNAYAHAVTARYRFFSYGDAMLIERQ 343
>gi|194432534|ref|ZP_03064820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1012]
gi|194419095|gb|EDX35178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1012]
gi|320181613|gb|EFW56528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii ATCC 9905]
gi|332085662|gb|EGI90826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 155-74]
gi|332094555|gb|EGI99601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii 5216-82]
Length = 356
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|229592462|ref|YP_002874581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens SBW25]
gi|259551475|sp|C3K1N5|QUEA_PSEFS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|229364328|emb|CAY52079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens SBW25]
Length = 349
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 203/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRASRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELKFAEEVLPLLERVGHMPLPPYI--DRPDEDSDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL + + G++ +VTLHVGAGTF PV+V++ +DH M
Sbjct: 162 QTVYSQRLGAVAAPTAGLHFDQPLLDAIAAKGVETAYVTLHVGAGTFQPVRVDNIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + K+RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVEACKARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET YQ AI + YRF+SYGD + +
Sbjct: 281 RPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYQAAIDNGYRFFSYGDAMFITR 338
>gi|264680590|ref|YP_003280500.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni CNB-2]
gi|262211106|gb|ACY35204.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni CNB-2]
Length = 362
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 151/367 (41%), Positives = 203/367 (55%), Gaps = 23/367 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP S IA P R ++RL+ L +D + +LP L D +VFN
Sbjct: 10 LSDFDFDLPESLIAQHPTAVRSASRLL-----DGRSLPPTDRIFRELPDLLQPGDLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + +I + + N + R SK G +H
Sbjct: 65 DTKVIKARVFGEKAS-----GGKIELLVERVLQNNEVVAHMRVSKKPLPGAKIHLCGGLK 119
Query: 123 QSRLEATVIDKWNTGEILLVFS----ISGIELERQISLVGTIPLPPYIAR-----KRPID 173
EAT++ +W G L G + G +PLPPYI R P +
Sbjct: 120 NGGFEATLLGRWPDGNGPLFHLSFKGNQGESPYELLEQFGHLPLPPYIERQQNAEHDPDE 179
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PVK E
Sbjct: 180 KEDSERYQTVFAAHPGAVAAPTAALHFDETVLAALQAKGVERASVTLHVGAGTFQPVKTE 239
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DH MHSE I PT A+ + RGGRI++VGTT++R LE+ I SG T
Sbjct: 240 KLADHTMHSEWYDIPLPTLAAMERCRQRGGRIIAVGTTTVRTLESWAKYGNI----SGDT 295
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG++++ VD+L++NFHLPKSTL+MLVSAF G E MYQHAI+ YRF+SYGD+
Sbjct: 296 SIFITPGFQYQVVDMLITNFHLPKSTLMMLVSAFAGYEHIMGMYQHAIAQHYRFFSYGDS 355
Query: 354 SLLFQKR 360
LL ++R
Sbjct: 356 MLLERRR 362
>gi|254786638|ref|YP_003074067.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Teredinibacter turnerae T7901]
gi|237683820|gb|ACR11084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Teredinibacter turnerae T7901]
Length = 359
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 139/358 (38%), Positives = 195/358 (54%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F + LP IA P R ++RL+V+ + + L +NS D +V
Sbjct: 1 MRRQDFFYSLPDELIARYPTQDRTASRLLVLD---GASGEVEHSQFASLLERVNSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + +I + + + + R SK K G IL
Sbjct: 58 FNDTRVIPARLFGKKS-----TGGQIEILVERVLDSHRVYAHVRSSKSPKAGAILVLEDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
V G + + + +G +PLPPYI R +A+D Y
Sbjct: 113 T-------EVTMTAREGALFTLEFPRHASALEVMERIGHMPLPPYI--DRADEAQDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K +G+VAAPTAGLHF LL L + G++V FVTLHVGAGTF PV+ ++ DH M
Sbjct: 164 QTVYGKNKGAVAAPTAGLHFDDALLEALKAKGVEVAFVTLHVGAGTFQPVRADNIRDHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ ++D ++ + K RGGR+++VGTTS+R LE+A G + P+ G TNIFI P
Sbjct: 224 HSEVMWVDQAVCDSVAATKVRGGRVIAVGTTSVRCLESAAAS-GHLQPYQGDTNIFIYPS 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FR VD L++NFHLP+STLLML+SAF G T Y A+ YRF+SYGD + +
Sbjct: 283 YEFRVVDALVTNFHLPESTLLMLISAFAGYTNTMNAYAQAVQEKYRFFSYGDAMFVTR 340
>gi|113461459|ref|YP_719528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
somnus 129PT]
gi|170718434|ref|YP_001783652.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
somnus 2336]
gi|123132213|sp|Q0I4R7|QUEA_HAES1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038526|sp|B0UWJ9|QUEA_HAES2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|112823502|gb|ABI25591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
somnus 129PT]
gi|168826563|gb|ACA31934.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Haemophilus somnus 2336]
Length = 356
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 132/365 (36%), Positives = 204/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P R S+R++ ++ + SD+ +N D ++
Sbjct: 1 MYLSDFYFDLPDELIARYPKRERSSSRMLQLNGQNG---ELFHRTFSDVADLINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + ++ + + + R SK K+ +L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERVLNEHHFLAHIRSSKSPKENTVLFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ + ++ + L S L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGKGVEMLMKARHENLFELELSDKSTALLDILQKIGHMPLPPYI--DRPDEDADKER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLTQLKNKGVNFAFVTLHVGAGTFQPVRVENIEDHK 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K++G R+++VGTTS+R +E+A ++ P+ T
Sbjct: 231 MHAEYVEVPQEVVDAVLATKAKGKRVIAVGTTSVRSIESAALFAEENNSTHLLEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR +D L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVIDCLITNFHLPESTLIMLVSAFAGYQHTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFITK 355
>gi|257467859|ref|ZP_05631955.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium ulcerans ATCC 49185]
gi|317062148|ref|ZP_07926633.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium ulcerans ATCC 49185]
gi|313687824|gb|EFS24659.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium ulcerans ATCC 49185]
Length = 343
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 135/356 (37%), Positives = 194/356 (54%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP I +P PRD ARLM+V+ I D+ +LN D +V
Sbjct: 4 LLSDYDYHLPEKLIGQQPREPRDHARLMLVNRKN---ESIEHKKFYDIIDYLNEGDILVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + L R+ ++W +P+K +K G L
Sbjct: 61 NSTKVIPARLFGHKE-----TGGVLEILLIKRIDLDTWECLLKPAKKLKVGQKLFIGHG- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L +++ + G ++ F+ G E + +G +PLPPYI ++ YQ
Sbjct: 115 --NELIGELLEIKDDGNRIIKFTYEG-AFEEVLDRLGKMPLPPYIVEA----LKEKDRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA SVAAPTAGLHFT LL ++ GIK+ + L VG GTF PV+ E+ +H MH
Sbjct: 168 TVYAIKGESVAAPTAGLHFTKELLEKIEKKGIKIVDIFLEVGLGTFRPVQTENVLEHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E+ I A +N K G RI+SVGTTS R LE+A E+G++ G T IFI PG+
Sbjct: 228 EEVYEIPQEAADIINEGKKNGKRIISVGTTSTRALESAVDENGLVKALKGSTEIFIYPGF 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ +D L++NFHLPKSTLLMLVSA E K+Y A+ Y F+S+GD ++
Sbjct: 288 EFKVIDALITNFHLPKSTLLMLVSALSSREFMLKVYDIAVKEEYHFFSFGDAMFIY 343
>gi|222637741|gb|EEE67873.1| hypothetical protein OsJ_25689 [Oryza sativa Japonica Group]
Length = 1723
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 201/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL++V P P +D V DLP+ L D +V
Sbjct: 1381 LKKSDFHYDLPAELIAQAPLAERSASRLLLVPP---APDGFTDLQVRDLPSLLQPGDLLV 1437
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G + +
Sbjct: 1438 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQVGASKSPKAGSRIALDAG 1492
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE ++ LE+ + G +PLPPYI R+ +D Y
Sbjct: 1493 GEAEVL-------GRDGEFYVLQFHVPESLEQWLLHAGRLPLPPYIQREPGVDD--RERY 1543
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+ L + G++ VTLHVGAGTF PV+ +D DH+M
Sbjct: 1544 QTVFAREVGAVAAPTAGLHFDEPLLAALKNKGVEFGHVTLHVGAGTFQPVRADDLKDHVM 1603
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITPG
Sbjct: 1604 HREWLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESAMR-DGELLPFAGETQIFITPG 1662
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YR R+VD +++NFHLP+STLLM++SAF G + + YQHAI YRF+SYGD LLF +
Sbjct: 1663 YRIRSVDAMVTNFHLPESTLLMMISAFAGKDRVFEAYQHAIEQRYRFFSYGDAMLLFPQ 1721
>gi|66044475|ref|YP_234316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae B728a]
gi|76803813|sp|Q9L6W2|QUEA_PSEU2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|63255182|gb|AAY36278.1| Queuosine biosynthesis protein [Pseudomonas syringae pv. syringae
B728a]
Length = 354
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 199/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLERVGRMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + +SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKSFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|295398599|ref|ZP_06808631.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aerococcus
viridans ATCC 11563]
gi|294973200|gb|EFG48995.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aerococcus
viridans ATCC 11563]
Length = 374
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 137/355 (38%), Positives = 196/355 (55%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+FDFDLP IA P+ R +++L+ + D D+ + L + D +V N
Sbjct: 5 TNDFDFDLPEELIAQVPIQDRLASKLLKLDAQTGD---FQDGHFPDVASELEAGDVLVLN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G+R I L + W +P++ I+ G + F G
Sbjct: 62 NTRVLPARLQGIRP----DTGGHIEVLLLNNTEGDKWETLVKPARRIRVGTEIVF----G 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L A V + G ++ F +GI + +G +PLPPYI K + YQT
Sbjct: 114 NGQLVAVVTEVLEHGGRIVEFKYNGI-FLEVLEALGEMPLPPYIKEK----LDNPDRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLHFT ++ L G+++ ++TLHVG GTF PV V+D D H MHS
Sbjct: 169 VYAKENGSAAAPTAGLHFTEEFMADLKDRGVEIAYLTLHVGLGTFRPVSVDDIDAHKMHS 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E +D A + + G ++++VGTTS+R LET T+ G + SG+T+IFI PGY
Sbjct: 229 EFYRLDQENAAKIRRAQEGGHKVIAVGTTSIRTLETIGTKFKGQVQADSGWTDIFIAPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F V+ ++NFHLPKSTL+MLVSAF G + YQHA+ YRF+S+GD L
Sbjct: 289 QFSVVEGFITNFHLPKSTLIMLVSAFAGRDHVLAAYQHAVEEKYRFFSFGDAMFL 343
>gi|283784223|ref|YP_003364088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
rodentium ICC168]
gi|282947677|emb|CBG87232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
rodentium ICC168]
Length = 356
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 198/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R S RL+ + ++ +DL A LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSSCRLLSLDGPTGA---LTHGTFTDLLAKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDARPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEQKYRFFSYGDAMFIT 344
>gi|322419806|ref|YP_004199029.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. M18]
gi|320126193|gb|ADW13753.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. M18]
Length = 341
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 136/356 (38%), Positives = 194/356 (54%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLPP IA P RD++RL+ + + V+ + + + D +V
Sbjct: 1 MRLSDFDYDLPPELIAQHPASRRDASRLLTLDRSNGAVGE---TTVAAIASRFRAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + E+ + WS + SK K G +
Sbjct: 58 LNDTRVIPARLKGQKESGGA---AEVFLVRRVPGDAEIWSCLIKASKSPKDGTRIILPEG 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ATV+ + GE ++F + + G++PLPPYI R D Y
Sbjct: 115 -----VTATVVSR-EEGEWQVLF-QGCDDFMCWLEGAGSMPLPPYIK--RAPAGEDLERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +L + G+++ VTLHVG GTFMPV+VE+ H M
Sbjct: 166 QTVFAREKGAVAAPTAGLHFTPEILDEIRGRGVEIAPVTLHVGLGTFMPVRVEELSRHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E+ I TA+A+ +S GGR++++GTTSLR LE A G + +IFI PG
Sbjct: 226 HRELYRIPEATARAIRRTRSAGGRVIALGTTSLRALEHAAAS-GELAAGEREADIFILPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLPKSTL MLV AF G E Y+ A+ +RF+SYGD +
Sbjct: 285 YRFRVVDALITNFHLPKSTLFMLVCAFAGKEVMLDAYREAVERRFRFFSYGDAMFI 340
>gi|238791401|ref|ZP_04635039.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
intermedia ATCC 29909]
gi|238729017|gb|EEQ20533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
intermedia ATCC 29909]
Length = 361
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 6 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLTPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 63 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 118 ES---IRATMLAR--HDTLFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K G+VAAPTAGLHF +L+ L + GI++ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 171 QTVYSKRPGAVAAPTAGLHFDEPMLAALRAKGIEMAFVTLHVGAGTFQPVRVDTIEEHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 231 HSEYAEVPQDVVDAVLACKARGNRVVAVGTTSVRSLESAAKAAQNSLIAPFFGDTRIFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 291 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 350
>gi|332042759|gb|EGI78959.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Lacinutrix
algicola 5H-3-7-4]
Length = 354
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 137/361 (37%), Positives = 192/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD +RLMV++ I DL + + D ++
Sbjct: 6 MKLSHFNFDLPEELLAEYPSENRDESRLMVLNRKEQT---IEHKQFKDLIDYFDEEDVMI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 63 LNNTKVFPARLFGNK----EKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKLYFG 118
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++ +G PLP YI R ++ D
Sbjct: 119 DDES---LVAEVIDNTTSRGRTLRFLYDGSYKEFRNKLKELGETPLPKYIK--RDVEPED 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAG+HF+ +LL RL GI VTLHVG GTF PV+VED
Sbjct: 174 EDRYQTIFAKNEGAVAAPTAGMHFSKHLLKRLEIKGIDFAEVTLHVGLGTFNPVEVEDLS 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I T + +N RI +VGTT++R +E+A + +N G+TN F
Sbjct: 234 KHKMDSEEVTIGPKTVERINRALKDKKRICAVGTTAMRAVESAVSSSNTLNEIDGWTNKF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+ SAF G + K+ Y+ A+ Y+FYSYGD L+
Sbjct: 294 IFPPYDFSIANCMITNFHTPKSTLLMMASAFAGHDFIKRAYEEAVKEKYKFYSYGDAMLI 353
Query: 357 F 357
Sbjct: 354 I 354
>gi|218688268|ref|YP_002396480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ED1a]
gi|254764277|sp|B7MPG6|QUEA_ECO81 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218425832|emb|CAR06638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ED1a]
Length = 356
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRIFAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|91207335|sp|Q5GZY2|QUEA_XANOR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 356
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 140/364 (38%), Positives = 202/364 (55%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P+ P ++D DLP L D ++
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERAASRLLVVPPS---PQALADRRARDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L G L+ LE + G +PLPPYI R+ ++ Y
Sbjct: 113 GQAEVL-------GRDGAFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVED--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYHHAIAQRYRFFSYGDAML 343
Query: 356 LFQK 359
L+ +
Sbjct: 344 LWSR 347
>gi|51103036|gb|AAT96182.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 199/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + + GGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRECGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|161504410|ref|YP_001571522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|189038876|sp|A9MM58|QUEA_SALAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|160865757|gb|ABX22380.1| hypothetical protein SARI_02521 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 356
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---NIHATMTAR--HGALFEVEFNDERPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDKPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G E T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYEHTMNAYKAAVEQKYRFFSYGDAMFIT 344
>gi|317056882|ref|YP_004105349.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ruminococcus albus 7]
gi|315449151|gb|ADU22715.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ruminococcus albus 7]
Length = 355
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 130/359 (36%), Positives = 187/359 (52%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA PV PR+++R++ + + +L L D +V
Sbjct: 7 MKRSDFFYELPQELIAQTPVEPRNASRMLCLDRFTG---EVGHDHFYNLCDHLKKGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G I L + + W + RP K + G F
Sbjct: 64 LNDSRVLPARIYGE----TEDTHSFIEFLLVEQRANMEWEILCRPGKKARVGRRFVF--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L A + + G + F L + +G +PLPPYI K
Sbjct: 117 -GDGLLRAEITEVLEDGNRIARFECDDSTNLFAALDEIGQMPLPPYITEKLKD----KER 171
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+ GS AAPTAGLHFT L+ + ++G+ + +VTLHVG GTF PVK + DH
Sbjct: 172 YQTVYSNEIGSSAAPTAGLHFTKEQLADIEAMGVNIAYVTLHVGLGTFRPVKEDKVLDHK 231
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + TA +N K+ GGR+++VGTTS R LE+ G I P GFT IFI P
Sbjct: 232 MHREHYELPKRTADLINKTKAEGGRVIAVGTTSCRTLESVAALYGDIRPCDGFTEIFIYP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G+ F+ +D L++NFHLP+STL+MLVSAF G E T Y+ A+ YRF+S+GD+ +
Sbjct: 292 GFEFKVLDGLITNFHLPESTLIMLVSAFAGYENTMNAYKIAVEEKYRFFSFGDSMFIAP 350
>gi|115314592|ref|YP_763315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica OSU18]
gi|254367443|ref|ZP_04983469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica 257]
gi|122325383|sp|Q0BMK6|QUEA_FRATO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115129491|gb|ABI82678.1| queuine tRNA-ribosyltransferase [Francisella tularensis subsp.
holarctica OSU18]
gi|134253259|gb|EBA52353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica 257]
Length = 340
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 133/357 (37%), Positives = 207/357 (57%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVED- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ R + D Y
Sbjct: 114 -----TLAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYMK--RDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAA TAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAALTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVITIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|237730380|ref|ZP_04560861.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Citrobacter sp. 30_2]
gi|226905919|gb|EEH91837.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Citrobacter sp. 30_2]
Length = 356
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 205/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFTFELPESLIAHYPQAERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IKATMVARHDA--LFEVEFNDERSVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL++L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDDPLLAKLRDKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD +
Sbjct: 286 PGYKYQVIDALVTNFHLPESTLIMLVSAFAGYKNTMHAYHEAVKAEYRFFSYGDAMFIT 344
>gi|296445819|ref|ZP_06887771.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylosinus trichosporium OB3b]
gi|296256647|gb|EFH03722.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylosinus trichosporium OB3b]
Length = 371
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 194/358 (54%), Positives = 240/358 (67%), Gaps = 11/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF+LP IALRP PRDSARL+VV P+ SD VSDLP L DA+V
Sbjct: 24 MRVELFDFELPQEAIALRPASPRDSARLLVVPPD----GHFSDRSVSDLPQLLAPGDALV 79
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R +R I TL RV + W RP+K + G+ + F
Sbjct: 80 VNDTQVIHARLSGFRARGESR--AHIDATLIERVGADRWRALVRPAKKLGVGESVRFAEG 137
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LEA V++K GEIL FS++G L+ + G +PLPPYIA KR DARD DY
Sbjct: 138 -----LEARVVEKGENGEILFAFSLAGSALDAAVEASGVMPLPPYIAGKRAADARDEADY 192
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT L+ L + G+ ++ VTLHVGAGTF+PVK EDT +H M
Sbjct: 193 QTLFAARAGAVAAPTAGLHFTPRLVDALTARGVSLHSVTLHVGAGTFLPVKAEDTAEHRM 252
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA TA ALN ++RGGRIV+VGTT+LR+LE+A DG I+P++ T IFITPG
Sbjct: 253 HAEWGAIDAATADALNETRARGGRIVAVGTTALRVLESAAGADGRISPFADRTAIFITPG 312
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRAVD L++NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD LL +
Sbjct: 313 YRFRAVDALLTNFHLPRSTLFMLVSAFSGLERMKAAYAHAIGSGYRFYSYGDACLLER 370
>gi|90407016|ref|ZP_01215206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychromonas sp. CNPT3]
gi|90311887|gb|EAS39982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychromonas sp. CNPT3]
Length = 348
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 200/363 (55%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP IA P R ++RL+ + N + ++ + +D ++
Sbjct: 1 MKVADFSFQLPEQLIARYPTPERSASRLLSLEGNSG---QLQHLHFHNILDLIKKDDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G++ +I + + + + R SK K G L
Sbjct: 58 FNDTRVIPARLFGIK----AETGGKIEVLVERVLDEKRFLAHVRSSKSPKPGCKLLL--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ ++A ++ + G + + + + +G +PLPPYI RP + D Y
Sbjct: 111 --ENSIDAVMVKR--EGPLFEIQIDHPTSVLEVLESIGHMPLPPYI--DRPDEDADKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF +L +L + GI FVTLHVGAGTF PVKV++ DH M
Sbjct: 165 QTVYNKNPGAVAAPTAGLHFDQAILDKLQAKGIDFAFVTLHVGAGTFQPVKVDNILDHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
HSE+ + + + K+RGGRI++VGTTS+R +E+A + + P+ T+IF
Sbjct: 225 HSELAQVSQQVIDKIIAAKARGGRIIAVGTTSVRSIESAAKASIGQGLALAPYCAETDIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ +D +++NFHL +STLLMLVSAF G + YQ AI YRF+SYGD +
Sbjct: 285 IYPGYKFQLIDAMLTNFHLSESTLLMLVSAFAGKDNIDNAYQQAIKEEYRFFSYGDAMFI 344
Query: 357 FQK 359
+K
Sbjct: 345 TKK 347
>gi|87121911|ref|ZP_01077796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
sp. MED121]
gi|86162709|gb|EAQ63989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
sp. MED121]
Length = 355
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 134/358 (37%), Positives = 204/358 (56%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ FDLP S IA P+ R +RL+ + +S D+ + +N D +V
Sbjct: 1 MRVSDYHFDLPDSLIATYPMPERTGSRLLSLDGPSGD---LSHLDFCDVLSLVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + NS + + SK K G + +
Sbjct: 58 FNNTRVIQARMFGQKES-----GGKLEVLVERLLDENSVLAHVKCSKSPKPGSKISLGTD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ +A ++ + +T L + + VG +PLPPYI RP + D Y
Sbjct: 113 QGKT-YQAVMVKRHDT----LFELCFDDYVLDVLEEVGHMPLPPYIE--RPDENSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL+ L G+ + FVTLHVGAGTF PV+VE ++H M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDEALLNALKEKGVDIAFVTLHVGAGTFQPVRVETLEEHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E ++ + K++GGR+++VG+TS+R LE+A+ G + G T+IFI PG
Sbjct: 226 HAEYVEVEQSVVDKVTQTKAKGGRVIAVGSTSMRSLESASQS-GQLEMMKGDTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ VD +++NFHLP+STL+ML+SAF G ++ YQ AI + YRF+SYGD + +
Sbjct: 285 YEFKTVDAMVTNFHLPESTLIMLISAFAGYQQVMNAYQSAIDNEYRFFSYGDAMFISR 342
>gi|54307937|ref|YP_128957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium profundum SS9]
gi|46912363|emb|CAG19155.1| putative S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Photobacterium profundum SS9]
Length = 367
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 143/363 (39%), Positives = 199/363 (54%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I D+ S D V
Sbjct: 17 MQVSDFHFDLPNELIARYPQPERTASRLLQL---TGETGNIQHKGFKDVLDLAESGDLFV 73
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 74 FNNTRVIPARIFGRKAS-----GGKIEVLVERILDDKSILAHVRASKSPKPGNELLLGEN 128
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +A +I + + + S + + VG +PLPPYI RP + D Y
Sbjct: 129 D---DYQAEMIAR--HDTLFEIRFNSDKTVLEILEEVGHMPLPPYI--DRPDEDADKERY 181
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V++ DDH M
Sbjct: 182 QTVYNAKPGAVAAPTAGLHFDDKLMAALKAKGVNFAFVTLHVGAGTFQPVRVDNIDDHHM 241
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
HSE + A+N+ K+ GGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 242 HSEYVEVPQDVVDAVNATKANGGRIIAVGTTSVRSLESAAQDAVKKGTELVPFFGDTEIF 301
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+ + YRF+SYGD+ +
Sbjct: 302 IFPGYEFQLVDVLVTNFHLPESTLIMLVSAFAGYEHTMNAYLQAVDNKYRFFSYGDSMFI 361
Query: 357 FQK 359
++
Sbjct: 362 TRR 364
>gi|311280707|ref|YP_003942938.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Enterobacter cloacae SCF1]
gi|308749902|gb|ADO49654.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Enterobacter cloacae SCF1]
Length = 356
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 196/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSSCRLLSLDGPTGT---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + D V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ESINATMTARHDALFE-----VEFNDERPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVMAAKARGSRVIAVGTTSVRSLESAAQAAKKERIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYQIIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEQNYRFFSYGDAMFIT 344
>gi|237749372|ref|ZP_04579852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oxalobacter
formigenes OXCC13]
gi|229380734|gb|EEO30825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oxalobacter
formigenes OXCC13]
Length = 348
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 138/354 (38%), Positives = 193/354 (54%), Gaps = 22/354 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP IA P+ R ++RL++V I+D L L+ D +VFN
Sbjct: 9 LSDFDFDLPEELIAQFPLPERSASRLLLVD-----EKKIADSRFYHLIDHLSEGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKV+ A+ G + +I + + + R SK K G I+ +
Sbjct: 64 NTKVLKARFFGSKAS-----GGKIEILIERILDNRNALAKIRASKSPKAGSIIRI-DDEI 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + ++ + + G +PLPPYI R D+ D YQT
Sbjct: 118 DVSVTGRDGE--------FFILQFPSDIFKILEEHGHLPLPPYIE--RAADSFDEKRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ G+VAAPTAGLHF L+ +L GI ++TLHVGAGTF PV+ E+ +H MH+
Sbjct: 168 VFARELGAVAAPTAGLHFDDELMEKLRQKGISFAYLTLHVGAGTFQPVRSENLSEHQMHT 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T +A+ + + ++V VGTTSLR LE+A+ G + S T++FITPGY+
Sbjct: 228 EWYTIPEETVEAVKTAQQGKHKVVGVGTTSLRALESASQT-GKLKAGSNETSLFITPGYQ 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ VD L++NFHLPKSTLLMLVSAF G KK Y HAI+ YRF+SYGD LL
Sbjct: 287 FQTVDHLITNFHLPKSTLLMLVSAFAGYNLIKKAYAHAIAEKYRFFSYGDAMLL 340
>gi|163786383|ref|ZP_02180831.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Flavobacteriales bacterium ALC-1]
gi|159878243|gb|EDP72299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Flavobacteriales bacterium ALC-1]
Length = 349
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 198/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP +A P RD ARLMV++ I D+ + + D ++
Sbjct: 1 MKLSHFSFDLPEDLLAEHPSEHRDEARLMVLNREKQT---IEHKQFKDIIDYFDEGDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNQDQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + R+++ +G PLP YI R ++ D
Sbjct: 114 EDET---LVAEVIDNTTSRGRTLRFLYDGSYTDFRRKLTDLGETPLPKYIK--RDVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ +LL RL G+++ VTLHVG GTF PV+VED
Sbjct: 169 EERYQTIFAKNEGAVAAPTAGLHFSKHLLKRLEIKGVEMAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I A +N R+ +VGTTS+R +E++ + +G +N + G+TN F
Sbjct: 229 KHKMDSEEIVITPRAADIVNKGIETKRRVCAVGTTSMRTIESSVSSNGRLNEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+ SAF G + KK Y+ A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMITNFHTPKSTLLMMTSAFAGHDFMKKAYEEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|82542893|ref|YP_406840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii Sb227]
gi|91207402|sp|Q325J6|QUEA_SHIBS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81244304|gb|ABB65012.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella boydii Sb227]
gi|332098450|gb|EGJ03416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii 3594-74]
Length = 356
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFFFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|37527761|ref|NP_931106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|46576913|sp|Q7N0I3|QUEA_PHOLL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|36787197|emb|CAE16277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein QueA) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 355
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 204/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + ++ + +D+ LN+ D +V
Sbjct: 1 MRVSDFTFELPDEMIAHYPQPQRSGCRLLSLDGETGA---LTHGIFTDVLDKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K+G L
Sbjct: 58 FNNTRVIPARIFGRKA-----TGGKLEVLVERVLDDKRVLAHVRASKAPKEGTELLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L+AT++ + + + ++ + +G +PLPPYI RP + D Y
Sbjct: 113 ES---LKATMLAR--HDTLFEIRFDDERDVLSILDDIGHMPLPPYIN--RPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSERPGAVAAPTAGLHFDEPLLEALRKKGVEMVFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG ++V+VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNKVVAVGTTSVRSLESAAKACQDELIAPFFNDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGFEYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQEAVAEKYRFFSYGDAMFIRR 345
>gi|330446694|ref|ZP_08310346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490885|dbj|GAA04843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 350
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 202/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA P R ++RL+ + N ++ D+ + D +V
Sbjct: 1 MQVSDFDFELPDELIARYPQPERTASRLLQMTGNTG---ELAHKCFKDVLDLVQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARMFGHKAS-----GGKIEVLVERMLDDKSILAHVRASKPPKPGNELLLGE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A ++ + + + + S + + +VG +PLPPYI RP + D Y
Sbjct: 112 --NGEFSAEMVARHDA--LFEIRFNSDKTVLEILDIVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V D +DH M
Sbjct: 166 QTVYNAKPGAVAAPTAGLHFDDKLMADLKAKGVNFAFVTLHVGAGTFQPVRVNDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
HSE + A+N ++ GGR+++VGTTS+R LE+A + P+ G T+IF
Sbjct: 226 HSEYVEVPEEVVAAVNETRANGGRVIAVGTTSVRSLESAAQDALKKGTEFKPFFGDTDIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD L++NFHLP+STL+MLVSAF G E T Y A+++ YRF+SYGD+ +
Sbjct: 286 IFPGYQFQLVDALITNFHLPESTLIMLVSAFAGYENTMNAYHEAVANKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TRK 348
>gi|294493624|gb|ADE92380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IHE3034]
Length = 356
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDEKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G IPLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRLVLDILNSIGHIPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|88812647|ref|ZP_01127894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrococcus
mobilis Nb-231]
gi|88790063|gb|EAR21183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrococcus
mobilis Nb-231]
Length = 347
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 194/360 (53%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R ++RL+V+ D L L D +V
Sbjct: 1 MRVSDFHFELPDELIASTPLPERTASRLLVIDAATGAC---QDRRFDALVELLRRGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L GV+ + L + +S V+ R +K + G L
Sbjct: 58 VNDTRVIPARLYGVKES-----GGRVEVLLERLLDAHSALVHVRANKAPRPGTRLWL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+ + GE+ + + L + G +PLPPY+ +R D Y
Sbjct: 110 --EEALPALVLGR--QGELYRLRFETTEPLLELLERYGHVPLPPYL--RRADTPVDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF LL RL G+ VTLHVGAGTF P++ E + H M
Sbjct: 164 QTVFAARPGAVAAPTAGLHFDQALLQRLAQKGVAQARVTLHVGAGTFQPLRTERVEQHQM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E +D+ + +++GGR+V+VGTT +R LETA G + P+ G T++FI PG
Sbjct: 224 HAEYLEVDSAVCARVAQTRAQGGRVVAVGTTVVRALETAARS-GALQPYRGETDLFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR VD L++NFHLP S+LLMLV AF G E Y+HA++ YRFYSYGD + +
Sbjct: 283 YRFRTVDALITNFHLPGSSLLMLVCAFAGREPVLSAYRHAVAARYRFYSYGDAMFIHPAQ 342
>gi|145637221|ref|ZP_01792883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittHH]
gi|145269666|gb|EDK09607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittHH]
Length = 363
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 136/365 (37%), Positives = 200/365 (54%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDQGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDKNLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ Y F+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKQAVQEKYCFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|323343219|ref|ZP_08083450.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463283|gb|EFY08478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Erysipelothrix rhusiopathiae ATCC 19414]
Length = 343
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 197/356 (55%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R +RL+VV + + D ++ +LN D +V
Sbjct: 1 MNVNDFDFDLPEELIAQTPAEKRSESRLLVVDG-----MNLEDKRFYNIIDYLNEGDVLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + E L ++ + +KV+K G L F
Sbjct: 56 LNDTRVIAARLFGEKPETGAHVEL-----LILKFEGKTAECLVGNAKVVKLGTELSF--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + G GI + +G +PLPPYI + Y
Sbjct: 108 -GDGQLKAICTHVGDEGLRNFDLIFDGI-FLEILDELGQMPLPPYIHERLED----KERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++++GS AAPTAGLHFT LL + + GI + VTLHVG GTF PVKV++ +H M
Sbjct: 162 QTVYSRVEGSAAAPTAGLHFTPELLDAIQAKGITIAPVTLHVGLGTFRPVKVDNVLEHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN+ K G RI++VGTTS+R LET ++ G G + IFI PG
Sbjct: 222 HSEAYTMTQDTADILNTAKREGRRIIAVGTTSVRTLETVMSKYGTFKECQGNSEIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y ++AVD +++NFHLPKSTL+MLVSAF G EE Y+HA+ YRF+S+GD+ L
Sbjct: 282 YEWKAVDAIITNFHLPKSTLIMLVSAFMGKEEIDHAYKHAVDSKYRFFSFGDSMFL 337
>gi|5834352|gb|AAD53918.1|AF179611_2 S-adenosylmethionine tRNA ribosyltransferase [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 342
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 177/359 (49%), Positives = 230/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQEMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEGKK------NQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDFGQD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 110 -----VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+++A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIDSAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|16763784|ref|NP_459399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|161615412|ref|YP_001589377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167992250|ref|ZP_02573348.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168232374|ref|ZP_02657432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|168240223|ref|ZP_02665155.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|168465490|ref|ZP_02699372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194449792|ref|YP_002044438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194471655|ref|ZP_03077639.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197263896|ref|ZP_03163970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|238911462|ref|ZP_04655299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|21263884|sp|Q8ZRD9|QUEA_SALTY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038877|sp|A9MX31|QUEA_SALPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238693641|sp|B4T8P4|QUEA_SALHS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|16418908|gb|AAL19358.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|161364776|gb|ABX68544.1| hypothetical protein SPAB_03183 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194408096|gb|ACF68315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194458019|gb|EDX46858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|195631754|gb|EDX50274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197242151|gb|EDY24771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|205329469|gb|EDZ16233.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205333419|gb|EDZ20183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205340375|gb|EDZ27139.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|261245687|emb|CBG23483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267992113|gb|ACY86998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157016|emb|CBW16499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312911437|dbj|BAJ35411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321225129|gb|EFX50190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322614687|gb|EFY11616.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322618793|gb|EFY15681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623500|gb|EFY20339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629202|gb|EFY25981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322631922|gb|EFY28676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637340|gb|EFY34042.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322642026|gb|EFY38636.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647845|gb|EFY44320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652522|gb|EFY48876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653315|gb|EFY49648.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660536|gb|EFY56772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664688|gb|EFY60881.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669259|gb|EFY65409.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670805|gb|EFY66938.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678957|gb|EFY75012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322681985|gb|EFY78010.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685186|gb|EFY81183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323128722|gb|ADX16152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|323194466|gb|EFZ79661.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196998|gb|EFZ82140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203982|gb|EFZ88999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323206932|gb|EFZ91885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323210850|gb|EFZ95722.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214540|gb|EFZ99291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323223097|gb|EGA07440.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227047|gb|EGA11228.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230136|gb|EGA14256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233874|gb|EGA17963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238432|gb|EGA22490.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244120|gb|EGA28129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246280|gb|EGA30263.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251906|gb|EGA35769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257903|gb|EGA41582.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261084|gb|EGA44676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264986|gb|EGA48485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323272549|gb|EGA55956.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
Length = 354
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|39997714|ref|NP_953665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
sulfurreducens PCA]
gi|81701519|sp|Q749X2|QUEA_GEOSL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|39984606|gb|AAR35992.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
sulfurreducens PCA]
gi|298506648|gb|ADI85371.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
sulfurreducens KN400]
Length = 343
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 196/357 (54%), Gaps = 14/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V EFD+ LPP IA P+ RD+ RLM V + I + D +V
Sbjct: 1 MLVTEFDYHLPPELIAQEPLVQRDATRLMTVERDGGGIGEIP---FRGIVDLFRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + EI +W R SK + G +
Sbjct: 58 INDTRVIPARLLGRKESGG---KTEIFLVRRRPGDHETWHCLIRSSKPPRPGVTVLLPEG 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V + + L+ F+ G + + G +PLPPYI +R DA D Y
Sbjct: 115 -----VRAVVREPGDGETWLVSFT-PGEGFQEWLDRNGAMPLPPYI--RREADAADRDRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLH T+ LL + G++V VTLHVG GTFMP++VE +DH M
Sbjct: 167 QTVFARNRGAVAAPTAGLHMTAGLLDEIAGRGVRVAPVTLHVGLGTFMPIRVERLEDHRM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA A+N + GGR++++GTT R LE A DG I G +IFI PG
Sbjct: 227 HRERYHIPPATADAINGCRREGGRVIALGTTVCRTLEQAAAADGTIAAGEGEADIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+AVD L++NFHLPKSTLLMLVSAF G + + Y A++ +RF+SYGD +F
Sbjct: 287 YRFKAVDALITNFHLPKSTLLMLVSAFAGRDLLFRAYGEAVARRFRFFSYGDAMFIF 343
>gi|33152347|ref|NP_873700.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
ducreyi 35000HP]
gi|46576951|sp|Q7VLY1|QUEA_HAEDU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33148570|gb|AAP96089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
ducreyi 35000HP]
Length = 361
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 140/364 (38%), Positives = 204/364 (56%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP IA P R ++RL+ ++ SD SDL +N D ++
Sbjct: 1 MLVSDFHFNLPDELIARYPKDERTASRLLHLNGESG---KFSDLHFSDLLDHINPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLYGRKES-----GGKLEVLIERVLDEHHCLAHIRCSKAPKAGTKLILGED 112
Query: 121 --DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ LEAT+I + + + + L + G IPLPPYI RP + D
Sbjct: 113 KLGIGNGLEATMISR--HDTLFELRFNATTPLFTLLQQAGHIPLPPYI--DRPDEDFDQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + +L +L + G+ + FVTLHVGAGTF PV+VE+ +H
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNPMLDKLKAKGVNMAFVTLHVGAGTFQPVRVENILEH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K+ G R+++VGTTS+R +E+A +I P+ TN
Sbjct: 229 NMHAEYAEVTQAVVDQILATKAAGKRVIAVGTTSVRSIESAAQATQPTGKLIAPFFSDTN 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG F+ VD+L++NFHLP+STL+MLVSAF G T YQHA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFKIVDVLITNFHLPESTLIMLVSAFAGYRHTMNAYQHAVQQKYRFFSYGDAM 348
Query: 355 LLFQ 358
L+ +
Sbjct: 349 LINK 352
>gi|283834277|ref|ZP_06354018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
youngae ATCC 29220]
gi|291069802|gb|EFE07911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
youngae ATCC 29220]
Length = 354
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 205/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFTFELPESLIAHYPQAERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IKATMVARHDA--LFEVEFDDERSVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL++L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDERLLAKLREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIAPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYKNTMHAYHEAVKAEYRFFSYGDAMFIT 344
>gi|254523176|ref|ZP_05135231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas sp. SKA14]
gi|219720767|gb|EED39292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas sp. SKA14]
Length = 355
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 143/359 (39%), Positives = 200/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F++DLP IA P+ R ++RL++V P P +D V DLP+ L D +V
Sbjct: 13 LKKSDFNYDLPAELIAQAPLAERSASRLLLVPP---APAAFTDLQVRDLPSQLQPGDLLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G + +
Sbjct: 70 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQVGASKSPKAGSRIALDAG 124
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE ++ LE+ + G +PLPPYI R+ +D Y
Sbjct: 125 GEAEVL-------GRDGEFYVLQFHVPESLEQWLLHAGRLPLPPYIQREPGVDD--RERY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+ L G+ VTLHVGAGTF PV+ +D DH+M
Sbjct: 176 QTVFAREVGAVAAPTAGLHFDEPLLAALKDKGVDFGHVTLHVGAGTFQPVRADDLKDHVM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITPG
Sbjct: 236 HREWLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESAMR-DGELLPFAGETQIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YR R+VD +++NFHLP+STLLM++SAF G E + YQHAI YRF+SYGD LLF +
Sbjct: 295 YRIRSVDAMVTNFHLPESTLLMMISAFAGKERVFEAYQHAIEQRYRFFSYGDAMLLFPQ 353
>gi|254513957|ref|ZP_05126018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR5-3]
gi|219676200|gb|EED32565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR5-3]
Length = 352
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 202/359 (56%), Gaps = 13/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA +P+ R ++RL+ V S + +DLPA LN++D +V
Sbjct: 1 MQRSDFTYELPQELIAQQPLAERSASRLLCVDGRTS---EMVHRHFADLPALLNADDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L GV+ + + S + R SK + G + ++
Sbjct: 58 FNDTRVLPARLYGVKE-----TGGRVEILIERLTGETSALAHIRASKTPRAGQAIALAAE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V + GE L S L ++ +G +PLPPYI R I+ Y
Sbjct: 113 SDSPATDLQVRVEGREGE--LFQISSAQALGPMLARIGHMPLPPYIDRTDAIED--RERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF + LL L +G++ VTLHVGAGTF PV+ +D +H M
Sbjct: 169 QTVYAQRDGAVAAPTAGLHFDNALLQTLDEMGVRRAHVTLHVGAGTFQPVRSDDIREHQM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E ++ A+ + + GGR+V+VGTT++R LETA G + P+ G T +FI PG
Sbjct: 229 HAEYLEVNQSVCDAIAATRECGGRVVAVGTTAVRSLETAAAT-GQLAPYVGDTRLFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ VD +++NFHLP+STLLMLVSAFCG + Y A++ YRF+SYGD L +
Sbjct: 288 YAFQCVDAMITNFHLPESTLLMLVSAFCGRDLMLDAYNAAVAERYRFFSYGDAMFLTPQ 346
>gi|163753005|ref|ZP_02160129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kordia
algicida OT-1]
gi|161326737|gb|EDP98062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kordia
algicida OT-1]
Length = 351
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 146/360 (40%), Positives = 198/360 (55%), Gaps = 16/360 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ F+FDLP +A P RD ARLMV++ I DL + + D +V
Sbjct: 4 KLSHFNFDLPEDLLAEYPSEHRDEARLMVLNREKQT---IEHKKFKDLVDYFDEGDVMVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFFS 119
NNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 61 NNTKVFPARLFGNK----EKTGARIEVFLLRELNEDQRLWDVLVDPARKIRIGNKLYFGE 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDY 177
+ L A VID + L F G E ++ +G PLP YI R ++ D
Sbjct: 117 DES---LVAEVIDNTTSRGRTLRFLYDGSYEEFRTKLGELGQTPLPKYIK--RDVEPEDE 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF PV+VED
Sbjct: 172 ERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHVGLGTFNPVEVEDLSK 231
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H M SE I+AP +N+ K+R R+ +VGTT +R LE++ + D +N + G+TN FI
Sbjct: 232 HKMDSEELKIEAPAVATVNNAKTRKQRVCAVGTTVMRALESSVSSDLTLNEYEGWTNKFI 291
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F + +++NFH PKSTLLM+VSAF G E K Y+ AI Y+FYSYGD L+
Sbjct: 292 FPPYEFSIANCMITNFHTPKSTLLMMVSAFAGHEFILKAYEEAIKEGYQFYSYGDAMLIL 351
>gi|332184351|gb|AEE26605.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
cf. novicida 3523]
Length = 338
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 132/357 (36%), Positives = 207/357 (57%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD+++L+ ++ I+DH +DL F+ D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASKLLKLNRQTG---EIADHKFTDLIDFITPKDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSK-----TTGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVED- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + G IPLPPY+ R + D Y
Sbjct: 112 -----TLAKVLDK--DGGMYLLEIQGDKDIYHLMEEFGHIPLPPYMK--REDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF+ L+ ++ GI + ++TLHVG+GTF PV+V++ + H M
Sbjct: 163 QTVYAKDLGSVAAPTAGLHFSQQLMQQIKDKGIDIAYITLHVGSGTFKPVQVDNVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + A + + K+ GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPADVCEKIRQTKANGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF + + Y HAI+ YRF+SYGD ++
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKHKIMQAYHHAIAQKYRFFSYGDAMFIY 338
>gi|221064800|ref|ZP_03540905.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni KF-1]
gi|220709823|gb|EED65191.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni KF-1]
Length = 362
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 149/367 (40%), Positives = 203/367 (55%), Gaps = 23/367 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP S IA P R ++RL+ L +D + +LP L D +VFN
Sbjct: 10 LSDFDFDLPESLIAQHPTAVRSASRLL-----DGRSLPATDRIFRELPDLLQPGDLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + +I + + N + R SK G +H
Sbjct: 65 DTKVIKARVFGEKAS-----GGKIELLVERVLQNNEVVAHMRVSKKPLPGAKIHLCGGLR 119
Query: 123 QSRLEATVIDKWNTGEILLVFS----ISGIELERQISLVGTIPLPPYIAR-----KRPID 173
EAT++ +W L G + G +PLPPYI R P +
Sbjct: 120 NGGFEATLLGRWPDENGPLFHLSFKGNQGESPYELLEQFGHLPLPPYIERQQNAEHDPDE 179
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PVK E
Sbjct: 180 KEDSERYQTVFAAHPGAVAAPTAALHFDETVLAALQAKGVERASVTLHVGAGTFQPVKTE 239
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ DH MHSE I PT A+ + RGGRI++VGTT++R LE+ I +G T
Sbjct: 240 NLADHTMHSEWYDIPLPTLAAMERCRQRGGRIIAVGTTTVRTLESWAKYGNI----TGDT 295
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG++++ VD+L++NFHLPKSTL+MLVSAF G E MYQHAI+ YRF+SYGD+
Sbjct: 296 SIFITPGFQYQVVDMLITNFHLPKSTLMMLVSAFAGYEHIMAMYQHAIAQHYRFFSYGDS 355
Query: 354 SLLFQKR 360
LL ++R
Sbjct: 356 MLLERQR 362
>gi|167551789|ref|ZP_02345542.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205323457|gb|EDZ11296.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
Length = 354
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|91207391|sp|Q6LU70|QUEA_PHOPR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 351
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 143/363 (39%), Positives = 199/363 (54%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I D+ S D V
Sbjct: 1 MQVSDFHFDLPNELIARYPQPERTASRLLQL---TGETGNIQHKGFKDVLDLAESGDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARIFGRKAS-----GGKIEVLVERILDDKSILAHVRASKSPKPGNELLLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +A +I + + + S + + VG +PLPPYI RP + D Y
Sbjct: 113 D---DYQAEMIAR--HDTLFEIRFNSDKTVLEILEEVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V++ DDH M
Sbjct: 166 QTVYNAKPGAVAAPTAGLHFDDKLMAALKAKGVNFAFVTLHVGAGTFQPVRVDNIDDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
HSE + A+N+ K+ GGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HSEYVEVPQDVVDAVNATKANGGRIIAVGTTSVRSLESAAQDAVKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEFQLVDVLVTNFHLPESTLIMLVSAFAGYEHTMNAYLQAVDNKYRFFSYGDSMFI 345
Query: 357 FQK 359
++
Sbjct: 346 TRR 348
>gi|86140645|ref|ZP_01059204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leeuwenhoekiella blandensis MED217]
gi|85832587|gb|EAQ51036.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leeuwenhoekiella blandensis MED217]
Length = 351
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 196/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD ARLMV++ I L DL + ND +V
Sbjct: 3 MKLSHFNFDLPKELLAEYPAENRDEARLMVLNRKTQT---IEHKLFKDLIDYFEPNDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L + W V P++ I+ G+ L+F
Sbjct: 60 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E +++ +G PLP YI R ++ D
Sbjct: 116 DDES---LVAEVIDNTTSRGRTLRFLYDGSYQEFRNKLTELGETPLPKYIK--RDVEPED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF PV+VED
Sbjct: 171 AERYQTIFAKNEGAVAAPTAGLHFSKHLLKRLEIKGLNFAEVTLHVGLGTFSPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +ID +N ++ +VGTT +R LE++ + + +N +SG+TN F
Sbjct: 231 KHKMDSEEAYIDRTATSTINKAIGENRKVCAVGTTVMRALESSVSSNRTLNEFSGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTL+M+VSAF G + K+ Y+ A+ Y+FYSYGD L+
Sbjct: 291 IFPPYDFSIANCMITNFHTPKSTLMMMVSAFAGHDFMKEAYEQAVKEKYKFYSYGDAMLI 350
Query: 357 F 357
Sbjct: 351 I 351
>gi|320161390|ref|YP_004174614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Anaerolinea
thermophila UNI-1]
gi|319995243|dbj|BAJ64014.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Anaerolinea
thermophila UNI-1]
Length = 339
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 198/360 (55%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LPP IA PV PR ++RLMV++ I + ++ +L+ D +V
Sbjct: 1 MKTSDFDYFLPPECIAQHPVEPRHNSRLMVLNR---ANDSIQHTIFWNITEYLHPGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A++ + ++ L RV ++W K +KG
Sbjct: 58 VNQTRVIPARIYAHKE-----TGGKLEILLLRRVDDHTWEALI-GGKRPRKGKSFMI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L T+I++ L+ F+ +E + +G +PLPPYI Y
Sbjct: 109 --NEHLHGTIIEELEESRRLVRFNQP---VEPYLERIGQMPLPPYIHEPLRD----PERY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFTS L+ R+ +GI+ VTLHVG TFMPV E+ +H +
Sbjct: 160 QTIFARQPGSAAAPTAGLHFTSELIERIAQMGIQFAEVTLHVGLDTFMPVHEENPLEHKI 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGIINPWSGFTNIFI 297
H+E + TAQ +N+ K GGRI++VGTTS+R LETA E + SG T+++I
Sbjct: 220 HTEWCELTEETAQKINAAKKEGGRIIAVGTTSVRTLETAAQYAREGEWVGAVSGATSLYI 279
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FRAVD +++NFHLP+STL+MLVSAF G E Y+ AI YRFYS+GD L+
Sbjct: 280 LPGYTFRAVDAMITNFHLPRSTLIMLVSAFAGRERILNAYKVAIEQGYRFYSFGDAMLIL 339
>gi|149908740|ref|ZP_01897401.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moritella
sp. PE36]
gi|149808282|gb|EDM68221.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moritella
sp. PE36]
Length = 349
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 136/363 (37%), Positives = 199/363 (54%), Gaps = 21/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+F LP IA P R S+RL+ ++ N + D +D+ + + D +V
Sbjct: 1 MQVSDFNFSLPDELIARYPKADRRSSRLLQLNGNSG---ELVDKQFADILDLVEAGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S +S + R SK K G L
Sbjct: 58 FNNTRVIPARMYGQKAS-----GGKIEVLVERVISDHSVLAHVRSSKSPKVGAQLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++A +I + + L + + +G +PLPPYI RP + D Y
Sbjct: 110 --EGTVKAEMIARHDALFELKFLDERH--VLEILEDIGHMPLPPYI--DRPDEDSDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL L + FVTLHVGAGTF PV+V++ DH M
Sbjct: 164 QTVYNEKPGAVAAPTAGLHFDEALLVELAEKDVNTAFVTLHVGAGTFQPVRVDNILDHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
HSE + + K+ GGR+++VGTTS+R LE+A + + P+ T IF
Sbjct: 224 HSEYAEVSEEVVAKIAETKANGGRVIAVGTTSVRSLESAAQATMAKGLPLAPFFEDTEIF 283
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHLP+STL+ML+SAF G + YQHAI+ YRF+SYGD +
Sbjct: 284 IYPGYKFQLVDAMITNFHLPESTLIMLLSAFAGYDHVMPAYQHAIAEKYRFFSYGDAMFV 343
Query: 357 FQK 359
++
Sbjct: 344 TKQ 346
>gi|253687413|ref|YP_003016603.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259551463|sp|C6DB25|QUEA_PECCP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|251753991|gb|ACT12067.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 355
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 200/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQAERSGCRLLSLDGPTGD---LTHGVFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKVS-----GGKLEVLVERVLDDHRVLAHVRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A D + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ESVKATMAARHDALFE-----LHFDDSRDVLSILNDIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A +++ I P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQNAPIEPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 286 PGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYRQAVAEQYRFFSYGDAMFIT 344
>gi|168818989|ref|ZP_02830989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205343962|gb|EDZ30726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|320084679|emb|CBY94470.1| synthesis of queuine in tRNA [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 354
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 197/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ESIHATMAAR-----HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|144900483|emb|CAM77347.1| Queuosine biosynthesis protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 345
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 178/359 (49%), Positives = 235/359 (65%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IA RPV PRD+ARL+ V ++D +V DLP +L D ++
Sbjct: 1 MDVNLFDFDLPRTLIAERPVSPRDAARLLHV-----QAGGLTDGVVGDLPRWLRPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + E I TLH R S + W +ARP+K ++ GD + F
Sbjct: 56 SNDTRVIPARLFGRK------GEGGIELTLHERTSLDEWKAFARPAKKLRPGDEVRFADD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV K GE+L+ F G +L + G +PLPPYI + D RD DY
Sbjct: 110 -----FSATVAAKGEAGEVLMRFDRGGDDLMLALDAYGRLPLPPYIRKGE-ADERDRADY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT LL+ L S G+ +TLHVGAGTF+PVKV+DT DH M
Sbjct: 164 QTVFAREKGAVAAPTAGLHFTDALLTALESAGVTRTTITLHVGAGTFLPVKVDDTKDHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A A +N K+ GGR+V+VGTTSLRLLE+A +DG+++P+ G T+IFITPG
Sbjct: 224 HAERGVVTAEVADLVNRTKAAGGRVVAVGTTSLRLLESAADDDGVLHPFDGPTDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR VD+LM+NFHLPKSTL MLVSAF G++ + Y +A++ YRFYSYGD LL ++
Sbjct: 284 YRFRLVDVLMTNFHLPKSTLFMLVSAFAGLDRMHQAYAYAMNRGYRFYSYGDACLLERE 342
>gi|146298270|ref|YP_001192861.1| queuosine biosynthesis protein [Flavobacterium johnsoniae UW101]
gi|189038522|sp|A5FMM5|QUEA_FLAJO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146152688|gb|ABQ03542.1| Queuosine biosynthesis protein [Flavobacterium johnsoniae UW101]
Length = 349
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 196/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD +RLMV+ I + D+ + + D ++
Sbjct: 1 MKLSHFNFNLPKELLAEFPAENRDESRLMVIDRQK---NTIEHKMFKDVINYFDDGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNSEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E +++ +G P+P YI R + D
Sbjct: 114 DDDS---LVAEVIDNTTSRGRTLRFLYDGSYEEFRNKLTELGETPIPKYIN--RDVTPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL +L G+ VTLHVG GTF PV+VED
Sbjct: 169 AERYQTIYAKEEGAVAAPTAGLHFSKHLLKKLEIKGVNFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +N K++ RI +VGTTS+R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEELIITQEACDIVNEGKAKKKRICAVGTTSMRAIESSVSSANTLNPYEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P + F + +++NFH PKSTLLM++SAFCG + KK Y+ AI Y+FYSYGD L+
Sbjct: 289 IFPPHDFSIANCMITNFHTPKSTLLMMISAFCGHDLMKKAYEEAIKEGYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|56414441|ref|YP_151516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197363362|ref|YP_002142999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|81599427|sp|Q5PFT5|QUEA_SALPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238689947|sp|B5BDC9|QUEA_SALPK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56128698|gb|AAV78204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197094839|emb|CAR60372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
Length = 354
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|320322942|gb|EFW79032.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. glycinea str. B076]
gi|320329935|gb|EFW85923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 354
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 198/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLVERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVQDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + +SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKSFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|71734363|ref|YP_273557.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|91207393|sp|Q48M15|QUEA_PSE14 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71554916|gb|AAZ34127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 354
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 199/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARH--------HALFELRFAEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + +SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKSFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAGAIEHGYRFFSYGDAMFITR 338
>gi|21231816|ref|NP_637733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66768058|ref|YP_242820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris str. 8004]
gi|24212184|sp|Q8P867|QUEA_XANCP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81305965|sp|Q4UVX3|QUEA_XANC8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21113530|gb|AAM41657.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66573390|gb|AAY48800.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Xanthomonas campestris pv. campestris str. 8004]
Length = 356
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 142/364 (39%), Positives = 200/364 (54%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P P SD V DLP L D ++
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERAASRLLVVPP---TPAAFSDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G ++ +
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQIGASKSPKAGSVIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE + G +PLPPYI R+ +D Y
Sbjct: 113 GQAEVL-------GRDGEFYLLRFDIPAPLEHWLLDAGRLPLPPYIRREPGLDD--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDALDKHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-----DGIINPWSGFTNI 295
H+E + A + + ++RGGR+++VGTT +R LE+A + G + ++G T I
Sbjct: 224 HTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDDAPHGELQSFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STLLM+VSAF G + Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGCDRIFAAYAHAIAQRYRFFSYGDAML 343
Query: 356 LFQK 359
L+ +
Sbjct: 344 LWSR 347
>gi|82703545|ref|YP_413111.1| S-adenosylmethionine [Nitrosospira multiformis ATCC 25196]
gi|91207386|sp|Q2Y6A2|QUEA_NITMU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|82411610|gb|ABB75719.1| S-adenosylmethionine [Nitrosospira multiformis ATCC 25196]
Length = 356
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 150/369 (40%), Positives = 212/369 (57%), Gaps = 28/369 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDFDLPP IA P R ++R++ + + D + +DLP++L D IV
Sbjct: 1 MKIQDFDFDLPPELIAQFPAEKRGNSRMLHLDATSGA---LQDRMFADLPSYLRPGDVIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GVR + + + + R S K G L
Sbjct: 58 FNDTRVIKARLYGVRD-----TGGRVEVLVERVLDSHCALAAIRASHSPKPGSKLFL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+E TV+ + + IL SG + + G +PLPPYI RP++ D + Y
Sbjct: 110 --AGAIEVTVLSREHGFYILQFEHESG--VMELLERYGNLPLPPYI--SRPVEKSDELRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF ++L L +G+ + VTLHVG+GTF PV+VE+ DH M
Sbjct: 164 QTVYAARPGAVAAPTAGLHFDEHMLGLLRKMGVVMAHVTLHVGSGTFQPVRVENIADHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-----------TEDGIINPW 289
HSE+ ++ A T + + K+ GGR+++VGTTSLR LE A + I
Sbjct: 224 HSEVFYVSAETVECIRHAKAEGGRVLAVGTTSLRALEAAAAFAGERAEADNGDGVRIKCG 283
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
+G T+IFITPGY+FR VD L++NFHLP+STLLMLVSAF G+E + Y+HAI YRF+S
Sbjct: 284 AGETDIFITPGYQFRVVDCLLTNFHLPRSTLLMLVSAFGGVENIRCAYRHAIKERYRFFS 343
Query: 350 YGDTSLLFQ 358
+GD L+ +
Sbjct: 344 FGDAMLIGR 352
>gi|260752680|ref|YP_003225573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552043|gb|ACV74989.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
Length = 342
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 176/359 (49%), Positives = 229/359 (63%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQGMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEGKK------NQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDFGQD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 110 -----VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KV+D+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVDDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA +N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANVINETKKQGGRVIATGTTSLRLIESAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|289208484|ref|YP_003460550.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thioalkalivibrio sp. K90mix]
gi|288944115|gb|ADC71814.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thioalkalivibrio sp. K90mix]
Length = 355
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 197/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA P+ R S+RL+V+ + D + + L D +V
Sbjct: 1 MRVSDFDYELPQELIAQYPLPERGSSRLLVLEDKQA-----EDATFGAIESLLRPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A++ G + ++ + SP R S+ K G LH
Sbjct: 56 LNDTRVIPARVFGQKAS-----GGQVEVLVERIESPTQVLAMVRASRAPKPGTRLHLAD- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
V D+ G + + G ++ + G IPLPPYI R + D Y
Sbjct: 110 ----AFTVEVTDR--QGPFFRLRLVDGADMLALLKQHGHIPLPPYIE--RADEGSDAERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHF LL RL + G++ VTLHVGAGTF PVKV+DT H M
Sbjct: 162 QTVFARKEGAVAAPTAGLHFDDALLGRLRAQGVETATVTLHVGAGTFQPVKVDDTSRHEM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + K RGGR+V+VGTT +R LETA E G + P+ G T +FI PG
Sbjct: 222 HAEWLEVGPEACAAVAACKVRGGRVVAVGTTCVRSLETAAAE-GELTPFQGETRLFIQPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR VD +++NFHLP+STLLMLV+AF G Y HA+++ YRF+SYGD L
Sbjct: 281 YRFRVVDRMVTNFHLPQSTLLMLVAAFAGYRRILDAYAHAVANRYRFFSYGDAMWLAP 338
>gi|197248441|ref|YP_002145387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|226713847|sp|B5EWT8|QUEA_SALA4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197212144|gb|ACH49541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
Length = 354
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 198/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKRDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|90021052|ref|YP_526879.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Saccharophagus degradans 2-40]
gi|122996339|sp|Q21KW2|QUEA_SACD2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|89950652|gb|ABD80667.1| S-adenosylmethionine [Saccharophagus degradans 2-40]
Length = 350
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 202/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA RP R +RL+++ ++ DL + D +V
Sbjct: 1 MRRQDFSYELPDELIARRPTETRTGSRLLMLDGPSG---ELAHKQFPDLLNLVEEGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + +S + R SK K G I+
Sbjct: 58 FNNTRVIPARVFGQKAS-----GGKLEILAERILDAHSILAHVRSSKAPKPGSIIIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
Q E ++ + + L F L+ +G +PLPPYI R +A D Y
Sbjct: 110 --QDGTEVEMVAR-HEALFELRFPADTTALDVL-ENIGHMPLPPYI--DREDEADDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y +G+VAAPTAGLHF LL++L G++ FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYGTQKGAVAAPTAGLHFDDVLLAKLKDKGVQQAFVTLHVGAGTFQPVRVDNIFEHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + + + K+ G R+++VGTTS+R LETA ++G++ P+ G T+IFI PG
Sbjct: 224 HSEVMHVSQEVCDLIKATKAAGKRVIAVGTTSVRCLETAA-QNGVVEPYQGDTDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD L++NFHLP+STLLMLVSAF G + T YQ A++ YRF+SYGD +
Sbjct: 283 YQYKVVDALVTNFHLPESTLLMLVSAFAGYKHTMNAYQQAVAQCYRFFSYGDAMFIT 339
>gi|294624102|ref|ZP_06702847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292601602|gb|EFF45594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
Length = 464
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 141/364 (38%), Positives = 205/364 (56%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL+VV P+ P ++D V DLP L D ++
Sbjct: 109 LKKSDFHYDLPDELIAQAPLAERAASRLLVVPPS---PQALADRQVRDLPELLQPGDLLI 165
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 166 FNDTRVIPARLFGHKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIALDAG 220
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE + G +PLPPYI R+ ++ Y
Sbjct: 221 GQAEVL-------GRDGEFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVED--RERY 271
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 272 QTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 331
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H+E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 332 HTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTEAAPEGELQPFAGETQI 391
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E Y+HAI+ YRF+SYGD L
Sbjct: 392 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFAAYRHAIAQRYRFFSYGDAML 451
Query: 356 LFQK 359
L+ +
Sbjct: 452 LWGR 455
>gi|168261167|ref|ZP_02683140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|200390136|ref|ZP_03216747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|199602581|gb|EDZ01127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205350104|gb|EDZ36735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
Length = 354
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 200/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKVRGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|253995831|ref|YP_003047895.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera mobilis JLW8]
gi|253982510|gb|ACT47368.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera mobilis JLW8]
Length = 347
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 137/358 (38%), Positives = 201/358 (56%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LP S IA P R ++R++ ++ S ++D D P F + D ++
Sbjct: 4 MKTQDFDFYLPSSLIAQHPSSERTASRMLYLN---STASKLTDKQFLDFPDFFKAGDLLI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + ++ N+ + R S+ K G + S
Sbjct: 61 FNDTRVIKARLFGNK-----HSGGNVEVLIERVINQNTAYAHVRASRSPKVGSRITL-SD 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A D + +S + + G +PLPPYI D Y
Sbjct: 115 AFDVEVTARHDDL------FELRFLSEDSVFELLEQHGALPLPPYITHG--ATDHDEERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK G+VAAPTAGLHF + +L +L + G+ + +VTLHVGAGTF PV+V+ DH M
Sbjct: 167 QTVYAKHLGAVAAPTAGLHFNTEILEQLKAKGVNIAYVTLHVGAGTFQPVRVDSVADHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + T + + K+ GG + ++GTT++R LE+A +G + G T+IFITPG
Sbjct: 227 HSELFHVPTETVALIEATKANGGIVTAIGTTAMRALESAAR-NGTLAAGEGDTDIFITPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF VD L++NFHLPKSTLLMLVSAF G + +K Y HA++ YRF+SYGD L+ +
Sbjct: 286 YRFNVVDRLLTNFHLPKSTLLMLVSAFAGTDNIRKAYAHAVAGEYRFFSYGDAMLIEK 343
>gi|87200264|ref|YP_497521.1| queuosine biosynthesis protein [Novosphingobium aromaticivorans DSM
12444]
gi|123488975|sp|Q2G636|QUEA_NOVAD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|87135945|gb|ABD26687.1| Queuosine biosynthesis protein [Novosphingobium aromaticivorans DSM
12444]
Length = 342
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 177/358 (49%), Positives = 227/358 (63%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PRDSARL+ + D +V DLP LN D +V
Sbjct: 1 MRVDLFDFELPSENIALRPARPRDSARLL----GVGRDGPFRDLIVRDLPDLLNPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E + TLH R+ W + R +K +++GD++ F +
Sbjct: 57 FNDTRVIPAQLEGQR------GEARVGATLHKRIDLRRWQAFVRNAKRLREGDVIQFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ AT + G L F +E + G +PLPPYIA KRP D +D DY
Sbjct: 111 -----VTATAEMRLPDGSWTLFFP-GEEPVEVLLERAGRMPLPPYIAGKRPTDEQDREDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT +L+ L + G+ +TLHVGAGTF+PVK +DT DH M
Sbjct: 165 QTMFAAKDGAVAAPTAALHFTPSLMEALAARGVATETLTLHVGAGTFLPVKADDTQDHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA TA LN+ ++ G R+++VGTTSLRLLE+AT ED +I P+ G T+IFITPG
Sbjct: 225 HAEWGTIDAATADRLNAARAAGKRVIAVGTTSLRLLESATGEDRVIRPFEGDTSIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FRA+D LM+NFHLPKSTL MLVSA G++ + Y HAI+ YRFYSYGD+SLL
Sbjct: 285 YTFRAIDGLMTNFHLPKSTLFMLVSALMGLDRMQAAYAHAIAGGYRFYSYGDSSLLLP 342
>gi|205351716|ref|YP_002225517.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|226713850|sp|B5R6Q6|QUEA_SALG2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|205271497|emb|CAR36315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|326626749|gb|EGE33092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 354
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPLFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|103487672|ref|YP_617233.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingopyxis alaskensis RB2256]
gi|122984871|sp|Q1GR22|QUEA_SPHAL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|98977749|gb|ABF53900.1| Queuosine biosynthesis protein [Sphingopyxis alaskensis RB2256]
Length = 351
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 182/360 (50%), Positives = 237/360 (65%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRD+AR++VV I D V DLP +L D +V
Sbjct: 1 MRVDAFDFDLPSERIALRPARPRDAARMLVVD-----AGNIVDAGVRDLPQWLRPGDCLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G+R E +I TLH R+ W + R +K ++ G+ + F S
Sbjct: 56 FNDTRVIPAQLEGLR------GEAKIGATLHKRIDLRRWQAFVRNAKRLRVGETVDFGSG 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ G +L F+ +E + GT+PLPPYIA KR D D DY
Sbjct: 110 -----VAALAEERLADGSFVLAFA-GDEPVELLLERAGTMPLPPYIAGKRGADEADRDDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFT LL+ L + GI +TLHVGAGTF+PVK +DTDDH+M
Sbjct: 164 QTMFAREDGAVAAPTAALHFTPELLAALAAAGIATETLTLHVGAGTFLPVKADDTDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I+A TA LN+V++ GGR+++VGTTSLRLLE+A +DG I P++G T+IFITPG
Sbjct: 224 HAEWGRIEADTAARLNAVRASGGRVIAVGTTSLRLLESAARDDGTITPFAGDTSIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+A+D LM+NFHLP+STL MLVSA G+E + Y HAI+ YRFYSYGD SLL ++
Sbjct: 284 YRFKAIDGLMTNFHLPRSTLFMLVSALMGLETMQAAYAHAIAREYRFYSYGDASLLLPRQ 343
>gi|297539464|ref|YP_003675233.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera sp. 301]
gi|297258811|gb|ADI30656.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera sp. 301]
Length = 350
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 136/364 (37%), Positives = 209/364 (57%), Gaps = 24/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+F LP + IA P R ++R++ ++ + ++D++ +LP L + D +V
Sbjct: 1 MRTEDFNFYLPDALIAQHPTAERTASRMLHLNSSKG---ELADNMFINLPEHLQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GV+ + + ++ ++ R S+ K G L +
Sbjct: 58 FNDTRVIKARLFGVK-----HTGGSVEVMIERVINQHTAYAQIRASRAPKVGTRLTLSN- 111
Query: 121 DGQSRLEATVIDKWNTGEILL-VFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
A ++ + L + +S + + G +PLPPYI D
Sbjct: 112 -------AFDVEVTARHDDLFELLFLSETSVLDLLEQHGALPLPPYITHSATSDD--EER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT ++K G+VAAPTAGLHF +L L GI + +VTLHVGAGTF PV+V++ ++H
Sbjct: 163 YQTVFSKHLGAVAAPTAGLHFNDAMLDTLKQKGINIAYVTLHVGAGTFQPVRVDNINEHK 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-----EDGIINPWSGFTN 294
MHSE+ I T +N+ K+ G ++ ++GTT+LR LE+A +G + +G T+
Sbjct: 223 MHSELYSISQATIDMINATKTNGAKVTAIGTTALRALESAARVTEFNTNGNLQAGNGDTD 282
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGY+F+ VD L +NFHLPKSTLLMLVSAF G++ KK Y+HAI+ YRF+SYGD
Sbjct: 283 IFITPGYQFKVVDRLFTNFHLPKSTLLMLVSAFAGMDNIKKAYEHAINEHYRFFSYGDAM 342
Query: 355 LLFQ 358
L+ +
Sbjct: 343 LIEK 346
>gi|262042426|ref|ZP_06015586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|259040201|gb|EEW41312.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
Length = 354
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +D+ LN D +V
Sbjct: 1 MRVTDFAFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDILDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IKATMLAR--HGALFEVEFNDERPVLEILNGIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ ++H M
Sbjct: 166 QTVYGTRPGAVAAPTAGLHFDEPLLDKLRAKGVEMAFVTLHVGAGTFQPVRVDSIEEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D+L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYQVIDVLVTNFHLPESTLIMLVSAFAGYQHTMNAYKVAVEQKYRFFSYGDAMFIT 344
>gi|299532847|ref|ZP_07046234.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni S44]
gi|298719071|gb|EFI60041.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni S44]
Length = 362
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 150/367 (40%), Positives = 203/367 (55%), Gaps = 23/367 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP S IA P R ++RL+ L +D + +LP L D +VFN
Sbjct: 10 LSDFDFDLPESLIAQHPTAVRSASRLL-----DGRSLPATDRIFRELPDLLQPGDLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + +I + + N + R SK G +H
Sbjct: 65 DTKVIKARVFGEKAS-----GGKIELLVERVLQNNEIVAHMRVSKKPLPGAKIHLCGGLK 119
Query: 123 QSRLEATVIDKWNTGEILLVFS----ISGIELERQISLVGTIPLPPYIAR-----KRPID 173
EAT++ +W L G + G +PLPPYI R P +
Sbjct: 120 NGGFEATLLGRWPDENGPLFHLSFKGNQGESPYELLEQFGHLPLPPYIERQQNAEHDPDE 179
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PVK E
Sbjct: 180 KEDSERYQTVFAAHPGAVAAPTAALHFDETVLAALQAKGVERASVTLHVGAGTFQPVKTE 239
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ DH MHSE I PT A+ + RGGRI++VGTT++R LE+ I SG T
Sbjct: 240 NLADHTMHSEWYDIPLPTLAAMERCRQRGGRIIAVGTTTVRTLESWAKYGNI----SGDT 295
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG++++ VD+L++NFHLPKSTL+MLVSAF G E MYQHAI+ YRF+SYGD+
Sbjct: 296 SIFITPGFQYQVVDMLITNFHLPKSTLMMLVSAFAGYEHIMGMYQHAIAQHYRFFSYGDS 355
Query: 354 SLLFQKR 360
LL ++R
Sbjct: 356 MLLERRR 362
>gi|324016689|gb|EGB85908.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 117-3]
Length = 356
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 198/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++ GTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAGGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|224582241|ref|YP_002636039.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|254764286|sp|C0Q7S8|QUEA_SALPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|224466768|gb|ACN44598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
Length = 354
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPDSLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|168237515|ref|ZP_02662573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|194733996|ref|YP_002113436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|238689775|sp|B4TZH8|QUEA_SALSV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194709498|gb|ACF88719.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197289460|gb|EDY28823.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
Length = 354
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|312962926|ref|ZP_07777413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens WH6]
gi|311282953|gb|EFQ61547.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens WH6]
Length = 349
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+ + + +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRASRLLTLDGVSGA---LVHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDTHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELKFAEEVLPLLERVGHMPLPPYI--DRPDEDSDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL + + G++ +VTLHVGAGTF PV+V++ +DH M
Sbjct: 162 QTVYSQRLGAVAAPTAGLHFDQPLLDAIAAKGVETAYVTLHVGAGTFQPVRVDNIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + K+RGGR+V+VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVQACKARGGRVVAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIFPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET YQ AI + YRF+SYGD + +
Sbjct: 281 RPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYQAAIDNGYRFFSYGDAMFITR 338
>gi|312884249|ref|ZP_07743958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309368022|gb|EFP95565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 351
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 140/363 (38%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ A + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLQLDGNSGD---LKDGTFVDVLAQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERVLDEKSILAHVRCSKSPKPGSTIFVGEH 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EFSAQMVAR--HDALFELKFNSDQNVLSVLEQIGHMPLPPYI--DRPDEDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L +L G+++ +VTLHVGAGTF PVKV++ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDELMLEKLAQKGVELAYVTLHVGAGTFQPVKVDNIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A A+ + K+RGGRI++VGTTS+R LE+A T + P+ G T IF
Sbjct: 226 HAEYVEVPASVIDAIKATKARGGRIIAVGTTSVRSLESAAQHALTNGTELAPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYHHAVKNNYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|237800018|ref|ZP_04588479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331022873|gb|EGI02930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 354
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L S D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRSGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKTS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEVEMVARHDA--------LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGSDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLDAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFITR 338
>gi|190573977|ref|YP_001971822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas maltophilia K279a]
gi|190011899|emb|CAQ45520.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas maltophilia K279a]
Length = 355
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 200/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL++V P P +D V DLP+ L D +V
Sbjct: 13 LKKSDFHYDLPAELIAQAPLAERSASRLLLVPP---APDAFTDLQVRDLPSLLQPGDLLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G + +
Sbjct: 70 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQVGASKSPKAGSRIALDAG 124
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE ++ LE+ + G +PLPPYI R+ +D Y
Sbjct: 125 GEAEVL-------GRDGEFYVLQFHVPESLEQWLLHAGRLPLPPYIQREPGVDD--RERY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+ L G++ VTLHVGAGTF PV+ +D DH+M
Sbjct: 176 QTVFAREVGAVAAPTAGLHFDEPLLAALKDKGVEFGHVTLHVGAGTFQPVRADDLKDHVM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITPG
Sbjct: 236 HREWLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESAMR-DGELLPFAGETQIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YR R+VD +++NFHLP+STLLM++SAF G E + Y+HAI YRF+SYGD LLF +
Sbjct: 295 YRIRSVDAMVTNFHLPESTLLMMISAFAGKERVFEAYRHAIEQRYRFFSYGDAMLLFPQ 353
>gi|284006391|emb|CBA71627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Arsenophonus nasoniae]
Length = 352
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 198/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP IA P+ R RL+ + + ++ + +D+ L S D +V
Sbjct: 1 MRVSDFAFKLPDELIAHYPLAKRSHCRLLSLDGSTG---ELAHGIFTDIVDKLESGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + P+ + R SK K G L
Sbjct: 58 FNNTQVIPARLYGRKIS-----GGKIEVLIERMLDPHRVLAHVRASKAPKVGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ I + + ++ ++ +G IPLPPYI RP + D Y
Sbjct: 113 E-----SVKAIMLARHDTLFEIGFQDKRDVLAILNDIGHIPLPPYI--ARPDEEIDRTLY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +LL+ L G+ + FVTLHVGAGTF PV+VE+ +H M
Sbjct: 166 QTVYGQRPGAVAAPTAGLHFDQSLLAALRQKGVAMAFVTLHVGAGTFQPVRVENVAEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A ++ II P+ T IFI
Sbjct: 226 HAEYVEVSQEVVDAILACKARGKRVIAVGTTSIRSLESAACACKEAIIAPFFDDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ F+ VD L++NFHLP+STL+MLVSAF G + T Y+ AI+ YRF+SYGD +
Sbjct: 286 PGFHFQIVDALITNFHLPESTLIMLVSAFAGYQNTMNAYKKAIAEKYRFFSYGDAMFIT 344
>gi|85058623|ref|YP_454325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sodalis
glossinidius str. 'morsitans']
gi|123519936|sp|Q2NVA5|QUEA_SODGM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|84779143|dbj|BAE73920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sodalis
glossinidius str. 'morsitans']
Length = 353
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 194/359 (54%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP + IA P R + RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFALPDNLIARYPQAQRSACRLLSLDGQTGA---LAHQVFTDLLEELAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKVS-----GGKIEVLVERVLDDKRVLAHVRASKAPKPGSALLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + D + ++ ++ G +PLPPYI RP D D Y
Sbjct: 113 DSIAATMVARHDALFE-----LRFDDARDVLTLLNDAGHMPLPPYI--DRPDDVADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + GSVAAPTAGLHF LL+ L + G+++ FVTLHVGAGTF PV+V+ + H M
Sbjct: 166 QTVYGERPGSVAAPTAGLHFDEPLLAALRAKGVEMAFVTLHVGAGTFQPVRVDQIEHHQM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-NPWSGFTNIFITP 299
HSE + A+ + K+RG R+V+VGTT++R LE+A P+ G T+IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTAVRSLESAAAAGEQALTPFFGDTSIFIYT 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY+FR VD+L++NFHLP+STL+MLVSAF G T Y+ A++ AYRF+SYGD + +
Sbjct: 286 GYQFRVVDVLITNFHLPESTLIMLVSAFAGYRHTLAAYREAVAQAYRFFSYGDAMFITR 344
>gi|306821137|ref|ZP_07454753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
gi|304550830|gb|EFM38805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
Length = 344
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +EF +DLP IA P+ R S++L++++ + ++ +L+ ND +V
Sbjct: 1 MKTEEFFYDLPERLIAQTPLKDRSSSKLLLLNKESGNTK---HEIFKNIIDYLDKNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L G++ + L R S W V +P+K +KKG + F
Sbjct: 58 FNNTRVLPARLYGLK----KDTGANVEILLLKRYSMKKWQVLVKPAKRLKKGSTVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L T++++++ G + FS G+ E IS +G +PLPPYI K Y
Sbjct: 111 -GEDLLLMTILEEYDEGIRDVEFSYEGV-FEDIISQIGFMPLPPYIKEKLQD----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT L++ L G+++ ++TLHVG GTF PVK E+ DH+M
Sbjct: 165 QTIYSKINGSSAAPTAGLHFTKELIASLEEKGVQIEYLTLHVGLGTFRPVKAEEVTDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID TAQ LN K G +I++VGTT++R LE+A D I+ T+IFI P
Sbjct: 225 HSEHYVIDEDTAQRLNKAKKEGKKIIAVGTTTVRTLESAVNRDNILEKLEDDTSIFIYPP 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD +++NFHLP+STL+M++SAF G ++ Y+ AI + YRF+S+GD+ +
Sbjct: 285 YDFKFVDSIITNFHLPQSTLIMMISAFAGKDKVFNAYKVAIENEYRFFSFGDSMFI 340
>gi|154253493|ref|YP_001414317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvibaculum lavamentivorans DS-1]
gi|171769669|sp|A7HXM7|QUEA_PARL1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154157443|gb|ABS64660.1| Queuosine biosynthesis protein [Parvibaculum lavamentivorans DS-1]
Length = 350
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 183/357 (51%), Positives = 232/357 (64%), Gaps = 10/357 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IALRP PRDSAR++V+ P ++D VSDLP+ L D +V
Sbjct: 1 MRVSDFDFDLPEELIALRPARPRDSARMLVIGP---AENALADKSVSDLPSHLREGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G R I LH R S + W + RP+K + + + F
Sbjct: 58 FNDTKVIPARLFGTRRRGEAS--ARIEVMLHKRESADEWRAFLRPAKKLNLSETIDFPGG 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K GE L FS+SG L+ I+ G +PLPPYIARKR D D DY
Sbjct: 116 -----LSAAVEEKGEGGEAGLRFSLSGPALDAAIAAAGEMPLPPYIARKRAADDEDVADY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT L++ + + G+ +TLHVGAGTF+PV EDTD H M
Sbjct: 171 QTLHADEPGAVAAPTAGLHFTPALMAAIEARGVSTVRLTLHVGAGTFLPVTAEDTDTHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A A+N +++GGRIV+VGTTSLRLLE+A E G ++P+ G T+IFITPG
Sbjct: 231 HAERGEITEAEAAAINEARAKGGRIVAVGTTSLRLLESAVDEAGTVHPFRGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRFRAVD+LM+NFHLP+STL MLVSA EE K+ Y HA++ YRFYSYGD L++
Sbjct: 291 YRFRAVDVLMTNFHLPRSTLFMLVSALRSTEEMKRAYAHAVAEKYRFYSYGDACLIY 347
>gi|330807626|ref|YP_004352088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327375734|gb|AEA67084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 349
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRASRLLTLDGVSGA---MAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++R+ A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEARMVARHDA--------LFELAFAEEVLPLLDRVGHMPLPPYI--DRPDEGSDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAERLGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVERIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HNEWLEVSQEVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G E Y+ A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPEAMAAYKAAVEHGYRFFSYGDAMFITR 338
>gi|326387409|ref|ZP_08209018.1| queuosine biosynthesis protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326208065|gb|EGD58873.1| queuosine biosynthesis protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 342
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 182/357 (50%), Positives = 219/357 (61%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PRDSARL+ V + D V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPERIALRPARPRDSARLLHVPGK----GALGDLHVRDLPGLLRKGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G+R + I TLH R W + R K + GD + F
Sbjct: 57 FNDTRVIPAQLEGMR------GQARIGATLHKREDLRRWQAFVRNGKRLSPGDTIDFGEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + G L F +E + G +PLPPYIA KRP DA D DY
Sbjct: 111 -----VMALAEVRHPDGSWTLAF-QGDEPVEILLERAGRMPLPPYIASKRPTDAADRQDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT LL L GI +TLHVGAGTF+PVK EDT DH M
Sbjct: 165 QTMFAARDGAVAAPTAALHFTPGLLEALADAGIGHETLTLHVGAGTFLPVKAEDTSDHAM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E G I+ TA LN+V++ GGR+++VGTTSLRLLE+A ED +I P++G T+IFITPG
Sbjct: 225 HPEWGRIEQETADRLNAVRAGGGRVIAVGTTSLRLLESAAGEDRVIRPFAGDTSIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y FRA+D LM+NFHLPKSTL MLVSA G++ ++ Y HAI YRFYSYGD SLL
Sbjct: 285 YTFRAIDGLMTNFHLPKSTLFMLVSALMGLDRMQEAYAHAIREGYRFYSYGDASLLL 341
>gi|73748606|ref|YP_307845.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dehalococcoides sp. CBDB1]
gi|289432632|ref|YP_003462505.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalococcoides sp. GT]
gi|91207422|sp|Q3ZXG6|QUEA_DEHSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|73660322|emb|CAI82929.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Dehalococcoides sp. CBDB1]
gi|288946352|gb|ADC74049.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalococcoides sp. GT]
Length = 343
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 198/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA +PV PRDS+RL+V++ +++ + ++ + D +V
Sbjct: 1 MKTSDFDYNLPQEYIAQKPVEPRDSSRLLVLNRQSG---ELTNRIFGEITDYFKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ +I L R W +P K K G I+ +
Sbjct: 58 MNDSRVLPARIKGIK----QDTSAKIEILLLKRDGEGCWEALLKPGKRTKPGTIIDIHQK 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++A V+ G LL FS + +G +PLPPYI Y
Sbjct: 114 GGVVSIQAEVLADKEDGIKLLRFSDE-----THLMKLGEVPLPPYIHTPVAD----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT LL RL +G+ +VTLH+G TF PVK ED DH +
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTPELLKRLTEMGVICTYVTLHIGLDTFRPVKEEDPKDHKI 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H E G + TA A+ K G R+ VGT++ RL+E A+ ++ +I +SG+ ++FI
Sbjct: 225 HREYGILSKETASAICCAKETGKRVFCVGTSATRLVEQASHLSQTSLITSYSGWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+FR D ++NFHLP+ST LML SAF G +K Y+ AIS YRFYS+GD L+
Sbjct: 285 PGYKFRVADCFITNFHLPRSTPLMLTSAFAGWPFLRKAYEKAISEHYRFYSFGDAMLIL 343
>gi|317047142|ref|YP_004114790.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
At-9b]
gi|316948759|gb|ADU68234.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
At-9b]
Length = 383
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 205/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + +S + +D+ LN D +V
Sbjct: 28 MRVADFSFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LSHGVFTDVLEKLNPGDLLV 84
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 85 FNNTRVIPARVYGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGDD 139
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + +T + + ++ VG +PLPPYI RP + D Y
Sbjct: 140 ES---VKATMVARHDTLFEIAFEDDR--AVLDILNSVGHMPLPPYI--DRPDEEADRELY 192
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL L + G+++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 193 QTVYSARPGAVAAPTAGLHFDDPLLQALKAKGVEMAFVTLHVGAGTFQPVRVESIEDHTM 252
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 253 HSEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAQASKDALIAPFFDDTQIFIY 312
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 313 PGYQYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYQAAVAEQYRFFSYGDAMFITR 372
>gi|297588493|ref|ZP_06947136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 53516]
gi|297573866|gb|EFH92587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 53516]
Length = 345
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 199/357 (55%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++L IA P+ RD ++LMV+ + ++ +LN D +V
Sbjct: 1 MNTDDFDYELDEKFIAQTPLDKRDESKLMVMDRFNGNTEI---KKFYNIIDYLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R +E++I L + W +P K +K ++ F
Sbjct: 58 CNNTRVIPARLFGHRPG----KEEKIEVLLLQQTEDK-WECLVKPGKKMKLDQVIEFSD- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ A V+D G +L F GI E ++ +G +PLPPYI K Y
Sbjct: 112 ----KVSAKVVDITEDGSRILKFDYEGI-FEERLDELGNMPLPPYIKEKLND----KERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT+ LL ++ GI V F+TLHVG GTF PVKV+D DH M
Sbjct: 163 QTVYSKHKGSAAAPTAGLHFTNELLEKIKEKGIYVVFLTLHVGLGTFRPVKVDDVKDHHM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-NPWSGFTNIFITP 299
HSE I T +N KS+G I++VGTTS+R LET T + SG+T+IFI P
Sbjct: 223 HSEYYTISQETVDIINRQKSKGHNIIAVGTTSVRTLETVTHNNNSKLVAESGWTDIFIYP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F VD L++NFHLPKSTL+MLVSAF E Y+ A + +RF+S+GD +
Sbjct: 283 GFEFNIVDSLITNFHLPKSTLMMLVSAFSKKEYIFDAYEKAKRNDFRFFSFGDAMFI 339
>gi|307293389|ref|ZP_07573235.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Sphingobium
chlorophenolicum L-1]
gi|306881455|gb|EFN12671.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Sphingobium
chlorophenolicum L-1]
Length = 342
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 186/358 (51%), Positives = 230/358 (64%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSARL++V + + D +V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPESIALRPASPRDSARLLLVSGD----ALFEDRIVRDLPGLLRPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R E I TLH R+S W + R +K ++ GD + F +
Sbjct: 57 FNDTKVIPAQLEGMR------GEARIGATLHKRLSLRQWQAFLRNAKRVRDGDRIDFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + G + L F +E + G +PLPPYIA KRP D RD DY
Sbjct: 111 -----VTAIAGPRDEDGGVTLSFE-GEEPVEVLLERAGRMPLPPYIASKRPTDERDRSDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFT +L + L G+ +TLHVGAGTF+PVK EDTDDH M
Sbjct: 165 QTMFAREDGAVAAPTAALHFTPDLTAALAKAGVGTETLTLHVGAGTFLPVKAEDTDDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G ID TA LN+ + GGR+++VGTTSLRLLE+AT E G+I+P++ T IFITPG
Sbjct: 225 HAEWGRIDQATADRLNAARQAGGRLIAVGTTSLRLLESATDEHGVIHPFADETRIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRAVD LM+NFHLPKSTL MLVSA G E + Y HAI+ YRFYSYGD+SLL
Sbjct: 285 YRFRAVDGLMTNFHLPKSTLFMLVSALMGRERMQAAYAHAIAQGYRFYSYGDSSLLLP 342
>gi|311748337|ref|ZP_07722122.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
gi|126576845|gb|EAZ81093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
Length = 349
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 195/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F++P ++L P RD +RLMV+H + I + D+ + D V
Sbjct: 1 MKLSDFKFEVPKKLVSLYPAENRDESRLMVLHRDTG---KIEHRVFKDITEYFGEGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + EI L ++P W V P++ I+ G+ L+F
Sbjct: 58 TNDTKVFPARLYGNK----EKTGAEIEVFLLRELNPELRLWDVLVDPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L A VID + I +F + E + I +G PL +R ++ D
Sbjct: 113 ---GDSDLVAEVIDNTTSRGRTIRFLFDGTEEEFHKTIDTLGETPLLKEF-IERKVETED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK G+VAAPTAGLHFT +LL RL G++V +TLHVG GTF V VED
Sbjct: 169 RERYQTVFAKNVGAVAAPTAGLHFTPHLLKRLELQGVEVSPITLHVGLGTFRQVDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I T +N R+V+VGTTSL+ +E++ T +G + G+T+ F
Sbjct: 229 KHKMDSENYNIPEGTVSLVNKALDEKKRVVAVGTTSLKTVESSVTANGRLKASQGWTDKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + L++NFHLP+STLLM SAF G + K Y+ AI YRF+SYGD L+
Sbjct: 289 IIPPYEFKIANALITNFHLPESTLLMTASAFGGYDLVMKAYKEAIKEKYRFFSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|300868110|ref|ZP_07112745.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oscillatoria sp. PCC 6506]
gi|300333884|emb|CBN57925.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oscillatoria sp. PCC 6506]
Length = 369
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 149/370 (40%), Positives = 210/370 (56%), Gaps = 24/370 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++ +++ LPP RIA PV PRDS+RL+VV P + +LP FL D +V
Sbjct: 10 LKLEAYNYVLPPERIAQNPVVPRDSSRLLVVD----SPHSHQHSIFRELPNFLKRGDLLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L N W +P K +K G + F
Sbjct: 66 LNNTRVLPARLKGRK-----PNGYPVEALLMEERERNCWLALVKPGKRLKPGARIEFDPL 120
Query: 121 DGQ----SRLEATVIDKWN-TGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDA 174
+G+ RL ATV+++ TG LL F + G+ L + + G IPLPPYI + +
Sbjct: 121 NGEIPNGDRLSATVLERDEATGGRLLQFEVPVGMSLVQLLPEYGHIPLPPYIKNSQALG- 179
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA+ G++AAPTAGLHFT LL L GI+ FVTLHVG GTF PV+VED
Sbjct: 180 ---EQYQTIYAEKLGAIAAPTAGLHFTDELLKGLQEKGIEQAFVTLHVGVGTFRPVEVED 236
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-----NPW 289
H MH E + A T + ++ GGRI++VGTT++R LE A +
Sbjct: 237 LTTHQMHREWVEVPAITVDKIRQTQANGGRIIAVGTTAVRALEGAAAAAQKQNLPSLQAF 296
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T++FI PGYR++ V+ L++NFHLP+S+LLMLVSA G + ++Y+ AI+H YRFYS
Sbjct: 297 CGHTDLFIYPGYRWQVVEGLITNFHLPQSSLLMLVSAMIGRQRLFELYEEAIAHQYRFYS 356
Query: 350 YGDTSLLFQK 359
+GD L+ +
Sbjct: 357 FGDAMLILPE 366
>gi|109897552|ref|YP_660807.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudoalteromonas atlantica T6c]
gi|123361096|sp|Q15WI5|QUEA_PSEA6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|109699833|gb|ABG39753.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudoalteromonas atlantica T6c]
Length = 346
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 133/364 (36%), Positives = 200/364 (54%), Gaps = 23/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EF FDLP + IA P R ++RLM + +S +D+ +N D ++
Sbjct: 1 MKVSEFQFDLPEALIARYPTKERTASRLMHL-----ATTGLSHLQFTDVVNLINPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 56 FNNTRVIPARLLGQKAS-----GGKVEVLIERIIDEHHVLAHVRASKSPKEGTQLLL--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++E ++ + + L + ++ + + G +PLPPYI RP + D Y
Sbjct: 108 --EGKVEMEMVGRQDALFTLKL--LNPEPILEILEQYGHMPLPPYI--DRPDEESDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L +L G+ FVTLHVGAGTF PV+V++ +H M
Sbjct: 162 QTVYNEKPGAVAAPTAGLHFDDVILKQLRDKGVNTEFVTLHVGAGTFQPVRVDNILEHQM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINP-WSGFTNIF 296
HSE + A+ K+ G R+++VGTTS+R LE+A E+G + T+IF
Sbjct: 222 HSEYAEVPQNVVDAIAKTKTAGKRVIAVGTTSVRSLESAAKAALENGTALASFFSDTDIF 281
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ +D +++NFHL +STL+MLVSAF G E YQ AI+ YRF+SYGD +
Sbjct: 282 IYPGYKFQVIDAMLTNFHLSESTLIMLVSAFAGKENVMNAYQEAIAQQYRFFSYGDAMFI 341
Query: 357 FQKR 360
+ +
Sbjct: 342 EKNQ 345
>gi|291295061|ref|YP_003506459.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Meiothermus
ruber DSM 1279]
gi|290470020|gb|ADD27439.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Meiothermus
ruber DSM 1279]
Length = 338
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 201/358 (56%), Gaps = 21/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LPP IA PRD++RLMV+ I+ + DLP +L + D +V
Sbjct: 1 MNLEDFDYHLPPELIAQSGAEPRDASRLMVIDRQTG---QITHRIFRDLPQYLRAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+ + + E+ + W +P++ K G L F
Sbjct: 58 LNQSKVIPARTFA---TNPHGTGLEVLLVREIPSGEGLWEALLKPARRAKVGSRLTFPDG 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV G LL FS + + +G +PLPPYI + D Y
Sbjct: 115 -----LFATVEAIEADGTRLLRFS---GNVWEHLENIGKMPLPPYIQA-----SVDPARY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT LL R+ +G+ + +VTLHVG GTF PV +D D H+M
Sbjct: 162 QTVYAKTPGSVAAPTAGLHFTPELLDRVRGLGVDIQYVTLHVGPGTFKPVH-DDPDRHVM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITP 299
H E + TA+A+N ++ G R+++VGTT +R LETA + E G + +G T +FI P
Sbjct: 221 HLEPYEVSPQTAEAVNRARAEGRRVIAVGTTVVRTLETAYSAELGGVQAGAGETQLFIRP 280
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+++ +D L++NFHLPKSTLLMLVSAF G K+ YQ A++ YRFYS GD L+
Sbjct: 281 GFKYNVIDTLITNFHLPKSTLLMLVSAFMGHGLMKQAYQTAVAERYRFYSLGDAMLIL 338
>gi|194445819|ref|YP_002039645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|238693537|sp|B4SWP5|QUEA_SALNS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194404482|gb|ACF64704.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
Length = 354
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ K RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLVAKVRGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|260575224|ref|ZP_05843224.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhodobacter
sp. SW2]
gi|259022484|gb|EEW25780.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhodobacter
sp. SW2]
Length = 345
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 164/358 (45%), Positives = 216/358 (60%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL++ + ISD VSDL D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRTAARLLLAEGD-----AISDRQVSDLVDIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R + TL + W A+P + + G+++ F
Sbjct: 56 LNNTRVIPARLTGTRARGNAV--ARVEVTLLEPAADGGWRALAKPLRKLALGEVVRFSD- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV K T L+ F + G + ++ G +PLPPYIA KR DA+D VDY
Sbjct: 113 ----HFSATVAGKSETDLRLV-FDLEGAAFDAALAEAGAMPLPPYIAAKRAPDAQDRVDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF + LL+ L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHSGAVAAPTASLHFDAALLAALAAKGVDFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A +N+ + GGR++ VGTT+LRL+E+A DG++ W+G T+IFI PG
Sbjct: 228 HAEWGEVTTVAAAQINATHAAGGRVIPVGTTALRLIESAAAADGLVRAWAGTTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR D LM+NFHLPKSTLLMLVSA G ++YQHA+ YRF+SYGD SLL
Sbjct: 288 YRFRVADALMTNFHLPKSTLLMLVSALMGQGRITRIYQHAVVQRYRFFSYGDASLLIP 345
>gi|320173777|gb|EFW48960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae CDC 74-1112]
Length = 356
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTYGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|254282955|ref|ZP_04957923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR51-B]
gi|219679158|gb|EED35507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR51-B]
Length = 358
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 199/357 (55%), Gaps = 12/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ ++F FDLP IA P+ R S+RL+V+ + +D+ +N D +V
Sbjct: 1 MLRQDFQFDLPGELIAQEPLAERSSSRLLVLEGASGD---LFHKQFTDIVDLINPEDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L GV+ + + + + S R SK + G ++ S
Sbjct: 58 FNNTKVLPARLFGVK-----QTGGRVEILIERLRADGSAVAQVRASKTPRDGAAIYITSD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + E V G + L+ G + + G +PLPPYI RP + D Y
Sbjct: 113 EESDKSEFYVRVVGREGSMYLLEPEVG-DWREIMRRFGHMPLPPYI--DRPDNESDQDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA +G+VAAPTAGLHF NLL L + G+ VTLHVGAGTF PV+ E +DH M
Sbjct: 170 QTVYASKEGAVAAPTAGLHFDRNLLRDLSAKGVASVEVTLHVGAGTFQPVRAERIEDHHM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + +A+++ + GGR+V+VGTT++R LE A G + P+ G T+IF+ PG
Sbjct: 230 HAETIDVGLTVCEAVDACRDGGGRVVAVGTTAVRSLEAAAA-AGSLVPFHGDTDIFLYPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
FR VD +++NFHLP+STL+MLVSAF G E Y+ A+S YRF+SYGD +
Sbjct: 289 RPFRVVDAMITNFHLPESTLIMLVSAFAGREHVLAAYRAAVSQRYRFFSYGDAMFIT 345
>gi|50120058|ref|YP_049225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium atrosepticum SCRI1043]
gi|81645884|sp|Q6D856|QUEA_ERWCT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|49610584|emb|CAG74029.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium atrosepticum SCRI1043]
Length = 355
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 208/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQAERSGCRLLSLDGPTGD---LTHGVFTDLLEKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKVS-----GGKLEVLVERVLDDHRILAHVRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---VKATMVARHDA--LFELHFDDSRDVLSILNDIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L + GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALRAKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A ++D I P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQDAPIAPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 286 PGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYREAVAEQYRFFSYGDAMFIT 344
>gi|121998492|ref|YP_001003279.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halorhodospira halophila SL1]
gi|121589897|gb|ABM62477.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halorhodospira halophila SL1]
Length = 345
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 200/358 (55%), Gaps = 19/358 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD+ LP IA RP R ++R++V+ + ++D +DLPA+L + D +V
Sbjct: 5 RRSDFDYALPERLIAHRPAAQRAASRMLVLRTDSGA---LADRRFTDLPAYLRAGDLLVL 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS--VYARPSKVIKKGDILHFFS 119
N+T+VI A+L + + + P++ R ++ K G L
Sbjct: 62 NDTRVIPARLEAAK-----PTGARVEVLIERVEDPDAGLITCQLRANRTPKPGGRLGLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
LE L + L + VG +PLPPYI +RP D D
Sbjct: 117 GVQAEVLEREGR------FFRLQLAGLVESLWDYLERVGHVPLPPYI--RRPDDDEDRTR 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF LL RL + G+ VTLHVGAGTF PV+ +D H
Sbjct: 169 YQTVFAARPGAVAAPTAGLHFDDALLERLRADGVGTARVTLHVGAGTFAPVESDDLSAHT 228
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E + A T A+N+ + RGGR+V+VGTT +R LE+A DG + P+SG T +FITP
Sbjct: 229 MHAEWLEVSAETVAAVNATRERGGRVVAVGTTVVRALESAAA-DGQLAPYSGETRLFITP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY FRAVD L++NFHLP+STLLMLVSAF G E Y+HA++ YRF+SYGD LL
Sbjct: 288 GYCFRAVDGLLTNFHLPESTLLMLVSAFGGYESVMAAYRHAVAEEYRFFSYGDAMLLI 345
>gi|251790678|ref|YP_003005399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
zeae Ech1591]
gi|247539299|gb|ACT07920.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
zeae Ech1591]
Length = 357
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 201/360 (55%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + I+ + +DL L D +V
Sbjct: 3 MRVADFSFELPEYLIARYPQAKRSGCRLLSLDGPTGA---IAHGVFTDLLDKLQPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 60 FNNTRVIPARLFGRKAS-----GGKLEVLVERMLDDKRVLAHVRASKAPKPGTALLLGED 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + ++ ++ +G +PLPPYI RP +A D Y
Sbjct: 115 ES---VKATMLARHDALFEIQFDDTR--DVLTILNDIGHMPLPPYI--DRPDEAADRELY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 168 QTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVEMAFVTLHVGAGTFQPVRVESIEDHIM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN--PWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A + P+ G T IFI
Sbjct: 228 HAEYAEVPQAVVDAVLACKARGNRVIAVGTTSVRSLESAAQASAGESLAPFFGDTRIFIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY +R VD L++NFHLP+STL+MLVSAF G T Y+ A++ YRF+SYGD + +
Sbjct: 288 PGYHYRVVDALVTNFHLPESTLIMLVSAFAGYRHTMAAYRQAVTEQYRFFSYGDAMFITR 347
>gi|218778769|ref|YP_002430087.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfatibacillum alkenivorans AK-01]
gi|218760153|gb|ACL02619.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfatibacillum alkenivorans AK-01]
Length = 359
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 137/358 (38%), Positives = 185/358 (51%), Gaps = 14/358 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LP IA P RD++RL+ + N + L D +V N
Sbjct: 11 LASYDYELPEELIAQAPAEKRDASRLLKLDKNTGQTA---HLQFAQAADLLQPGDLMVVN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEI---SCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+TKV +L G + I P + + SK K G L F
Sbjct: 68 DTKVTPVRLFGKKETGGKVEALIIDYRPVAQAGPGEPFACECLVKASKRPKPGSRLFFDK 127
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK-RPIDARDYV 178
L+A I L+ E + + IPLPPYI R D
Sbjct: 128 GLKAKVLKAED-------RICLLEFTCPTEPGAVLDDIAAIPLPPYIRRGGDAPPCNDRE 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQTTYA+ +G+VAAPTAGLHFT LL + + G++ +TLHVG GTFMPV+V+D H
Sbjct: 181 RYQTTYARHKGAVAAPTAGLHFTPELLDFIQAKGVEFVRITLHVGYGTFMPVRVDDVRKH 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I AQA+N K +G R+V+VGTTS+R LE ++ E+G + SG ++FI
Sbjct: 241 KMHSEFYEISPEAAQAINHAKDQGRRVVAVGTTSVRTLEYSSREEGRVAAGSGMCDLFIM 300
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+RF VD L++NFHLP+STLLMLVSA G E YQ A++ YRF+SYGD +
Sbjct: 301 PGFRFNIVDALITNFHLPQSTLLMLVSALAGRENILAAYQEAVAEKYRFFSYGDAMFI 358
>gi|62179016|ref|YP_215433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|75484605|sp|Q57SF9|QUEA_SALCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|62126649|gb|AAX64352.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|322713475|gb|EFZ05046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 354
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 200/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLP YI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPQYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|269103295|ref|ZP_06155992.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163193|gb|EEZ41689.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 351
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 145/363 (39%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R S+RL+ + N I+ D+ +N D ++
Sbjct: 2 MQVSDFDFDLPDELIARYPQPERTSSRLLQLDGNSGD---IAHKTFKDVLDLVNPGDLMI 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 59 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEKSILAHVRASKSPKPGTELLLGEN 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + S + + VG +PLPPYI RP + D Y
Sbjct: 114 D---EYSAEMVAR--HDALFEIRFNSDKTVLEILDEVGHMPLPPYI--DRPDEDADKERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF LL+ L G+ FVTLHVGAGTF PV+V++ DDH M
Sbjct: 167 QTVYNAKPGAVAAPTAGLHFDDALLAALKEKGVNFAFVTLHVGAGTFQPVRVDNIDDHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGII-NPWSGFTNIF 296
HSE + A+N K+ GGR+V+VGTTS+R LE+A ++G P+ G T IF
Sbjct: 227 HSEYVEVPEEVVTAINETKANGGRVVAVGTTSVRSLESAAQDAVKNGTELKPFFGDTEIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD+L++NFHLP+STL+MLVSAF G E T Y+ A+++ +RF+SYGD+ +
Sbjct: 287 IFPGYQFQLVDVLITNFHLPESTLIMLVSAFAGYEHTMNAYKDAVANQFRFFSYGDSMFV 346
Query: 357 FQK 359
+K
Sbjct: 347 TRK 349
>gi|260222591|emb|CBA32304.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 358
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 141/362 (38%), Positives = 205/362 (56%), Gaps = 21/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP + IA P R ++RL+ V D + DLP L + D +VFN
Sbjct: 12 LSDFDFELPEALIAQHPAAERSASRLL-----DGTGEVSVDRIFKDLPGLLRAGDLLVFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + ++ + + N + + R SK + G + G
Sbjct: 67 DTKVINARLFGEK-----TTGGKVELLIERVLGGNQVAAHMRVSKKPEVGATIKMTCAPG 121
Query: 123 -QSRLEATVIDKWN----TGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ L AT++ +W ++ + G + + G +PLPPYI +
Sbjct: 122 HEDGLCATLLGRWPNVDGPIYRFVLSNDRGDDPYTLMERHGHVPLPPYITHSDSPEDVQ- 180
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +AK G+VAAPTA LHF + ++L +IG++ VTLHVGAGTF PVK E+ +
Sbjct: 181 -RYQTVFAKNPGAVAAPTAALHFDEAVFAQLDAIGVQRAHVTLHVGAGTFQPVKTENIAE 239
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE + T +A+ + K+RGGRIV+VGTTS+R LE+ SG TNIFI
Sbjct: 240 HQMHSEWYNVPLETQEAIAACKARGGRIVAVGTTSVRTLESWAKTG----IASGDTNIFI 295
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+ F+ VD+L++NFHLPKS+L+MLVSAF G +Y+ AI+ YRF+SYGD+ LL
Sbjct: 296 TPGFDFKLVDVLVTNFHLPKSSLMMLVSAFTGYGHVMGLYRDAIARGYRFFSYGDSMLLT 355
Query: 358 QK 359
++
Sbjct: 356 RR 357
>gi|146310535|ref|YP_001175609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter sp. 638]
gi|167016406|sp|A4W778|QUEA_ENT38 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145317411|gb|ABP59558.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Enterobacter sp. 638]
Length = 356
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 195/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSGCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + D V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ESINATMVARHDALFE-----VEFNDARPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL RL GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLERLREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKKDLIEPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYTVIDALVTNFHLPESTLIMLVSAFAGYQNTMNAYKAAVEQNYRFFSYGDAMFIT 344
>gi|295135351|ref|YP_003586027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Zunongwangia profunda SM-A87]
gi|294983366|gb|ADF53831.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Zunongwangia profunda SM-A87]
Length = 351
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 136/361 (37%), Positives = 195/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LPP +A P RD ARLMV++ I DL + + D +V
Sbjct: 3 MKLSNFNFELPPELLAEYPAENRDEARLMVLNRKEQT---IEHKQFKDLIDYFDPEDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L + W V P++ I+ G+ L+F
Sbjct: 60 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNAETKLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + R++ +G PLP YI R + +
Sbjct: 116 DDES---LVAEVIDNTTSRGRTLRFLYDGSYEDFRRKLKELGETPLPKYIKRDVQPEDQ- 171
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF PV+VED
Sbjct: 172 -ERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGVNFAEVTLHVGLGTFSPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+ +N K+ ++ +VGTT +R+LE++ + + +N + G+TN F
Sbjct: 231 KHKMDSEEAFVKGDAVHTINKAKTEKRKVCAVGTTVMRVLESSVSSNQTLNEFGGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM++SAF G + + Y+ A+ YRFY+YGD L+
Sbjct: 291 IFPPYDFSIANCMVTNFHTPKSTLLMMISAFAGHDFMMRAYEEAVKEKYRFYTYGDAMLI 350
Query: 357 F 357
Sbjct: 351 L 351
>gi|86606142|ref|YP_474905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-3-3Ab]
gi|86554684|gb|ABC99642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-3-3Ab]
Length = 396
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 141/372 (37%), Positives = 203/372 (54%), Gaps = 20/372 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +D+ LPP RIA PV PRD AR++VV+P+ DLP +L + D +V
Sbjct: 31 LLTASYDYSLPPERIAQAPVEPRDQARMLVVYPDR-----HEHRRFCDLPDYLQAGDLLV 85
Query: 61 FNNTKVITAQLNGVRFC-HINRREKEISCTLHMRV------SPNSWSVYARPSKVIKKGD 113
N+TKVI A+L G + + + L + W V RP K +K GD
Sbjct: 86 LNDTKVIPARLWGAKVLPGKDASGARVEVLLLEPIPANTSKQEQIWRVLVRPGKRVKVGD 145
Query: 114 ILHFFSQDG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+ F+ + G + +D G ++ + E+ + VG IPLPPY+
Sbjct: 146 QIRFWDRQGSPAELGATVLAVDAETGGRVVQLTWEGADTFEQILGRVGRIPLPPYLKAAH 205
Query: 171 PIDAR----DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
+D DYQT +A+ GSVAA TAGLHFT LL RL GI+ ++TL++G GT
Sbjct: 206 ALDPTSAGVRPEDYQTVWARHPGSVAASTAGLHFTPQLLERLAQKGIQTAYITLNIGLGT 265
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F PV+ E DH +HSE + A T + +++G R+++VGTT +R LETA G +
Sbjct: 266 FRPVEAERVTDHRLHSEWLKVPAETVATIRETQAQGRRVIAVGTTVVRALETAAL-CGTL 324
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
PW G +++FI PGY +R V L++NFHLP+S+L+MLV+A G E +YQ AI YR
Sbjct: 325 QPWQGKSDLFIYPGYSWRVVQGLITNFHLPRSSLMMLVAALIGRERLLDLYQEAIREGYR 384
Query: 347 FYSYGDTSLLFQ 358
FYS+GD L+
Sbjct: 385 FYSFGDGMLILP 396
>gi|255261251|ref|ZP_05340593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thalassiobium sp. R2A62]
gi|255103586|gb|EET46260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thalassiobium sp. R2A62]
Length = 348
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 165/361 (45%), Positives = 230/361 (63%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA+RP PR SARL++ + I D +V+DL L D +V
Sbjct: 1 MKLSDFDFDLPDDRIAVRPTQPRSSARLLLARGDD-----ILDRVVTDLIDILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R + + I TL + +W+ +P K + +G+ + F
Sbjct: 56 LNDTRVIPARLSGQRHRNSAQGPVSAAIDVTLLTPQADGAWTALIKPLKKVTEGEDIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT+I K G+ L F+++G + + ++ G +PLPPYIA KR DA+D+
Sbjct: 116 DD-----LSATLIGKE-DGQGRLKFNLTGDDFDAALAAAGAMPLPPYIAAKRAADAQDHT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ QG+VAAPTA LHF LL L + GI+ +VTLHVGAGTF+PVKV++ DH
Sbjct: 170 DYQTVWARHQGAVAAPTASLHFDQPLLEALNAKGIQFTYVTLHVGAGTFLPVKVDNIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G I A A+NS R++ VGTT+LRL+E+A ++G + W G T+IFIT
Sbjct: 230 KMHSEWGQITHAAADAINSTTG---RVIPVGTTALRLIESAA-QNGRLAAWEGPTDIFIT 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ D LM+NFHLPKSTL+MLVSA G + K +Y HA+ H YRF+SYGD+SLL
Sbjct: 286 PGFKFQIADGLMTNFHLPKSTLMMLVSALMGTQNIKDIYAHALRHEYRFFSYGDSSLLLP 345
Query: 359 K 359
+
Sbjct: 346 Q 346
>gi|308272819|emb|CBX29423.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [uncultured
Desulfobacterium sp.]
Length = 357
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 144/361 (39%), Positives = 205/361 (56%), Gaps = 15/361 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D++L +IA +P RD++RLMV+ N + S++ F++ D IV
Sbjct: 5 LLSDYDYELSEDQIAQKPASCRDASRLMVLDKNTGSTF---HNKFSEICDFISPKDIIVI 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN----SWSVYARPSKVIKKGDILHF 117
NNTKVI +L G + + T +R + SK K+G ++ F
Sbjct: 62 NNTKVIPGRLFGKKETGGKAEILILDFTGGIREQDKTGDFICECLVKTSKPAKQGSLILF 121
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA--R 175
+ L A V++ G LL FS S E + +G +PLPPYI R + +
Sbjct: 122 -----EENLTAKVLNDVKDGICLLKFS-SSENFEEILLRIGKMPLPPYIKRDKDNNKSID 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YA G+VAAPTAGLHFT LL ++ + G K +TLHVG GTF+PV+V D
Sbjct: 176 DKTSYQTVYASYSGAVAAPTAGLHFTRELLEKIKAKGTKTAEITLHVGYGTFLPVRVSDI 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H +HSE I A+A+N+V++ GG+I++VGTT +R LE A+ G + SG ++
Sbjct: 236 REHEIHSERYDISFEAAEAINTVRADGGKIIAVGTTCIRTLEYASDHKGRVLSGSGKCDL 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY F+ VD +++NFHLP+STLLMLVSAF G E Y+ AIS YRFYSYGD
Sbjct: 296 FIYPGYSFKVVDSIITNFHLPRSTLLMLVSAFAGRERILSAYKEAISQGYRFYSYGDAMF 355
Query: 356 L 356
+
Sbjct: 356 I 356
>gi|297568244|ref|YP_003689588.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurivibrio alkaliphilus AHT2]
gi|296924159|gb|ADH84969.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurivibrio alkaliphilus AHT2]
Length = 358
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 139/362 (38%), Positives = 202/362 (55%), Gaps = 14/362 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LPP IA +P RD +RL+V +SD L D+ ++L D +VFN
Sbjct: 6 LDDYDYHLPPELIAQQPPPRRDGSRLLVCDGRR--DFALSDQLFPDMLSWLAPGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVS-----PNSWSVYARPSKVIKKGDILHF 117
+T+V A+L+G + ++ + VS + SK + G L F
Sbjct: 64 DTRVFPARLSGHKESGGRVELLLLAYPVLSDVSGPGATEAEAWGLLKSSKGARPGTWLQF 123
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L A V +K G++ + + G L ++ G +PLPPYI R+ +
Sbjct: 124 GDD-----LRALVEEKGEGGKVRVRL-VLGAPLADCLARYGRMPLPPYIKRENEQEEDRR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ G+VAAPTAGLHFT LL ++ G+ + +TLHVG GTF PV+ +D
Sbjct: 178 -RYQTIYAQTPGAVAAPTAGLHFTQELLGQIKKKGVGMAHITLHVGYGTFAPVRSQDIRR 236
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E I A+ +N K+ GGRI +VGTTS+R LE A EDG +NP SG ++I
Sbjct: 237 HQIHAEEYLISRENAELINRTKAAGGRIWAVGTTSVRTLEAAAGEDGRVNPGSGSCRLYI 296
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLP+S+LL LVSA G E + Y+HA++ YRF+SYGD +
Sbjct: 297 YPGYSFKVVDNLLTNFHLPRSSLLFLVSALAGRENILRAYRHAVAERYRFFSYGDAMAII 356
Query: 358 QK 359
+K
Sbjct: 357 RK 358
>gi|166711669|ref|ZP_02242876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 367
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 140/364 (38%), Positives = 203/364 (55%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL+VV P+ P ++D V DLP L D ++
Sbjct: 12 LKKSDFHYDLPEELIAQAPLAERAASRLLVVPPS---PQALADRQVRDLPELLQPGDLLI 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 69 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIALDAG 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L G L+ LE + G +PLPPYI R+ ++ Y
Sbjct: 124 GQAEVL-------GRDGAFYLLRFEIPTPLEHWLLAAGRLPLPPYIRREPGVED--RERY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 175 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 235 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQI 294
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD L
Sbjct: 295 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFESYHHAIAQRYRFFSYGDAML 354
Query: 356 LFQK 359
L+ +
Sbjct: 355 LWSR 358
>gi|29654504|ref|NP_820196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 493]
gi|153208623|ref|ZP_01946880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii 'MSU Goat Q177']
gi|154705886|ref|YP_001424643.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii Dugway 5J108-111]
gi|165919024|ref|ZP_02219110.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 334]
gi|212218626|ref|YP_002305413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuK_Q154]
gi|46577001|sp|Q83CC6|QUEA_COXBU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038517|sp|A9KFQ4|QUEA_COXBN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713835|sp|B6J7L9|QUEA_COXB1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|29541771|gb|AAO90710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 493]
gi|120575884|gb|EAX32508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii 'MSU Goat Q177']
gi|154355172|gb|ABS76634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii Dugway 5J108-111]
gi|165917279|gb|EDR35883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 334]
gi|212012888|gb|ACJ20268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuK_Q154]
Length = 343
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 130/355 (36%), Positives = 189/355 (53%), Gaps = 18/355 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD++LP IA RP+ R +RL+ + + +S + + ND +V
Sbjct: 6 KTSDFDYNLPVELIAQRPLADRSGSRLLYIDRSRRT---VSHRQFNGFVEQVKPNDLVVL 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + ++ C + +S + + + R SK K G +
Sbjct: 63 NDTKVIPARLFGHK-----QTGGKVECLVERILSKDRFLAHIRASKAPKLGSQIIIADN- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+I + ++ S + + G IPLPPYI R D D YQ
Sbjct: 117 ------FKIIIEGRYNDLFECVLHSSASILDLLYQHGRIPLPPYIQ--REPDKDDQARYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTAGLHF L G + +VTLHVGAGTF PV+ + DH MH
Sbjct: 169 TIFAERAGAVAAPTAGLHFNEETFDALRKKGAAITYVTLHVGAGTFQPVRADSLADHRMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A+ + GR+++VGTT +R LETA T++G P++G T++FI PG+
Sbjct: 229 HEWMEVSKAVCDAIAKCRKNNGRVIAVGTTVMRCLETA-TKNGECRPYAGETDLFIYPGF 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F VD L++NFHLPKSTLLMLV AF G E + YQ A+ + YRF+SYGD L+
Sbjct: 288 QFNCVDALLTNFHLPKSTLLMLVCAFGGYELVMEAYQKAVENRYRFFSYGDAMLI 342
>gi|301063410|ref|ZP_07203946.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [delta
proteobacterium NaphS2]
gi|300442483|gb|EFK06712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [delta
proteobacterium NaphS2]
Length = 352
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 133/358 (37%), Positives = 199/358 (55%), Gaps = 10/358 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP + IA PV RD +RL++V ++D DLP+FL D +V
Sbjct: 3 KIEDYNYHLPEALIAQFPVDKRDHSRLLLVDRPTGS---LADRRFFDLPSFLGPGDLLVV 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A++ G + + S + S+ K G + F
Sbjct: 60 NNTRVVPARVFGQKESGGKVEVLVLEHPNGADCREESRLCLLKSSRRPKPGSRIFF---- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI--DARDYVD 179
+ + + + ++ G + F + ++ G +PLPPYI R + D D
Sbjct: 116 -EGSVTGEIEEIFDRGLTRISFKADEKSMAEFLAENGILPLPPYIKRSKDASLDMLDKER 174
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHFT +L++ L + G+K +TLHVG GTF PV+ ED +H
Sbjct: 175 YQTVYAERAGAVAAPTAGLHFTEDLITALRAKGVKTAPLTLHVGYGTFKPVETEDIREHR 234
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
+ E I+ TA+ +N ++ GGR+ +VGTT +R LETA TE+ + +G T + ITP
Sbjct: 235 LGEEQFVIEPHTAKLINETRADGGRVFAVGTTVVRTLETAWTEEKGVCAGAGKTGLMITP 294
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G++F VD L++NFHLP+S+LL LVSAF G TKK Y A+ YRFYSYGD L+
Sbjct: 295 GFQFHVVDGLITNFHLPRSSLLFLVSAFAGFALTKKAYAWAVGQQYRFYSYGDAMLIL 352
>gi|307245625|ref|ZP_07527711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|307254583|ref|ZP_07536416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307259037|ref|ZP_07540767.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|306853327|gb|EFM85546.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306862471|gb|EFM94432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306866704|gb|EFM98562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
Length = 361
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 134/362 (37%), Positives = 195/362 (53%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D SDL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFSDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + + + + G +PLPPYI RP + D Y
Sbjct: 113 KLGEGNGFKAIMTARHDALFELHFNEEQPVFDLLQQAGHMPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILEHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+IF
Sbjct: 231 HAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTSIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD +
Sbjct: 291 LYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAMFI 350
Query: 357 FQ 358
+
Sbjct: 351 NK 352
>gi|158337753|ref|YP_001518929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acaryochloris marina MBIC11017]
gi|189038509|sp|B0C0B9|QUEA_ACAM1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|158307994|gb|ABW29611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acaryochloris marina MBIC11017]
Length = 369
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 200/358 (55%), Gaps = 13/358 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP + IA P+ PRD +RL+VV + DL A L D +VFN
Sbjct: 12 LQAYDYLLPETFIAQTPLVPRDRSRLLVV-----QQQAHQHKIFQDLVALLQPGDLLVFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + + + L PN+W RP + +K G + F +
Sbjct: 67 DTRVIPARLLGRKLNSELAQP--VEVFLLEPRQPNTWLALVRPGRRLKPGAQIEFGPPER 124
Query: 123 QS-RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
R E D G I+ S+ E + +G +PLPPYI YQ
Sbjct: 125 PLLRAEILATDADTRGRIIQFESLVEEPFEDLLEQLGEVPLPPYIQE----STAQPEQYQ 180
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHFT LL+RL S GI +TLHVG GTF PV+ +D H MH
Sbjct: 181 TVYAQHPGAVAAPTAGLHFTPELLARLQSEGINQAHLTLHVGIGTFRPVETDDILQHHMH 240
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + A T A+ + K+ GGR+++VGTT R LE A ++G + PW G TN+FI P Y
Sbjct: 241 SEWVDLPAATVDAIRTTKASGGRVIAVGTTVTRALEGAC-QNGPLVPWQGRTNLFIYPSY 299
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
++R VD L++NFHLPKS+LLMLVSA G E +Y+ AI+ YRFYS+GD L+ +
Sbjct: 300 QWRVVDGLITNFHLPKSSLLMLVSALVGRERLLALYEDAIAQQYRFYSFGDAMLVLPE 357
>gi|303252317|ref|ZP_07338483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307247746|ref|ZP_07529784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|302648776|gb|EFL78966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306855776|gb|EFM87941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
Length = 361
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 135/362 (37%), Positives = 195/362 (53%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D SDL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFSDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + + + + G +PLPPYI RP + D Y
Sbjct: 113 KLGEGNGFKAIMTARHDALFELHFNEEQPVFDLLQQAGHMPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+IF
Sbjct: 231 HAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTSIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD +
Sbjct: 291 LYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAMFI 350
Query: 357 FQ 358
+
Sbjct: 351 NK 352
>gi|224826233|ref|ZP_03699335.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Lutiella
nitroferrum 2002]
gi|224601334|gb|EEG07515.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Lutiella
nitroferrum 2002]
Length = 355
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 207/359 (57%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P R ++RL+ V L ++D + + D +V
Sbjct: 15 MQLSDFDYHLPDELIAQHPPEHRGASRLLHVDG-----LALADLSFGAVLERIQPGDVMV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + ++ + R SK K G + F
Sbjct: 70 FNDTRVIKARLFGEKAS-----GGKVEALVERVLDEHTVWAHVRASKSPKPGSTITF--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
R +A ++++ + + + + + G +PLPPYI R D Y
Sbjct: 122 --AGRWQAEMVER--DDALFKLRFLDAENVFDILEASGKLPLPPYIERDTDSDDDSR--Y 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT +L L + G+ + +VTLHVGAGTF PV+VE+ +H M
Sbjct: 176 QTVYARERGAVAAPTAGLHFTEAMLDALRAKGVILAYVTLHVGAGTFQPVRVENIAEHKM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI I T A+ + + G ++++VGTTS+R LE+A + G + G T+IFITPG
Sbjct: 236 HSEIYEIPPATVDAIAAAHAAGRKVLAVGTTSMRALESAA-QGGALVAGRGETDIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HA+ H YRF+SYGD LL ++
Sbjct: 295 YRFRVVDRLLTNFHLPKSTLLMLVSAFAGVEPIRNAYRHAVEHRYRFFSYGDAMLLEKQ 353
>gi|254487456|ref|ZP_05100661.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. GAI101]
gi|214044325|gb|EEB84963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. GAI101]
Length = 358
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 169/361 (46%), Positives = 222/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLP + IA RP PR SARL+V V+ D +V+DLP +L + D +V
Sbjct: 5 LKLSDFDFDLPEALIATRPAVPRTSARLLVADG-----PVLHDKVVTDLPDWLRAGDRLV 59
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + I TL S +W+ +P K +K G+ + F
Sbjct: 60 LNDTRVIPARLTGARHRDSAQGPVQARIEITLLEPRSDGTWAALIKPLKKLKVGEDVVFS 119
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT+I G+ L F+ +G + + ++ G +PLPPYIA KRP DA+D
Sbjct: 120 PD-----LRATLIG-TADGQGHLQFNCAGDDFDAALNAAGAMPLPPYIAAKRPADAQDLT 173
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L G+ VTLHVGAGTF+PVKV+D DH
Sbjct: 174 DYQTVFARNLGAVAAPTASLHFDDALLQTLADKGVTFSHVTLHVGAGTFLPVKVDDIADH 233
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A A + + K+ GGR++ VGTT+LRL+ETA G I W G T+IFIT
Sbjct: 234 KMHSEWGKVSAQAAAEIAATKAAGGRVIPVGTTALRLVETAAR-GGTIKAWEGDTDIFIT 292
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTL+MLV+A G E K +Y HAIS YRF+SYGD SLL
Sbjct: 293 PGFTFNVADALMTNFHLPKSTLMMLVAALMGQEAIKTLYAHAISSNYRFFSYGDASLLIP 352
Query: 359 K 359
+
Sbjct: 353 E 353
>gi|169824511|ref|YP_001692122.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 29328]
gi|302380757|ref|ZP_07269222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ACS-171-V-Col3]
gi|303233794|ref|ZP_07320448.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna BVS033A4]
gi|238687748|sp|B0S1J2|QUEA_FINM2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167831316|dbj|BAG08232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 29328]
gi|302311700|gb|EFK93716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ACS-171-V-Col3]
gi|302495228|gb|EFL54980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna BVS033A4]
Length = 345
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 197/357 (55%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++L IA P+ RD ++LMV+ + ++ +LN D +V
Sbjct: 1 MNTDDFDYELDEKFIAQTPLDKRDESKLMVMDRFNGNTEI---KKFYNIIDYLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R +E++I L + W +P K +K ++ F
Sbjct: 58 CNNTRVIPARLFGHRP----EKEEKIEVLLLQQTEDK-WECLVKPGKKMKLNQVIEFSDS 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+D G +L F GI E ++ +G +PLPPYI K Y
Sbjct: 113 -----VSAKVVDITEDGSRILKFEYEGI-FEERLDELGNMPLPPYIKEKLND----KERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ GI V F+TLHVG GTF PVKV+D DH M
Sbjct: 163 QTVYSKHNGSAAAPTAGLHFTNELLEKIKDKGIYVVFLTLHVGLGTFRPVKVDDVKDHHM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-NPWSGFTNIFITP 299
HSE I T +N KS+G I++VGTTS+R LET T + SG+T+IFI P
Sbjct: 223 HSEYYTISQETVDIINRQKSKGHNIIAVGTTSVRTLETVTHNNNSKLVAESGWTDIFIYP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F VD L++NFHLPKSTL+MLVSAF E Y+ A + +RF+S+GD +
Sbjct: 283 GFEFNIVDSLITNFHLPKSTLMMLVSAFSKKEYIFDAYEKAKQNDFRFFSFGDAMFI 339
>gi|270263540|ref|ZP_06191809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera 4Rx13]
gi|270042424|gb|EFA15519.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera 4Rx13]
Length = 356
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 204/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L + D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSGCRLLQLDGPSGA---LTHGVFTDLLDNLEAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKVS-----GGKIEVLVERVLDDHRVLAHVRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + D + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 ESVAATMVARHDTLFE-----LRFNDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L + GI++ FVTLHVGAGTF PV+VE ++H+M
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALRAKGIEMAFVTLHVGAGTFQPVRVETIEEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+V+VGTTS+R LE+A ++D +I P+ G T+IFI
Sbjct: 226 HAEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANASKDALIAPFFGDTSIFIF 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALVTNFHLPESTLIMLVSAFAGYKNTMHAYQQAVAEQYRFFSYGDAMFISR 345
>gi|315022264|gb|EFT35292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Riemerella
anatipestifer RA-YM]
gi|325336609|gb|ADZ12883.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Riemerella anatipestifer RA-GD]
Length = 349
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 197/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+F+LPP +A P RD ARLMV++ I L D+ + + ND +
Sbjct: 1 MKTSDFNFNLPPELLAEHPSEHRDEARLMVLNRKNQT---IEHKLFKDVIDYFDENDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + +I L + ++ W V P++ I+ G+ L F
Sbjct: 58 FNNTKVFPARLFGNK----EKTGAKIEVFLLRELDKDTRVWDVLVDPARKIRIGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E ++ +G PLP YI R ++ D
Sbjct: 113 --DEDESLVAEVIDNTTSRGRTLRFLYDGSYEEFRAKLKELGETPLPKYIK--REVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF P++VED
Sbjct: 169 AERYQTIYAKKEGAVAAPTAGLHFSKHLMKRLEIKGINFAEVTLHVGLGTFNPIEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M E FID A +N RI +VGTT++R +ET+ + + ++ + G+TN F
Sbjct: 229 KHKMECEEAFIDQKNADIINKAIDEDRRICAVGTTTMRTIETSVSSNRKLSAYHGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D +++NFH PKSTL+M+++AF G + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IYPPYDFAVADSMITNFHTPKSTLIMMIAAFAGKDFVMHAYEEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|110833361|ref|YP_692220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alcanivorax
borkumensis SK2]
gi|122959653|sp|Q0VSA0|QUEA_ALCBS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110646472|emb|CAL15948.1| S-adenosylmethionine:tRNAribosyltransferase-isom e rase
[Alcanivorax borkumensis SK2]
Length = 359
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 198/359 (55%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA P R ARL+ + + DL + ++ D ++
Sbjct: 1 MNVDDFDFELPDRLIARHPPAQRRDARLLAL-----TCDALEHQQFPDLLSHVHPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + V + + R SK K G L F
Sbjct: 56 FNDTRVIPARLFGQKES-----GGKVEVLIERVVDDHEALAHVRASKSPKPGSWLEFAKG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG---IELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V + +L FS+ G L + L+G +PLPPYI RP + D
Sbjct: 111 -----IRAQVTGRRGA-LFILHFSLPGNGCDTLLSALELIGHVPLPPYI--DRPDEDGDM 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ G+VAAPTAGLHF +L+ L G+ + FVTLHVGAGTF PV+V+ +D
Sbjct: 163 ERYQTVYAREPGAVAAPTAGLHFDDAMLAALEQRGVDIGFVTLHVGAGTFQPVRVDKVED 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE I + + +RGGR+V+VGTT+LR LE A+ G+ G T+IFI
Sbjct: 223 HHMHSERYQIPGSLVEQVAQAHARGGRVVAVGTTALRALEAASQSGGLH-AGQGETDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRFR VD L++NFHLPKSTLLML+SAF G + Y+ AI YRF+SYGD +
Sbjct: 282 FPGYRFRLVDALVTNFHLPKSTLLMLISAFAGRDRIMGAYRAAIEAQYRFFSYGDAMFI 340
>gi|254448135|ref|ZP_05061598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HTCC5015]
gi|198262261|gb|EDY86543.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HTCC5015]
Length = 349
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 202/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+ + + D +++ L+ D +V
Sbjct: 1 MKTQDFHFDLPSELIAQVPLERRVDSRLLCLSGDSGPV----DRQFANVIDMLDPGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G + ++ + + + R S+ K G +
Sbjct: 57 LNDTRVIPARLHGNKAS-----GGKLEVLIERITDEHRALCHIRCSRSPKPGTRIVL--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EA ++ + G + V L + G +PLPPYI R +A D Y
Sbjct: 109 --EGVVEAEILGR--QGALFDVQFDPAKPLMDWLLEYGHMPLPPYIE--RSDEASDQERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF ++++ L + G+++ VTLHVGAGTF PVKV++ +H M
Sbjct: 163 QTVFAEKAGAVAAPTAGLHFDQDMMAALEAKGVRIAKVTLHVGAGTFQPVKVDEIAEHTM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T +A++ +SRGGR+V+VGTT +R LE+ E P+ G T+IFITPG
Sbjct: 223 HSERIDVGEETCRAISETRSRGGRVVAVGTTVVRSLESLP-EGDHPQPYCGETDIFITPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ FR +D+L++NFHLP STLLMLVSA G ++ Y+HA+ YRF+SYGD + +
Sbjct: 282 FSFRFIDVLITNFHLPCSTLLMLVSALGGYDKVMSAYRHAVEQRYRFFSYGDAMWVENQ 340
>gi|303251428|ref|ZP_07337604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307252337|ref|ZP_07534234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|302649660|gb|EFL79840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860259|gb|EFM92275.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
Length = 361
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 136/362 (37%), Positives = 195/362 (53%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D SDL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFSDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + + + + G +PLPPYI RP + D Y
Sbjct: 113 KLGEGNGFKAIMTARHDALFELHFNEEQPVFDLLQQAGHMPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF + L +L S G+ + FVTLHVGAGTF PV+V++ DH M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDNPTLEKLKSKGVNIAFVTLHVGAGTFQPVRVDNILDHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+IF
Sbjct: 231 HAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTSIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD +
Sbjct: 291 LYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAMFI 350
Query: 357 FQ 358
+
Sbjct: 351 NK 352
>gi|84624010|ref|YP_451382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|188576285|ref|YP_001913214.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|84367950|dbj|BAE69108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|188520737|gb|ACD58682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 367
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 139/364 (38%), Positives = 202/364 (55%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL+VV P+ P ++D DLP L D ++
Sbjct: 12 LKKSDFHYDLPEELIAQAPLAERAASRLLVVPPS---PQALADRRARDLPELLQPGDLLI 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 69 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIALDAG 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L G L+ LE + G +PLPPYI R+ ++ Y
Sbjct: 124 GQAEVL-------GRDGAFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVED--RERY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 175 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 235 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQI 294
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD L
Sbjct: 295 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYHHAIAQRYRFFSYGDAML 354
Query: 356 LFQK 359
L+ +
Sbjct: 355 LWSR 358
>gi|294668511|ref|ZP_06733608.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
elongata subsp. glycolytica ATCC 29315]
gi|291309474|gb|EFE50717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
elongata subsp. glycolytica ATCC 29315]
Length = 347
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 152/359 (42%), Positives = 206/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA +P R ++RL+ + + D + S LP D +V
Sbjct: 1 MQLSDFDFDLPEHLIAQQPPAERGASRLL----SALPGESLRDEMFSVLPQLAGRGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKTS-----GGKIEALIERVLDAHTALAHIRSSKSPKPGTRLLFDGG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G GE+ + + R + G +PLPPYI R D D Y
Sbjct: 112 IGAE-------MTAREGELFRLHFDGEETVYRLLEQHGQLPLPPYIE--RAADGDDESRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL+ L + G+++ VTLHVGAGTF PV+ E+ +H M
Sbjct: 163 QTVYAKHQGAVAAPTAGLHFTDTLLAELKAKGVRLAEVTLHVGAGTFQPVRTENIAEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + K+ G ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWYDVPPETVAAVEAAKAEGAKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR D L++NFHLPKSTLLMLVSAF GIEE + +Y+HA++ YRF+SYGD +L +K
Sbjct: 283 YRFRVADRLITNFHLPKSTLLMLVSAFSGIEEIRAVYRHAVAKEYRFFSYGDAMVLGRK 341
>gi|292487435|ref|YP_003530307.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora CFBP1430]
gi|292898676|ref|YP_003538045.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora ATCC 49946]
gi|291198524|emb|CBJ45632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora ATCC 49946]
gi|291552854|emb|CBA19899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora CFBP1430]
gi|312171537|emb|CBX79795.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora ATCC BAA-2158]
Length = 356
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 198/360 (55%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ ++ ++ + +DL LN D +V
Sbjct: 1 MRVADFTFELPESLIAHYPQAQRSGCRLLSLNGPDGA---LTHGVFTDLLHQLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARIFGRKAS-----GGKIEVLVERMLDEKRVLAHVRSSKAPKPGSELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + D + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ESVQAIMVARHDTLFE-----IEFNDARPVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLEALREKGIETVFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A E+ +I P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGKRVIAVGTTSVRSLESAAQAAENALIAPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALVTNFHLPESTLIMLVSAFAGYQHTMHAYQQAVAQRYRFFSYGDAMFITR 345
>gi|149184807|ref|ZP_01863125.1| Queuosine biosynthesis protein [Erythrobacter sp. SD-21]
gi|148832127|gb|EDL50560.1| Queuosine biosynthesis protein [Erythrobacter sp. SD-21]
Length = 342
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 181/358 (50%), Positives = 229/358 (63%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRD+AR++VV +D V DLPA L+ D +V
Sbjct: 1 MKVDLFDFELPNERIALRPARPRDAARMLVVRG----AEPFADRTVLDLPAMLDPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E +I TLH RV W + R +K ++ G+I F
Sbjct: 57 FNDTRVIPAQLEGRR------GEAKIGATLHKRVDLRRWQAFIRNAKRLRVGEIATFGGG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ G +L F +E + GT+PLPPYIA KR DA+D DY
Sbjct: 111 -----VTALAEERLADGSFILFFE-GEEPVEVLLERAGTMPLPPYIAGKRATDAQDREDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK G+VAAPTA LHFT L+ L GI +TLHVGAGTF+PVK +DT+DH M
Sbjct: 165 QTMFAKEDGAVAAPTAALHFTDRLMGALAERGIGTETLTLHVGAGTFLPVKADDTEDHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I+ TA LN+V++ G R+++VGTTSLRLLE+AT ED +I P++G T+IFITPG
Sbjct: 225 HAEWGRIEQDTADRLNAVRAGGNRVIAVGTTSLRLLESATGEDKVIRPFAGDTDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FRA+D LM+NFHLPKSTL MLV A G E + Y HAI+ YRFYSYGD+SLL
Sbjct: 285 YSFRAIDGLMTNFHLPKSTLFMLVGALMGRERMQAAYAHAIATEYRFYSYGDSSLLLP 342
>gi|313205951|ref|YP_004045128.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase [Riemerella
anatipestifer DSM 15868]
gi|312445267|gb|ADQ81622.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Riemerella
anatipestifer DSM 15868]
Length = 349
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 195/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+F+LPP +A P RD ARLMV++ I L D+ + + ND +
Sbjct: 1 MKTSDFNFNLPPELLAEHPSEHRDEARLMVLNRKNQT---IEHKLFKDVIDYFDENDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + +I L + W V P++ I+ G+ L F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGAKIEVFLLRELDKETRVWDVLVDPARKIRIGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E ++ +G PLP YI R ++ D
Sbjct: 113 --DEDESLVAEVIDNTTSRGRTLRFLYDGSYEEFRAKLKELGETPLPKYIK--REVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF P++VED
Sbjct: 169 AERYQTIYAKKEGAVAAPTAGLHFSKHLMKRLEIKGINFAEVTLHVGLGTFNPIEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M E FID A +N RI +VGTT++R +ET+ + + ++ + G+TN F
Sbjct: 229 KHKMECEEAFIDQKNADIINKAIDEDRRICAVGTTTMRTIETSVSSNRKLSAYHGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D +++NFH PKSTL+M+++AF G + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IYPPYDFAVADSMITNFHTPKSTLIMMIAAFAGKDFVMHAYEEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|327402924|ref|YP_004343762.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Fluviicola
taffensis DSM 16823]
gi|327318432|gb|AEA42924.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Fluviicola
taffensis DSM 16823]
Length = 352
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 145/361 (40%), Positives = 196/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP IA P RD ARLMV+H I L D+ + D ++
Sbjct: 4 MKLSEFSFDLPDELIAEYPSEHRDEARLMVIHRETG---KIEHRLFKDIINYFGEGDVMI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNT+V A++ G + + +I L ++ S W V P++ I+ G+ L+F
Sbjct: 61 MNNTRVFPARMYGNK----EKTGAKIEVFLLRELNRESLLWDVLVDPARKIRIGNKLYFG 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E + +I+ +G PLP YI R ++ D
Sbjct: 117 DDDS---LVAEVIDNTTSRGRTLRFLFDGPYEEFKAKITELGETPLPKYIK--REVEETD 171
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ LL RL GI VTLHVG GTF V+VED
Sbjct: 172 EERYQTIYAKEEGAVAAPTAGLHFSRELLKRLELKGINFAEVTLHVGLGTFRSVEVEDLT 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I A+ +N K R+ ++GTTS+R +ET+ + D ++ + G+TN F
Sbjct: 232 KHKMDSEQVIITDKAARIVNEAKKNKKRVCAIGTTSMRAVETSVSTDNMLKAFDGWTNKF 291
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D L++NFH P STLLM++SAFCG + + Y AI Y+FYSYGD L+
Sbjct: 292 IFPPYDFSIADSLVTNFHTPLSTLLMMISAFCGHDLMMEAYHEAIKEKYKFYSYGDAMLI 351
Query: 357 F 357
Sbjct: 352 L 352
>gi|58582108|ref|YP_201124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|58426702|gb|AAW75739.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae KACC10331]
Length = 394
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 139/364 (38%), Positives = 202/364 (55%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL+VV P+ P ++D DLP L D ++
Sbjct: 39 LKKSDFHYDLPEELIAQAPLAERAASRLLVVPPS---PQALADRRARDLPELLQPGDLLI 95
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++ +
Sbjct: 96 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIALDAG 150
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L G L+ LE + G +PLPPYI R+ ++ Y
Sbjct: 151 GQAEVL-------GRDGAFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVED--RERY 201
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 202 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 261
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 262 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQI 321
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD L
Sbjct: 322 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYHHAIAQRYRFFSYGDAML 381
Query: 356 LFQK 359
L+ +
Sbjct: 382 LWSR 385
>gi|330894474|gb|EGH27135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. mori str. 301020]
Length = 354
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 198/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF V+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQTVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR ++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRGIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|331005923|ref|ZP_08329271.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC1989]
gi|330420279|gb|EGG94597.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC1989]
Length = 349
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 134/360 (37%), Positives = 197/360 (54%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P R +RL+ + N + + D+ L + D +V
Sbjct: 1 MRRQDFSYELPEDLIAFTPAAERTGSRLLCLEGNTGA---LQHNEFPDIIHQLQAGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A++ G + ++ + + + R SK K I+
Sbjct: 58 FNDTQVIPARVFGQKE-----TGGKVEILVERLIGTQQVWAHIRASKSPKANTIITL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++ TV + L + + G +PLPPYI R+ D + Y
Sbjct: 110 --DNGVDVTVKGRCGADNALFLVDFGENGALDVLQQAGHMPLPPYIEREDVPDDQ--ERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF +L+ + GI + +VTLHVGAGTF PV+V++ DHIM
Sbjct: 166 QTVYGCKPGAVAAPTAGLHFDESLMKAIADKGIIIVYVTLHVGAGTFQPVRVDNIADHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE+ + A A+N K+ G R+V+VGTTS+R LE+A + + P+ G T+IFIT
Sbjct: 226 HSEVIDVSADVCDAINQAKAEGRRVVAVGTTSMRCLESAAKYSHGDTLMPFQGETDIFIT 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+F+ VD L++NFHL +STLLMLVSAF G E T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYQFQVVDALVTNFHLSESTLLMLVSAFAGYEHTMHAYQQAVAQRYRFFSYGDAMFITR 345
>gi|113474574|ref|YP_720635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Trichodesmium erythraeum IMS101]
gi|110165622|gb|ABG50162.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Trichodesmium erythraeum IMS101]
Length = 369
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 137/371 (36%), Positives = 202/371 (54%), Gaps = 29/371 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++LP IA PV PRDS+RLMV+ L + + DLP L D +V N
Sbjct: 8 IEAYDYELPQELIAQNPVVPRDSSRLMVIE-----SLTHNHRIFRDLPDLLQPEDLLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF----- 117
NT+VI A+L G + ++ L +++ +SW +P K G + F
Sbjct: 63 NTRVIPARLYGQKTS-----GAQVEILLLKQITNDSWLALVKPGKHFSAGTRIEFEPNSS 117
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
F+ D + + ID+ G +L + + + G IP PPY+ + +
Sbjct: 118 FTCDYKLQATVLAIDQETGGRVLQFYWPQEVSWLDLLKQFGHIPFPPYVTGSQALT---- 173
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y+KI G++AAPTAGLHFT LL +L I F+TLHVG GTF PV+V+D
Sbjct: 174 EQYQTVYSKIAGAIAAPTAGLHFTDELLYKLEQGNIGRAFITLHVGIGTFRPVEVKDITT 233
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII----------N 287
H +HSE + + + ++ K++GGRI++VGTT +R +E A +
Sbjct: 234 HNIHSEWVEVSSLSVDKIHQTKAKGGRIIAVGTTVVRAIEAAALANDNYSTQESLIPLIR 293
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+S +T+IFI PGY++R VD L++NFHLP+S+LLMLVSA G + +YQ AI YRF
Sbjct: 294 PFSDYTDIFIYPGYKWRVVDGLITNFHLPRSSLLMLVSAMIGRKRLLSLYQDAIDQKYRF 353
Query: 348 YSYGDTSLLFQ 358
YS+GD +
Sbjct: 354 YSFGDAMFILP 364
>gi|269138314|ref|YP_003295014.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Edwardsiella tarda EIB202]
gi|267983974|gb|ACY83803.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Edwardsiella tarda EIB202]
gi|304558345|gb|ADM41009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella tarda FL6-60]
Length = 357
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 197/360 (54%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + + +D+ LN D +V
Sbjct: 1 MRVSDFTFELPDELIARYPQEQRSGCRLLSLDGPTGAR---EHGVFTDIVDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKTS-----GGKVEVLVERVLDRARVLAHVRASKAPKPGAELLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ G +PLPPYI RP D D Y
Sbjct: 113 E---DIRATMLAR--HDALFELGFDDPRDVLAILNAAGHMPLPPYI--DRPDDEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL RL GI++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSSRPGAVAAPTAGLHFDQPLLDRLRDKGIEMAFVTLHVGAGTFQPVRVESIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAAASKQALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G T Y+ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALITNFHLPESTLIMLVSAFAGYRHTLDAYRDAVARQYRFFSYGDAMYITR 345
>gi|221632729|ref|YP_002521950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermomicrobium roseum DSM 5159]
gi|221156280|gb|ACM05407.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermomicrobium roseum DSM 5159]
Length = 353
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 129/360 (35%), Positives = 201/360 (55%), Gaps = 20/360 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+D++LP IA P+ PRD+ARLMVV I + +LP+ L+ D ++ N
Sbjct: 9 LHEYDYELPEELIAQEPIEPRDAARLMVVRRAT---HSIEHRIFRELPSLLDPGDLLIVN 65
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHFFSQD 121
+++V+ A+L G R ++ L + + W ARP++ ++ G+ + +D
Sbjct: 66 DSRVLPARLLGHRL-----TGGKVEILLVQPLEGTTVWLALARPARKLRPGETITIQPRD 120
Query: 122 GQSRLEA--TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
Q A + ++ + G++++ + ++ G +PLPPYI R
Sbjct: 121 PQFAQPAPLRIRERRSGGQVIVELDPG---IAERLDAFGHVPLPPYIHRPLSD----PER 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ GSVAAPTAGLHFT LL L GI++ +TLHVG GTF P++V D H
Sbjct: 174 YQTVYARHPGSVAAPTAGLHFTERLLDELRQRGIRIAPLTLHVGIGTFKPIEVTDVRLHK 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFI 297
MH+E + A T + ++ RIV+VGTT+ R LE+ P +G+T+++I
Sbjct: 234 MHAEWYAVPAETVSLIRETRAANRRIVAVGTTAARTLESIADALTGDTEGPITGWTDLYI 293
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R VD L++NFHLP+STL++LV++F G E + Y+ A+ YRFYS+GD L+
Sbjct: 294 YPGYHWRVVDALITNFHLPRSTLILLVASFAGRELILEAYREAVQQRYRFYSFGDAMLIL 353
>gi|330815590|ref|YP_004359295.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia gladioli BSR3]
gi|327367983|gb|AEA59339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia gladioli BSR3]
Length = 350
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 143/362 (39%), Positives = 201/362 (55%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V ++ P ++D +DLP + + D +VF
Sbjct: 3 KLSDFDFDLPPELIAQTALPERSASRLLEVDGSV-APTRLTDRRFTDLPECIGAGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + + R SK +G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGKIEVLVERVIGSRTVLAQVRSSKSPVEGSTLRLAE-- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
E TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 115 ---AFEVTVGERVEPFFTLHF----PEDCLALIERHGRLPLPPYIEHD--PDATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF LL+ L + G++ +TLHVGAGTF PV+V++ +H MH
Sbjct: 166 TVFASNPGAVAAPTAGLHFDEALLATLRARGVETATLTLHVGAGTFQPVRVDNIAEHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIFI 297
SE + + + ++RGG++V+VGTTS+R LE A E + P T+IFI
Sbjct: 226 SEWYELSDTLVAQIAATRARGGKVVAVGTTSMRALEAAARDAQREGRALAPTRAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD LL
Sbjct: 286 TPGYAFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRDAYRHAIAERYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|260063740|ref|YP_003196820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Robiginitalea biformata HTCC2501]
gi|88783185|gb|EAR14358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Robiginitalea biformata HTCC2501]
Length = 349
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 144/361 (39%), Positives = 198/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ++LMVVH I L DL + +D +V
Sbjct: 1 MKLSHFNFELPKELLAEYPTENRDESKLMVVHRETG---KIEHKLFKDLIDYFEEDDVVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + R++ +G PLP YI R + D
Sbjct: 114 EDEA---LVAEVIDNTTSRGRTLRFLYDGSYTDFRRKMRELGQTPLPKYIK--RDPEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI +TLHVG GTF PV+VED
Sbjct: 169 ESRYQTIYAKYEGAVAAPTAGLHFSKHLLKRLEIKGINFAELTLHVGLGTFSPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID + +N+ K ++ +VGTT +R LE+A + + ++N G+TN F
Sbjct: 229 KHKMDSEELVIDERATEIVNTAKKNKRKVCAVGTTVMRGLESAVSSEHMLNTHEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLPKSTLLM+VSAF G + K+ Y+ AI YRFYSYGD L+
Sbjct: 289 IFPPYEFSIANCMVTNFHLPKSTLLMMVSAFMGHDLMKRAYKEAILEQYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|91792758|ref|YP_562409.1| S-adenosylmethionine [Shewanella denitrificans OS217]
gi|122968830|sp|Q12PE0|QUEA_SHEDO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91714760|gb|ABE54686.1| S-adenosylmethionine [Shewanella denitrificans OS217]
Length = 346
Score = 381 bits (978), Expect = e-104, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 200/361 (55%), Gaps = 19/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R+++RL+ + ++D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPTAQRNASRLLTLDGPTGA---LADKQFTDLFEMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K +++
Sbjct: 58 FNNTRVIPARLFGQKA-----TGGKLEILVERMLDDKRILAHVRSSKSPKVDTLINL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG+ +++ LL L VG +PLPPYI RP + D Y
Sbjct: 110 DGEHQMKMIARHDALFELELLSELTILEVL----EQVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF +LS L G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNKTPGAVAAPTAGLHFDDAMLSALKHKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN--PWSGFTNIFIT 298
HSE + + K+ G R+++VGTTS+R LE+A G +SG T+IFI
Sbjct: 224 HSEWADVPQDVVDLIAQTKAAGNRVIAVGTTSVRSLESAAKACGDKPLATFSGDTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ VD +++NFHLP+STL+ML+SAF G++E + YQHAI+ YRF+SYGD L +
Sbjct: 284 PGYEFKVVDAMVTNFHLPESTLIMLISAFTGVDEVRYAYQHAIAQKYRFFSYGDAMFLTK 343
Query: 359 K 359
K
Sbjct: 344 K 344
>gi|165976181|ref|YP_001651774.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|226713832|sp|B0BP45|QUEA_ACTPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|165876282|gb|ABY69330.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 3 str. JL03]
Length = 361
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 134/362 (37%), Positives = 194/362 (53%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + + + + G +PLPPYI RP + D Y
Sbjct: 113 KLGEGNGFKAIMTARHDALFELHFNEEQPVFDLLQQAGHMPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+IF
Sbjct: 231 HAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTSIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD +
Sbjct: 291 LYPGKTFRVVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAMFI 350
Query: 357 FQ 358
+
Sbjct: 351 NK 352
>gi|332187845|ref|ZP_08389579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas sp. S17]
gi|332012195|gb|EGI54266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas sp. S17]
Length = 345
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 182/358 (50%), Positives = 235/358 (65%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LPP RIAL P PRDSAR++V+ + + D VSDLP L + D +V
Sbjct: 1 MNVDLFDFALPPERIALYPASPRDSARMLVLDGDAT-----RDERVSDLPQALRAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R + +I TLH R W + R +K +++GD++ F +
Sbjct: 56 FNDTRVIPAQLQGTR------GDAKIGATLHKREGVRRWRAFIRNAKRLREGDVIDFGAG 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ AT D+ G L F+ +E + GT+PLPPYIA+KR + +D DY
Sbjct: 110 -----VSATANDRAEDGSFALDFA-GDEPVELLLERAGTMPLPPYIAQKRGVTEKDAEDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFT LL L + GI+ +TLHVGAGTF+PVK +DT DH M
Sbjct: 164 QTMFAQEPGAVAAPTAALHFTPGLLESLAAAGIEHATLTLHVGAGTFLPVKADDTVDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA TA LN+VK+RGGR+++VGTTSLRL+E+A EDG+I P+ G T IFITPG
Sbjct: 224 HAEWGRIDAATAHRLNAVKARGGRVIAVGTTSLRLIESAAGEDGVIRPFEGDTAIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR +D LM+NFHLP+STL MLVSA G++ + Y HAI+ YRFYSYGD SLL
Sbjct: 284 YRFRGIDGLMTNFHLPRSTLFMLVSALMGLDRMQAAYAHAIAQGYRFYSYGDASLLLP 341
>gi|149371547|ref|ZP_01890963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [unidentified eubacterium SCB49]
gi|149355174|gb|EDM43734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [unidentified eubacterium SCB49]
Length = 349
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 190/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +A P RD +RLMV++ I DL + +D +
Sbjct: 1 MKLSNFGFELPDELLAEYPSENRDESRLMVLNRKEQT---IEHKKFKDLIDYFEEDDILC 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLFGNK----EKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++ +G PLP YI R ++ D
Sbjct: 114 DDET---LVAEVIDNTTSRGRTLRFLFDGSYEEFRNKLKELGETPLPKYIK--RDVEEDD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL R G+ V VTLHVG GTF V+VED
Sbjct: 169 AERYQTIYAKEEGAVAAPTAGLHFSKHLLKRFEIKGVNVAEVTLHVGLGTFSAVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I T +N RI +VGTT +R LE++ + + +N +SG+TN F
Sbjct: 229 KHKMDSEEMHIGKETVDLINQGLIDKRRICAVGTTVMRSLESSVSSNHTLNEFSGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + T++ Y+ AI Y FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMITNFHTPKSTLLMMVSAFAGHDFTQRAYEEAIKEKYNFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|310766809|gb|ADP11759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia sp.
Ejp617]
Length = 358
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 205/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ ++ ++ + +DL LN D +V
Sbjct: 3 MRVADFTFELPESLIAHYPQTQRSGCRLLSLNGPDGA---LTHGVFTDLLHKLNPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK + G L
Sbjct: 60 FNNTRVIPARIFGRKVS-----GGKIEVLVERMLDEKRVLAHVRSSKAPRPGSELLLGDD 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 115 E---NVQATMLARHDALFEIKFNDARP--VLDILNSIGHMPLPPYI--DRPDEDADRELY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 168 QTVYSQKPGAVAAPTAGLHFDEPLLEALREKGIETAFVTLHVGAGTFQPVRVDTIEEHIM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + +A+ + K+RG R+++VGTTS+R LE+A E+ +I P+ G T IFI
Sbjct: 228 HAEYAEVPQDVVEAVLACKARGKRVIAVGTTSVRSLESAAQAAENALIAPFFGDTKIFIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 288 PGYHYQVIDALVTNFHLPESTLIMLVSAFAGYQNTMHAYQQAVAEQYRFFSYGDAMFITR 347
>gi|238918971|ref|YP_002932485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella ictaluri 93-146]
gi|259551449|sp|C5BCF6|QUEA_EDWI9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238868539|gb|ACR68250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Edwardsiella ictaluri 93-146]
Length = 357
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 195/360 (54%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + + +D+ LN D +V
Sbjct: 1 MRVSDFTFELPDELIARYPQEQRSGCRLLSLDGPTGAR---QHGVFTDIVDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKVEVLVERVLDRTRVLAHVRASKAPKPGAGLLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ G +PLPPYI RP + D Y
Sbjct: 113 E---DIRATMLAR--HDALFELGFDDPRDVLTILNAAGHMPLPPYI--DRPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL RL G+++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSSRPGAVAAPTAGLHFDQPLLDRLRDKGVEMAFVTLHVGAGTFQPVRVESIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI--INPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAAANKQALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G T Y+ A+ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALITNFHLPESTLIMLVSAFAGYRHTLDAYRDAVVQQYRFFSYGDAMYITR 345
>gi|237737787|ref|ZP_04568268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium mortiferum ATCC 9817]
gi|229419667|gb|EEO34714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium mortiferum ATCC 9817]
Length = 343
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 195/356 (54%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D+ LP I P PRD ARLM+V I D+ +L D +V
Sbjct: 4 KLHDYDYHLPEELIGQEPREPRDHARLMLVDK---TNKKIEHKHFYDIIDYLQEGDILVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + L R++ ++W +P+K +K G L+
Sbjct: 61 NSTKVIPARLFGHKE-----TGGVLEILLIKRINLDTWECLLKPAKKLKLGQKLYMG--- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
S L A +I+ + G +L F+ G E + +G +PLPPYI ++ YQ
Sbjct: 113 QNSELVAELIEIKDDGNRVLKFTYEG-AFEEVLDKLGNMPLPPYI----VETLKEKERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ SVAAPTAGLHFT LL ++ GIK+ + L VG GTF PV+ ED DH MH
Sbjct: 168 TVYAQRGESVAAPTAGLHFTKELLEKIEKKGIKIVDIFLEVGLGTFRPVQTEDVLDHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
EI I A +N K+ G RI+SVGTTS R LE++ E+G + T+IFI PGY
Sbjct: 228 EEIFEIPQEAADIINKGKAEGRRIISVGTTSTRALESSVDENGKVIAQKASTDIFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ +D L++NFHLPKSTLLMLVSAF E +Y+ A+ Y F+S+GD ++
Sbjct: 288 EFKVIDALITNFHLPKSTLLMLVSAFSSREFMLSVYETAVKEKYHFFSFGDAMFIY 343
>gi|163736612|ref|ZP_02144031.1| Queuosine biosynthesis protein [Phaeobacter gallaeciensis BS107]
gi|161390482|gb|EDQ14832.1| Queuosine biosynthesis protein [Phaeobacter gallaeciensis BS107]
Length = 356
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 162/360 (45%), Positives = 224/360 (62%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA RP PR SARL+V + I D V++L +L S D +V
Sbjct: 1 MKLSDFDFDLPDDRIATRPAVPRSSARLLVAEGDR-----IRDARVANLGQWLRSGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R ++ TL + SW+ +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGPMAAKVEVTLLDPGADGSWAALLKPLKKVKLGEEIIFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ +++ G+ L F++SG + + ++ G +PLPPYIA KRP D +D
Sbjct: 116 D------TLSATLERIEDGQGHLKFNLSGTDFDAALAEAGAMPLPPYIAAKRPADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDDALLAELQAKGVEISYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 RMHAEWGRVSAEAATEIAATKAAGGRVIPVGTTALRLIESA-GQSGAIQPWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFTFHVADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALAEEYRFFSYGDASLLIP 348
>gi|81301157|ref|YP_401365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus elongatus PCC 7942]
gi|123556309|sp|Q31KP1|QUEA_SYNE7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81170038|gb|ABB58378.1| S-adenosylmethionine [Synechococcus elongatus PCC 7942]
Length = 359
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 190/358 (53%), Gaps = 14/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D++LPP RIA V PRD ARL+V + DLP L D ++
Sbjct: 10 HLDAYDYELPPDRIAQSAVEPRDHARLLVFP----DREQLWHRHFYDLPQLLRPGDLLIV 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L P W +P K +K G + F
Sbjct: 66 NDTRVIPARLYGQKI----ETGVPVEVLLVEEHGPGYWLTLVKPGKRLKPGSAIAFGPNP 121
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V TG L F Q++ +G +PLPPYI A D Y
Sbjct: 122 EDPLLVADVEASDPATGGRWLRFRGEAEAFWSQLATLGEMPLPPYIHTT----ASDPERY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHFT LL+ L +GI VTLHVG GTF V VED H M
Sbjct: 178 QTVYSRELGAVAAPTAGLHFTPELLTTLADMGIATAPVTLHVGIGTFRSVDVEDIRQHEM 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T + + + K+ GGR+++VGTTS+R +E A G + P S N+FI PG
Sbjct: 238 HSERMMVPAATVEKIQATKAAGGRVIAVGTTSVRAIEGAAAS-GELKPGSDRVNLFIYPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YR++ +D L++NFHLP+S+L+MLVSA G + Y AI+ YRFYS+GD L+
Sbjct: 297 YRWQIIDGLITNFHLPRSSLMMLVSALIGRDRLLSAYATAIAEQYRFYSFGDAMLILP 354
>gi|254428367|ref|ZP_05042074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alcanivorax
sp. DG881]
gi|196194536|gb|EDX89495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alcanivorax
sp. DG881]
Length = 363
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 198/358 (55%), Gaps = 22/358 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
V +FDF+LP IA P R ARL+ + + + DL + ++ D ++F
Sbjct: 7 NVDDFDFELPDGLIARHPPAERRDARLLALTRD-----ALLHQQFPDLLSHVHPGDLLIF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + ++ + V + + R SK K G L F
Sbjct: 62 NDTRVIPARLFGQKES-----GGKVEVLIERVVDDHEALAHVRASKSPKPGSWLEF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISG---IELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V + + +L FS+ G L + +G +PLPPYI RP + D
Sbjct: 113 -DEGIRAQVTGRRDA-LFILQFSLPGQGCDTLLTALEKIGHVPLPPYI--DRPDEDGDME 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF +L+ L G+ + FVTLHVGAGTF PV+V+ +DH
Sbjct: 169 RYQTVYAREPGAVAAPTAGLHFDDAMLAALEQHGVDIGFVTLHVGAGTFQPVRVDKVEDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I + + +RGGR+V+VGTT+LR LE A+ G+ G T+IFI
Sbjct: 229 HMHSERYQIPDSLVEQVAQAHARGGRVVAVGTTALRALEAASQSGGL-QTGQGETDIFIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRFR VD L++NFHLPKSTLLML+SAF G + YQ AI YRF+SYGD +
Sbjct: 288 PGYRFRLVDALVTNFHLPKSTLLMLISAFAGRDRVMNAYQAAIESQYRFFSYGDAMFI 345
>gi|150024349|ref|YP_001295175.1| S-adenosylmethionine:tRNA-ribosyltransferase-iso merase
[Flavobacterium psychrophilum JIP02/86]
gi|166216722|sp|A6GW82|QUEA_FLAPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149770890|emb|CAL42355.1| S-adenosylmethionine:tRNA-ribosyltransferase-iso merase
[Flavobacterium psychrophilum JIP02/86]
Length = 349
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 195/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +A P RD +RLMVV+ I + D+ + + D +V
Sbjct: 1 MKLSHFQFNLPDELLAEYPAENRDESRLMVVNRAKGT---IEHKMFKDVLDYFDEGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E +++ +G P+P YI R + D
Sbjct: 114 DDDS---LVAEVIDNTTSRGRTLRFLYDGSYEEFRNKLTELGETPIPKYI--SREVTPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI+ VTLHVG GTF PV+VED
Sbjct: 169 AERYQTIYAKEEGAVAAPTAGLHFSKHLMKRLEIKGIQFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +N+ K R RI +VGTTS+R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEELKITQEACDIVNAAKERKSRICAVGTTSMRAIESSVSSARTLNPYDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P + F +++NFH PKSTL+M++SAFCG + K+ Y AI Y+FYSYGD L+
Sbjct: 289 IFPPHDFSLATCMITNFHTPKSTLMMMISAFCGHDLMKEAYAEAIKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|160896458|ref|YP_001562040.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Delftia
acidovorans SPH-1]
gi|160362042|gb|ABX33655.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Delftia
acidovorans SPH-1]
Length = 388
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 142/366 (38%), Positives = 197/366 (53%), Gaps = 21/366 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP + IA P R ++RL+ +D + +LP L D +VFN
Sbjct: 32 LSDFDFELPENLIAQHPAAQRSASRLL---DGRDDATPPTDRIFHELPDLLQPGDLLVFN 88
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + + + + N + R SK G +H
Sbjct: 89 DTRVLKARIFGEKAS-----GGRLELLVERVLEGNDVVAHMRVSKKPLPGSRIHLCGGKN 143
Query: 123 QSRLEATVIDKWNTGEILLVFS----ISGIELERQISLVGTIPLPPYIARK-----RPID 173
+ +A + +W L G + G +PLPPYI R P
Sbjct: 144 RGGFDAVLRGRWPDENGPLFHLSFEGPRGETPHELMERFGHLPLPPYIERHQDTGNDPDA 203
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT +A G+VAAPTA LHF +L+RL GI+ VTLHVGAGTF PVK E
Sbjct: 204 AEDSERYQTVFAARPGAVAAPTAALHFDDAVLARLAERGIERASVTLHVGAGTFQPVKTE 263
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ DH MHSE I T AL + RGGR+V+VGTT++R LE+ +SG T
Sbjct: 264 NLADHQMHSEWYEIPLATLAALERCRQRGGRVVAVGTTTVRTLESWAQTG----QFSGDT 319
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPG+ ++ VD+L++NFHLPKSTL+MLVSAF G E+ +Y+HAI+ YRF+SYGD+
Sbjct: 320 RIFITPGFEYQVVDLLITNFHLPKSTLMMLVSAFAGYEQVMALYRHAIAQEYRFFSYGDS 379
Query: 354 SLLFQK 359
LL +K
Sbjct: 380 MLLKKK 385
>gi|204926792|ref|ZP_03217994.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|204323457|gb|EDZ08652.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
Length = 354
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNLGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|255994149|ref|ZP_05427284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saphenum ATCC 49989]
gi|255993817|gb|EEU03906.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saphenum ATCC 49989]
Length = 365
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 150/367 (40%), Positives = 200/367 (54%), Gaps = 18/367 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+F++DLPP +IA PV RD ++LMVV IS D+ +LN D +V
Sbjct: 6 KTDDFNYDLPPQKIASYPVSKRDESKLMVVKRRSFESPEISHAKFLDIIDYLNEGDCLVI 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N TKVI A+ G + I L + N + +P+K + +G I+ +D
Sbjct: 66 NQTKVIKARFIGFKD-----TGARIEVLLLKPLGENLFEAMIKPAKRVSEGTIISVLPKD 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++ + + +I+ I + I G IPLPPYI R + D YQ
Sbjct: 121 DETGEPLKIQVVKSDDDIIKQVRILNADSLDYIEEFGKIPLPPYIE--REAELSDEKRYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+KI+GSVAAPTAGLHFT L+S++ + GIKV + LHVG GTF PV +D DHIMH
Sbjct: 179 TVYSKIKGSVAAPTAGLHFTEELISKIQNKGIKVARILLHVGVGTFRPVNCDDISDHIMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-------TTEDGII----NPWS 290
SE I A +NS K+ GGR++ VGTTS+R LE A + G S
Sbjct: 239 SEYFEIPEEAADIINSTKNSGGRVICVGTTSVRTLEGAKCIQNASSDASGHKTSDLKVCS 298
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G TNIFI PGY F+ D +++NFHLPKSTLLMLVSAF G++ T Y A+ YRF+SY
Sbjct: 299 GETNIFIYPGYEFKLTDGIITNFHLPKSTLLMLVSAFLGLDNTLNAYDIALKSDYRFFSY 358
Query: 351 GDTSLLF 357
GD L+
Sbjct: 359 GDAMLII 365
>gi|86749987|ref|YP_486483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris HaA2]
gi|86573015|gb|ABD07572.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris HaA2]
Length = 384
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 189/362 (52%), Positives = 243/362 (67%), Gaps = 9/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRP+ PRD+AR++VV P + D +V DLPA L D +V
Sbjct: 27 MRTDLFDFDLPAENIALRPMSPRDAARMLVVRPGAAP----EDRVVRDLPALLQPGDQLV 82
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL+G R E +I TL R+ + W +P+K + +GD++ F
Sbjct: 83 VNDTRVIAAQLSGRRI--GRATEPKIEATLIKRLDGSRWQALVKPAKKLAEGDVVRFGHD 140
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K GE+ L F G L++ I+ +G PLPPYIA KR D RD
Sbjct: 141 GRVCLLGHLDATVEVKGEAGEVTLAFCFHGPALDQAIAELGATPLPPYIASKRAPDDRDA 200
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT L + L + G+ V+ VTLHVGAGTF+PVK +DT +
Sbjct: 201 ADYQTMFAANEGAVAAPTAGLHFTPELDAALAARGVTVHRVTLHVGAGTFLPVKTDDTAE 260
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G I TA ALN+ +++GGRIV+VGTTSLRLLE+A +DG I P++ T IFI
Sbjct: 261 HRMHAEWGTIGRDTAAALNAARAQGGRIVAVGTTSLRLLESAARDDGTIAPFADETAIFI 320
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+FRAVD+LM+NFHLP+STL MLVSAFCG+E + Y+HAI YRFYSYGD SLLF
Sbjct: 321 TPGYKFRAVDVLMTNFHLPRSTLFMLVSAFCGLETMQAAYRHAIETGYRFYSYGDASLLF 380
Query: 358 QK 359
++
Sbjct: 381 RE 382
>gi|313888442|ref|ZP_07822109.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845471|gb|EFR32865.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 339
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 202/356 (56%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F +DLP IA P RD +RL+V+ + D+ +L D +V
Sbjct: 1 MKTKDFYYDLPKELIAQHPEEKRDHSRLLVLDKESG---EMEHKHFYDIIDYLKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A++ G R +E++I L R + W ++P K K G + F
Sbjct: 58 LNDTKVMPARIYGHR----EGKEEKIEFLLLNRK-DDIWECLSKPGKKAKIGSKIIFSD- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L A V+D G L F GI E + +G +PLPPYI K Y
Sbjct: 112 ----KLSAEVVDISEDGSRFLKFEYDGI-FEEILDELGEMPLPPYITEKLED----KNRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL +L G+++ ++TLHVG GTF PVKVE+ D+H M
Sbjct: 163 QTVYAREEGSAAAPTAGLHFTKELLEKLKDKGVEICYITLHVGLGTFRPVKVENVDEHEM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ K RG R+++VGTTS+R +E+ EDG + SGFTNIFI P
Sbjct: 223 HSEFYVMTKEVADKINAAKDRGSRVIAVGTTSVRTVESIANEDGRVCEKSGFTNIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVS+ E K Y+ A+ YRF+S+GD +
Sbjct: 283 YKFKCVDALITNFHLPESTLLMLVSSLSSREIILKAYEEAVKERYRFFSFGDAMFI 338
>gi|260773399|ref|ZP_05882315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
metschnikovii CIP 69.14]
gi|260612538|gb|EEX37741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
metschnikovii CIP 69.14]
Length = 350
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 137/364 (37%), Positives = 203/364 (55%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R +RL+ ++ + D +D+ ++ D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPKAQRTDSRLLRLNGTTGERV---DGTFTDVLHYIEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + +S + R SK K G L+ Q
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERMLDEHSILAHVRCSKPPKPGTELYLGEQ 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D D + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 DQYLATMVARHDALFE-----IRFNAQQTVLEILNHIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLDQIQAKGVEFAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T+IF
Sbjct: 226 HAEYVEVPEEVVAAIAATKARGGRVIAVGTTSVRSLESAAQDALAKGTALAPFFGDTDIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ +D L++NFHLP+STL+MLVSAF G E T YQHA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLIDALITNFHLPESTLIMLVSAFAGYEHTMAAYQHAVEQKYRFFSYGDAMFI 345
Query: 357 FQKR 360
+ +
Sbjct: 346 EKNQ 349
>gi|8037781|gb|AAF71490.1|AF232005_1 QueA [Pseudomonas syringae pv. syringae]
Length = 354
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 198/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
F NT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FTNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLERVGRMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + +SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKSFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|190150095|ref|YP_001968620.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|307256789|ref|ZP_07538568.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|307261247|ref|ZP_07542922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|307263429|ref|ZP_07545045.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
gi|238692337|sp|B3GXL9|QUEA_ACTP7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189915226|gb|ACE61478.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|306864837|gb|EFM96741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|306868978|gb|EFN00780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|306871307|gb|EFN03035.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
Length = 361
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 134/362 (37%), Positives = 194/362 (53%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + + + + G +PLPPYI RP + D Y
Sbjct: 113 KLGEGNGFKAIMTARHDALFELHFNEEQPVFDLLQQAGHMPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+IF
Sbjct: 231 HAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTSIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD +
Sbjct: 291 LYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAMFI 350
Query: 357 FQ 358
+
Sbjct: 351 NK 352
>gi|94267972|ref|ZP_01291047.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
gi|93451777|gb|EAT02535.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
Length = 370
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 134/368 (36%), Positives = 194/368 (52%), Gaps = 19/368 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LPP IA +P RD++RL+V ++D +L L+ D +VFN
Sbjct: 11 LSDYDYHLPPELIAQQPAARRDASRLLVCDCRDGG---LADRHFPELLDLLSPGDLLVFN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTL----------HMRVSPNSWSVYARPSKVIKKG 112
+T+V A+L G + + + S + SK +K+G
Sbjct: 68 DTRVFPARLLGHKSSGGRGELLLLEYPVAQAAADVGSAEGGESSFHAWALCKTSKGVKEG 127
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRP 171
L F L+A V++ G + ++ G L+ ++ G +PLPPYI R
Sbjct: 128 LKLLFGDD-----LQAEVVELGEGGRARVRLQVAAGQTLDGCLARHGRMPLPPYIRRSET 182
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D YQT YA + G+VAAPTAGLHFT LL+ + + G++ VTLHVG GTF PV+
Sbjct: 183 ETPEDRQRYQTVYAAVTGAVAAPTAGLHFTPELLAAIAAKGVRQARVTLHVGYGTFSPVR 242
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
V D +H +H E I A + ++ GGRI +VGTT++R LETA G + P SG
Sbjct: 243 VRDIREHAIHGEYYAITPENAALVEQTRAAGGRIWAVGTTAVRALETAADAAGRLTPGSG 302
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
++I PGYRF+ VD L++NFHLP+S+LL LVSA G Y HA++ YRF+SYG
Sbjct: 303 ICELYIYPGYRFKVVDNLLTNFHLPRSSLLFLVSALAGRRRILAAYNHAVARGYRFFSYG 362
Query: 352 DTSLLFQK 359
D + K
Sbjct: 363 DAMAIINK 370
>gi|220907192|ref|YP_002482503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 7425]
gi|219863803|gb|ACL44142.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7425]
Length = 381
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 197/357 (55%), Gaps = 16/357 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LP + IA PV PRD +RL+VV C L DLP L S D +V N
Sbjct: 27 LSSYDYLLPDALIAQAPVVPRDCSRLLVVQQEDHC-----HRLFQDLPQLLRSGDLLVMN 81
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+VI A+L G + + E E L W +P + +K G + F G
Sbjct: 82 NTRVIPARLIGSKLGGQSPLEVEA--LLLEEKDDRHWLALVKPGRRLKPGSQIQF----G 135
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ID G IL G LE++++ +G IPLPPYI YQT
Sbjct: 136 DLQATVLEIDPATRGRILAFDLAEGERLEQRLADLGKIPLPPYIK----DSPAAPEQYQT 191
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y G+VAAPTAGLHFT LL +L + GI F+TLHVG GTF PV+ + DH MH
Sbjct: 192 VYNDRPGAVAAPTAGLHFTPELLDKLATQGIDHCFLTLHVGVGTFRPVEADHIQDHTMHQ 251
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T + + ++ GGRI++VGTT +R LE A E G + P+ G TN+FI PGY+
Sbjct: 252 EWLEIPPETVEKIQQTQAAGGRIIAVGTTVVRALEGAAQE-GSLKPFRGKTNLFIYPGYQ 310
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+R V+ L++NFHLPKS+L+MLVSA G + +YQ AI+ YRFYS+GD L+ +
Sbjct: 311 WRVVEGLITNFHLPKSSLMMLVSALIGRQRLLDLYQAAIAAQYRFYSFGDAMLILPE 367
>gi|257062151|ref|YP_003140039.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 8802]
gi|256592317|gb|ACV03204.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 8802]
Length = 372
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 139/370 (37%), Positives = 200/370 (54%), Gaps = 25/370 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP IA PV PRDS+RL+V++ + + +LP +L S D +V
Sbjct: 6 LLASYDYHLPAELIAQSPVTPRDSSRLLVLNSLTTQV----HSVFRELPQWLRSGDLLVL 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L +P SW +P K K+G + F
Sbjct: 62 NNTRVIPARLYGQK-----TTGAPVEILLLEEKTPLSWLALVKPGKRFKRGSQIWFPHPP 116
Query: 122 GQS-------RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
++ + +D G +L + S I +G IPLPPY+
Sbjct: 117 DETTESSVYLKTTVIDVDPETGGRLLQFEAASVEAFWSAIEELGKIPLPPYVTS----SE 172
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA+ G+VAAPTAGLHFT +LL RL + GI+ ++TLHVG GTF PV+V D
Sbjct: 173 AQPGQYQTVYAQKPGAVAAPTAGLHFTPDLLQRLQAQGIQQSYITLHVGVGTFRPVEVGD 232
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PW 289
H MHSE + + T +A+ K+RGGR+++VGTT +R LE P+
Sbjct: 233 ITQHQMHSEWLEVPSSTVEAIAETKARGGRVIAVGTTVVRSLEGVAQIAKAEGKSGLIPF 292
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T++FI PGY ++ V+ +++NFHLP+S+LLMLVSA G E +YQ AI YRFYS
Sbjct: 293 RGRTDLFIYPGYSWQVVEGMITNFHLPRSSLLMLVSALIGRERLMSVYQTAIDEKYRFYS 352
Query: 350 YGDTSLLFQK 359
+GD L+ +
Sbjct: 353 FGDGMLILPE 362
>gi|84387606|ref|ZP_00990623.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus 12B01]
gi|84377451|gb|EAP94317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus 12B01]
Length = 350
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 200/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNSGN---LADGSFKDVLDLVEPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGSKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D EA ++ + + + S + ++ VG +PLPPYI RP + D Y
Sbjct: 113 D---EYEAEMVAR--HDALFEIHFTSDQSVLEILNSVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ + G++ +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDKLMAGMKEKGVEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAAAKARGGRIIAVGTTSVRSLESAAQDALRNGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 NKK 348
>gi|115524776|ref|YP_781687.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisA53]
gi|122296024|sp|Q07MX7|QUEA_RHOP5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115518723|gb|ABJ06707.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisA53]
Length = 358
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 185/361 (51%), Positives = 239/361 (66%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRP PRD+AR++VV + D +VS+LP +L DA+V
Sbjct: 1 MRTDLFDFDLPQGAIALRPASPRDAARMLVVE----ASGALHDRVVSELPEWLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL G R E +I TL R+ + W +P+K + GDI+ F
Sbjct: 57 VNDTKVIAAQLTGRRI--GRDTEPKIDATLIKRLDGSRWQALVKPAKKLLPGDIVRFGHD 114
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+L+ATV K GEI+L F++ G L++ I+ +G PLPPYIA KR D RD
Sbjct: 115 GRVCLLGQLDATVEAKGEAGEIILAFTLHGPVLDQAIAELGAPPLPPYIASKRAPDDRDA 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT L L + G+ ++ VTLHVGAGTF+PVK EDT +
Sbjct: 175 ADYQTMFAANEGAVAAPTAGLHFTKALEQALAARGVTLHRVTLHVGAGTFLPVKTEDTAE 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + TA ALN+ ++ GRIV+VGTTSLRLLE+A +DG + P++ T IFI
Sbjct: 235 HKMHAEWGCLSRETADALNAARAADGRIVAVGTTSLRLLESAAGDDGRLAPFADDTAIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRF+AVD+LM+NFHLP+STL MLVSAF G++ ++ Y HAI YRFYSYGD LLF
Sbjct: 295 TPGYRFKAVDVLMTNFHLPRSTLFMLVSAFAGLDTMQRAYAHAIKSGYRFYSYGDACLLF 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|32034120|ref|ZP_00134352.1| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase) [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208243|ref|YP_001053468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae L20]
gi|166216694|sp|A3N0C7|QUEA_ACTP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126097035|gb|ABN73863.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 5b str. L20]
Length = 361
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 135/362 (37%), Positives = 194/362 (53%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEILVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + + L + G +PLPPYI RP + D Y
Sbjct: 113 KLGEGNGFKAIMTARHDALFELHFNEEQPLFDLLQQAGHMPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+IF
Sbjct: 231 HAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLITPFFSDTSIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD +
Sbjct: 291 LYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAMFI 350
Query: 357 FQ 358
+
Sbjct: 351 NK 352
>gi|288574883|ref|ZP_06393240.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570624|gb|EFC92181.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 344
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 137/356 (38%), Positives = 196/356 (55%), Gaps = 18/356 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
V +D+ LP IA P PRDS+RLMV+ + + SDL +L S+D ++
Sbjct: 7 KVSSYDYRLPKELIAQNPADPRDSSRLMVLSREDGS---LEHRVFSDLVDYLRSDDVLIR 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G + E E+ + R+S +W RP + +K G +
Sbjct: 64 NDTRVMAARLKGKKVEG----EAEVEILVLSRLSGQTWEAMVRPGRRLKPGISVLLSDG- 118
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+D + V G+++ + VGT+PLPPYI YQ
Sbjct: 119 -----TTVKVDGIRPEGLRSVTFPEGVDVLSLLDKVGTVPLPPYITDSNA----SPEAYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A GS AAPTAGLHFT L+ R+ G+++ VTL VG GTF PVK ED H MH
Sbjct: 170 TVFANKVGSAAAPTAGLHFTPELIERIEKKGVEILDVTLQVGLGTFRPVKEEDLRHHPMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I + TA +N K++G RIV+VGTTS+R LE+ + G++ T++FI PG+
Sbjct: 230 RERCQISSYTADRINKAKAQGRRIVAVGTTSVRTLES-MGDSGVLLSGERDTSLFIYPGF 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD +++NFHLP+STLLMLVSAF G E T Y+ A+S YRF+S+GD ++
Sbjct: 289 EFKIVDAMITNFHLPQSTLLMLVSAFAGRERTLNAYKEAVSMEYRFFSFGDAMFIY 344
>gi|218708620|ref|YP_002416241.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus LGP32]
gi|254764290|sp|B7VJR7|QUEA_VIBSL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218321639|emb|CAV17591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus LGP32]
Length = 350
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 202/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNNGN---LADGSFKDVLDLVEPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D EA ++ + + + S + ++ VG +PLPPYI RP + D Y
Sbjct: 113 D---EYEAEMVAR--HDALFEIHFTSDQSVLEILNSVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ + G++ +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDKLMADMKEKGVEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGII-NPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A ++G P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAAAKARGGRIIAVGTTSVRSLESAAQDAVKNGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 NKK 348
>gi|15837915|ref|NP_298603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa 9a5c]
gi|21263924|sp|Q9PDR5|QUEA_XYLFA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|9106307|gb|AAF84123.1|AE003964_7 S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Xylella
fastidiosa 9a5c]
Length = 347
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 144/359 (40%), Positives = 203/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RLM+V S P D V DLP L D +V
Sbjct: 2 LKKSDFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + + V R S+ +K G+ + +
Sbjct: 59 FNDTRVIPARLFGRKVS-----GGRVEILIERFLGTHQAVVQLRTSRSLKVGNRILLDAG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L G+ L+ LE+ +S VG +PLPPYI R D D Y
Sbjct: 114 GHAGVL-------GRDGDFYLLSFDVESPLEQWLSDVGQLPLPPYI--HREPDEYDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V H+M
Sbjct: 165 QTVFARAVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQQHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PG
Sbjct: 225 HSEWFKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y R+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 284 YCIRSVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|300776948|ref|ZP_07086806.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chryseobacterium gleum ATCC 35910]
gi|300502458|gb|EFK33598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chryseobacterium gleum ATCC 35910]
Length = 349
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 136/361 (37%), Positives = 194/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP +A P RD ARLMV+ I L D+ + + D +
Sbjct: 1 MKTSDFNFDLPAELLAEHPSEHRDEARLMVLDRKTQT---IEHKLFKDVVDYFDEEDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + +I L + W V P++ I+ G+ L F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGAKIEVFLLRELDKETRVWDVLVDPARKIRIGNKLFFT 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++ +G PLP YI R ++ D
Sbjct: 114 EDES---LVAEVIDNTTSRGRTLRFLFDGSYEEFRSKLKELGETPLPKYIK--RAVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK++G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF P++VED
Sbjct: 169 AERYQTIYAKVEGAVAAPTAGLHFSKHLMKRLEIKGINFAEVTLHVGLGTFNPIEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID A +N R+ +VGTT++R LET+ + + I+ ++G+TN F
Sbjct: 229 KHKMESEEIIIDEKNAAIINKAVEAHRRVCAVGTTTMRALETSVSSNKKISAFNGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P + F + +++NFH PKSTL+M+++AF G + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IYPPHEFGVANSMITNFHTPKSTLIMMIAAFAGRDFVMHAYEEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|22298465|ref|NP_681712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermosynechococcus elongatus BP-1]
gi|46577048|sp|Q8DKD7|QUEA_THEEB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|22294645|dbj|BAC08474.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermosynechococcus elongatus BP-1]
Length = 354
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 137/356 (38%), Positives = 197/356 (55%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LPP RIA +PV PRD +RLMVV + + DH +LP L D +V N
Sbjct: 9 LDAYDYQLPPERIAQQPVSPRDRSRLMVVTRDTAA-----DHYFYELPQLLAPGDLLVLN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + R + L +S W +P + ++ G ++
Sbjct: 64 DTRVIPARLIGQKVGAAGRT---VEVFLLEELSDRQWLALVKPGRKLRPGAVIQIGPLQA 120
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
ID+ G ++ G L + +G +PLPPYI YQT
Sbjct: 121 ----TVQTIDEETRGRVIEFDLPPGDRLWSYLDHLGEVPLPPYIDHPLADT----EQYQT 172
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHFT L S+L GI F+TLHVG GTF PV+ +D H +H
Sbjct: 173 VYARRPGAVAAPTAGLHFTPELFSKLADRGIDHCFLTLHVGIGTFRPVEAKDIRHHHLHE 232
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A T + + + K+ GGRI++VGTT +R LETA G + P+ G ++++I PGY+
Sbjct: 233 EWLEVSAATVERIQAAKAAGGRIIAVGTTVIRALETAA-HSGTLQPFCGKSDLYIYPGYQ 291
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ V+ ++NFHLP+S+L+MLVSAF G E ++YQ AI YRFYS+GD L+
Sbjct: 292 PKIVEGFITNFHLPRSSLMMLVSAFIGRERLLQLYQQAIDRQYRFYSFGDAMLILP 347
>gi|218249064|ref|YP_002374435.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 8801]
gi|218169542|gb|ACK68279.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 8801]
Length = 372
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 147/370 (39%), Positives = 206/370 (55%), Gaps = 25/370 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP IA PV PRDS+RL+V++ + + +LP +L S D +V
Sbjct: 6 LLASYDYHLPAELIAQSPVTPRDSSRLLVLNSLTTQV----HSVFRELPQWLRSGDLLVL 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L +P SW +P K K+G + F
Sbjct: 62 NNTRVIPARLYGQK-----TTGAPVEILLLEEKAPLSWLALVKPGKRFKRGSQIWFPHSP 116
Query: 122 GQSR-----LEATVID-KWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDA 174
++ L+ATVID TG LL F +E I +G IPLPPY+
Sbjct: 117 DETTESSVYLKATVIDVDPETGGRLLQFEADSVEAFWSAIEELGKIPLPPYVTS----SE 172
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA+ G+VAAPTAGLHFT +LL RL + GI+ ++TLHVG GTF PV+V D
Sbjct: 173 AQPGQYQTVYAQKPGAVAAPTAGLHFTPDLLQRLQAQGIQQSYITLHVGVGTFRPVEVGD 232
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PW 289
H MHSE + + T +A+ K+RGGR+++VGTT +R LE P+
Sbjct: 233 ITQHQMHSEWLEVPSSTVEAIAETKARGGRVIAVGTTVVRSLEGVAQIAKAEGKSGLIPF 292
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T++FI PGY ++ V+ +++NFHLP+S+LLMLVSA G E +YQ AI YRFYS
Sbjct: 293 RGRTDLFIYPGYSWQVVEGMITNFHLPRSSLLMLVSALIGRERLMSVYQTAIDEKYRFYS 352
Query: 350 YGDTSLLFQK 359
+GD L+ +
Sbjct: 353 FGDGMLILPE 362
>gi|15606227|ref|NP_213605.1| queuosine biosynthesis protein [Aquifex aeolicus VF5]
gi|3914538|sp|O67043|QUEA_AQUAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|2983418|gb|AAC07001.1| queuosine biosynthesis protein [Aquifex aeolicus VF5]
Length = 334
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 138/357 (38%), Positives = 193/357 (54%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD++LP IA P PR SARLMV++ I +LP +L D +V
Sbjct: 1 MRIEEFDYELPEELIAKYPAVPRHSARLMVLNRKDQS---IKHDTFINLPDYLEEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + + L + P+ W K I+ G ++
Sbjct: 58 FNNTKVIPARLYGRK-----PTGGRVEVVLTDFIKPDEWKALI-GGKKIRPGLVIEVAPD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LE K + G E + I G IP+PPY+ R + D V Y
Sbjct: 112 FKVEVLEHIEEGK-------FRVKLLGEEPLKLIDKYGHIPIPPYLK--REEEPIDRVYY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +G+VA+PTA LHF+ LL +L GI F+TLHV GTF PVKVE ++H +
Sbjct: 163 QTIFAKEKGAVASPTASLHFSEELLEKLKEKGINFAFITLHVSYGTFKPVKVERVEEHRV 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E I T + + K +G R+V+VGTT +R LET P+ G+T+++I PG
Sbjct: 223 DPEYVKIPKETVEKIKETKEKGKRVVAVGTTVVRALET-----KPFEPFEGWTDLYIYPG 277
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++F+ VD +++NFHLP+S+LL+LVSAF G E K Y+ A+ YRFYSYGD L+
Sbjct: 278 FKFKVVDAMITNFHLPRSSLLILVSAFAGREFILKAYREAVEKRYRFYSYGDGMLIL 334
>gi|270308109|ref|YP_003330167.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Dehalococcoides sp. VS]
gi|270154001|gb|ACZ61839.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Dehalococcoides sp. VS]
Length = 343
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 204/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA +P PRDS+RL+V++ ++ + ++ + D +V
Sbjct: 1 MKTSDFDYKLPQEYIAQKPAEPRDSSRLLVLNRQRG---ELTSRIFGEITEYFKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ G++ +I L R N W +P K K G I+
Sbjct: 58 MNNSRVLPARIKGIK----RDTAAKIEILLLKRDGDNCWEALLKPGKRTKPGTIIDIHQH 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ +A V+ + G LL FS + +G +PLPPYI + Y
Sbjct: 114 GEETSTQAEVLADKDDGIKLLRFSDE-----THLMKLGEVPLPPYIHTP----VSNPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT++LL RL IG+ +VTLH+G TF PVK ED DHI+
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTTDLLKRLSEIGVICTYVTLHIGLDTFRPVKEEDPKDHII 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H E G + A TA A+ K+ G R+ VGT++ RL+E A++ ++GII P+S + ++FI
Sbjct: 225 HREYGILSAETAAAICQAKANGKRVFCVGTSATRLVEQASSLSQNGIIEPYSDWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+FR VD ++NFHLP+ST LML +AF G KK Y+ AI YRFYS+GD L+
Sbjct: 285 PGYKFRVVDCFITNFHLPRSTPLMLTAAFAGWPFLKKAYEKAIHEHYRFYSFGDAMLVL 343
>gi|261491895|ref|ZP_05988473.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494438|ref|ZP_05990925.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309923|gb|EEY11139.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261312442|gb|EEY13567.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 361
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 133/364 (36%), Positives = 203/364 (55%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP IA P R ++RL+ ++ +D DL +N D ++
Sbjct: 1 MLVSDFHFNLPDELIARYPTAERSASRLLHLNGETG---EFADQQFVDLYDHINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K+G L F
Sbjct: 58 FNNTRVIPARLYGRKPS-----GGKVEALVERVLDEHCCLAHVKASKAPKEGAELIFGED 112
Query: 121 D-GQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G+ + AT++ + +T L+ L + G +PLPPYI RP + D
Sbjct: 113 KLGEGKGFTATMVARHDTLFELVFNEDQP--LFELLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + +L +L + G+ FVTLHVGAGTF PV+VE +DH
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNAMLEKLKAKGVDTAFVTLHVGAGTFQPVRVETIEDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K++G R++++GTTS+R +E+A + +I P+ T
Sbjct: 229 KMHAEYAEVSQEVVDKILATKAKGKRVIAIGTTSVRSVESAAQAAEKDGKLIAPFFSDTA 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG F+ +D L++NFHLP+STL+MLVSAF G T Y HA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFKVIDALVTNFHLPESTLIMLVSAFAGYRNTMNAYAHAVETKYRFFSYGDAM 348
Query: 355 LLFQ 358
+ +
Sbjct: 349 FINK 352
>gi|257452581|ref|ZP_05617880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_5R]
gi|257466440|ref|ZP_05630751.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium gonidiaformans ATCC 25563]
gi|315917596|ref|ZP_07913836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium gonidiaformans ATCC 25563]
gi|317059121|ref|ZP_07923606.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_5R]
gi|313684797|gb|EFS21632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_5R]
gi|313691471|gb|EFS28306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium gonidiaformans ATCC 25563]
Length = 343
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D+ LP I P PRD A+L++V+ + I D D+ +L D +V
Sbjct: 4 KLHDYDYHLPEELIGQTPREPRDHAKLLLVNRDTKT---IEDKYFYDILDYLQKGDVLVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + L R ++W +P+K +K G ++
Sbjct: 61 NSTKVIPARLYGQKE-----TGGILEVLLVKRKDLDTWECLLKPAKKLKLGQKIYIGP-- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
S L A +++ G +L FS G E + +GT+PLPPYI K YQ
Sbjct: 114 -NSELVAELLEIQEDGNRILKFSYEG-SFEENLDRLGTMPLPPYIVEKLEDQEM----YQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ ED DH MH
Sbjct: 168 TVYAKRGESVAAPTAGLHFTEELLQKIQEKGIEIVDIYLEVGLGTFRPVQTEDVLDHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E+ I AQ +N K+ G RI+SVGTT+ R LE++ E+GI+ T IFI PGY
Sbjct: 228 EELFEIPEEAAQKINQAKAEGRRIISVGTTTTRALESSVDENGILLAQKKNTGIFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F+ VD L++NFHLPKSTLLMLVSAF E ++YQHA+ Y F+S+GD ++
Sbjct: 288 QFQIVDALITNFHLPKSTLLMLVSAFSEREFILEIYQHAVEEKYHFFSFGDAMFIY 343
>gi|91215705|ref|ZP_01252675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychroflexus torquis ATCC 700755]
gi|91186171|gb|EAS72544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychroflexus torquis ATCC 700755]
Length = 351
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 201/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F++ LP + +A P RD A+LMV++ I + D+ + + D +V
Sbjct: 3 MKLSQFEYTLPENLLAQFPSEHRDEAKLMVINRKDGS---IEHKIFKDVINYFDEKDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + +I L ++P W V P++ I+ G+ L+F
Sbjct: 60 FNNTKVFPARLYGNK----EKTGAKIEVFLLRELNPETRLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID L F G + +++ +G PLP YI R +
Sbjct: 116 EDES---LVAEVIDNTTNRGRTLRFLYDGSYQDFRAKLTELGQTPLPKYITRDVVPEDA- 171
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLH+G GTF PV+VED
Sbjct: 172 -ERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHIGLGTFSPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +D +N+ KS +I +VGTT +R +E+ + + +N ++G+TN F
Sbjct: 231 KHKMDSEQIKVDEKATSIINNAKSEKRKICAVGTTVMRTIESTVSSNRRLNEFTGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + +++NFH+PKSTLLM+VSAF G E +K Y+ AI Y+FYSYGD L+
Sbjct: 291 IFPPYDFKIANCMITNFHMPKSTLLMMVSAFAGHELMEKAYKEAIEENYKFYSYGDAMLI 350
Query: 357 F 357
Sbjct: 351 I 351
>gi|146277887|ref|YP_001168046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides ATCC 17025]
gi|166216745|sp|A4WTM7|QUEA_RHOS5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145556128|gb|ABP70741.1| Queuosine biosynthesis protein [Rhodobacter sphaeroides ATCC 17025]
Length = 346
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 163/358 (45%), Positives = 214/358 (59%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL + D +V
Sbjct: 1 MKLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFHPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R +I TL + W A+P + +K+G+ + F
Sbjct: 56 LNNTRVIPARLVGTRTRGEAC--AKIEITLMEPAAAGGWRALAKPLRKLKEGETIRFSD- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T L+ F +G + + ++ G +PLPPYIA +R DA+D DY
Sbjct: 113 ----ALSAEVAEKGETDLRLV-FDRAGEDFDAALAEAGAMPLPPYIAARRAPDAQDREDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAANGVAFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A+ G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESASA-AGTIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR D LM+NFHLPKSTLLMLVSA G + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGEARIRAIYDHAVRHDYRFFSYGDASLLIP 344
>gi|307249979|ref|ZP_07531951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306858039|gb|EFM90123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
Length = 361
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 134/362 (37%), Positives = 194/362 (53%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + + + + G +PLPPYI RP + D Y
Sbjct: 113 KLGEGNGFKAIMTARHDALFELHFNEERPVFDLLQQAGHMPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+IF
Sbjct: 231 HAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTSIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD +
Sbjct: 291 LYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAMFI 350
Query: 357 FQ 358
+
Sbjct: 351 NK 352
>gi|261822535|ref|YP_003260641.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium wasabiae WPP163]
gi|261606548|gb|ACX89034.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pectobacterium wasabiae WPP163]
Length = 355
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 198/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQAERSGCRLLSLDGPTGN---LTHGVFTDLLEKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDRRVLAHVRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A D + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ESVKATMAARHDALFE-----LHFDDARDVLSILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A ++D I P+ T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQDAPIAPFFDDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 286 PGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYREAVAEQYRFFSYGDAMFIT 344
>gi|119490207|ref|ZP_01622720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lyngbya sp.
PCC 8106]
gi|119454093|gb|EAW35246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lyngbya sp.
PCC 8106]
Length = 371
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 142/368 (38%), Positives = 198/368 (53%), Gaps = 27/368 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LP RIA PV PRD +RL+V+ + DLP +L S+D +VFNNT+
Sbjct: 13 YDYELPEERIAQNPVVPRDQSRLLVID----SLTSHHHRVFRDLPHWLKSDDLLVFNNTQ 68
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-----FSQ 120
VI A+L G + + L PN W +P K K G + F
Sbjct: 69 VIPARLYGHKSS-----GGSVEILLLEEQKPNCWLALVKPGKYFKPGVKIEFEPLHPAPD 123
Query: 121 DGQSRLEATVID--KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A V+D + G +L + G L Q+ G IP PPY+ + +
Sbjct: 124 SILQPLSAIVVDTDETTGGRLLQFYLPQGQSLIEQLDQFGHIPFPPYVNQSQAF----PQ 179
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHFT L RL GI FVTLHVG GTF PV+V+D H
Sbjct: 180 QYQTIYAQRPGAVAAPTAGLHFTEELFERLHHQGINKAFVTLHVGVGTFRPVEVQDITTH 239
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E + T + + K+ GGR+++VGTT +R LE +G + + G T+ FI
Sbjct: 240 QMHAEWIEVSPETVEQIQKTKANGGRVIAVGTTVVRTLEGVAMAEGKLTSYRGKTDAFIY 299
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA-------YRFYSYG 351
PGY+F+ +D L++NFHLP+S+L+MLV+AF G +YQ AI+ + YRFYS+G
Sbjct: 300 PGYQFQVIDGLITNFHLPRSSLMMLVAAFIGRPRLLDLYQDAIAQSAEGFTHPYRFYSFG 359
Query: 352 DTSLLFQK 359
D L+ +
Sbjct: 360 DGMLILPE 367
>gi|212212409|ref|YP_002303345.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuG_Q212]
gi|226713836|sp|B6IZS2|QUEA_COXB2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|212010819|gb|ACJ18200.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuG_Q212]
Length = 343
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 130/355 (36%), Positives = 189/355 (53%), Gaps = 18/355 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD++LP IA RP+ R +RL+ + + +S + + ND +V
Sbjct: 6 KTSDFDYNLPVELIAQRPLADRSGSRLLYIDRSRRT---VSHRQFNGFVEQVKPNDLVVL 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A L G + + ++ C + +S + + + R SK K G +
Sbjct: 63 NDTKVIPAGLFGHK-----QTGGKVECLVERILSKDRFLAHIRASKAPKLGSQIIIADN- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+I + ++ S + + G IPLPPYI R D D YQ
Sbjct: 117 ------FKIIIEGRYNDLFECVLHSSASILDLLYQHGRIPLPPYIQ--REPDKDDQARYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTAGLHF L G + +VTLHVGAGTF PV+ + DH MH
Sbjct: 169 TIFAERAGAVAAPTAGLHFNEETFDALRKKGAAITYVTLHVGAGTFQPVRADSLADHRMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A+ + GR+++VGTT +R LETA T++G P++G T++FI PG+
Sbjct: 229 HEWMEVSKAVCDAIAKCRKNNGRVIAVGTTVMRCLETA-TKNGECRPYAGETDLFIYPGF 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ VD L++NFHLPKSTLLMLV AF G E + YQ A+ + YRF+SYGD L+
Sbjct: 288 QFKCVDALLTNFHLPKSTLLMLVCAFGGYELVMEAYQKAVENRYRFFSYGDAMLI 342
>gi|161830489|ref|YP_001597061.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 331]
gi|189038518|sp|A9NDS1|QUEA_COXBR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161762356|gb|ABX77998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 331]
Length = 343
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 129/355 (36%), Positives = 188/355 (52%), Gaps = 18/355 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD++LP IA RP+ R +RL+ + + +S + + ND +V
Sbjct: 6 KTSDFDYNLPVELIAQRPLADRSGSRLLYIDRSRRT---VSHRQFNGFVEQVKPNDLVVL 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + ++ C + +S + + + R SK K G +
Sbjct: 63 NDTKVIPARLFGHK-----QTGGKVECLVERILSKDRFLAHIRASKAPKLGSQIIIADN- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+I + ++ S + + G IPLPPYI R D D YQ
Sbjct: 117 ------FKIIIEGRYNDLFECVLHSSASILDLLYQHGRIPLPPYIQ--REPDKDDQARYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTAGLHF L G + +VTLHVGAGTF PV+ + DH MH
Sbjct: 169 TIFAERAGAVAAPTAGLHFNEETFDALRKKGAAITYVTLHVGAGTFQPVRADSLADHRMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A+ + GR+++VGTT +R LETA T++ P++G T++FI PG+
Sbjct: 229 HEWMEVSKAVCDAIAKCRKNNGRVIAVGTTVMRCLETA-TKNSECRPYAGETDLFIYPGF 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F VD L++NFHLPKSTLLMLV AF G E + YQ A+ + YRF+SYGD L+
Sbjct: 288 QFNCVDALLTNFHLPKSTLLMLVCAFGGYELVMEAYQKAVENRYRFFSYGDAMLI 342
>gi|197121715|ref|YP_002133666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaeromyxobacter sp. K]
gi|238689888|sp|B4UID2|QUEA_ANASK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196171564|gb|ACG72537.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter sp. K]
Length = 345
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 152/362 (41%), Positives = 206/362 (56%), Gaps = 20/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPGEGAPA---HRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP---NSWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L G + ++ L + W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS-----GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLTF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V G + G ELE + G IPLPPYI +R DA D
Sbjct: 113 ------DGLEARVDGVEGEGFYRVTLDRQGPELEAALGRAGRIPLPPYI--RRAPDAEDA 164
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A+ GS AAPTAGLHFT LL+RL + GI+ VTLHVG GTF+P++ +D D
Sbjct: 165 ARYQTIWARAPGSAAAPTAGLHFTEPLLARLAARGIRRTAVTLHVGPGTFLPIRGDDLDL 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A+ L + ++RGGRIV+VGTTS+R LE+A DG + G T +FI
Sbjct: 225 HRMHGERYEVSPAAAEELAATRARGGRIVAVGTTSVRTLESAWR-DGAVAAGPGRTELFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ F AVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD L+
Sbjct: 284 RPGHPFHAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLVL 343
Query: 358 QK 359
++
Sbjct: 344 RR 345
>gi|116051849|ref|YP_789308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa UCBPP-PA14]
gi|122260996|sp|Q02RX8|QUEA_PSEAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115587070|gb|ABJ13085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 347
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 198/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQHRVLAHIRASKAPKPGTRILVEGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ L + + VG +PLPPYI RP DA D Y
Sbjct: 113 GSAEMLQ---------RHDALFELAFAEPVLPLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVSACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 338
>gi|148552954|ref|YP_001260536.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas wittichii RW1]
gi|166218743|sp|A5V282|QUEA_SPHWW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148498144|gb|ABQ66398.1| Queuosine biosynthesis protein [Sphingomonas wittichii RW1]
Length = 344
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 188/358 (52%), Positives = 235/358 (65%), Gaps = 15/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSAR+++V + ++D VSDLP L D +V
Sbjct: 1 MRVDLFDFDLPPENIALRPASPRDSARMLLVEGSEGA---LADRHVSDLPGLLRVGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E I TLH R W + R +K ++ GD + F +
Sbjct: 58 FNDTRVIPAQLEGRR------GEARIGATLHKREGLRQWRAFVRNAKRVRTGDRIDFGAG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ G ILL F +E + GT+PLPPYIA KRP D RD DY
Sbjct: 112 -----VSAIAAERGEDGSILLDFE-GDEPVELLLERAGTMPLPPYIAGKRPTDDRDRDDY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT L+ L + GI +TLHVGAGTF+PVK +DTDDH M
Sbjct: 166 QTMFAREKGAVAAPTAALHFTPRLMEALAAAGIASETLTLHVGAGTFLPVKADDTDDHRM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA TA LN++++ GGR+++VGTTSLRLLE+AT EDG+I P+ G T IFITPG
Sbjct: 226 HAEWGRIDAATADHLNAIRAAGGRVIAVGTTSLRLLESATGEDGVIRPFDGDTAIFITPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRA+D LM+NFHLPKSTL MLVSA G + + Y HAI+ YRFYSYGD+SLL
Sbjct: 286 YRFRAIDGLMTNFHLPKSTLFMLVSALMGRDRMQAAYAHAIAEGYRFYSYGDSSLLLP 343
>gi|300715561|ref|YP_003740364.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia billingiae Eb661]
gi|299061397|emb|CAX58507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia billingiae Eb661]
Length = 356
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 203/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ ++ +S + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQAQRSGCRLLSLN---GPDGELSHGIFTDLLDKLTPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKVS-----GGKIEVLVERMLDDHRVLAHVRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + ++ VG +PLPPYI RP + D Y
Sbjct: 113 ES---VKATMVAR--HDALFELQFDDERAVLDILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L L GI+ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDQPMLDALREKGIETAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+V+VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVVAVGTTSVRSLESAAQAAQDALIAPFFDDTKIFIF 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ +D L++NFHLP+STL+MLVSAF G T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYQYQVIDALVTNFHLPESTLIMLVSAFAGYRNTMHAYQQAVAEQYRFFSYGDAMFITR 345
>gi|147669366|ref|YP_001214184.1| queuosine biosynthesis protein [Dehalococcoides sp. BAV1]
gi|189038519|sp|A5FR63|QUEA_DEHSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146270314|gb|ABQ17306.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Dehalococcoides sp. BAV1]
Length = 343
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 136/359 (37%), Positives = 197/359 (54%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA +P PRDS+RL+V++ +++ + ++ + D +V
Sbjct: 1 MKTSDFDYNLPQEYIAQKPAEPRDSSRLLVLNRQS---EELTNRIFGEITDYFKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ +I L R W +PSK K G I+
Sbjct: 58 MNDSRVLPARIKGIK----QDTSAKIEILLLKRDGEGCWEALLKPSKRTKPGTIIDIHQP 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G +A V+ + LL FS + +G +PLPPYI Y
Sbjct: 114 NGGISTQAKVLADKDDSIKLLRFSDE-----THLMKLGEVPLPPYIHTPVAD----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT LL RL +G+ +VTLH+G TF PVK ED DH +
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTPELLKRLTEMGVICTYVTLHIGLDTFRPVKEEDPKDHKI 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H E G + TA A+ K G R+ VGT++ RL+E A+ ++ +I +SG+ ++FI
Sbjct: 225 HREYGILSKETASAICCAKETGKRVFCVGTSATRLVEQASHLSQTSLITSYSGWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+FR D ++NFHLP+ST LML SAF G +K Y+ AIS YRFYS+GD L+
Sbjct: 285 PGYKFRVADCFITNFHLPRSTPLMLTSAFAGWPFLRKAYEKAISEHYRFYSFGDAMLIL 343
>gi|254246280|ref|ZP_04939601.1| NAS-adenosylmethionine [Burkholderia cenocepacia PC184]
gi|124871056|gb|EAY62772.1| NAS-adenosylmethionine [Burkholderia cenocepacia PC184]
Length = 355
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 200/361 (55%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V ++ P + D ++LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDGSV-APARLVDRHFAELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 63 DTKVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLAD--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
E TV ++ L F ++L I G +PLPPYI DA D YQT
Sbjct: 115 --AFEVTVGERVEPF-FTLHFPAPCLDL---IEQHGRLPLPPYIEHD--ADATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|71274879|ref|ZP_00651167.1| Queuosine biosynthesis protein [Xylella fastidiosa Dixon]
gi|71901845|ref|ZP_00683909.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
gi|170729868|ref|YP_001775301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa M12]
gi|238687969|sp|B0U6A9|QUEA_XYLFM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71164611|gb|EAO14325.1| Queuosine biosynthesis protein [Xylella fastidiosa Dixon]
gi|71728396|gb|EAO30563.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
gi|167964661|gb|ACA11671.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Xylella
fastidiosa M12]
Length = 347
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RLM+V S P D V DLP L D +V
Sbjct: 2 LKKSDFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + + V R S+ +K G+ + +
Sbjct: 59 FNDTRVIPARLFGRKVS-----GGRVEVLIERFLGTHQAVVQLRTSRSLKVGNRILLDAG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE+ +S VG +PLPPYI R D D Y
Sbjct: 114 GHAEVL-------GRDGEFYLLSFDVESPLEQWLSDVGQLPLPPYI--HREPDEYDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V +H+M
Sbjct: 165 QTVFARAVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PG
Sbjct: 225 HSEWFKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y R+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 284 YCIRSVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|259909289|ref|YP_002649645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
pyrifoliae Ep1/96]
gi|224964911|emb|CAX56434.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia pyrifoliae Ep1/96]
gi|283479344|emb|CAY75260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
pyrifoliae DSM 12163]
Length = 358
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 200/360 (55%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP S IA P R RL+ ++ ++ + +DL LN D +V
Sbjct: 3 MRVADFTFKLPESLIAHYPQTQRSGCRLLSLNGPDGA---LTHGVFTDLLHKLNPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK + G L
Sbjct: 60 FNNTRVIPARIFGRKVS-----GGKIEVLVERMLDEKRVLAHVRSSKAPRPGSELLLGDD 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 115 E---NVQATMLARHDALFEIEFNDARP--VLDILNSIGHMPLPPYI--DRPDEDADRELY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 168 QTVYSQKPGAVAAPTAGLHFDEPLLEALREKGIETAFVTLHVGAGTFQPVRVDTIEEHIM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A G P+ G T IFI
Sbjct: 228 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQVAGNDLIAPFFGDTKIFIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 288 PGYHYQVIDALVTNFHLPESTLIMLVSAFAGYQNTMHAYQQAVAEQYRFFSYGDAMFITR 347
>gi|254497614|ref|ZP_05110399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
drancourtii LLAP12]
gi|254353163|gb|EET11913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
drancourtii LLAP12]
Length = 338
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 205/357 (57%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+ + ++ H D+ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLTYNRHIG---EYGHHQFRDIADFLKPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K G +++
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGEFTFLAHIKASKALKAGALIYLEQD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LE L S I++ + + VG +PLPPYI R + D Y
Sbjct: 113 RQLEVLE---------RHDDLFVCKSNIDVLQLLHGVGHMPLPPYIT--RSDEVMDEDRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHF +L+ L + G+ + VTLHVGAGTF PV+ E+ +H M
Sbjct: 162 QTVYAKYEGSVAAPTAGLHFDEAVLASLHARGVDIAHVTLHVGAGTFRPVRCENIKEHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+++ K+ G R+++VGTT+LR LE+A E G++ P S TNIFI PG
Sbjct: 222 HSEHFTLNPELCSAVHATKAAGNRVIAVGTTALRSLESAAQEGGVLTPCSRDTNIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D LM+NFHLP+STLLMLVSAF G +E +YQ AI+ YRF+SYGDTSLL
Sbjct: 282 YKFKICDGLMTNFHLPESTLLMLVSAFIGYKEAMMLYQEAIAKGYRFFSYGDTSLLL 338
>gi|148244311|ref|YP_001219005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Vesicomyosocius okutanii HA]
gi|166218755|sp|A5CXQ6|QUEA_VESOH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146326138|dbj|BAF61281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Vesicomyosocius okutanii HA]
Length = 340
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 138/358 (38%), Positives = 206/358 (57%), Gaps = 22/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+FDFDLP S IA P+ R +RL++ I D + + F S D ++
Sbjct: 1 MQLKDFDFDLPASLIAQHPIKNRTDSRLLI------KRSSIIDIQFNQIGDFFQSGDLLI 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + ++ + + N + S+ K G + +
Sbjct: 55 MNNTKVIPARLFGTKE-----TGGKVEIMIERILDENQVLAMIKASRAPKIGSCIFLEND 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ + + G L+F L ++ +G PLPPYI R + +D Y
Sbjct: 110 VN------IIVYQKDNGFYTLIFET--DSLFDLLNNIGHTPLPPYIK--RTNNVQDLSRY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +LL++L GI FVTLH+G+GTF P++ ++ +H+M
Sbjct: 160 QTVYAQKDGAVAAPTAGLHFDDSLLAQLKIQGIDHLFVTLHIGSGTFTPIRTDNIKNHVM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI I T +N K+ GGRI++VGTT++R+LE+ + ++G + +G T+IFI P
Sbjct: 220 HSEIFEISQVTVDRINLTKANGGRIIAVGTTTVRVLES-SLKNGKLIAQNGETDIFIYPS 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+FR VD L++NFHLPKS+LLMLVSAF G ++ ++Y+HAI Y+F SYGD L +
Sbjct: 279 YQFRIVDSLITNFHLPKSSLLMLVSAFIGRDKMLELYKHAIEQKYKFLSYGDAMFLEK 336
>gi|317493041|ref|ZP_07951465.1| tRNA ribosyltransferase-isomerase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919163|gb|EFV40498.1| tRNA ribosyltransferase-isomerase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 357
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 129/359 (35%), Positives = 197/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R + RL+ + + + +D+ +++ D ++
Sbjct: 1 MRVSDFSFELPDNLIARYPQAERSACRLLSLDGPTG---KLEHGVFTDVLNKIDAGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERLLDDTRVLAHVRASKSPKPGAELLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + V + + G ++ ++ G +PLPPYI RP + D Y
Sbjct: 113 E-----DIRVTMVARHDTLFELRFEDGRDVLTILNAAGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ ++H M
Sbjct: 166 QTVYSSRPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIENHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R +E A +D +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSIESAAAAAKDQLIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ YRF+SYGD +
Sbjct: 286 PGYHYQVIDALITNFHLPESTLIMLVSAFAGYKNTMHAYHEAVAKEYRFFSYGDAMFIT 344
>gi|254437697|ref|ZP_05051191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 307]
gi|198253143|gb|EDY77457.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 307]
Length = 350
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 161/361 (44%), Positives = 226/361 (62%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP S IA+RP PR SA+L+V + + D V+DL + L + D +V
Sbjct: 1 MKLSDFDFDLPDSLIAVRPARPRSSAKLLVAGGDGT-----RDLRVTDLVSVLRAGDHLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G R +I TL + +W+ +P + ++ G+ + F
Sbjct: 56 LNDTKVIPARLVGERMRKSTDGAGLAKIEVTLLEPQADGTWAALIKPLRKVRDGERVVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++ + G L F+++G + + ++ G +PLPPYIA KRP D D
Sbjct: 116 DD-----LSAVLVHR-FDGMGYLDFNVTGDDFDAALNAAGAMPLPPYIAAKRPADDLDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A G+VAAPTA LHF LL L ++G+K +VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVWAARSGAVAAPTASLHFEQWLLDDLAAMGVKFSYVTLHVGAGTFLPVKVDDVADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+MHSE G + A +A + + K+ GGR++ VGTT+ RL+ETA G + W G T+IFIT
Sbjct: 230 VMHSEWGQVSALSASDIMATKAAGGRVIPVGTTACRLIETAGAS-GTLAAWEGETDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G + K +Y HAI++ YRF+SYGD+S+L
Sbjct: 289 PGFEFQITDGLMTNFHLPKSTLMMLVSALMGSQRIKDIYAHAIANEYRFFSYGDSSILLP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|297621197|ref|YP_003709334.1| S-adenosylmethionine tRNA ribosyltransferase [Waddlia chondrophila
WSU 86-1044]
gi|297376498|gb|ADI38328.1| S-adenosylmethionine tRNA ribosyltransferase [Waddlia chondrophila
WSU 86-1044]
Length = 341
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 192/356 (53%), Gaps = 18/356 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + FDLP IA PV PRD +RLMV+ + I +LP FL D IVF
Sbjct: 4 KLESYQFDLPEDLIAKVPVTPRDHSRLMVIDRSSGKIEEIP---FYELPQFLGDGDRIVF 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+L G + ++ L + W ARP++ +KKG +
Sbjct: 61 NNTKVIPARLIGRKE-----TGGQVELLLLEEKTEGVWLTMARPARKLKKGTKVIVSD-- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
RL A +I++ + G L+ F G+ ++ G +PLPPY+ R D YQ
Sbjct: 114 ---RLCAEMIEELDEGMRLVRFDYEGL-FWEVLAAHGEMPLPPYLQRDELP-KLDRERYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK G+VAAPTAGLHFT LL L G+ + +TLHVG GTF PV + +H MH
Sbjct: 169 TIYAKHAGAVAAPTAGLHFTKTLLEELTEKGVDIVEITLHVGLGTFRPVTAKTITEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E +I A LN R + VGTT R LE+A E G + G T+IFI PGY
Sbjct: 229 EERYWITQEAASRLNRPAK---REICVGTTCCRALESAVNEQGNVFSGEGRTDIFIRPGY 285
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F+ V L++NFHLP STL+MLVSAF G + T Y+ A+ +RF+SYGD L+
Sbjct: 286 QFKKVTSLLTNFHLPGSTLMMLVSAFAGYDLTMNAYKKAVLDKFRFFSYGDAMLIL 341
>gi|188534665|ref|YP_001908462.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
tasmaniensis Et1/99]
gi|238689699|sp|B2VHQ4|QUEA_ERWT9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188029707|emb|CAO97586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia tasmaniensis Et1/99]
Length = 355
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 207/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ ++ + ++ + +DL LN D +V
Sbjct: 1 MRVADFTFELPESLIAHYPQAERSGCRLLSLNGSDGA---LTHGVFTDLLHKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARIFGRKAS-----GGKIEVLVERMLDDTRVLAHVRSSKAPKPGSDLLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + +T + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---VQATMLARHDTLFEIEFNDARP--VLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLVALREKGIETAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A E+ +I P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQAAENTLIAPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T + YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALVTNFHLPESTLIMLVSAFAGYKHTMRAYQQAVAEQYRFFSYGDAMFITR 345
>gi|332169225|gb|AEE18480.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Krokinobacter diaphorus 4H-3-7-5]
Length = 349
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 197/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A RP RD +RLMV++ I + D+ + D +V
Sbjct: 1 MKLSHFNFDLPDELLADRPAENRDESRLMVLNRKEQT---IEHKMFKDIIDYFEPEDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++++ +G PLP YI R ++ D
Sbjct: 114 DDES---LVAEVIDNTTSRGRTLRFLYDGSYEEFRKKLTSLGETPLPKYIN--REVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA +G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF V+VED
Sbjct: 169 EDRYQTIYATEEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEVTLHVGLGTFSAVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +I P + +N RI +VGTTS+R++E+A + + +N + G+TN F
Sbjct: 229 KHKMDSEEAYIHKPATEIINKALKEKRRICAVGTTSMRVMESAVSSNHTLNEFGGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + K+ Y+ A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMITNFHTPKSTLLMMVSAFAGHDFMKRAYEEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|238897332|ref|YP_002923009.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259551456|sp|C4K8M4|QUEA_HAMD5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|229465087|gb|ACQ66861.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 357
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P+ R RL+ ++ +++ + +DL L D +V
Sbjct: 1 MRLSDFSFELPESLVAQYPLEKRSDCRLLCLNGETGT---MTEGVFTDLLYQLEQGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A++ G + ++ + +SPN V+ + SK K G
Sbjct: 58 LNNTRVIPARVFGRKPS-----GGKLEILVERILSPNRVLVHLKSSKTPKLGAQFLL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + + + L F + L S+ G IPLPPYI R + +D+ Y
Sbjct: 110 -GDTANIPVTLMARHASLFELRFDVREDALMLLQSI-GHIPLPPYI--PRADEPKDHELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF + LL+ L + GI+ FVTLHVGAGTF PVK ++ +H+M
Sbjct: 166 QTVYGQHLGAVAAPTAGLHFDNPLLNALKARGIETAFVTLHVGAGTFQPVKTDNITEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LETA T++ + P+SG T+IFI
Sbjct: 226 HSEYAEVSQEVVDAVLACKARGKRVVAVGTTSVRSLETAAQKTKNSFLTPFSGETSIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ VD L++NFHLPKSTL+MLV AF G + T + Y+ AI YRF+SYGD +
Sbjct: 286 PGYQYQIVDALITNFHLPKSTLIMLVCAFAGYQNTLRAYKKAIDEKYRFFSYGDAMFI 343
>gi|288818534|ref|YP_003432882.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase/queuine
synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787934|dbj|BAI69681.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase/queuine
synthetase [Hydrogenobacter thermophilus TK-6]
gi|308752124|gb|ADO45607.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Hydrogenobacter thermophilus TK-6]
Length = 334
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 195/357 (54%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF+LPP IA P+ R ARLMV++ I + +LP +L D +V
Sbjct: 1 MRLEDFDFELPPELIAKYPLKERHMARLMVLNRK---DKSIKHDIFWNLPLYLEEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + + L + + W K I++G ++
Sbjct: 58 FNNTKVIPARLYGKK-----PTGGRVEILLTDMLKEHLWYALV-SGKNIREGLCVYIAQD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L+ K + + + + + G IP+PPY+ R + D V Y
Sbjct: 112 LSVNILKHISEGK-------FLVELLSQDPIKALYTYGHIPIPPYLE--REEEHIDRVYY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +GSVAAPTA LHF+ LL+RL GI+ F+TLHV GTF P+KV D +H +
Sbjct: 163 QTVFAQKEGSVAAPTASLHFSEELLNRLDEYGIRKAFITLHVSYGTFKPIKVSDIREHKV 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + T + + VK G ++V+VGTT +R LET +P+SG T+++I PG
Sbjct: 223 DEEYMEVPEETVELIKKVKQEGKKVVAVGTTVVRALET-----KPFSPFSGKTDLYIYPG 277
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD +++NFHLP+S+LL+LVSAF G E YQ AI YRFYSYGD L+
Sbjct: 278 YTFKVVDAMITNFHLPRSSLLLLVSAFAGREFILSAYQIAIKERYRFYSYGDGMLIL 334
>gi|302879498|ref|YP_003848062.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Gallionella
capsiferriformans ES-2]
gi|302582287|gb|ADL56298.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Gallionella
capsiferriformans ES-2]
Length = 344
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 197/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFDF LP IA P R ++RL+ VH ++ D DL + D +V
Sbjct: 1 MRTDEFDFALPDGLIAQHPPEKRGASRLLCVH-----DGILEDSQFVDLLQKVAPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ +I + ++ + R SK G +
Sbjct: 56 LNDTRVIRARLFGIKRS-----GGKIEVMVERVLNNHEVLAQVRASKSPPTGSYVLL--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+ + GE + + + + G +PLPPYI +A D Y
Sbjct: 108 --AGELSVEVMGR--AGEFYHLRFCAEEPVLELLERYGRLPLPPYITHA--AEAEDETRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +L L G+K+ +VTLHVGAGTF PV+ E +HIM
Sbjct: 162 QTVFARQSGAVAAPTAGLHFDDAMLEALQDKGVKIAYVTLHVGAGTFQPVRAEWLSEHIM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T A+ + GGR+V+VGTTSLR LE+A G + +G T IFITPG
Sbjct: 222 HSECYQISQATVDAIEQTHAAGGRVVAVGTTSLRALESAAAS-GELQSGAGETRIFITPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR VD+L++NFHLPKSTLLMLVSAF G+ E + Y HA++ YRF+SYGD L+ +
Sbjct: 281 YRFRVVDVLLTNFHLPKSTLLMLVSAFGGMSEMRAAYLHAVAQQYRFFSYGDAMLIEK 338
>gi|170732044|ref|YP_001763991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia MC0-3]
gi|238688590|sp|B1JVY9|QUEA_BURCC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169815286|gb|ACA89869.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia cenocepacia MC0-3]
Length = 355
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 197/361 (54%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V ++ P + D ++LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDGSV-APARLVDRHFAELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 63 DTKVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F ++L I G +PLPPYI DA D YQT
Sbjct: 118 ------VTVGERVEPFFTLHFPAPCLDL---IEQHGRLPLPPYIEHD--ADATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|86145575|ref|ZP_01063905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
MED222]
gi|85836546|gb|EAQ54672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
MED222]
Length = 350
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 202/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D ++
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNNGN---LADGSFKDVLDLVEPGDLVI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D EA ++ + + + S + ++ VG +PLPPYI RP + D Y
Sbjct: 113 D---EYEAEMVAR--HDALFEIHFTSDQSVLEILNSVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ + G++ +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDKLMADMKEKGVEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGII-NPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A ++G P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAAAKARGGRIIAVGTTSVRSLESAAQDAVKNGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 NKK 348
>gi|325286897|ref|YP_004262687.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Cellulophaga
lytica DSM 7489]
gi|324322351|gb|ADY29816.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Cellulophaga
lytica DSM 7489]
Length = 349
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 142/361 (39%), Positives = 201/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP + +A P RD A+LMV+H I + DL + + D +V
Sbjct: 1 MKLSSFNFELPDNLLAEYPSEHRDEAKLMVIHRETG---KIEHKMFKDLINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + +++ +G PLP YI R ++ D
Sbjct: 114 DDET---LVAEVIDNTTSRGRTLRFLYDGSYTDFRQKLKDLGETPLPKYIK--REVEESD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL G+ +TLHVG GTF PV+VED
Sbjct: 169 EDRYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGVDFAELTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID + +N+ RI ++GTT++R LE+A + +G +N + G+TN F
Sbjct: 229 KHKMDSEELVIDEKATEVVNAAIDNKRRICAIGTTAMRGLESAVSSNGHLNTYEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLPKSTLLM+VSAF G + KK Y+ AI +Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANSMVTNFHLPKSTLLMMVSAFIGHDLMKKAYKEAILESYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|291613426|ref|YP_003523583.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sideroxydans lithotrophicus ES-1]
gi|291583538|gb|ADE11196.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sideroxydans lithotrophicus ES-1]
Length = 340
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 199/360 (55%), Gaps = 20/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P R ++RL+ V + D +DL ++ +D +V
Sbjct: 1 MRTDDFDFILPERLIAQHPPLQRGASRLLQV-----GKTGLKDSQFADLHGLVHGHDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + ++ + + + R SK K G L
Sbjct: 56 LNDTRVLKARLFGEKES-----GGKVEVLVERVLGEHEVLAQVRASKTPKPGSRLLLAE- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L V+ + GE + + + G +PLPPYIA + Y
Sbjct: 110 ----KLRVKVLGR--EGEFFHLCFEGAAAVTALLERYGHLPLPPYIAHVAGAED--EERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +L L + + +VTLHVGAGTF PV+ E+ ++H+M
Sbjct: 162 QTVFAREPGAVAAPTAGLHFGETMLQALRDKKVDIAYVTLHVGAGTFKPVRAENIEEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T A+ K++GGRI++VGTTSLR LE+A G + SG T+IFITPG
Sbjct: 222 HSERYTIPQATVDAIREAKAKGGRIIAVGTTSLRALESAAAS-GELVAGSGETSIFITPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD+L++NFHLP+STLLMLV AF G+E+ Y+HA+ YRF+SYGD L+ +++
Sbjct: 281 YRFGVVDVLLTNFHLPRSTLLMLVCAFGGMEKMLAAYRHAVEKEYRFFSYGDAMLIEREQ 340
>gi|218889892|ref|YP_002438756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa LESB58]
gi|226736742|sp|B7UVU3|QUEA_PSEA8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218770115|emb|CAW25877.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa LESB58]
Length = 347
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 197/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQDRVLAHIRASKAPKPGTRILVEGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ L + + VG +PLPPYI RP DA D Y
Sbjct: 113 GSAEMLQ---------RHDALFELAFAEPVLPLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVSVCRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 338
>gi|300087727|ref|YP_003758249.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527460|gb|ADJ25928.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 343
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 137/356 (38%), Positives = 202/356 (56%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP + IA P PRDS+RL+V++ + I D+ +L DA+V
Sbjct: 1 MKTADFNYHLPENLIAQTPAEPRDSSRLLVLNRDTGS---IEHRRFRDIIDYLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++VI A+L G +F +I L R + N W +PSK + G + Q
Sbjct: 58 FNDSRVIPARLYGHKFG----TGAKIEALLLTRKAGNEWQALLKPSKKLSPGTKVELHDQ 113
Query: 121 DGQS-RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
GQ + V+ K G + I E ++ +G + LPPYI + +
Sbjct: 114 SGQDSGVTFEVLSKSEDGIADIR-----ISDENRLQDLGILALPPYIHHR----LDEPER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++I GSVAAPTAGLHFT LL + S GIK+ FVTLH+G TF PVK E+ +H
Sbjct: 165 YQTVYSRINGSVAAPTAGLHFTPELLKTIESKGIKLLFVTLHIGLDTFRPVKEENPANHP 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-NPWSGFTNIFIT 298
+H E + TA+A+N VK++GGR+ VGT+++R LE A G+ P+ G+ +FI
Sbjct: 225 IHREFAILTKETAEAINEVKAKGGRVYGVGTSAVRTLEWAAKNYGLPLQPFEGWVELFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
PG+ +R +D L++NFHLP T LML +AF G + K+ Y+ A+ YRF+S+GD+
Sbjct: 285 PGFEYRVIDRLITNFHLPCGTPLMLTAAFAGWDNVKRAYEAAVVEEYRFFSFGDSM 340
>gi|49087346|gb|AAT51447.1| PA3824 [synthetic construct]
Length = 348
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 197/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQHRVLAHIRASKAPKPGTRILVEGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ L + + VG +PLPPYI RP DA D Y
Sbjct: 113 GSAEMLQ---------RHDALFELAFAEPVLPLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVSVCRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 338
>gi|157369303|ref|YP_001477292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
proteamaculans 568]
gi|167016408|sp|A8GAM4|QUEA_SERP5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157321067|gb|ABV40164.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Serratia
proteamaculans 568]
Length = 356
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 201/360 (55%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + + + +DL L + D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSGCRLLQLDGPSG---ELKHGVFTDLLDNLEAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKVS-----GGKIEVLVERVLDDHRVLAHVRASKAPKPGTDLLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + D + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 ESIAATMVARHDTLFE-----LRFNDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+VE ++H+M
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVETIEEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+V+VGTTS+R LE+A +++ +I P+ T+IFI
Sbjct: 226 HAEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANASKEALIAPFFDDTSIFIF 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMHAYQQAVAEQYRFFSYGDAMFISR 345
>gi|283769037|ref|ZP_06341943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bulleidia
extructa W1219]
gi|283104394|gb|EFC05771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bulleidia
extructa W1219]
Length = 347
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 138/355 (38%), Positives = 199/355 (56%), Gaps = 16/355 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD++LP IA P+ R ++R+M +H D D+ L D +V
Sbjct: 6 KTSDFDYNLPHELIAQSPLADRSTSRMMWIHKKSQ---KYEDKHFYDIVDILKPGDVLVR 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G++ + L + + W A +KV+K G I+ F
Sbjct: 63 NNTRVIPARLFGIK----EETGAHVELLLLKQKEHDVWECLAGNAKVVKVGSIVSF---- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G +L+A + + G + GI + +G +PLPPYI +K YQ
Sbjct: 115 GDGQLKAQCLSIGDKGLREMKMLYEGI-FTEILDQLGQVPLPPYIKKKLDDS----ERYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAKI GS AAPTAGLHFT + +L++ GI + VTLHVG GTF P+ VE+ DH+MH
Sbjct: 170 TVYAKIDGSAAAPTAGLHFTKEVDQQLLAKGITITEVTLHVGLGTFRPMDVENVHDHVMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE+ + TA LN K G RIV++GTTS+R LE+ G G T +FI PGY
Sbjct: 230 SEVYEMSQETADILNQAKKLGRRIVAIGTTSVRTLESVWNRFGQFQECRGETTLFIYPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ D++++NFHLPKSTLLM++S+F G E T+++Y HA++ YRF+S+GD L+
Sbjct: 290 QWHTCDVMLTNFHLPKSTLLMMISSFMGYELTQEVYHHAVNEKYRFFSFGDCMLI 344
>gi|304395468|ref|ZP_07377351.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
aB]
gi|304356762|gb|EFM21126.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
aB]
Length = 356
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 136/358 (37%), Positives = 201/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + +S + +D+ LN D +V
Sbjct: 1 MRVADFAFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LSHGVFTDVLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + ++ + ++ VG +PLPPYI RP + D Y
Sbjct: 113 ES---VKATMVARHDALFEIVFDDER--AVLDILNSVGHMPLPPYI--DRPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+VE ++H M
Sbjct: 166 QTVYSARPGAVAAPTAGLHFDEPLLQALKEKGVEMAFVTLHVGAGTFQPVRVETIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 226 HAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ YRF+SYGD +
Sbjct: 286 PGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYHAAVAEQYRFFSYGDAMFI 343
>gi|302874955|ref|YP_003843588.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
cellulovorans 743B]
gi|307690427|ref|ZP_07632873.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
cellulovorans 743B]
gi|302577812|gb|ADL51824.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
cellulovorans 743B]
Length = 341
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK++ +DLP IA P RD + + D+ L++ D +V
Sbjct: 1 MDVKDYYYDLPEELIAQHPSEERDLC---RLLLLDKISGETEHKIFKDIIDELHTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + ++ L R+ ++W +P K K G F
Sbjct: 58 LNDTRVLPARLIGEK----EDTHGKMEFLLLKRIEKDTWQALVKPGKRAKIGSRFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+D + G ++ F GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGILKAEVVDISDEGSRIIKFFYDGI-FEEVLDSLGEMPLPPYITEKLDD----KEKY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LLS++ + GIK+ ++TLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYSKNNGSAAAPTAGLHFTKELLSKIEAKGIKIAYLTLHVGLGTFRPVKVDKIEEHFM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T+ +NS K+ GGRI+ VGTTS+R LET +DG + G+T+IFI PG
Sbjct: 225 HSEYFNVSEETSNIINSTKANGGRIICVGTTSVRTLETVAEKDGKVIAKDGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA E Y+ A+ YRF+S+GD +
Sbjct: 285 YQYKVVDALITNFHLPESTLLMLVSALSSRENIINAYELAVKEQYRFFSFGDAMFI 340
>gi|254361281|ref|ZP_04977424.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica PHL213]
gi|153092777|gb|EDN73820.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica PHL213]
Length = 361
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 129/362 (35%), Positives = 194/362 (53%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP IA P R ++RL+ ++ +D DL +N D ++
Sbjct: 1 MLVSDFHFNLPDELIARYPTAERSASRLLHLNGETG---EFADQQFVDLYDHINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K+G L F
Sbjct: 58 FNNTRVIPARLYGRKPS-----GGKVEALVERVLDEHRCLAHVKASKAPKEGAELIFGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
T + + L + G +PLPPYI RP + D Y
Sbjct: 113 KLGEGKGFTATMVARHDTLFELVFNEEQPLFELLQQAGHMPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF + +L +L + G+ FVTLHVGAGTF PV+VE +DH M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDNAMLEKLKAKGVDTAFVTLHVGAGTFQPVRVETIEDHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + + + K++G R++++GTTS+R +E+A + +I P+ T IF
Sbjct: 231 HAEYAEVSQEVVDKILATKAKGKRVIAIGTTSVRSVESAAQAAEKDGKLIAPFFSDTAIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG F+ +D L++NFHLP+STL+MLVSAF G T Y HA+ YRF+SYGD +
Sbjct: 291 LYPGKTFKVIDALVTNFHLPESTLIMLVSAFAGYRNTMNAYAHAVETKYRFFSYGDAMFI 350
Query: 357 FQ 358
+
Sbjct: 351 NK 352
>gi|308185876|ref|YP_003930007.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Pantoea
vagans C9-1]
gi|308056386|gb|ADO08558.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Pantoea
vagans C9-1]
Length = 432
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 137/358 (38%), Positives = 201/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + +S + +D+ LN D +V
Sbjct: 77 MRVADFAFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LSHGVFTDVLDKLNPGDLLV 133
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 134 FNNTRVIPARVFGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGED 188
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + + ++ VG +PLPPYI RP + D Y
Sbjct: 189 ES---VKATMVARHDA--LFEIAFDDERAVLDILNSVGHMPLPPYI--DRPDEEADRELY 241
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL L GI++ FVTLHVGAGTF PV+VE ++H M
Sbjct: 242 QTVYSARPGAVAAPTAGLHFDEPLLQALKEKGIEMAFVTLHVGAGTFQPVRVETIEEHHM 301
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 302 HAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 361
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ YRF+SYGD +
Sbjct: 362 PGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYHAAVAEQYRFFSYGDAMFI 419
>gi|94265186|ref|ZP_01288948.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
gi|93454327|gb|EAT04634.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
Length = 370
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 133/368 (36%), Positives = 194/368 (52%), Gaps = 19/368 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LPP IA +P RD++RL+V + + D +L L+ D +VFN
Sbjct: 11 LSDYDYHLPPELIAQQPAARRDASRLLVCDCRGAG---LVDRHFPELLDLLSPGDLLVFN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP----------NSWSVYARPSKVIKKG 112
+T+V A+L G + + + + + SK +K+G
Sbjct: 68 DTRVFPARLLGRKASGGRGELLLLEYPVAPAAADVGSAAGGESSFHAWALCKTSKGVKEG 127
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRP 171
L F L+A V++ G + ++ G L+ ++ G +PLPPYI R
Sbjct: 128 LKLLFGDD-----LQAEVVELGEGGRARVRLQVAAGQTLDGCLARHGRMPLPPYIRRSEA 182
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D YQT YA + G+VAAPTAGLHFT LL+ + + G++ VTLHVG GTF PV+
Sbjct: 183 ETPEDRQRYQTVYAAVTGAVAAPTAGLHFTPELLAAIAAKGVRQARVTLHVGYGTFSPVR 242
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
V D +H +H E I A + ++ GGRI +VGTT++R LETA G + P SG
Sbjct: 243 VRDIREHAIHGEYYAITPENAALVEQTRAAGGRIWAVGTTAVRALETAADAAGRLTPGSG 302
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
++I PGYRF+ VD L++NFHLP+S+LL LVSA G Y HA++ YRF+SYG
Sbjct: 303 ICELYIYPGYRFKVVDNLLTNFHLPRSSLLFLVSALAGRRRILAAYNHAVARGYRFFSYG 362
Query: 352 DTSLLFQK 359
D + K
Sbjct: 363 DAMAIINK 370
>gi|28198472|ref|NP_778786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa Temecula1]
gi|182681150|ref|YP_001829310.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa M23]
gi|32129946|sp|Q87DW7|QUEA_XYLFT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238691103|sp|B2I961|QUEA_XYLF2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|28056556|gb|AAO28435.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Xylella
fastidiosa Temecula1]
gi|182631260|gb|ACB92036.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Xylella
fastidiosa M23]
gi|307579595|gb|ADN63564.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa subsp. fastidiosa GB514]
Length = 347
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RLM+V S P D V DLP L D +V
Sbjct: 2 LKKSDFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + + V R S+ +K G+ + +
Sbjct: 59 FNDTRVIPARLFGRKVS-----GGRVELLIERFLGTHQAVVQLRTSRSLKVGNRILLDAG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE+ +S VG +PLPPYI R D D Y
Sbjct: 114 GHAEVL-------GRDGEFYLLSFDVESPLEQWLSDVGQLPLPPYI--HREPDEYDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V +H+M
Sbjct: 165 QTVFARSVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PG
Sbjct: 225 HSEWFKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y R+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 284 YCIRSVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|16331808|ref|NP_442536.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechocystis sp. PCC 6803]
gi|3914540|sp|Q55850|QUEA_SYNY3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|1001768|dbj|BAA10606.1| queuosine biosynthesis protein; QueA [Synechocystis sp. PCC 6803]
Length = 366
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 139/364 (38%), Positives = 201/364 (55%), Gaps = 20/364 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LP IA P PRD +RL+VV P + DL +L D +V N
Sbjct: 7 LSSYDYHLPADCIAQTPAVPRDHSRLLVV----KDPFTVDHQHFYDLGNYLKPGDLLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+L+G + + L + N W +P K +K G + F ++DG
Sbjct: 63 DTKVMPARLHGQKE-----NGVAVEILLLTECTENQWIALVKPGKRLKLGAKVKFPARDG 117
Query: 123 Q-SRLEATVIDKWN-TGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L AT++ + + TG LL F + G L + G IP PPYI ++ + +
Sbjct: 118 EKPDLWATILQRDDATGGRLLEFVLEPGQRLWDVLPDYGEIPFPPYIGDRQATNDQ---- 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHFT L ++L G++ VTLHVG GTF PV+ E+ DH+
Sbjct: 174 YQTIYAEKLGAVAAPTAGLHFTEELFTKLAQQGVQTAKVTLHVGIGTFRPVEAENILDHV 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII----NPWSGFTNI 295
MH E + T + + ++ GGRI +VGTT +R LE E P+ G T++
Sbjct: 234 MHQEWIDVPPTTVEVIEKTRASGGRIFAVGTTVVRCLEGMAQESDFPRQPLQPFRGQTDL 293
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY++R VD L++NFHLPKS+LLMLVSA +Y+ AI+ YRFYS+GD +
Sbjct: 294 FIYPGYQWRLVDGLITNFHLPKSSLLMLVSALISRPRLMAIYETAIAKGYRFYSFGDAMV 353
Query: 356 LFQK 359
+ +
Sbjct: 354 ILPE 357
>gi|15599019|ref|NP_252513.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PAO1]
gi|107103344|ref|ZP_01367262.1| hypothetical protein PaerPA_01004413 [Pseudomonas aeruginosa PACS2]
gi|254236728|ref|ZP_04930051.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa C3719]
gi|254242515|ref|ZP_04935837.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa 2192]
gi|21263918|sp|Q9HXH8|QUEA_PSEAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|9949998|gb|AAG07211.1|AE004799_17 S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa PAO1]
gi|126168659|gb|EAZ54170.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa C3719]
gi|126195893|gb|EAZ59956.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa 2192]
Length = 347
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 197/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQHRVLAHIRASKAPKPGTRILVEGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ L + + VG +PLPPYI RP DA D Y
Sbjct: 113 GSAEMLQ---------RHDALFELAFAEPVLPLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVSVCRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 338
>gi|126462385|ref|YP_001043499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides ATCC 17029]
gi|166216744|sp|A3PK61|QUEA_RHOS1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126104049|gb|ABN76727.1| Queuosine biosynthesis protein [Rhodobacter sphaeroides ATCC 17029]
Length = 346
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 163/358 (45%), Positives = 210/358 (58%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E + TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTRGEA--EARVEVTLMEPAAAGGWRAMAKPLRKLKPGETIRFSD- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T L+ F +G + ++ G +PLPPYIA +R DA+D DY
Sbjct: 113 ----ALSAEVAEKGETDLRLV-FDRAGAAFDAALAEAGAMPLPPYIAARRAPDAQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + + VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARSVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLLIP 344
>gi|107021799|ref|YP_620126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia AU 1054]
gi|116688746|ref|YP_834369.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia HI2424]
gi|123245266|sp|Q1BZ02|QUEA_BURCA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216705|sp|A0K4P9|QUEA_BURCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|105891988|gb|ABF75153.1| S-adenosylmethionine [Burkholderia cenocepacia AU 1054]
gi|116646835|gb|ABK07476.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia cenocepacia HI2424]
Length = 355
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 197/361 (54%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V ++ P + D ++LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDGSV-APARLVDRHFAELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 63 DTKVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F ++L I G +PLPPYI DA D YQT
Sbjct: 118 ------VTVGERVEPFFTLHFPAPCLDL---IEQHGRLPLPPYIEHD--ADATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPLLDKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|289548841|ref|YP_003473829.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermocrinis albus DSM 14484]
gi|289182458|gb|ADC89702.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermocrinis albus DSM 14484]
Length = 341
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 192/357 (53%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +EFD+ LP IA PV PR +ARLMV++ I + +LP +L D ++
Sbjct: 8 MRTEEFDYYLPKELIAKYPVEPRHAARLMVINRKDGS---IKHDIFWNLPLYLQEGDLVI 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + + L V + W K I++G ++
Sbjct: 65 FNNSKVLPARLFGHK-----PTGGRVEILLTDYVDKHVWRALI-GGKNIREGMVIEVGED 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ V G+ + + R + G IP+PPY+ R + D V Y
Sbjct: 119 -----LKVEVRRHLEGGK--FEVFLISSDPARALDRYGHIPIPPYLE--REDEPIDRVYY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +GSVAAPTA LHF+ LL RL GIK F+TLHV GTF PVKV + ++H +
Sbjct: 170 QTVFAQEEGSVAAPTASLHFSQELLDRLEEFGIKKAFITLHVSYGTFKPVKVSEVEEHRV 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + T + + K +G R+V+VGTT +R LETA P+ G+T+++I PG
Sbjct: 230 DPEYIKVPQETIELIKRTKEKGKRVVAVGTTVVRALETAVD-----KPYEGWTDLYIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLP+S+LL LV AF G + Y A+ YRFYSYGD L+
Sbjct: 285 YQFKVVDALVTNFHLPRSSLLFLVCAFGGKDLIMHAYNVAVKERYRFYSYGDGMLIL 341
>gi|320186034|gb|EFW60779.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri CDC 796-83]
Length = 356
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 197/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFFFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTSVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 LGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|284928957|ref|YP_003421479.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[cyanobacterium UCYN-A]
gi|284809416|gb|ADB95121.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[cyanobacterium UCYN-A]
Length = 361
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 139/366 (37%), Positives = 202/366 (55%), Gaps = 24/366 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +++ LP IA P+ PRDS+RL+V++ +LP +L D +VFN
Sbjct: 7 LSSYNYYLPSDLIAQSPLVPRDSSRLLVIN----SLDTHIHSFFHELPKWLLPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ-- 120
NT+VI A+L G + ++ L P SW +P K K G + F +
Sbjct: 63 NTQVIPARLYGQK-----TTGAKVEVLLLEEKEPFSWLALVKPGKRFKIGSEILFKEKLD 117
Query: 121 --DGQSRLEATVID-KWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARD 176
+ ++ATV+D TG +L F +S + + +G +PLPPYI+ ++
Sbjct: 118 DLNQDFLIKATVVDQDEETGGRILKFDVSSRKIFWEALERIGHLPLPPYISNCNAHSSQ- 176
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHFT LL +L GI+ ++TLHVG GTF PV +D
Sbjct: 177 ---YQTIYAQKPGAVAAPTAGLHFTQELLQKLQKKGIEQAYITLHVGLGTFRPVSTDDIK 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-----NPWSG 291
H MH E + + T Q ++ K GGR+++VGTT +R LE E + +SG
Sbjct: 234 QHTMHQEWVEVPSETIQKIHKTKINGGRVIAVGTTVVRALEGMANETSMDTEYGVKSFSG 293
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PGY +R +D +++NFHLPKS+LLMLVSA G + ++Y+ AI YRFYS+G
Sbjct: 294 KTDIFIYPGYSWRLIDGMITNFHLPKSSLLMLVSALIGRKRLLELYKIAIEQKYRFYSFG 353
Query: 352 DTSLLF 357
D L+
Sbjct: 354 DGMLVL 359
>gi|187477350|ref|YP_785374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
avium 197N]
gi|115421936|emb|CAJ48456.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
avium 197N]
Length = 346
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 141/355 (39%), Positives = 202/355 (56%), Gaps = 20/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLPP IA P R +RL+ + + D +DL A L ND +VFN
Sbjct: 6 LSDFDYDLPPELIAQTPAAQRGGSRLLHLD----AGSQLHDRQFADLLALLRPNDLLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + P+ + R SK G L
Sbjct: 62 DTRVIKARLTGQKA-----TGGKVEVLVERITEPDRALAHVRASKSPGPGMRLELAGGAV 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
++ + + ++ L F+ ++L G PLPPYI + YQT
Sbjct: 117 RAEVLGRQGELFD-----LRFAGPVLDLL---EAHGATPLPPYITHSAESEDN--ERYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF ++L+R+ ++G+ FVTLHVGAGTF PV+VE D+HIMH+
Sbjct: 167 VYAREPGAVAAPTAGLHFDQDMLARIEALGVARAFVTLHVGAGTFQPVRVEKIDEHIMHA 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + T QA+ ++ GGR+++VGTTS+R LE+A DG + G T +FITPGY
Sbjct: 227 EWYTVPEATVQAIARARAAGGRVIAVGTTSVRALESAAAAGDGPLAAAQGDTRLFITPGY 286
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
R+R VD L++NFHLP+STLLMLVSA GIE ++ Y HA++ YRF+SYGD +
Sbjct: 287 RYRVVDALITNFHLPQSTLLMLVSALAGIEPIRRAYAHAVAGRYRFFSYGDAMFI 341
>gi|77463529|ref|YP_353033.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides 2.4.1]
gi|91207401|sp|Q3J252|QUEA_RHOS4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77387947|gb|ABA79132.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides 2.4.1]
Length = 346
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 163/358 (45%), Positives = 210/358 (58%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E + TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTRGEA--EARVEVTLMEPAAAGGWRAMAKPLRKLKPGETIRFSD- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T L+ F +G + ++ G +PLPPYIA +R D +D DY
Sbjct: 113 ----ALSAEVAEKGETDLRLV-FDRAGAAFDAALAEAGAMPLPPYIAARRAPDTQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARGVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTETAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLLIP 344
>gi|319953715|ref|YP_004164982.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Cellulophaga algicola DSM 14237]
gi|319422375|gb|ADV49484.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Cellulophaga algicola DSM 14237]
Length = 349
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 144/361 (39%), Positives = 199/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ++LMV+H I + D+ + + D +V
Sbjct: 1 MKLSGFNFELPEELLAEYPAENRDESKLMVIHRETG---KIEHKMFKDMINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G + R++ +G PLP YI R +A D
Sbjct: 114 DDDT---LVAEVIDNTTSRGRTLRFLYDGSYTDFRRKLKELGDTPLPKYIK--RETEAED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI +TLHVG GTF PV+VED
Sbjct: 169 AERYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGIDFAELTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID T + +N+ K RI ++GTT++R LE+ + +N + G+TN F
Sbjct: 229 KHKMDSEELIIDEKTTEIVNNAKKNKKRICAIGTTAMRGLESGVSSQHTLNTFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLPKSTLLM+VSAF G + KK Y+ AI Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMVTNFHLPKSTLLMMVSAFMGHDLMKKAYKEAILEGYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|255535319|ref|YP_003095690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteriaceae bacterium 3519-10]
gi|255341515|gb|ACU07628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteriaceae bacterium 3519-10]
Length = 349
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 135/361 (37%), Positives = 192/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+F LP +A P RD A+LMV+ I D+ + + D +
Sbjct: 1 MKTSDFNFHLPEELLAEHPSEHRDDAKLMVLDRKTQT---IEHKTFKDVVDYFDEKDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + +I L + W V P++ I+ G+ L F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGAKIEVFLLRELDKETRVWDVLVDPARKIRIGNKLFFT 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++ +G PLP YI R ++ D
Sbjct: 114 EDES---LVAEVIDNTTSRGRTLRFLYDGSYEEFRTKLKELGETPLPKYIK--RDVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ +L GI VTLHVG GTF P++VED
Sbjct: 169 AERYQTIYAKHEGAVAAPTAGLHFSRHLMKKLEIKGIDFAEVTLHVGLGTFNPIEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID A +N + R+ +VGTT++R LET+ + + I P+ G+TN F
Sbjct: 229 KHKMESEEAIIDQLNADIINKAVAEQRRVCAVGTTTMRALETSVSSNKKIGPYHGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P + F + +++NFH PKSTLLM+++AF G + Y+ AI + Y+FYSYGD L+
Sbjct: 289 IFPPHDFGVANAMITNFHTPKSTLLMMIAAFAGKDFLMHAYEEAIKNEYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|221639392|ref|YP_002525654.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides KD131]
gi|254764285|sp|B9KT07|QUEA_RHOSK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221160173|gb|ACM01153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides KD131]
Length = 346
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 165/358 (46%), Positives = 211/358 (58%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E I TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTRGEA--EARIEVTLMEPAAAGGWRAMAKPLRKLKPGETIRFSD- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T L+ F +G + ++ G +PLPPYIA +R DA+D DY
Sbjct: 113 ----ALSAEVAEKGETDLRLV-FDRAGAAFDAALADAGAMPLPPYIAARRAPDAQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARGVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLLIP 344
>gi|262371662|ref|ZP_06064941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter junii SH205]
gi|262311687|gb|EEY92772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter junii SH205]
Length = 345
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 131/359 (36%), Positives = 187/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P+ R ++RL+ + DH +D+ LN D +V
Sbjct: 1 MQLSDFSFDLPDELIARYPLESRSASRLLHID----DQGHYHDHSFTDILDLLNEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + ++ + + S K G L+
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEVLVERMLDTHTAHCHIKSSNSPKAGAELYIGED 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ + L + + G +P+PPY R + D Y
Sbjct: 112 SVPVTVQGRHEN--------LFVVEFSQPILSILDQYGQLPIPPYFN--REAEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF +LL +L + G++ FVTLHVGAGTFMPV+ D +H
Sbjct: 162 QTVFHDPEKIASVAAPTASLHFDQDLLEKLAAKGVQKTFVTLHVGAGTFMPVRTTDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + K+RG ++++VGTT+ R LE+A DG I W+G T IFI
Sbjct: 222 IMHSEWCDVPQSTIDLILETKARGNKVIAVGTTATRALESAAQANDGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILSAYEHAVKERYRFFSYGDAMLI 340
>gi|254450756|ref|ZP_05064193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 238]
gi|198265162|gb|EDY89432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 238]
Length = 350
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 162/361 (44%), Positives = 225/361 (62%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA+RPV PR SA+L+V D V+DL + L + D +V
Sbjct: 1 MKLSDFDFDLPDTLIAVRPVRPRSSAKLLVADG-----PETHDLQVTDLRSVLQAGDHLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G R +I TL + +W+ +P + ++ G+ + F
Sbjct: 56 LNDTKVIPARLFGERIRKSPDGAGLAKIEVTLLEPQADGTWAALIKPLRKVRDGERIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++ + G L F++ + + ++ VG +PLPPYIA KRP D D
Sbjct: 116 QD-----LSAMLVHR-YDGMGYLEFNVKDDDFDTALNAVGAMPLPPYIAAKRPADDLDKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL LI++G+K+ +VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVWARASGAVAAPTASLHFEQWLLDDLIAMGVKISYVTLHVGAGTFVPVKVDDVADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+MHSE G + A A + + K+ GGR++ VGTT+ RL+ETA G + W G T+IFIT
Sbjct: 230 VMHSEWGQVSALAASDIMATKAAGGRVIPVGTTACRLIETAGAS-GTLVEWEGETDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G + K +Y HAI++ YRF+SYGD S+L
Sbjct: 289 PGFEFQITDGLMTNFHLPKSTLMMLVSALMGTQRIKDIYAHAIANEYRFFSYGDASILLP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|206561641|ref|YP_002232406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia J2315]
gi|238693122|sp|B4EE24|QUEA_BURCJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|198037683|emb|CAR53626.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Burkholderia cenocepacia
J2315]
Length = 355
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 197/361 (54%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V ++ P + D ++LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDRSV-EPARLVDRHFAELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 63 DTKVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F ++L I G +PLPPYI DA D YQT
Sbjct: 118 ------VTVGERVEPFFTLHFPAPCLDL---IEQYGRLPLPPYIEHD--PDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+V++ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPLLEQLDALGVERATLTLHVGAGTFQPVRVDNIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|271499567|ref|YP_003332592.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
dadantii Ech586]
gi|270343122|gb|ACZ75887.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
dadantii Ech586]
Length = 355
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 202/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIARYPQAQRSGCRLLSLDGPTGA---VAHGVFTDLLDKLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G +L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERMLDDKRVLAHVRASKAPKPGTVLLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + ++ ++ +G +PLPPYI RP +A D Y
Sbjct: 113 ES---VKATMLARHDALFEIQFDDTR--DVLTILNDIGHMPLPPYI--DRPDEAADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVEMAFVTLHVGAGTFQPVRVESIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A P+ G T IFI
Sbjct: 226 HAEYAEVPQTVVDAVLACKARGNRVIAVGTTSVRSLESAAQASAEAVIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G T Y+ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFVGYRHTMDAYRQAVAEQYRFFSYGDAMFITR 345
>gi|298208116|ref|YP_003716295.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Croceibacter atlanticus HTCC2559]
gi|83848037|gb|EAP85907.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Croceibacter atlanticus HTCC2559]
Length = 351
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 144/361 (39%), Positives = 197/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP + +A RP RD ARLMV++ I DL + +D +V
Sbjct: 3 MKLSNFGFDLPENLLADRPAENRDEARLMVLNRKEQT---IEHKQFKDLIDYFEPDDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++P W V P++ I+ G+ L+F
Sbjct: 60 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNPETRLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E +++ +G PLP YI R ++ D
Sbjct: 116 DDES---LVAEVIDNTTSRGRTLRFLYDGSYEEFRKKLKDLGETPLPKYIK--REVEPDD 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF PV+VED
Sbjct: 171 AERYQTIFAKEEGAVAAPTAGLHFSKHLLKRLEIKGINFAEVTLHVGLGTFNPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +I P + +N S RI +VGTT +R LE+A + G +N + G+TN F
Sbjct: 231 KHKMDSEEAYIAKPATEVVNKAISEKRRICAVGTTVMRTLESAVSSSGTLNEFGGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+ +AF G E T++ Y A+ Y FY+YGD L+
Sbjct: 291 IFPPYDFSIANCMVTNFHTPKSTLLMMTAAFAGHEFTQRAYAEAVKEKYNFYTYGDAMLI 350
Query: 357 F 357
Sbjct: 351 I 351
>gi|71899186|ref|ZP_00681349.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
gi|71731044|gb|EAO33112.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
Length = 347
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 144/359 (40%), Positives = 203/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RLM+V S P D V DLP L D +V
Sbjct: 2 LKKSDFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + + V R + +K G+ + +
Sbjct: 59 FNDTRVIPARLFGRKVS-----GGRVEVLIERFLGTHQAVVQLRTCRSLKVGNRILLDAG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L GE L+ LE+ +S VG +PLPPYI R D D Y
Sbjct: 114 GHAEVL-------GRDGEFYLLSFDVESPLEQWLSDVGQLPLPPYI--HREPDEYDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V +H+M
Sbjct: 165 QTVFARAVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PG
Sbjct: 225 HSEWFKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y R+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 284 YCIRSVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|94971507|ref|YP_593555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Koribacter versatilis Ellin345]
gi|94553557|gb|ABF43481.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Candidatus
Koribacter versatilis Ellin345]
Length = 366
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 139/369 (37%), Positives = 198/369 (53%), Gaps = 21/369 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +FD+ LPP IA P+ R + R+M V I + P L+ +D +VF
Sbjct: 4 LVSDFDYLLPPELIAQHPLADRSATRMMHVRRYGG--PEIDNLQFRSFPDLLSPDDLVVF 61
Query: 62 NNTKVITAQLNGVRFCHINRR------------EKEISCTLHMRVSPNS--WSVYARPSK 107
NNT+V+ A+L G R + + L ++ + W RP +
Sbjct: 62 NNTRVLPARLFGRRSGSRAQTLSPQNPASREFLTGRVEVLLTRQIQADPPVWQALVRPGR 121
Query: 108 VIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
+ G+ + F L A ++++ GE L F+ + ++ +G IPLPPYI
Sbjct: 122 KLGVGEKIFFGEDAEHPELTAEILERGEFGERTLRFT---GDFWGTVNRIGHIPLPPYI- 177
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
RP A D YQT +A+ GSVAAPTAGLHFT +L R+ + GI+ +TLHVG GTF
Sbjct: 178 -DRPDTAEDREQYQTIFARELGSVAAPTAGLHFTREILDRIAARGIETAELTLHVGLGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
P++ E+ +++ +H E I A A+ LN + G RIV+VGTT +R LE A +
Sbjct: 237 QPLRHENVEENHLHLERYSISADAAEKLNRARREGRRIVAVGTTIVRTLEFAAQQSKEFG 296
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
SG NIFI PGY FR V +++NFHLPKS+LLMLVSAF G + Y HA++ YRF
Sbjct: 297 EQSGDANIFIYPGYEFRVVGGMLTNFHLPKSSLLMLVSAFAGTSRALRAYNHAVAERYRF 356
Query: 348 YSYGDTSLL 356
+SYGD +
Sbjct: 357 FSYGDCMFI 365
>gi|329298298|ref|ZP_08255634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Plautia
stali symbiont]
Length = 356
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 205/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +D+ LN D +V
Sbjct: 1 MRVADFAFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LNHGVFTDVLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARVYGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + ++ VG +PLPPYI RP + D Y
Sbjct: 113 ES---VKATMVARHDALFEIEFADDR--AVLDILNSVGHMPLPPYI--DRPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL+ L + G+++ FVTLHVGA TF PV+VE+ +DHIM
Sbjct: 166 QTVYSARPGAVAAPTAGLHFDEPLLAALKAKGVEMAFVTLHVGASTFQPVRVENINDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG ++V+VGTTS+R LE+A +DG+I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVQACKARGNKVVAVGTTSVRSLESAAQACQDGLIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYQSAVAEQYRFFSYGDAMYITR 345
>gi|325103863|ref|YP_004273517.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pedobacter
saltans DSM 12145]
gi|324972711|gb|ADY51695.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pedobacter
saltans DSM 12145]
Length = 349
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 137/361 (37%), Positives = 191/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP S IA P RD +RLMV+H + I L D+ + + D ++
Sbjct: 1 MKLSQFKFHLPDSLIAHYPAETRDESRLMVLHKDTG---EIEHKLFKDVLGYFDDKDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + I +F + E + I ++G PLP YI R A D
Sbjct: 114 DDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRQNIEILGETPLPKYIK--RKPTAED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ L+ RL G++ VTLHVG GTF V+VED
Sbjct: 169 KERYQTIFAKNEGAVAAPTAGLHFSRELMKRLELKGVEFAEVTLHVGLGTFRQVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I A +N RI +VGTT +R +E+A + + P + +T+ F
Sbjct: 229 KHKMDSEQFIIAEKDANIVNKAIEEKRRICAVGTTVMRAVESAVSASRTLKPMNDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLLM+VSAF G E Y+ A+ YRFYSYGD L+
Sbjct: 289 IFPPYDFSIANSMITNFHTPESTLLMMVSAFGGYEHVMHAYEVAVKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|262341077|ref|YP_003283932.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blattabacterium sp. (Blattella germanica) str. Bge]
gi|262272414|gb|ACY40322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blattabacterium sp. (Blattella germanica) str. Bge]
Length = 347
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 203/361 (56%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF P + +A P RD ++LMV+H + L DL + DA++
Sbjct: 1 MRTSDFDFGSPLNLLAKFPSQERDESKLMVIHRKN---KKVEHKLFKDLHQYFEEGDALI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + E +I L + P +W V P++ ++ G+ L+F
Sbjct: 58 LNNTKVFPARLFGNK----EKTEAKIEVFLLRELDPKDRTWDVLVDPARKVRVGNKLNFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILL--VFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
L VID + +L F+ + EL +I +G PLP YI R + D
Sbjct: 114 YG-----LTGEVIDNTTSRGRILQLHFNGTHEELIIKIKELGKTPLPKYIN--RQPEKND 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +GSVAAPTAGLHF+ +LL +L GI + +TLH+G G+F+PV+VED
Sbjct: 167 EERYQTVYAKKEGSVAAPTAGLHFSKHLLKKLEIKGINLVEITLHLGLGSFLPVEVEDIS 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI+ T + +N + RI +VGT+S+R +E++ + + +NP+SG+TN F
Sbjct: 227 KHKMDSEKCFINEKTCEVINHAIQKKKRICAVGTSSMRAIESSVSSNKNLNPFSGWTNKF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH+PKSTLLM+ AF G + K YQ AI YRFYSYGD L+
Sbjct: 287 IFPPYNFSIANSMITNFHMPKSTLLMMTVAFAGFDLIMKAYQTAIQEKYRFYSYGDAMLI 346
Query: 357 F 357
Sbjct: 347 L 347
>gi|170746470|ref|YP_001752730.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium radiotolerans JCM 2831]
gi|238688890|sp|B1M584|QUEA_METRJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|170652992|gb|ACB22047.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium radiotolerans JCM 2831]
Length = 354
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 198/358 (55%), Positives = 247/358 (68%), Gaps = 11/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD+ R++VV P + D V DLP L + DA+V
Sbjct: 1 MRVDLFDFELPETSIALRPAEPRDAGRMLVVRPG----APLVDRTVRDLPDALRAGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+LNGVR + LH+R +P+ W +ARP+K + GD L F
Sbjct: 57 FNDTRVIPARLNGVRTRPGAP-GQRTEVMLHLREAPDRWRAFARPAKRLTAGDALRFGD- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV++K GEI+L F +G EL+ I+ G +PLPPYIA KR DARD DY
Sbjct: 115 -----LTATVLEKAEAGEIVLAFDRAGPELDAAIAAEGALPLPPYIAGKRATDARDATDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF+ LL+ L + G++ + VTLHVGAGTF+PVK EDTD H M
Sbjct: 170 QTVYARNPGAVAAPTAGLHFSDALLADLDAAGLQRHHVTLHVGAGTFLPVKAEDTDGHRM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+EIG +DA TA ALN+ ++ GGRIV+VGTT+LRLLE+A DG + P+SG T IFITPG
Sbjct: 230 HAEIGILDAATADALNAARAAGGRIVAVGTTALRLLESAARPDGTLAPFSGPTEIFITPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRAVD L++NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD SLLF
Sbjct: 290 YRFRAVDALVTNFHLPRSTLFMLVSAFSGLETMRAAYAHAIGAGYRFYSYGDASLLFP 347
>gi|288940036|ref|YP_003442276.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Allochromatium vinosum DSM 180]
gi|288895408|gb|ADC61244.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Allochromatium vinosum DSM 180]
Length = 343
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 136/359 (37%), Positives = 199/359 (55%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R +RL+V+ + + P D + +DLP+ L +D ++
Sbjct: 1 MRRSDFHYELPAELIAQHPLPERSGSRLLVLDGSQTPP---RDRMFTDLPSLLKPHDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L G + ++ + + + R SK K G +
Sbjct: 58 FNNTQVMRARLFGHKE-----TGGQVEILIERLLDAREALAHVRASKSPKPGSRIRVTDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L + Q++ G +PLPPYI RP D D Y
Sbjct: 113 A--------WLSVVGREGDLFRLRALESDFGEQMARHGHMPLPPYIQ--RPDDVLDESRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF +L+RL ++G+ +TLHVGAGTF PV+ +D + H M
Sbjct: 163 QTVFARRTGAVAAPTAALHFDEPMLARLDALGVARAEITLHVGAGTFQPVREDDLERHHM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D + + + GGR+++VGTTS+R LETA DG + P+ G + +FI PG
Sbjct: 223 HSEWLEVDETVCERIERTRQLGGRVIAVGTTSVRSLETAAA-DGRLRPFRGESRLFIRPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR VD +++NFHLP+STLLMLV+AF G E K Y+HAI YRF+SYGD L ++
Sbjct: 282 YRFRVVDAMITNFHLPESTLLMLVAAFSGYSEIMKAYRHAIDQRYRFFSYGDAMFLTRQ 340
>gi|167855507|ref|ZP_02478270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis 29755]
gi|167853373|gb|EDS24624.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis 29755]
Length = 361
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 132/362 (36%), Positives = 193/362 (53%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N D +DL ++S D ++
Sbjct: 1 MRVTDFHFDLPDELIARYPTAERSASRLLYLNGNTG---EYQDQQFNDLLEHIHSGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+ +
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHIRSSKAPKENAEIFLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + + + L + G +PLPPYI RP + D Y
Sbjct: 113 KLGEGNGFKAIMVARHDALFELKFEASQPLFDLLQQAGHMPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF +L +L G++ FVTLHVGAGTF PV+VE ++H M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDHQMLQKLQEKGVQTAFVTLHVGAGTFQPVRVETIEEHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + + + K++G R++ VGTTS+R +E+A E +I P+ T IF
Sbjct: 231 HAEYAEVSQEVVDKILATKAQGKRVICVGTTSVRSIESAAQAAEKEGKLIAPFYSDTAIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG FR VD L++NFHLP+STL+MLVSAF G + YQHA+ YRF+SYGD +
Sbjct: 291 LYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGFKNCMNAYQHAVESQYRFFSYGDAMFI 350
Query: 357 FQ 358
+
Sbjct: 351 TK 352
>gi|320450465|ref|YP_004202561.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
scotoductus SA-01]
gi|320150634|gb|ADW22012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
scotoductus SA-01]
Length = 344
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 154/360 (42%), Positives = 200/360 (55%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ +D+ LP IA V PRD AR++VVH P V DLP +L+ D +V
Sbjct: 1 MSLEAYDYFLPQELIAQEGVEPRDRARMLVVHRK--GPFRAEHRQVRDLPEYLHPGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN +KVI A+L R + L +P W P + K G L F S
Sbjct: 59 FNESKVIPARLLAQR-----PMGGRVEVLLVRERAPGLWEALVGPGRKAKPGTRLRFLSP 113
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V+ G LL F +L + VG +PLPPYI K P +
Sbjct: 114 RDLRVVPDLEAEVVGVEEDGVRLLRFQ---GDLMAHLEEVGEVPLPPYIKAKIPPE---- 166
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ GSVAAPTAGLHFT LL+RL +G+++ F+TLHVG GTF PVK D +
Sbjct: 167 -RYQTVYARRPGSVAAPTAGLHFTPELLARLRGMGVELRFLTLHVGPGTFRPVKG-DPEK 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E I TA+A+N K G R+V+VGTT +R LE+A E + P G T +FI
Sbjct: 225 HEMHPEPYEIPEETAEAINRAKKEGRRVVAVGTTVVRALESAFREGIGVVPGMGETRLFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F+ +D L +NFHLP+STLLMLV+AF G E+T + Y+ A++ YRFYS GD L+
Sbjct: 285 RPPYAFQVIDALFTNFHLPRSTLLMLVAAFLGYEKTMEAYRLAVAERYRFYSLGDAMLIL 344
>gi|327392946|dbj|BAK10368.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Pantoea ananatis AJ13355]
Length = 356
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 133/358 (37%), Positives = 200/358 (55%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +D+ L D +V
Sbjct: 1 MRVADFAFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LAHGVFTDVLDKLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + ++ VG +PLPPYI RP + D Y
Sbjct: 113 ES---VKATMVARHDALFEIAFEDDR--AVLDILNSVGHMPLPPYI--DRPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF L+ L G+++ FVTLHVGAGTF PV+VE ++H M
Sbjct: 166 QTVYSARPGAVAAPTAGLHFDEPLIQALKDKGVEMAFVTLHVGAGTFQPVRVETIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 226 HAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 286 PGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYRAAVAEEYRFFSYGDAMFI 343
>gi|134093583|ref|YP_001098658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Herminiimonas arsenicoxydans]
gi|166216726|sp|A4G1Z2|QUEA_HERAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|133737486|emb|CAL60529.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Herminiimonas
arsenicoxydans]
Length = 341
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 192/356 (53%), Gaps = 22/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P+ R ++RL+ V + D +D+ LN D +VFN
Sbjct: 4 LSDFDFELPQELIAQTPLAERSASRLLHV-----AQDGMIDRAFADIVDLLNPGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+ GV+ ++ + + R SK G +
Sbjct: 59 DTRVLKARFFGVKE-----TGGKVEVLVERVIDSAHVHAQIRASKSPVPGMKIRLAD--- 110
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ V ++ L ++ I G +PLPPYI DA D YQT
Sbjct: 111 --AFDVIVGERAGEFYEL----QFPGDIFALIEAHGRLPLPPYIEHA--ADAYDETRYQT 162
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK G+VAAPTAGLHF LL L + G++ +VTLHVGAGTF PV+ E+ +H MHS
Sbjct: 163 VYAKTPGAVAAPTAGLHFDQALLDTLKAKGVQFAYVTLHVGAGTFQPVRNENLAEHNMHS 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T A+++ ++ G IV+VGTTS+R LE+A+ G + S T +FITPGY
Sbjct: 223 EWYTISQETVGAVHAAQAAGHNIVAVGTTSMRALESASQS-GSLQAGSADTRLFITPGYT 281
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ V L++NFHLPKSTLLMLVSAF G + + YQHAIS YRF+SYGD L +
Sbjct: 282 FKTVTRLITNFHLPKSTLLMLVSAFAGYDAIRAAYQHAISQRYRFFSYGDAMFLTR 337
>gi|150009009|ref|YP_001303752.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
gi|255014841|ref|ZP_05286967.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_7]
gi|256840989|ref|ZP_05546496.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|262383900|ref|ZP_06077036.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
gi|298375758|ref|ZP_06985714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
gi|301312060|ref|ZP_07217982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
gi|166216734|sp|A6LEL6|QUEA_PARD8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149937433|gb|ABR44130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
gi|256736832|gb|EEU50159.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|262294798|gb|EEY82730.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
gi|298266795|gb|EFI08452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
gi|300830162|gb|EFK60810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
Length = 349
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 126/361 (34%), Positives = 184/361 (50%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +RLMVVH + I D+ + D +
Sbjct: 1 MKLSKFKFNLPSELIALHPAKNRDESRLMVVHRDTG---EIEHREFKDILDYYGKGDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGARIEVFLLRELNEDLRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP YI R ++ D
Sbjct: 114 EDDS---MVAEVIDNTTSRGRTLRFLYDGNHDEFKKALYALGETPLPKYIE--REVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ +A +G+V AP AGLHF+ L+ RL + F+TLH G G F + VED
Sbjct: 169 EDRYQNIFAAEEGAVVAPAAGLHFSRELMKRLEIKDCQFAFLTLHSGLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ++A +N K G ++ +VGT+ +R +ETA + DG + + G+TN F
Sbjct: 229 KHKMDSEQMVVNADVVDIVNKGKDEGHKVCAVGTSVMRAIETAVSTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F +++NFH+P STLLM+ ++F G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVATSMVTNFHMPLSTLLMMTASFGGYELIMDAYDIALKEKYRFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|170703127|ref|ZP_02893943.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria IOP40-10]
gi|170131960|gb|EDT00472.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria IOP40-10]
Length = 416
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 194/361 (53%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V P + D ++LP+ + D +VFN
Sbjct: 65 LSDFDFNLPPELIAQTALPERTASRLLEVDR-TVEPARLVDRNFAELPSCIAPGDLLVFN 123
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+ G + +I + ++ R SK G L
Sbjct: 124 DTRVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADAFD 178
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F + L I G +PLPPYI DA D YQT
Sbjct: 179 ------VTVGERVEPFFTLHFPQPCLTL---IEQHGRLPLPPYIEHD--ADANDETRYQT 227
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 228 VYASNPGAVAAPTAGLHFDLPLLEQLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMHS 287
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + T+IFIT
Sbjct: 288 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 347
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 348 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLLTR 407
Query: 359 K 359
+
Sbjct: 408 R 408
>gi|297172494|gb|ADI23466.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured nuHF1 cluster bacterium
HF0770_35I22]
Length = 349
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 164/361 (45%), Positives = 225/361 (62%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IA +P PR+SA+L+ V D + DLPA L + D +V
Sbjct: 1 MKTSNFDFSLPPELIAQKPARPRESAKLLQV----FSDGNFRDVYIKDLPALLKAGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI AQL+G F EK++ LH + S W +A+P+K + D + F
Sbjct: 57 VNNTRVIPAQLSGKIFS----TEKKVRVNLHKQKSNGVWLAFAKPAKKLLLNDKIFF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
S A + DK G+I L F++ G + + G++PLPPYI R + D DY
Sbjct: 110 --SSTFFALITDKQPFGQITLKFNLVGATFLKALKKFGSMPLPPYIKRSGKVHPSDKTDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTT+A G+VA+PTAGLHF+ NL++ L GI+V +TLHVGAGTF+P+K + + H M
Sbjct: 168 QTTFASRDGAVASPTAGLHFSMNLINDLKRCGIRVAPITLHVGAGTFLPIKTDTINHHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+A TA +N + GG+I++VGTT LR LETA +G I+P+ G T+IFI PG
Sbjct: 228 HSEWVEINARTANLINKTRKAGGKIIAVGTTVLRTLETAVDTEGNIHPFKGKTDIFIAPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL-FQK 359
++F+ VD+L++NFHLPKSTL +LVSAFCG+ K Y++AI YRF+SYGD SLL +K
Sbjct: 288 HQFKTVDLLITNFHLPKSTLFVLVSAFCGLNRMKNAYKYAIKKKYRFFSYGDASLLELRK 347
Query: 360 R 360
+
Sbjct: 348 K 348
>gi|124268920|ref|YP_001022924.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Methylibium petroleiphilum
PM1]
gi|124261695|gb|ABM96689.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Methylibium petroleiphilum
PM1]
Length = 355
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 196/358 (54%), Gaps = 14/358 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V +FDF LPP IA P R +RL+ D +LP+ L+ D +VFN
Sbjct: 11 VADFDFALPPELIAQHPAPERSGSRLL-----DGRGDAPLDRRFRELPSLLSPGDLLVFN 65
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + E + L + + R SK + G +HF +DG
Sbjct: 66 DTRVIKARLYGRKASGGG-VEALVERVL---PGTHEVWAHLRASKSPRPGSRVHFAGRDG 121
Query: 123 QS-RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
S +A V+ + L + G G +PLPPYI D YQ
Sbjct: 122 GSTAFDAEVLGRCGPDGSLFHLRLPGDPFALL-ERHGHVPLPPYIEHGDDADDER--RYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTA LHF + +L+ L + G+ VTLHVGAGTF PV+VE +H MH
Sbjct: 179 TVFARAPGAVAAPTAALHFDAEVLAALEAQGVARASVTLHVGAGTFQPVRVEQLAEHRMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + T A+ ++ GGR+V+VGTT+LR LE+A G + + T+IFITPG+
Sbjct: 239 SEWFELPGATVDAIARTRAAGGRVVAVGTTTLRALESAAL-GGELQAGARETDIFITPGF 297
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
FR VD L++NFHLP+STL+MLVSAF G E + +Y HAI YRF+SYGD LL ++
Sbjct: 298 TFRVVDRLLTNFHLPRSTLMMLVSAFAGHERIRTLYTHAIRERYRFFSYGDAMLLQRR 355
>gi|291616515|ref|YP_003519257.1| QueA [Pantoea ananatis LMG 20103]
gi|291151545|gb|ADD76129.1| QueA [Pantoea ananatis LMG 20103]
Length = 367
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 133/358 (37%), Positives = 200/358 (55%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +D+ L D +V
Sbjct: 12 MRVADFAFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LAHGVFTDVLDKLQPGDLLV 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 69 FNNTRVIPARVFGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGDD 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + ++ VG +PLPPYI RP + D Y
Sbjct: 124 ES---VKATMVARHDALFEIAFEDDR--AVLDILNSVGHMPLPPYI--DRPDEEADRELY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF L+ L G+++ FVTLHVGAGTF PV+VE ++H M
Sbjct: 177 QTVYSARPGAVAAPTAGLHFDEPLIQALKDKGVEMAFVTLHVGAGTFQPVRVETIEEHHM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 237 HAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 296
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 297 PGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYRAAVAEEYRFFSYGDAMFI 354
>gi|124007246|ref|ZP_01691954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
gi|123987276|gb|EAY27005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
Length = 350
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 131/361 (36%), Positives = 192/361 (53%), Gaps = 15/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FD P +AL P RD +RLMV+H + I + D+ + + D V
Sbjct: 1 MKLSEFKFDFPTDLLALHPTDNRDESRLMVIHRDSG---KIEHKVFKDIVDYFDEGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + +I L ++ + W V P++ I+ G+ L F
Sbjct: 58 VNDTKVFPARLFGSK----EKTGAQIEVFLLRELNQEAHLWDVLVDPARKIRVGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVF--SISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G L A VID + + F S E + I +G PLP +I ++R DA D
Sbjct: 113 ---GNGELVAEVIDNTTSRGRTIRFLTDRSDEEFYQLIDELGETPLPKHIYQQRKTDAHD 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +A+ G+VAAPTAGLHFT L+ RL GI + VTLH+G GTF V VED
Sbjct: 170 RERFQTIFAEHVGAVAAPTAGLHFTKQLIKRLELKGIDMTPVTLHIGLGTFRDVDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE + A T +N + R+ ++GTT ++ LE++ + + ++ +G+++ F
Sbjct: 230 KHKADSENFSVPANTTDKVNDALANKKRVCAIGTTVVKALESSVSANSLLKENAGWSDKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + L++NFHLP+STLLM AF G E YQ A+ YRF+SYGD L+
Sbjct: 290 IFPPYEFKIPNALVTNFHLPESTLLMTACAFGGYELIMDAYQVAVKEKYRFFSYGDAMLI 349
Query: 357 F 357
Sbjct: 350 L 350
>gi|46199001|ref|YP_004668.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB27]
gi|55981027|ref|YP_144324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB8]
gi|81567700|sp|Q72JS5|QUEA_THET2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81600605|sp|Q5SMH0|QUEA_THET8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56966767|pdb|1WDI|A Chain A, Crystal Structure Of Tt0907 From Thermus Thermophilus Hb8
gi|46196625|gb|AAS81041.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB27]
gi|55772440|dbj|BAD70881.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB8]
Length = 345
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 198/358 (55%), Gaps = 19/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LPP +IA V PRD ARLMVV+ P ++ V DLP FL D +VFN
Sbjct: 4 LEAYDYHLPPEQIAQEGVEPRDMARLMVVYRE--GPFRVAHKRVRDLPEFLRPGDVLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+KVI A+L + ++ L SP W P++ G L S
Sbjct: 62 ESKVIPARLLARK-----PTGGKVEILLVRERSPGLWEALLGPARKAPPGTRLLLLSPKD 116
Query: 123 QS---RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L+A V+ G LL F +L + VG +PLPPYI
Sbjct: 117 LAPVPGLQAEVVAVEEDGVRLLRFQ---GDLVAHLEEVGEVPLPPYIKA-----KIPMER 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ GSVAAPTAGLHFT LL RL +G+++ F+TLHVG GTF PVK D + H
Sbjct: 169 YQTVYARRPGSVAAPTAGLHFTPELLERLREMGVELRFLTLHVGPGTFRPVKG-DPEKHE 227
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E I A+A+N K+ G R+V+VGTT +R LE+A E + G T +FI P
Sbjct: 228 MHAEPYAIPEEVAEAVNRAKAEGRRVVAVGTTVVRALESAYREGVGVVAGEGETRLFIRP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD L +NFHLP+STLLMLV+AF G E T + Y+ A++ YRFYS GD L+
Sbjct: 288 PYTFKVVDALFTNFHLPRSTLLMLVAAFLGRERTLEAYRLAVAEGYRFYSLGDAMLIL 345
>gi|30249127|ref|NP_841197.1| queuosine biosynthesis protein [Nitrosomonas europaea ATCC 19718]
gi|46576993|sp|Q82VF1|QUEA_NITEU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|30180446|emb|CAD85051.1| Queuosine biosynthesis protein [Nitrosomonas europaea ATCC 19718]
Length = 353
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 204/357 (57%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ R +R++ V+ + D +LP +L D IV
Sbjct: 10 MKTDDFDFHLPDELIAQFPLANRSDSRMLYVN---GKHADLRDAAFRNLPDYLKRGDVIV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ ++ + + + V R S + G L
Sbjct: 67 LNNTRVVKARLSGVKS-----TGGKVEVMVERILDTHRARVLIRASHALVIGSTL-LLEN 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+++EA D + + + L + G PLPPYI R D Y
Sbjct: 121 KITAQVEAREQDIYTLCFM------HSLPLIELLDQFGHTPLPPYI--GRNATVSDENRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +L L ++G+K+ +VTLHVGAGTF PV+V++ D H+M
Sbjct: 173 QTVFAQESGAVAAPTAGLHFDETMLQTLRTLGVKIIYVTLHVGAGTFQPVRVQNIDQHVM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
H+E I T +A+ KS GG +++VGTTSLR LE+ T DG + +G TN+FITP
Sbjct: 233 HTEPYHIPTETVEAIQMCKSAGGSVLAVGTTSLRALESCMLTNDGTLVAGAGETNLFITP 292
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+RFR VD L++NFHLP+STLLMLVSAF G+E + Y+HAI + YRF+SYGD L+
Sbjct: 293 GFRFRIVDRLLTNFHLPRSTLLMLVSAFAGMETIRHAYRHAIDNHYRFFSYGDAMLI 349
>gi|56751764|ref|YP_172465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus elongatus PCC 6301]
gi|81561754|sp|Q5N175|QUEA_SYNP6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56686723|dbj|BAD79945.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus elongatus PCC 6301]
Length = 359
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 189/358 (52%), Gaps = 14/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D++LPP RIA V PRD ARL V + DLP L D ++
Sbjct: 10 HLDAYDYELPPDRIAQSAVEPRDHARLSVFP----DREQLWHRHFYDLPQLLRPGDLLIV 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L P W +P K +K G + F
Sbjct: 66 NDTRVIPARLYGQKI----ETGVPVEVLLVEEHGPGYWLTLVKPGKRLKPGSAIAFGPNP 121
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V TG L F Q++ +G +PLPPYI A D Y
Sbjct: 122 EDPLLVADVEASDPATGGRWLRFRGEAEAFWSQLATLGEMPLPPYIHTT----ASDPERY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHFT LL+ L +GI VTLHVG GTF V VED H M
Sbjct: 178 QTVYSRELGAVAAPTAGLHFTPELLTTLADMGIATAPVTLHVGIGTFRSVDVEDIRQHEM 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T + + + K+ GGR+++VGTTS+R +E A G + P S N+FI PG
Sbjct: 238 HSERMMVPAATVEKIQATKAAGGRVIAVGTTSVRAIEGAAAS-GELKPGSDRVNLFIYPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YR++ +D L++NFHLP+S+L+MLVSA G + Y AI+ YRFYS+GD L+
Sbjct: 297 YRWQIIDGLITNFHLPRSSLMMLVSALIGRDRLLSAYATAIAEQYRFYSFGDAMLILP 354
>gi|305664560|ref|YP_003860847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Maribacter
sp. HTCC2170]
gi|88708577|gb|EAR00813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Maribacter
sp. HTCC2170]
Length = 349
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 203/361 (56%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ++LMV+H I + DL + + D +V
Sbjct: 1 MKLSHFNFELPNDLLAEYPAENRDESKLMVIHRETG---KIEHKMFKDLINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + R++ +G PLP YI R ++ D
Sbjct: 114 EDES---LVAEVIDNTTSRGRTLRFLYDGSYTDFRRKLRELGQTPLPKYIK--RDVEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL G+ +TLHVG GTF PV+VED
Sbjct: 169 ETRYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGVDFAELTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID + +N+ KS ++ +VGTT++R LE+A + + +N ++G+TN F
Sbjct: 229 KHKMDSEELIIDEKATEIVNNAKSNKRKVCAVGTTAMRGLESAVSSEHTLNTFNGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ P Y F + +++NFHLPKSTLLM+VSAF G + KK Y+ AI +Y+FYSYGD L+
Sbjct: 289 VFPPYEFSIANCMVTNFHLPKSTLLMMVSAFIGHDLMKKAYKEAILESYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|162146698|ref|YP_001601157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
gi|189038525|sp|A9HBI8|QUEA_GLUDA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161785273|emb|CAP54819.1| putative s-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 355
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 165/355 (46%), Positives = 217/355 (61%), Gaps = 14/355 (3%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+FDFDLPP+ IA P PRDSARL+ ++ D +V DLP+ L D +V N+
Sbjct: 6 SDFDFDLPPALIAEHPARPRDSARLL----DIPAAGPFHDRIVRDLPSLLRPGDLLVAND 61
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T VI AQL+ R E I TL + +W AR ++ ++ GD+L F
Sbjct: 62 TAVIPAQLDARR------GEARIGITLDRILPDGTWHALARNARRLRAGDVLTFPGTPN- 114
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
A VI + + G ++L F G + + G + LPPYIAR +D VDY T
Sbjct: 115 ---TAAVISRDDEGGVVLRFDTEGAAFDAFLQAAGVLALPPYIARPFGPTEQDRVDYATI 171
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
++ +G+VAAPTAGLHFT +LL+ L + G+ +TLHVGAGTF+PV+ + H MH+E
Sbjct: 172 FSAHRGAVAAPTAGLHFTPDLLAALDAAGVGRCTLTLHVGAGTFLPVRGDSIAAHRMHAE 231
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
G I A TA A+N+ + GGRIV+VGTTSLRLLE+A DG I P+ G T IFI PGYRF
Sbjct: 232 RGVITAETADAINAARRAGGRIVAVGTTSLRLLESAADPDGTIRPFDGDTAIFIRPGYRF 291
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RAVD+LM+NFHLP+STL MLV AF G + + Y HA++ YRFYSYGD LL +
Sbjct: 292 RAVDVLMTNFHLPRSTLFMLVCAFAGYDRMRDAYAHAVADGYRFYSYGDACLLHR 346
>gi|219870890|ref|YP_002475265.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis SH0165]
gi|254764279|sp|B8F4R5|QUEA_HAEPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219691094|gb|ACL32317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis SH0165]
Length = 361
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 132/362 (36%), Positives = 193/362 (53%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N D +DL ++S D ++
Sbjct: 1 MRVTDFHFDLPDELIARYPTAERSASRLLYLNGNTG---EYQDQQFNDLLEHIHSGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+ +
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHIRSSKAPKENAEIFLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + + + L + G +PLPPYI RP + D Y
Sbjct: 113 KLGEGNGFKAIMVARYDALFELKFEASQPLFDLLQQAGHMPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF +L +L G++ FVTLHVGAGTF PV+VE ++H M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDHQMLQKLQEKGVQTAFVTLHVGAGTFQPVRVETIEEHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + + + K++G R++ VGTTS+R +E+A E +I P+ T IF
Sbjct: 231 HAEYAEVSQDVVDKILATKAQGKRVICVGTTSVRSIESAAQAAEKEGKLIAPFYSDTTIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG FR VD L++NFHLP+STL+MLVSAF G + YQHA+ YRF+SYGD +
Sbjct: 291 LYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGFKNCMNAYQHAVESQYRFFSYGDAMFI 350
Query: 357 FQ 358
+
Sbjct: 351 TK 352
>gi|254423170|ref|ZP_05036888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7335]
gi|196190659|gb|EDX85623.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7335]
Length = 374
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 128/359 (35%), Positives = 191/359 (53%), Gaps = 14/359 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + + LP RIA PV PRD ++L+V+ P +L +L D ++F
Sbjct: 22 QLSAYSYLLPEGRIAQNPVTPRDHSKLLVIDG----PQSHRHSHFYNLGDWLMPGDLLIF 77
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + L + W RP + I G + F
Sbjct: 78 NDTKVIPARLYGQKVS-----GASVEVLLIEPTVDDRWLALVRPGRRIPPGTEIVFGDSA 132
Query: 122 GQ-SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D+ G I+ + ++ I +G +PLPPYI + Y
Sbjct: 133 QPLMSALVESRDESTGGRIIRLLPKVDKTIDALIHQLGQMPLPPYITESTSL----PEQY 188
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ QG++AAPTAGLHFT +LL +L + GI+ +TLHVG GTF PV+V D + H M
Sbjct: 189 QTVFAQKQGAIAAPTAGLHFTQSLLDKLNAKGIQTAEITLHVGIGTFRPVEVSDIETHEM 248
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A T + + K+ GGR+++VGTTS R LE G + P+ G T++FI PG
Sbjct: 249 HKERIEVSAETVKRIKKTKANGGRVITVGTTSTRALEGVAAICGELQPYRGKTDLFIYPG 308
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y+++ +D +++NFHLP S+LLM++SA G + +YQ AI YRFYS+GD L+ +
Sbjct: 309 YQWQVIDGMITNFHLPGSSLLMMISALVGRKRLMTVYQAAIEQDYRFYSFGDAMLILPE 367
>gi|323464269|gb|ADX76422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus pseudintermedius ED99]
Length = 341
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 210/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+ LP S IA P+ RD +RL+ ++ + D D+ F D +V
Sbjct: 1 MNIEEFDYVLPESLIAQTPLKQRDQSRLLYLNRDTGET---EDLHFKDITRFFQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ + W V +P+K IK G L F
Sbjct: 58 LNDTRVMPARLFGIK----EETNAKVEMLMLTQIEGDDWEVLLKPAKRIKLGQTLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +++AT I + + G ++ S GI L+ ++ +G +PLPPYI + + Y
Sbjct: 111 -GEGKIKATCIKELDQGGRIMRLSYEGI-LQERLDELGEMPLPPYIKER----LDEKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ F+TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKAAGSAAAPTAGLHFTDALLDDIRRQGVQIAFITLHVGLGTFRPVSVDHIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K+ G RI+SVGTTS R LET T+ SG+TNIFI PG
Sbjct: 225 HSEYYQMSQETADILNQTKAAGHRIISVGTTSTRTLETIRTQFDTFQATSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y HA++ YRF+S+GD ++
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSRQFVLSAYHHAVAEKYRFFSFGDAMIII 341
>gi|39935671|ref|NP_947947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris CGA009]
gi|39649524|emb|CAE28046.1| S-adenosylmethionine tRNA ribosyltransferase [Rhodopseudomonas
palustris CGA009]
Length = 364
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 192/361 (53%), Positives = 246/361 (68%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P + D +V DLPA L D +V
Sbjct: 5 MRTELFDFDLPAENIALRPVSPRDAARMLVVRPG----APLEDRIVRDLPALLAPGDQLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E +I TL R+ W +P+K + GD++ F
Sbjct: 61 VNDTRVIAAQLTGRRIGRG--LEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRFGHD 118
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K + GE+ LVFS G L++ I+ VG PLPPYIA KR DA+D
Sbjct: 119 GRVCLLGHLDATVEAKGDAGEVTLVFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQDI 178
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT +
Sbjct: 179 ADYQTMFASNEGAVAAPTAGLHFTAELETALAACGVGLHRITLHVGAGTFLPVKAEDTSE 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+IFI
Sbjct: 239 HRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSIFI 298
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SLLF
Sbjct: 299 TPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASLLF 358
Query: 358 Q 358
+
Sbjct: 359 R 359
>gi|293611107|ref|ZP_06693406.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826759|gb|EFF85125.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 345
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 124/363 (34%), Positives = 186/363 (51%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLLQLD----SKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L +
Sbjct: 57 LNDTKVMKARLKGKRS-----TGGAIEILVERMLNHTTAYCHIKSSNSPKAGAELFVGAD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + + G +P+PPY R + D Y
Sbjct: 112 NIPVIVRGRHEN--------LFVVEFSQPILPVLEQYGQLPIPPYFN--REAEEIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L ++ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLEQKNVQKSFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG +++++GTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAIGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSYGDAMLID 341
Query: 358 QKR 360
+ +
Sbjct: 342 KLK 344
>gi|91207399|sp|Q6N6L0|QUEA_RHOPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 360
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 192/361 (53%), Positives = 246/361 (68%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P + D +V DLPA L D +V
Sbjct: 1 MRTELFDFDLPAENIALRPVSPRDAARMLVVRPG----APLEDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLTGRRIGRG--LEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRFGHD 114
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K + GE+ LVFS G L++ I+ VG PLPPYIA KR DA+D
Sbjct: 115 GRVCLLGHLDATVEAKGDAGEVTLVFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQDI 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT +
Sbjct: 175 ADYQTMFASNEGAVAAPTAGLHFTAELETALAACGVGLHRITLHVGAGTFLPVKAEDTSE 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+IFI
Sbjct: 235 HRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SLLF
Sbjct: 295 TPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASLLF 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|86609129|ref|YP_477891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557671|gb|ABD02628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 392
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 141/376 (37%), Positives = 200/376 (53%), Gaps = 28/376 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +D+ LPP +IA PV PRD AR++VV+P+ LP +L D +V
Sbjct: 27 LLTASYDYTLPPDQIAQTPVEPRDQARMLVVYPDR-----HEHRRFCHLPDYLREGDLLV 81
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-------------WSVYARPSK 107
N+TKVI A+L G + + L W V RP K
Sbjct: 82 LNDTKVIPARLFGAK----EPSGARVEVLLLEPCLEGIPAAAQPLPDQAWSWRVLVRPGK 137
Query: 108 VIKKGDILHFFSQDGQS---RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPP 164
+K GD + F+S+ G R +D G ++ E + VG IPLPP
Sbjct: 138 RVKVGDRIGFWSKQGSPSGLRATVLALDPETGGRVVQFEWEGAQPFEEILEQVGRIPLPP 197
Query: 165 YIARKRPIDARD--YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
YI + DYQT +AK GSVAAPTAGLHFT LL RL GI+ ++TL++
Sbjct: 198 YIKASGSPGSGQVRPEDYQTLWAKHPGSVAAPTAGLHFTQELLERLAQKGIQTAYITLNI 257
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
G GTF PV+ E +H +HSE + A T A+ ++RGGR+++VGTT +R LETA
Sbjct: 258 GLGTFRPVEAERVTEHRLHSEWLKVPAETVAAIQKAQARGGRVIAVGTTVVRSLETAAAS 317
Query: 283 DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
G + PW G +++FI PGY +R + L++NFHLP+S+L+MLV+A G + +Y+ A+
Sbjct: 318 -GTLQPWQGKSDLFIYPGYSWRVIQGLVTNFHLPRSSLMMLVAALIGRQRLLDLYREAVD 376
Query: 343 HAYRFYSYGDTSLLFQ 358
YRFYS+GD L+
Sbjct: 377 QGYRFYSFGDGMLILP 392
>gi|209543312|ref|YP_002275541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
gi|209530989|gb|ACI50926.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 355
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 165/355 (46%), Positives = 217/355 (61%), Gaps = 14/355 (3%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+FDFDLPP+ IA P PRDSARL+ ++ D +V DLP+ L D +V N+
Sbjct: 6 SDFDFDLPPALIAEHPARPRDSARLL----DIPAAGPFHDRIVRDLPSLLRPGDLLVAND 61
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T VI AQL+ R E I TL + +W AR ++ ++ GD+L F
Sbjct: 62 TAVIPAQLDARR------GEARIGITLDRILPDGTWHALARNARRLRAGDVLTFPGTPN- 114
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
A VI + + G ++L F G + + G + LPPYIAR +D VDY T
Sbjct: 115 ---TAAVISRDDEGGVVLRFDTEGAAFDAFLQAAGVLALPPYIARPFGPTEQDRVDYATI 171
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
++ +G+VAAPTAGLHFT +LL+ L + G+ +TLHVGAGTF+PV+ + H MH+E
Sbjct: 172 FSAHRGAVAAPTAGLHFTPDLLAALDAAGVGRCTLTLHVGAGTFLPVRGDSIAAHRMHAE 231
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
G I A TA A+N+ + GGRIV+VGTTSLRLLE+A DG I P+ G T IFI PGYRF
Sbjct: 232 RGVITAETADAINAARRAGGRIVAVGTTSLRLLESAADPDGTIRPFDGDTAIFIRPGYRF 291
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RAVD+LM+NFHLP+STL MLV AF G + + Y HA++ YRFYSYGD LL +
Sbjct: 292 RAVDVLMTNFHLPRSTLFMLVCAFAGYDRMRDAYAHAVADGYRFYSYGDACLLHR 346
>gi|184159481|ref|YP_001847820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ACICU]
gi|294842533|ref|ZP_06787216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. 6014059]
gi|238690996|sp|B2HYN4|QUEA_ACIBC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|183211075|gb|ACC58473.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Acinetobacter baumannii ACICU]
gi|322509394|gb|ADX04848.1| queA [Acinetobacter baumannii 1656-2]
gi|323519415|gb|ADX93796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii TCDC-AB0715]
Length = 345
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 128/359 (35%), Positives = 184/359 (51%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFVGED 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + + G +P+PPY R + D Y
Sbjct: 112 NIPVIVRGRHEN--------LFVVEFSQPILPVLEQYGQLPIPPYFN--REAEEIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|23016644|ref|ZP_00056398.1| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase) [Magnetospirillum magnetotacticum
MS-1]
Length = 345
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 180/358 (50%), Positives = 231/358 (64%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA RPV PRDSARL+ V +SD V DLP L D +V
Sbjct: 1 MRVDDFDFELPRELIAERPVCPRDSARLLHVP----IIGGLSDRGVRDLPDLLMPGDILV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G R + TLH R W +ARP+K ++ GD + F
Sbjct: 57 FNDTKVIPARLFGRRGT------AGVEVTLHQRTGLAQWKAFARPAKKLRPGDRVDFAEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV +K GE+ L F SG +L + G++PLPPYI + D RD DY
Sbjct: 111 -----FFATVAEKGEMGEVTLDFDRSGEDLMVALEAFGSLPLPPYIRKGE-ADERDRGDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +LL+ L + G+K VTLHVGAGTF+PVK +DT+DH M
Sbjct: 165 QTVFARQKGAVAAPTAGLHFTPDLLAALDARGVKRATVTLHVGAGTFLPVKADDTNDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H EIG I TA A+N+ K+ GGR+V+VGTTS RLLE+A GI++P+ G T+IFITPG
Sbjct: 225 HQEIGVITPETAAAINAAKAAGGRVVAVGTTSARLLESAADPLGILHPFDGATDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ FR D+L++NFHLP+STL MLVSAF G+ K+ Y+HA + YRFYSYGD LL +
Sbjct: 285 HSFRLADVLLTNFHLPRSTLFMLVSAFSGLSRMKEAYEHAKAAGYRFYSYGDCCLLER 342
>gi|171058260|ref|YP_001790609.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Leptothrix
cholodnii SP-6]
gi|170775705|gb|ACB33844.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Leptothrix
cholodnii SP-6]
Length = 356
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 195/356 (54%), Gaps = 9/356 (2%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V +FDFDLPP IA P R +RL+ + S P D + +LP LN D +VFN
Sbjct: 7 VADFDFDLPPELIAQHPAPERSGSRLL----DASAPAQPVDRIFHELPGLLNPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + + + R SK + G + F + G
Sbjct: 63 DTQVIRARLFGAKDSGGAVEALVERVLPAAAGGGHEVWAHLRASKSPRAGQSVLFRNDQG 122
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + A V+ + + L G +PLPPYI D YQT
Sbjct: 123 E-QFSADVLGRCGPEDSLFHLRFPSDAFALL-ERYGHVPLPPYITHADEADDVR--RYQT 178
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF PV+V+ D H MHS
Sbjct: 179 VFARHPGAVAAPTAALHFDEALLAALEARGVRRASVTLHVGAGTFQPVRVDRLDQHRMHS 238
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + T A+ + ++ GG++V+VGTT+LR LE+A G++ + T+IFITPG+
Sbjct: 239 EWFEVPQATVDAIAATRAAGGKVVAVGTTTLRALESAAR-GGVLRAGAQETDIFITPGFA 297
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ VD L++NFHLPKSTLLMLVSAF G +Y+HAIS YRF+SYGD LL +
Sbjct: 298 FQVVDRLVTNFHLPKSTLLMLVSAFAGHATMHALYRHAISRGYRFFSYGDAMLLTR 353
>gi|239501681|ref|ZP_04660991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB900]
gi|238685530|sp|A3M8S1|QUEA_ACIBT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193078344|gb|ABO13315.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 17978]
Length = 345
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 128/359 (35%), Positives = 185/359 (51%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L +
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFVGAD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + + G +P+PPY R + D Y
Sbjct: 112 NIPVIVRGRHEN--------LFVVEFSQPILPVLEQYGQLPIPPYFN--REAEEIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|258514406|ref|YP_003190628.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfotomaculum acetoxidans DSM 771]
gi|257778111|gb|ACV62005.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfotomaculum acetoxidans DSM 771]
Length = 333
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 129/344 (37%), Positives = 189/344 (54%), Gaps = 17/344 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++F+++LP IA P RD +RLMV+ + I ++L +L D +V
Sbjct: 3 LKLEDFNYNLPEELIAQEPSANRDESRLMVLFRDN---PQIEHRRFNNLVEYLKPGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G++ + L ++ N W +P + + G L F
Sbjct: 60 INDTKVMPARLYGLKD-----TGATVEVLLLKQLDGNRWETLVKPGRKARIGTTLTFAG- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L V G ++ F G + +G +PLPPYI + D Y
Sbjct: 114 ---GKLTGLVAGDTEAGGRVIDFLYQG-SFVEILEQIGIMPLPPYIKKI----PADPGRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GS AAPTAGLHFT LL ++ +G+++ V LHVG TF PVKVE+ +H M
Sbjct: 166 QTVYANRFGSAAAPTAGLHFTDQLLDKIKDLGVEIVPVLLHVGLDTFRPVKVENIREHRM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A A +N+ K+RGGRI++VGTT+ R LE++ +DG + SG+T IFI PG
Sbjct: 226 HSEYYEISAGVADKINAAKARGGRIIAVGTTTTRCLESSAGDDGRLKTGSGWTKIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
YRF+ +D L++NFHLP STL+MLVSA G ++ + Y A+
Sbjct: 286 YRFKIIDGLITNFHLPCSTLIMLVSALSGRDKILEAYNTAVKKK 329
>gi|294013326|ref|YP_003546786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sphingobium
japonicum UT26S]
gi|292676656|dbj|BAI98174.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sphingobium
japonicum UT26S]
Length = 344
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 184/358 (51%), Positives = 230/358 (64%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PR SARL++ + D +V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPESIALRPASPRHSARLLLAAGD----APFQDRIVRDLPGLLRPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + +I TLH R+ W + R +K ++ GD + F +
Sbjct: 57 FNDTKVIPAQLEGMR------GQAKIGATLHKRLGLRQWQAFLRNAKRVRDGDRIDFGNG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + G ++L F +E + G +PLPPYIA KRP D RD DY
Sbjct: 111 -----VTAVAGPRDEEGGVMLRFE-GEEPVELLLERAGRMPLPPYIASKRPTDERDRSDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFT L++ + GI +TLHVGAGTF+PVK EDTDDH M
Sbjct: 165 QTMFAREDGAVAAPTAALHFTPELMTAIEKAGIGTETLTLHVGAGTFLPVKAEDTDDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G ID TA LN+ ++ GGR+++VGTTSLRLLE+AT EDGII P+ T IFITPG
Sbjct: 225 HAEWGRIDQATAGRLNAARAAGGRLIAVGTTSLRLLESATGEDGIIRPFEDETRIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRAVD LM+NFHLPKSTL MLVSA G E+ + +Y+HAI YRFYSYGD+SLL
Sbjct: 285 YRFRAVDGLMTNFHLPKSTLFMLVSALMGTEKMQSVYRHAIDGGYRFYSYGDSSLLLP 342
>gi|148653721|ref|YP_001280814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychrobacter sp. PRwf-1]
gi|172048561|sp|A5WGS3|QUEA_PSYWF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148572805|gb|ABQ94864.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Psychrobacter sp. PRwf-1]
Length = 390
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 145/370 (39%), Positives = 197/370 (53%), Gaps = 24/370 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V ++D+DLP IA P+ R ++RLM + VI D SDLP L + D IVFN
Sbjct: 29 VADYDYDLPDEYIARYPLAERSASRLMYLPAQKENTAVIQDRQFSDLPELLQAGDLIVFN 88
Query: 63 NTKVITAQLNGVRFCHINRR--------EKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
+TKV+ A+L G + + E + + N + R SK K G
Sbjct: 89 DTKVMKARLFGQKDTGGKVEVLVERLTDDTEFTTDESGQSFDNVALCHVRASKAPKLGQR 148
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L G +E +I + IL + +L G +P+PPY R D
Sbjct: 149 LVL----GDGNIECVMIGRHENLFILSFKNPILPDL----EQYGELPIPPYFE--RHADE 198
Query: 175 RDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D V YQT + SVAAPTA LHF +L +L GI +VTLHVGAGTF PVK
Sbjct: 199 TDNVRYQTVFHDPTKLASVAAPTASLHFDDKVLKQLADKGINTAYVTLHVGAGTFAPVKT 258
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA----TTEDGIINP 288
++ +H MHSE + TA +N G +++++GTT R+LETA E G I+
Sbjct: 259 DNLLNHTMHSEYANLPQATADLINQTHQNGNKVIAIGTTVTRVLETAYQKTADEHGHIST 318
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
WSG T+IFI PG++F +D L++NFHLPKSTLLMLVSAF G ++ Y+HA++ YRF+
Sbjct: 319 WSGDTDIFIYPGFKFGVIDKLLTNFHLPKSTLLMLVSAFAGKANIEQAYEHAVAQKYRFF 378
Query: 349 SYGDTSLLFQ 358
SYGD LL +
Sbjct: 379 SYGDAMLLER 388
>gi|260548786|ref|ZP_05823008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. RUH2624]
gi|260407954|gb|EEX01425.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. RUH2624]
Length = 345
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 127/359 (35%), Positives = 185/359 (51%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L +
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKSSNSPKAGAELFVGAD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + + G +P+PPY R + D Y
Sbjct: 112 NIPVIVRGRHEN--------LFVVEFSQPILPVLEQYGQLPIPPYFN--REAEEIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|260557115|ref|ZP_05829331.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 19606]
gi|260409221|gb|EEX02523.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 19606]
Length = 345
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 129/359 (35%), Positives = 186/359 (51%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L +
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFVGAD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + + G +P+PPY R +A D Y
Sbjct: 112 NIPVIVRGRHEN--------LFVVEFSQPILPVLEQYGQLPIPPYFN--REAEAIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|152980695|ref|YP_001352040.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Janthinobacterium sp. Marseille]
gi|166216727|sp|A6SUU3|QUEA_JANMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151280772|gb|ABR89182.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Janthinobacterium sp. Marseille]
Length = 341
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 137/356 (38%), Positives = 193/356 (54%), Gaps = 22/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P+ R ++RL+ V P ++D + + L+ D +VFN
Sbjct: 4 LSDFDFELPQELIAQTPLAERSASRLLQVLPE-----QMTDRNFAYIVDLLSPGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+ G++ ++ + + + R SK G +
Sbjct: 59 DTRVLKARFFGIKE-----TGGKVEVLVERVIDQRNVHAQIRASKSPAVGMRIRLAD--- 110
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ V ++ L ++ I G +PLPPYI DA D YQT
Sbjct: 111 --AFDVIVGERAGEFYEL----QFPDDVFELIEAHGRLPLPPYIEHA--ADAYDETRYQT 162
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK G+VAAPTAGLHF LL L + G+K+ ++TLHVGAGTF PV+ E+ +H MHS
Sbjct: 163 VYAKTPGAVAAPTAGLHFDQALLDALTAKGVKLAYITLHVGAGTFQPVRNENLAEHNMHS 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T + + + GG IV+VGTTS+R LE+A+ G + S T +FITPGY
Sbjct: 223 EWYTISQQTVDLVKATQVAGGNIVAVGTTSMRALESASQS-GSLQAGSADTRLFITPGYT 281
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ V L++NFHLPKSTLLMLVSAF G + + YQHAIS YRF+SYGD L +
Sbjct: 282 FKTVTRLITNFHLPKSTLLMLVSAFAGYDTIRAAYQHAISQRYRFFSYGDAMFLTR 337
>gi|319944500|ref|ZP_08018771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lautropia
mirabilis ATCC 51599]
gi|319742213|gb|EFV94629.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lautropia
mirabilis ATCC 51599]
Length = 351
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 143/359 (39%), Positives = 193/359 (53%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLM-VVHPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M + +FD+ LP IA P R RL+ V +D L++DLP + +
Sbjct: 1 MKLSDFDYHLPEELIAQYPPEQRAGGRLLDVTTLMQQPEASAADRLLADLPELIAPGSLL 60
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+T+VI A+L G + I + + R S K G LHF
Sbjct: 61 VFNDTRVIHARLAGRKES-----GGRIEVMVERIDGEHEVLAMVRASHPPKAGSRLHFGP 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
++ + + + + F + +G +PLPPYI + D D
Sbjct: 116 ENATECATVVSAREPGSMMLRIRFDAPAAGVL---ERLGELPLPPYIQHQ--PDQADEAR 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF LL+ L + GI +TLHVGAGTF+PV+ ED H
Sbjct: 171 YQTVFAREPGAVAAPTAGLHFDEALLAALRARGIDSAHLTLHVGAGTFLPVRTEDLSQHH 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A TAQA+ K+ G +V++GTT+LR LE + G SG T++FITP
Sbjct: 231 MHSERYTLSAETAQAIARAKAEGRPVVAIGTTALRALEASGGVAG-----SGETDLFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GYRFR VD L +NFHLPKSTLL+LVSAF G E ++ Y HAI+ YRF+SYGD LL +
Sbjct: 286 GYRFRVVDRLFTNFHLPKSTLLILVSAFAGRETIRRAYAHAIAQRYRFFSYGDAMLLDR 344
>gi|225010482|ref|ZP_03700953.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-3C]
gi|225005311|gb|EEG43262.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-3C]
Length = 349
Score = 375 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 137/361 (37%), Positives = 196/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP ++ P RD ++LMV+ I + D+ + + D +V
Sbjct: 1 MKLSAFGFELPEELLSEYPAENRDESKLMVIDRAKGT---IEHKMFKDIIDYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + +++ +G PLP YI R ++A D
Sbjct: 114 EDES---LVAEVIDNTTSRGRTLRFLYDGSYTDFRKKLRDLGETPLPKYIK--REVEAED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAG+HF+ +LL RL G+ VTLHVG GTF PV+VED
Sbjct: 169 EERYQTIYAKHEGAVAAPTAGMHFSKHLLKRLEIKGVDFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I+ +N K++ RI +VGTT +R LETA + +N G+TN F
Sbjct: 229 KHKMDSEELIIEEKATVTINHAKTQKKRICAVGTTVMRSLETAVSSQHTLNSHQGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P + F + +++NFHLPKSTLLM++SAF G + K+ Y+ AI Y+FYSYGD L+
Sbjct: 289 IFPPHEFSIANCMITNFHLPKSTLLMMISAFMGHDLMKEAYKIAIEEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|269123395|ref|YP_003305972.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Streptobacillus moniliformis DSM 12112]
gi|268314721|gb|ACZ01095.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Streptobacillus moniliformis DSM 12112]
Length = 342
Score = 375 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 202/356 (56%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+++DF+LP IA + PRD ++L+V++ N I D ++ +L ND +V
Sbjct: 1 MRVEDYDFELPLEFIAQHAIEPRDHSKLLVLNKNNGA---IEDKKFYNIIDYLTPNDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + + C L R+ W V +P+K +K D L F
Sbjct: 58 INRTKVIPARLFGKKE-----NGVILECFLLKRIDLKKWEVLLKPAKKLKINDKLIFSE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L A +++ G ++ F G+ E + +PLPPYI K + Y
Sbjct: 112 ----KLSAKLLEIKEDGNRIMEFEFEGVFEEILDE-LAEMPLPPYITEK----LENKNRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT+ LL ++ GI + V L VG GTF PV+VE+ +DHIM
Sbjct: 163 QTVYAKSGESVAAPTAGLHFTTELLEKIEKKGITIVEVYLTVGLGTFRPVQVENVEDHIM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N K G RI++VGTTS+R LE++ ++ + T+IFI
Sbjct: 223 HSEEYIVPEKTAEIINQGKKDGKRIIAVGTTSIRTLESSLDDNNNLIAQKSETSIFIHGE 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLPKSTL+MLVS+F E YQHAI + YRF+S+GD +
Sbjct: 283 YKFKIVDALITNFHLPKSTLIMLVSSFANKEYVMNAYQHAIKNNYRFFSFGDAMFI 338
>gi|328950409|ref|YP_004367744.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinithermus hydrothermalis DSM 14884]
gi|328450733|gb|AEB11634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinithermus hydrothermalis DSM 14884]
Length = 342
Score = 375 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 197/356 (55%), Gaps = 22/356 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++ +DLPP RIA + PRDSAR+MV+H + + ++PA+L D +V
Sbjct: 9 RLEDYAYDLPPERIAQQGAEPRDSARMMVLHRETG---RLEHRIFREIPAYLRPGDVLVL 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N TKVI A+ + + L W RP + + G LHF
Sbjct: 66 NQTKVIPARTVARK-----PTGAVLEVLLLREEVAGRWRALVRPGRRARVGAELHF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
L A V GE +L F+ ++ + +G PLPPYI YQ
Sbjct: 117 -DEGLRAVVEGIGEGGERILRFA---GDVWAHLERIGRTPLPPYIHA-----EVRPERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A++ GSVAAPTAGLHFT LL+RL +G++V ++TLHVG GTF PVK + + H+MH
Sbjct: 168 TVFARVPGSVAAPTAGLHFTPELLARLEGMGVEVRYLTLHVGPGTFKPVK-DSIERHVMH 226
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + TA+A+N K+ G R+V+VGTT +R LE+A + G T +FI P Y
Sbjct: 227 EEAYHVPEETARAVNRAKAEGRRVVAVGTTVVRALESAWRAGEGVRAGEGATRLFIRPPY 286
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F AVD L++NFHLP+STLLMLV+AF G E T + Y+ A++ YRFYS GD L+
Sbjct: 287 TFHAVDALVTNFHLPRSTLLMLVAAFAGYETTMRAYRTAVAEGYRFYSLGDAMLIL 342
>gi|223937431|ref|ZP_03629336.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [bacterium
Ellin514]
gi|223893982|gb|EEF60438.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [bacterium
Ellin514]
Length = 358
Score = 375 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 155/368 (42%), Positives = 197/368 (53%), Gaps = 21/368 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LPP IA P RD +RL+V+ N I+ D+ FL D +V
Sbjct: 1 MRTSDFDFALPPELIAQAPTATRDQSRLLVLKRNT---AEIAHRKFRDVLEFLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L R + L + N W V RP K + G L F +
Sbjct: 58 LNNSRVIPARLRA----LNARTNGQFEVLLLEEHATNDWWVMMRPGKRARIGTELVFRDK 113
Query: 121 DGQ-SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G + + A+VID G + F+ + + +G IPLPPYI R D D
Sbjct: 114 TGVVAHIRASVIDTNPEGHRRIHFT-GTPNIIENLDALGEIPLPPYIE--RNSDKGLAED 170
Query: 180 ---YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK GSVAAPTAGLHFT LL + S GI++ FVTLHVG GTF PVK E
Sbjct: 171 DIRYQTVYAKPAGSVAAPTAGLHFTDELLHEIRSRGIQICFVTLHVGLGTFAPVKAETLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNI 295
+H+MH E + A TAQ + + K G RI++VGTTS+R+LE+ A G + G T I
Sbjct: 231 EHVMHEERYELSAETAQTITTAKHAGRRIIAVGTTSVRVLESVAAQHHGKLIAGKGRTRI 290
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAISHAYRFYS 349
FI P Y F VD+L++NFHLP STLLMLVSAF G E Y A+ YRF+S
Sbjct: 291 FIHPPYSFSVVDVLLTNFHLPCSTLLMLVSAFAAPGEMRGREIVLAAYAEAVREKYRFFS 350
Query: 350 YGDTSLLF 357
YGD L+
Sbjct: 351 YGDAMLVI 358
>gi|54297930|ref|YP_124299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Paris]
gi|81601758|sp|Q5X3P9|QUEA_LEGPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|53751715|emb|CAH13137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Paris]
Length = 337
Score = 375 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 137/357 (38%), Positives = 198/357 (55%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++ +
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYLDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LE + L + + ++ +G IPLPPYI R ++ D Y
Sbjct: 113 KRLEVLE---------RQDDLFLCKASENILDLLNDLGHIPLPPYI--AREDESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCAAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|325281821|ref|YP_004254363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
gi|324313630|gb|ADY34183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
Length = 349
Score = 375 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 135/361 (37%), Positives = 187/361 (51%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F + LPP IA P RD RLMVV I + D+ + + D V
Sbjct: 1 MKLSKFRYKLPPELIAQHPSANRDECRLMVVDRKTGT---IEHKVFKDVIDYFDEKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + EI L ++ + W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGAEIEVFLLRELNRDLRIWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E ++ + +G PLP I R ++ D
Sbjct: 114 EDDS---LVAEVIDNTTSRGRTLRFLFDGEYDEFKKLLYGLGETPLPRTIT--RKVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ +G+VAAPTAGLHF+ L+ R+ GI ++TLHVG G F V VED
Sbjct: 169 EERYQTIFARYEGAVAAPTAGLHFSRELMKRMEIKGIDFAYITLHVGLGNFREVDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE + T + +N K +I +VGTT +R LE+ T G + + G+TN F
Sbjct: 229 KHKMDSEQIIVGGDTVKIVNDAKDERHKICAVGTTVVRTLESCVTTKGRLTEYDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D +SNFHLP STLLM+V+AF G + K Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVPDAFISNFHLPYSTLLMMVAAFGGYDLVMKAYDLAVKEKYRFGTYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|77165122|ref|YP_343647.1| queuosine biosynthesis protein [Nitrosococcus oceani ATCC 19707]
gi|254434710|ref|ZP_05048218.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosococcus oceani AFC27]
gi|91207387|sp|Q3JAM9|QUEA_NITOC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|76883436|gb|ABA58117.1| Queuosine biosynthesis protein [Nitrosococcus oceani ATCC 19707]
gi|207091043|gb|EDZ68314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosococcus oceani AFC27]
Length = 344
Score = 374 bits (961), Expect = e-102, Method: Composition-based stats.
Identities = 132/360 (36%), Positives = 193/360 (53%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LP IA P R +RL+ + ++ D +LP L++ D ++
Sbjct: 1 MQLSDFTYNLPKQLIAQYPPKRRGESRLLSLE---GASGIVKDRQFIELPELLSTKDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A++ G + +I + + + + R + + G L
Sbjct: 58 FNNTKVIPARIQGTKDS-----GGKIEILIERFLDQHRALAHIRANNPPRAGRRLVMEQ- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
V K E+ + + L + + +G +PLPPYI R D Y
Sbjct: 112 ------SVEVEVKGRVKELFELRFLDPRPLPQLLEAIGQMPLPPYIQ--RKTVPVDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF LL RL + GI+ ++TLHVGAGTF PV+V++ H M
Sbjct: 164 QTIYASRPGAVAAPTAGLHFDKPLLKRLQAQGIRSGYITLHVGAGTFQPVRVKNITQHQM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + + GGR+V+VGTT++R LE A+ + G+I P+ G T IFI PG
Sbjct: 224 HSEYVEVSEQICAQIRDTQQAGGRVVAVGTTTVRALEAASAK-GVIAPYQGETEIFIFPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+RF V+ L++NFHLP++TLLMLV AF G E Y+HAI YRF+SYGD + + +
Sbjct: 283 HRFHTVNALITNFHLPETTLLMLVCAFAGSEHVLAAYRHAIKKGYRFFSYGDAMFITEAK 342
>gi|257462420|ref|ZP_05626834.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D12]
gi|317060084|ref|ZP_07924569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D12]
gi|313685760|gb|EFS22595.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D12]
Length = 343
Score = 374 bits (961), Expect = e-102, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 198/356 (55%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++D+DLP I P PRD A+L++++ + D D+ +L D +V
Sbjct: 4 KLQDYDYDLPEELIGQSPREPRDHAKLLLINRKT---KKLEDKYFYDILDYLQKGDVLVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + L R ++W +P+K +K G +
Sbjct: 61 NSTKVIPARLYGQKE-----TGGVLEVLLVKRKDLDTWECLLKPAKKLKLGQKIFIGP-- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L A +++ G +L FS G E + +GT+PLPPYI K YQ
Sbjct: 114 -NAELVAELLEIQEDGNRILKFSYEG-SFEENLDRLGTMPLPPYIVEKLEDQEM----YQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ ED +H MH
Sbjct: 168 TVYAKRGESVAAPTAGLHFTKELLEKIQEKGIEIVDIYLEVGLGTFRPVQTEDVLNHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E+ I A+ +N K+ G RI+SVGTT+ R LE++ E+GI+ T+IFI PGY
Sbjct: 228 EELFEIPPEAAEKINRAKAEGRRIISVGTTTTRALESSVDENGILLAQKKNTDIFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
RF+ VD L++NFHLPKSTLLMLVSAF E +Y HA+ Y F+S+GD ++
Sbjct: 288 RFQMVDALITNFHLPKSTLLMLVSAFSEREFMLDVYHHAVEQEYHFFSFGDAMFIY 343
>gi|169794709|ref|YP_001712502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AYE]
gi|213157920|ref|YP_002320718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB0057]
gi|215482296|ref|YP_002324478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB307-0294]
gi|294839351|ref|ZP_06784034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. 6013113]
gi|294857031|ref|ZP_06794800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. 6013150]
gi|301344894|ref|ZP_07225635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB056]
gi|301513643|ref|ZP_07238880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB058]
gi|301595286|ref|ZP_07240294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB059]
gi|226736726|sp|B7GWL7|QUEA_ACIB3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736727|sp|B7I973|QUEA_ACIB5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238688034|sp|B0V628|QUEA_ACIBY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169147636|emb|CAM85499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Acinetobacter baumannii AYE]
gi|213057080|gb|ACJ41982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB0057]
gi|213985971|gb|ACJ56270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB307-0294]
Length = 345
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 128/359 (35%), Positives = 184/359 (51%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L +
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFVGAD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + + G +P+PPY R + D Y
Sbjct: 112 NIPVIVRGRHEN--------LFVVEFSQPILPVLEQYGQLPIPPYFN--REAEEIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL+ L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAELDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|53805128|ref|YP_113199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylococcus capsulatus str. Bath]
gi|81682708|sp|Q60AZ8|QUEA_METCA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|53758889|gb|AAU93180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylococcus capsulatus str. Bath]
Length = 347
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 200/358 (55%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ EF +DLP + IA P+ R ++RL+ + + D D+ L D +V
Sbjct: 1 MLKSEFHYDLPQNLIAQSPLPERSASRLLCLDGATGA---LEDKSFRDIEKLLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L G + + L + + R SK + G L
Sbjct: 58 FNDTRVLPARLFGRKE-----TGGAVEILLERLLGERLMLAHVRASKAPRPGTWLAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ V+++ G++ L+ L+ + +G +PLPPYI RP + D Y
Sbjct: 110 --EAEHRVRVVER--DGDLFLLELAGEEPLQTVLEQIGHMPLPPYIT--RPDTSADLERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF + LL RL GI + VTLHVGAGTF PV+ E+ +DH M
Sbjct: 164 QTVYATRPGAVAAPTAGLHFDTELLGRLRGAGIDMARVTLHVGAGTFQPVRTENLEDHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + +A+ + RGGR+V+VGTTS+R LETA G + +SG T +FI PG
Sbjct: 224 HAEYCEVGPEVVKAVERARGRGGRVVAVGTTSMRSLETAA-SGGSLRTFSGETRLFIKPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+RF VD L++NFHLP+STLL+LV AF G ET Y+HAI+ AYRF+SYGD +
Sbjct: 283 FRFNCVDALVTNFHLPESTLLVLVCAFAGHRETLAAYRHAIAQAYRFFSYGDAMFVTP 340
>gi|226226034|ref|YP_002760140.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Gemmatimonas aurantiaca T-27]
gi|226089225|dbj|BAH37670.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Gemmatimonas aurantiaca T-27]
Length = 353
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 199/357 (55%), Gaps = 16/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++D++LP RIA PV PRD++RL+VV ++ D+ + + + DA+V
Sbjct: 12 RTADYDYELPEERIAQLPVEPRDASRLLVVDRESGS---LTHRQFRDVVSLIPAGDAVVL 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N TKV A+L G R L + + P ++ G +
Sbjct: 69 NTTKVFRARLLGHRES-----GGPAEILLLRHLRDAHYEAMIHPGGKLRPGRTVTIAPG- 122
Query: 122 GQSRLEATVIDKWNTGEILL-VFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++D ++ + + ++ I G IPLPPYI R D Y
Sbjct: 123 ----FTVEIVDTTPRRTRIVKLHAPEFSSVQSAIEQHGHIPLPPYIE--RSDTDADAARY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT +LL+ L + G++ V LHVGAGTF PV +D H+M
Sbjct: 177 QTIYAAQAGSVAAPTAGLHFTDDLLATLDARGVERVNVLLHVGAGTFRPVSDDDPSQHVM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A LN+V++RGG+I +VGTTS+R +ETA T DG+I+P+ G TNIF+ P
Sbjct: 237 HEEWCEVTPDAAARLNAVRARGGKIWAVGTTSVRTIETAATPDGVIHPYIGETNIFLRPP 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+FR VD L++NFHLP+STL+MLV+AF G + T + Y+ A++ YRFYSYGD +L
Sbjct: 297 YQFRGVDHLITNFHLPRSTLIMLVAAFAGYDLTMQAYRTAVAEQYRFYSYGDAMVLL 353
>gi|171910851|ref|ZP_02926321.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Verrucomicrobium spinosum DSM 4136]
Length = 324
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 132/357 (36%), Positives = 190/357 (53%), Gaps = 33/357 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ +FD+ LP IA P+ R ++R++VVH I +DLP +L +D +V
Sbjct: 1 MLTSDFDYQLPEELIASEPLADRSASRMLVVHRESGT---IEHRSFTDLPKYLRPDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+ + +P W +P K ++ G + S
Sbjct: 58 LNDTRVLPARYF--------SNDGTKELLRLTFATPTLWRCMVKPGKKLRVGHTIAIGSA 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + + + G+ L+ F E + G + LPPY+ R+ + Y
Sbjct: 110 TGTVK------EIYENGDRLIEFDQMVDE-----AAFGHLALPPYMEREERTED--KERY 156
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS+AAPTAGLHFT LL+ + FVTLHVG GTF PVK + DH+M
Sbjct: 157 QTVFAKHEGSIAAPTAGLHFTPELLASV-----PHTFVTLHVGVGTFQPVKADRITDHVM 211
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE F+ +AQ +N GR+++VGTT+ R+LE+ + G + G T+IFI P
Sbjct: 212 HSERYFLSEASAQRINEA----GRVIAVGTTATRVLESIAQKHGGLKAAEGETSIFIYPP 267
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y FR VD L++NFHLPKSTL+MLVSA G + + Y+ AI YRFYSYGD L+
Sbjct: 268 YEFRVVDALVTNFHLPKSTLMMLVSALAGKDLIFRAYEEAIRERYRFYSYGDCMLIL 324
>gi|86134467|ref|ZP_01053049.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Polaribacter sp. MED152]
gi|85821330|gb|EAQ42477.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Polaribacter sp. MED152]
Length = 349
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 127/361 (35%), Positives = 189/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF+LP +A P RD +RLMV++ I D+ + + D ++
Sbjct: 1 MKLSNFDFELPEELLAKYPAEHRDESRLMVLNRKEQT---IEHKTFKDVINYFDEGDVLM 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A++ G + + I L + W V P++ I+ G+ L F
Sbjct: 58 LNNTKVFPARMYGNK----EKTGARIEVFLLRELNAENRLWDVLVDPARKIRIGNKLFFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G ++ +G PLP + R ++ D
Sbjct: 114 EDDS---LVAEVIDNTTSRGRTLRFLFDGSYEAFREKLLELGETPLPRSVN--REVEELD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ +LL RL G+ +TLHVG GTF PV+VED
Sbjct: 169 EERYQTIFAKNEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEMTLHVGLGTFSPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I A A +N K+ R+ +VGTT +R +E++ + + +NP+ G+TN F
Sbjct: 229 KHKMDSEQIVIPANAADKINKAKAEKRRVCAVGTTVMRTVESSVSSNAQLNPFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTL+M +AF G + + Y+ A+ Y+F +YGD ++
Sbjct: 289 IFPPYEFSIANSMITNFHPPKSTLMMQAAAFAGYDFLMEAYKTAVKEGYKFSTYGDAMII 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|171320041|ref|ZP_02909111.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria MEX-5]
gi|171094700|gb|EDT39744.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria MEX-5]
Length = 416
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 194/361 (53%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V P + D ++LP+ + D +VFN
Sbjct: 65 LSDFDFNLPPELIAQTALPERTASRLLEVDH-TVEPARLVDRNFAELPSCIAPGDLLVFN 123
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+ G + +I + ++ R SK G L
Sbjct: 124 DTRVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADAFD 178
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F + L I G +PLPPYI DA D YQT
Sbjct: 179 ------VTVGERVEPFFTLHFPQPCLTL---IEQHGRLPLPPYIEHD--ADANDETRYQT 227
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 228 VYASNPGAVAAPTAGLHFDLPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMHS 287
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + T+IFIT
Sbjct: 288 EWYDLPQSLIDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 347
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 348 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLLTR 407
Query: 359 K 359
+
Sbjct: 408 R 408
>gi|296107617|ref|YP_003619318.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Legionella
pneumophila 2300/99 Alcoy]
gi|295649519|gb|ADG25366.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Legionella
pneumophila 2300/99 Alcoy]
Length = 337
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 137/357 (38%), Positives = 198/357 (55%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++ +
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYLDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LE + L + + ++ +G IPLPPYI R ++ D Y
Sbjct: 113 KRLEVLE---------RQDDLFLCKASENILDLLNDLGHIPLPPYI--AREDESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCSAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|325123435|gb|ADY82958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein ) [Acinetobacter calcoaceticus
PHEA-2]
Length = 345
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 124/359 (34%), Positives = 183/359 (50%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLLHLD----SKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K L +
Sbjct: 57 LNDTKVMKARLKGKRS-----TGGAIEILVERMLNHTTAYCHIKSSNSPKADAELFVGAD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + + G +P+PPY R + D Y
Sbjct: 112 NIPVIVRGRHEN--------LFVVEFSQPILPVLEQYGQLPIPPYFN--REAEEIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L ++ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLEQKNVQKSFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSYGDAMLI 340
>gi|50083827|ref|YP_045337.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. ADP1]
gi|81613338|sp|Q6FEJ3|QUEA_ACIAD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|49529803|emb|CAG67515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Acinetobacter sp. ADP1]
Length = 344
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 130/359 (36%), Positives = 187/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+FDLP IA P+ R ++RL+ + DH +D+ +N D +V
Sbjct: 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLD----AHGHYHDHAFTDILDLINDGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRAS-----GGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGEN 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++ + L + + G +P+PPY R + D Y
Sbjct: 112 GIKVTVQGRHEN--------LFVVEFSEPILSVLDRYGQLPIPPYFN--REAEEIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF +LL +L + I+ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHDPQKIASVAAPTASLHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + TA+ + K+RG ++++VGTT+ R LE+A G I+ W+G T IFI
Sbjct: 222 IMHSEWCDVPESTAELIRQTKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCVVDRLITNFHLPESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLI 340
>gi|262380186|ref|ZP_06073341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SH164]
gi|262298380|gb|EEY86294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SH164]
Length = 346
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 126/359 (35%), Positives = 189/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ ++ SD +D+ D +V
Sbjct: 1 MQLSDFSFNLPDELIARYPLAQRSASRLLHLN----SEGQYSDRHFTDILELFEPGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R + + + + S K G L +
Sbjct: 57 LNDTKVMKARLKGRRA-----TGGAVEILVERIFDQTIAHCHIKASNSPKAGAELFIGAD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + ++ + L + + + G +P+PPY R +A D Y
Sbjct: 112 EVKVTVQGRHEN--------LFVVEFSQPILQVLDQHGQLPIPPYFN--REAEAIDSERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G++ FVTLHVGAGTF+PV+ D ++H
Sbjct: 162 QTVFHDPEKIASVAAPTASLHFDEVLLNKLSEKGVQQAFVTLHVGAGTFLPVRSIDIENH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + + V++RG ++++VGTT+ R LE+A +G I W+G T IFI
Sbjct: 222 IMHSEWCEVPENTVELIKQVQTRGNKVIAVGTTATRALESAAQAHNGKIEAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCVVDRLITNFHLPESTLLMLVSALSTRDHILAAYEHAVRKHYRFFSYGDAMLI 340
>gi|227327498|ref|ZP_03831522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 355
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 136/359 (37%), Positives = 195/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQAERSGCRLLSLDGPTGN---LTHGVFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A D + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ESVKATMAARHDALFE-----LHFDDSRDVLSILNDIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI + FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIDMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQNAAIEPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 286 PGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTLSAYRQAVAEQYRFFSYGDAMFIT 344
>gi|323143762|ref|ZP_08078430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Succinatimonas hippei YIT 12066]
gi|322416475|gb|EFY07141.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Succinatimonas hippei YIT 12066]
Length = 359
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 198/361 (54%), Gaps = 22/361 (6%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+F+FDLP IA P R R++ + N + D DL FL D +VFN+
Sbjct: 6 SDFNFDLPKELIANYPSAERTKCRMLCLDGNTG---ELCDRTFIDLKDFLRPGDLLVFND 62
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
TKVI A+L G + + + + N+ + R SK K G L DG
Sbjct: 63 TKVIPARLYGTK-----KTGGAVELLIERITGLNTALSHIRASKAPKAGSELFI---DGG 114
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L T D G++ ++ + G L + VG IPLPPYI R +A D YQT
Sbjct: 115 YVLNVTGRD----GDLFMIETADGSSLLDLLDKVGHIPLPPYIE--REDEALDKDRYQTV 168
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
Y+K+ G+VAAPTAGLHF + + L S+G+ FVTLHVGAGTF PV+ +D H MH E
Sbjct: 169 YSKVPGAVAAPTAGLHFDNAQIEELKSLGVNTAFVTLHVGAGTFQPVREDDIVKHHMHKE 228
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-----GIINPWSGFTNIFIT 298
+ A A+ + + G R+++VGTT++R LE+A T G I P+ T+IFI
Sbjct: 229 FVQLPEEVANAVKATHAAGHRVIAVGTTAVRSLESAATYARENGLGEIAPFHNDTSIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ VD L++NFHLP+STL+MLV AF G + T Y HA+ Y+F+SYGD + +
Sbjct: 289 PGYQYQVVDCLITNFHLPESTLIMLVCAFAGYKNTMHAYHHAVKDKYKFFSYGDCMFITK 348
Query: 359 K 359
+
Sbjct: 349 R 349
>gi|52842221|ref|YP_096020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|52629332|gb|AAU28073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 349
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 198/357 (55%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 13 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++ +
Sbjct: 70 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYLDAG 124
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ + L + + ++ +G IPLPPYI R ++ D Y
Sbjct: 125 KRLEVLQ---------RQDDLFLCKACENILDLLNDLGHIPLPPYI--AREDESLDKERY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 174 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 234 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 293 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 349
>gi|258545497|ref|ZP_05705731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cardiobacterium hominis ATCC 15826]
gi|258519197|gb|EEV88056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cardiobacterium hominis ATCC 15826]
Length = 345
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 145/355 (40%), Positives = 201/355 (56%), Gaps = 18/355 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+F ++LP IA P+ R +ARL++ + ++D +V DLP L +D +VF
Sbjct: 3 RKSDFMYELPDELIARFPLAERSAARLLLARAVSVDEVALADRMVRDLPDLLEPDDLLVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L G + + L S + + Y R SK K G ++ S +
Sbjct: 63 NNTRVLPARLFGQKES-----GGRVEILLERLKSAHEANAYVRASKSPKVGGVIRIGSAE 117
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L S ++ G +P+PPY+ R D YQ
Sbjct: 118 L----------RVTGRHEALFALYSETPWAELLAAQGEMPIPPYLE--RAALESDKQRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +AK G+VAAPTAGLHF LL+ + G+K+ VTLHVGAGTF PV+ E+ +HIMH
Sbjct: 166 TVFAKHSGAVAAPTAGLHFDEALLAAIRLRGVKMAEVTLHVGAGTFQPVRHENLAEHIMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A+ + ++RGGR+V++GTTSLR LE+A E G + P+SG TN+FITPGY
Sbjct: 226 EEWLQVGQDVVDAVAACRARGGRVVAIGTTSLRALESAA-EGGELAPFSGDTNLFITPGY 284
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
RFR VD L++NFHLP+STLLMLVSAF G + YQHAI+ YRF+SYGD L
Sbjct: 285 RFRVVDALLTNFHLPESTLLMLVSAFAGYANIRAAYQHAIAARYRFFSYGDAMFL 339
>gi|91786377|ref|YP_547329.1| S-adenosylmethionine [Polaromonas sp. JS666]
gi|91695602|gb|ABE42431.1| S-adenosylmethionine [Polaromonas sp. JS666]
Length = 353
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 141/363 (38%), Positives = 196/363 (53%), Gaps = 20/363 (5%)
Query: 1 MM----VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M + +FDF LP IA P R ++RL+ +D +DLP L
Sbjct: 1 MKTHFSLSDFDFALPEELIAQHPAAQRSASRLL-----DGRSSPATDRRFADLPDLLTPG 55
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+V+ A+L G + + + + + + + SK + G +L
Sbjct: 56 DLLVFNDTQVVKARLFGQKSTGGRLELLIERVLPALADASHEVAAHMKVSKKPQPGAVLQ 115
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
AT++ +W + L + ++ G +PLPPYI +
Sbjct: 116 M-----DGGFTATLLGRWPQEDGPLYRFRFSSDPYALMAQHGHVPLPPYITHSDSAED-- 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+ YQT +AK G+VAAPTA LHF +L++L + GI VTLHVGAGTF PVK E
Sbjct: 169 ELRYQTVFAKNPGAVAAPTAALHFDEAMLAQLEARGIARASVTLHVGAGTFQPVKTETIA 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E + A T QA+ + K+RGGR+V+VGTT++R LE+ P TNIF
Sbjct: 229 DHTMHFERFEVPAATQQAIAACKARGGRVVAVGTTTVRALES----HAKFGPACDDTNIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG+ F VD+L++NFHLPKSTL+MLVSAF G E +YQHAI+ YRF+SYGD LL
Sbjct: 285 ITPGFEFAVVDLLLTNFHLPKSTLMMLVSAFAGYEHIMALYQHAIAGRYRFFSYGDAMLL 344
Query: 357 FQK 359
+K
Sbjct: 345 ARK 347
>gi|91207327|sp|Q5ZU04|QUEA_LEGPH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 337
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 198/357 (55%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++ +
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYLDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ + L + + ++ +G IPLPPYI R ++ D Y
Sbjct: 113 KRLEVLQ---------RQDDLFLCKACENILDLLNDLGHIPLPPYI--AREDESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|148359575|ref|YP_001250782.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Legionella
pneumophila str. Corby]
gi|166216730|sp|A5IDI6|QUEA_LEGPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148281348|gb|ABQ55436.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Legionella
pneumophila str. Corby]
Length = 337
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 137/357 (38%), Positives = 197/357 (55%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D ++ +
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDFIYLDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LE + L + + ++ +G IPLPPYI R ++ D Y
Sbjct: 113 KRLEVLE---------RQDDLFLCKASENILDLLNDLGHIPLPPYI--AREDESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCAAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|296536218|ref|ZP_06898336.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseomonas
cervicalis ATCC 49957]
gi|296263440|gb|EFH09947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseomonas
cervicalis ATCC 49957]
Length = 360
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 154/359 (42%), Positives = 217/359 (60%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF LP + IA P PRD+ARL+V P + D V DLPA+L D +V
Sbjct: 12 LRAEDFDFALPEALIAQAPARPRDAARLLVA-----APEGLRDQGVRDLPAWLRPGDLMV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L R E + L+ S W R +K ++ GDIL
Sbjct: 67 VNDTRVIPARLRARR------GEARLEIMLNRAESGGMWHALVRNAKKLRPGDILTI--- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G L V+++ G L+ F +L + G IPLPPYIAR D DY
Sbjct: 118 EGAPELAPRVVERQEGGAALIDFGPDQGKLAAALEKAGEIPLPPYIARPDGPRPEDREDY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q +A+ G+VAAPTA LHFT LL+ L G+ +TLHVGAGTF+P++ ++ +H +
Sbjct: 178 QPIFAREPGAVAAPTASLHFTPGLLAALAERGVGQVSLTLHVGAGTFLPIRGDNPREHKL 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A ++N ++RGGRIV++GTT+LRLLE+A E G+++P+ G T+IF+ PG
Sbjct: 238 HAEWGHISEAAAASINETRARGGRIVAIGTTALRLLESAVDERGVVHPFRGLTDIFLLPG 297
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ FR+ D+L++NFHLPKS+L MLVSAF G + Y HA++ YRFYSYGD SLLF++
Sbjct: 298 HVFRSADLLLTNFHLPKSSLFMLVSAFAGQARMRDAYAHAVAQGYRFYSYGDASLLFRE 356
>gi|220916512|ref|YP_002491816.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter dehalogenans 2CP-1]
gi|254764262|sp|B8JH48|QUEA_ANAD2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219954366|gb|ACL64750.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 345
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 154/362 (42%), Positives = 206/362 (56%), Gaps = 20/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPEEGSPA---HRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP---NSWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L G + ++ L + W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS-----GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLTF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V D G + G ELE + G IPLPPYI +R DA D
Sbjct: 113 ------DGLEARVDDVEGEGFYRVTLDRQGPELEAALGRAGRIPLPPYI--RRAPDAEDA 164
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A+ GS AAPTAGLHFT LL+RL + GI+ VTLHVG GTF+P++ +D D
Sbjct: 165 ARYQTIWARAPGSAAAPTAGLHFTEPLLARLAARGIRRTAVTLHVGPGTFLPIRGDDLDL 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A L + ++RGGRIV+VGTTS+R LE+A DG + G T +FI
Sbjct: 225 HRMHGERYEVSPAAAAELAATRARGGRIVAVGTTSVRTLESAWR-DGAVAAGPGRTELFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ F AVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD LL
Sbjct: 284 RPGHPFHAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLLL 343
Query: 358 QK 359
++
Sbjct: 344 RR 345
>gi|224370223|ref|YP_002604387.1| QueA [Desulfobacterium autotrophicum HRM2]
gi|223692940|gb|ACN16223.1| QueA [Desulfobacterium autotrophicum HRM2]
Length = 352
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 202/359 (56%), Gaps = 14/359 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++ ++LP RIA P RD +RL+ + ++ H DL LN +D +V
Sbjct: 3 RLSDYCYNLPQERIAQTPCQQRDGSRLLRLDRKSGD---VTHHGFQDLVTLLNPDDLLVI 59
Query: 62 NNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSV--YARPSKVIKKGDILHF 117
NNT+V+ A+L G + + + L+ + R SK K G +L
Sbjct: 60 NNTRVVPARLMGKKTTGGVIEVMIVDYAAGLNCLAGNGYFQCDCLVRASKSPKIGAVLEL 119
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ + A V + G L FS +G ++ + I G +PLPPYI R ++ D
Sbjct: 120 GDE-----ITARVQARK-GGLFELKFSCAG-DVVQAIKRHGQLPLPPYIHRTNGLEPGDE 172
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA +G+VAAPTAGLHFT L+ L + GI+ +TLHVG GTF+PV+V+D +
Sbjct: 173 TDYQTVYAANEGAVAAPTAGLHFTDTLMETLRAKGIEFCEITLHVGYGTFVPVRVDDIRE 232
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H E I A A+N K G R+V+VGTTS+R LE E G+I+P SG ++FI
Sbjct: 233 HQIHRESFEISEAAAAAVNRAKKAGRRVVAVGTTSVRTLEYGADETGLIHPGSGVCDLFI 292
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF+ +D +++NFHLP+STLLMLVSAF G + + Y AI YRF+SYGD L+
Sbjct: 293 YPGYRFKLIDAMITNFHLPESTLLMLVSAFAGKDPIFRAYGAAIQSNYRFFSYGDAMLI 351
>gi|307610728|emb|CBX00335.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila 130b]
Length = 337
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 201/357 (56%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++ +
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYLDA- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A ++ + L + + + ++ +G IPLPPYI R ++ D Y
Sbjct: 112 -------AKRLEVLQRQDDLFLCK-ASENILDLLNDLGHIPLPPYI--DREDESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI+ YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIAKRYRFFSYGDASLLL 337
>gi|237747214|ref|ZP_04577694.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Oxalobacter
formigenes HOxBLS]
gi|229378565|gb|EEO28656.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Oxalobacter
formigenes HOxBLS]
Length = 343
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 144/354 (40%), Positives = 200/354 (56%), Gaps = 22/354 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P+ R ++RL++ ++D L +L+ +D +VFN
Sbjct: 4 LSDFDFELPEELIAQFPLEKRSASRLLIAR-----DEKLADSRFDHLIDYLDRDDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKV+ A+ G + + +I + + + R SK K+ +L
Sbjct: 59 NTKVLKARFFGAK-----KTGGKIEILIERILDNRTALAKIRASKSPKENSLLLI----- 108
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
LE +V + +L +L + G +PLPPYI R DA D YQT
Sbjct: 109 DDELEVSVKGREGEFYVLHF----PSDLFSILDHHGHLPLPPYI--ARTADAYDEKRYQT 162
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK G+VAAPTAGLHF L+ +L GI+ ++TLHVGAGTF PV+ E+ D+H MH+
Sbjct: 163 VFAKEPGAVAAPTAGLHFDEELMGKLEEKGIRSAYLTLHVGAGTFQPVRSENLDEHKMHT 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T A+ + + ++V+VGTTSLR LE+A+ G + S T++FITPGYR
Sbjct: 223 EWYTIPQETVYAVKTARENKRKVVAVGTTSLRALESASQT-GQLVAGSNETSLFITPGYR 281
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F VD L++NFHLPKSTLLMLVSAF G E +K Y HAIS YRF+SYGD LL
Sbjct: 282 FNTVDWLVTNFHLPKSTLLMLVSAFAGYELIRKAYAHAISQQYRFFSYGDAMLL 335
>gi|294083598|ref|YP_003550355.1| Queuosine biosynthesis protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663170|gb|ADE38271.1| Queuosine biosynthesis protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 386
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 164/363 (45%), Positives = 211/363 (58%), Gaps = 18/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLPP RIA P PRDSARL+ + I+D V DLP L + D ++
Sbjct: 17 MKLSDFDFDLPPDRIATAPAQPRDSARLLDL-----SGAAIADRHVGDLPDLLRAGDLLI 71
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T VI A+L G R H W V+A+P+K + DI+ F
Sbjct: 72 VNDTAVIPARLIGKR-GDARISVTLHKYEGHKNGGNAIWRVFAKPAKKCRPDDIIMFAPD 130
Query: 121 DGQSRLEATVIDKWNTGEILLVFS-------ISGIELERQISLVGTIPLPPYIARKRPID 173
G A V+ + G++ L F + L + GT+PLPPYIAR +
Sbjct: 131 FG-----ARVLGRGEGGDVELAFIDPRSGNALDTDSLNAGLDTYGTMPLPPYIARPDGVL 185
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D+ DYQT +A +G+VAAPTAGLHFT L S L + G+ + VTLHVGAGTF+PV VE
Sbjct: 186 DSDHEDYQTMFASQRGAVAAPTAGLHFTDGLTSALQAKGVAIAAVTLHVGAGTFLPVTVE 245
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+H MHSE G I A A + + K GGR+++VGTTSLR+LE + G I ++G T
Sbjct: 246 TIAEHKMHSEWGAIPADVAAKIIATKQAGGRVIAVGTTSLRILEASFAALGHIGHFAGET 305
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG+ F VD+LM+NFHLPKSTLLMLVSAF G Y HAI+ YRF+SYGD
Sbjct: 306 DIFITPGFSFNVVDMLMTNFHLPKSTLLMLVSAFAGHAPIMAAYDHAIASGYRFFSYGDA 365
Query: 354 SLL 356
LL
Sbjct: 366 CLL 368
>gi|312891440|ref|ZP_07750957.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Mucilaginibacter paludis DSM 18603]
gi|311296134|gb|EFQ73286.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Mucilaginibacter paludis DSM 18603]
Length = 349
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 130/361 (36%), Positives = 192/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD +RL+V+H + I + D+ + + D ++
Sbjct: 1 MKLSQFKFNLPESLVAHSPSENRDESRLLVLHRDSG---KIEHKIFKDVLNYFDDKDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 INNTKVFPARLYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + I +F + E R + ++G PLP YI R D
Sbjct: 114 DDD---LLIAEVVDNTTSRGRTIRFLFDGTDEEFRRNVEILGETPLPKYIK--RKATEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ L+ RL G++ VTLHVG GTF V+VED
Sbjct: 169 KERYQTIFAKNEGAVAAPTAGLHFSRELMKRLELKGVEFAEVTLHVGLGTFRTVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I+ A +N RI +VGTTS+R +E+A + + + + +T+ F
Sbjct: 229 KHKMDSEQFIIEQKQADIVNRGIENKKRICAVGTTSMRTIESAVSANKTLKAANDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLLM++ AF G E Y+ A+ YRFYSYGD ++
Sbjct: 289 IFPPYDFSIANSMITNFHTPESTLLMMICAFGGYENVMNAYEVAVKEKYRFYSYGDAMMI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|192291253|ref|YP_001991858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris TIE-1]
gi|238692597|sp|B3QIN0|QUEA_RHOPT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|192285002|gb|ACF01383.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris TIE-1]
Length = 360
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 191/361 (52%), Positives = 247/361 (68%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P+ + + D +V DLPA L D +V
Sbjct: 1 MRTELFDFDLPTQNIALRPVSPRDAARMLVVRPS----VPLEDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLTGRRIGRG--LEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRFGHD 114
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K + GE+ L FS G L++ I+ VG PLPPYIA KR DA+D
Sbjct: 115 GRVCLLGHLDATVEAKGDAGEVTLAFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQDI 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT +
Sbjct: 175 ADYQTMFASNEGAVAAPTAGLHFTAELETALAARGVGLHRITLHVGAGTFLPVKAEDTSE 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+IFI
Sbjct: 235 HRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SLLF
Sbjct: 295 TPGYRFRAVDMLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASLLF 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|86158966|ref|YP_465751.1| queuosine biosynthesis protein [Anaeromyxobacter dehalogenans
2CP-C]
gi|123498575|sp|Q2IKY3|QUEA_ANADE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85775477|gb|ABC82314.1| Queuosine biosynthesis protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 345
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 154/362 (42%), Positives = 207/362 (57%), Gaps = 20/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPGEGAPA---HRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP---NSWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L G + ++ L + W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS-----GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLAF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V G + G ELE + G IPLPPYI +R DA D
Sbjct: 113 ------DGLEARVDAVEGEGFYRVTLDRQGAELEAALGRAGRIPLPPYI--RRAPDAEDA 164
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A+ GS AAPTAGLHFT LL+RL + G++ VTLHVG GTF+P++ +D D
Sbjct: 165 ARYQTIWARAPGSAAAPTAGLHFTEPLLARLAARGVRRTAVTLHVGPGTFLPIRGDDLDA 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A L + ++RGGRIV+VGTTS+R LE+A DG + P G T +FI
Sbjct: 225 HRMHGERYEVSPAAAAELAAARARGGRIVAVGTTSVRTLESAWR-DGEVAPGPGRTELFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ FRAVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD LL
Sbjct: 284 RPGHPFRAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLLL 343
Query: 358 QK 359
++
Sbjct: 344 RR 345
>gi|255321125|ref|ZP_05362291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SK82]
gi|255301679|gb|EET80930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SK82]
Length = 346
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 126/359 (35%), Positives = 189/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ ++ SD +D+ D +V
Sbjct: 1 MQLSDFSFNLPDELIARYPLAQRSASRLLHLN----SEGQYSDRHFTDILELFEPGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R + + + + S K G L +
Sbjct: 57 LNDTKVMKARLKGRRA-----TGGAVEILVERIFDQTIAHCHIKASNSPKAGAELFIGAD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + ++ + L + + + G +P+PPY R +A D Y
Sbjct: 112 EVKVTVQGRHEN--------LFVVEFSQPILQVLDQYGQLPIPPYFN--REAEAIDSERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G++ FVTLHVGAGTF+PV+ D ++H
Sbjct: 162 QTVFHDPEKIASVAAPTASLHFDEVLLNKLSEKGVQQAFVTLHVGAGTFLPVRSIDIENH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + + V++RG ++++VGTT+ R LE+A +G I W+G T IFI
Sbjct: 222 IMHSEWCEVPENTVELIKQVQARGNKVIAVGTTATRALESAAQAHNGKIEAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCVVDRLITNFHLPESTLLMLVSALSTRDYILAAYEHAVREHYRFFSYGDAMLI 340
>gi|83591621|ref|YP_425373.1| queuosine biosynthesis protein [Rhodospirillum rubrum ATCC 11170]
gi|91207400|sp|Q2RXQ9|QUEA_RHORT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|83574535|gb|ABC21086.1| Queuosine biosynthesis protein [Rhodospirillum rubrum ATCC 11170]
Length = 345
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 186/356 (52%), Positives = 233/356 (65%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IA+RP PRDSARL++V D V DLP L+ D +V
Sbjct: 1 MRVDLFDFDLPRDLIAVRPAVPRDSARLLLVEGESR-----RDLGVGDLPGLLDPGDILV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + TLH RV P++W +ARP++ +K G ++ F
Sbjct: 56 FNDTRVIPARLKGRI------GDGGVEVTLHKRVGPDAWDCFARPARKLKPGVVILFAEG 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV + GE L F +G L + G IPLPPYI RP DARD DY
Sbjct: 110 -----FTATVAARGEDGEATLRFDRAGAALMAALEAYGHIPLPPYIK--RPDDARDRADY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHFT LL+ L + G+ VTLHVGAGTF+PVKVEDTDDH M
Sbjct: 163 QTIYAREDGAVAAPTAGLHFTPALLAALEARGVSRAMVTLHVGAGTFLPVKVEDTDDHRM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A TA+A+N+ ++ GG++V+VGTT++RLLE+AT D +I P+ G T+IFITPG
Sbjct: 223 HAETGTLTAQTAEAINAARAAGGKVVAVGTTAMRLLESATGADKVIRPFHGDTSIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF AVD LM+NFHLP+STL MLVSAF G + Y HAIS YRFYSYGD+SLL
Sbjct: 283 YRFNAVDRLMTNFHLPRSTLFMLVSAFAGASRMRNAYAHAISQGYRFYSYGDSSLL 338
>gi|297566044|ref|YP_003685016.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Meiothermus silvanus DSM 9946]
gi|296850493|gb|ADH63508.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Meiothermus silvanus DSM 9946]
Length = 338
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 147/362 (40%), Positives = 201/362 (55%), Gaps = 29/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++++D+ LPP+ IA PRDS+RLMVVH + + D+ +L D +V
Sbjct: 1 MPLEDYDYSLPPALIAQSGAEPRDSSRLMVVHRGTG---QLEHRIFRDITEYLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+ N I L + P+ W +P+K K L F
Sbjct: 58 LNQSKVIPARTFAT-----NAHGTRIEVLLVRELKPDLWEAMLKPAKRAK--GWLRFADG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V+ + G +L F+ + + +G PLPPYI Y
Sbjct: 111 -----LMAEVVKVEDDGTRVLHFTGG---VWEHLERIGKTPLPPYIHASIDPQ-----RY 157
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT LL R+ +G++++FVTLHVG GTF PV+ ED D H+M
Sbjct: 158 QTVYAKTPGSVAAPTAGLHFTPQLLQRIYEMGVELHFVTLHVGPGTFKPVQ-EDPDRHLM 216
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E I TAQA+N K+ G RI++VGTT +R LE+A ++ G + G T +
Sbjct: 217 HLEPYEIPPETAQAVNQAKAEGRRIIAVGTTVVRTLESAWENSLSSASGRVRAGVGETRL 276
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG++F+ +D L++NFHLPKSTLLMLVSAF G + T + Y+ A+ YRFYS GD L
Sbjct: 277 FIRPGFKFKVIDALITNFHLPKSTLLMLVSAFTGYDLTMRAYRMAVEERYRFYSLGDAML 336
Query: 356 LF 357
+
Sbjct: 337 IL 338
>gi|222109585|ref|YP_002551849.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
ebreus TPSY]
gi|221729029|gb|ACM31849.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
ebreus TPSY]
Length = 366
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 138/367 (37%), Positives = 201/367 (54%), Gaps = 23/367 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P R +RL+ +D + +LP L D +VFN
Sbjct: 13 LSDFDFELPELLIAQHPAPQRSGSRLL-----DGRTAPPTDRIFRELPDLLQPGDLLVFN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + ++ + ++ N + + SK G LH
Sbjct: 68 DTRVVKARVFGEKAS-----GGKLELLIERVLTGNEVVAHMKVSKKPLPGATLHLAGGAA 122
Query: 123 QSRLEATVIDKWNTGEILLVFS----ISGIELERQISLVGTIPLPPYIARK-----RPID 173
+AT++ ++ + L +G + G +PLPPYI R+ P
Sbjct: 123 AGGFDATLLGRYPDADGPLFRLALRGPAGESPWELMERHGHLPLPPYIERQQAGGNDPHA 182
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A+ G+VAAPTA LHF +L+RL GI+ VTLHVGAGTF PVK E
Sbjct: 183 GEDSERYQTVFARAPGAVAAPTAALHFDDAVLARLAERGIERASVTLHVGAGTFQPVKTE 242
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE + T AL + RGGR+V+VGTT++R LE+ +G T
Sbjct: 243 NLAEHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWAASG----QAAGDT 298
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG++F+ VD+L++NFHLPKSTL+MLVSAF G E ++Y+HA++ YRF+SYGD
Sbjct: 299 SIFITPGFQFQVVDLLLTNFHLPKSTLMMLVSAFAGYEHIMQLYRHAVAQRYRFFSYGDC 358
Query: 354 SLLFQKR 360
LL + R
Sbjct: 359 MLLERPR 365
>gi|227113369|ref|ZP_03827025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
Length = 355
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 136/359 (37%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQAERSGCRLLSLDGPTGN---LTHGVFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+ + + + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---VKATMTARHDA--LFELHFDDARDVLSILNDIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI + FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIDMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQNAAIEPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 286 PGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYRQAVAEQYRFFSYGDAMFIT 344
>gi|327399541|ref|YP_004340410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hippea
maritima DSM 10411]
gi|327182170|gb|AEA34351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hippea
maritima DSM 10411]
Length = 343
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 131/359 (36%), Positives = 198/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD++LP IA P PRD +L+V + I + ++ +++ ND +V
Sbjct: 1 MEVSLFDYNLPKELIAQHPHIPRDECKLLVCNRQN---HTIEHRIFKEIINYIDENDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A++ + +I L + + R +KK I++ +
Sbjct: 58 LNDTKVIPARIFAQK-----PTGGKIEIFLLEEIGKGRFLCLTR--GKLKKDTIVYLKNS 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA--RKRPIDARDYV 178
DK +V + + + +G +PLPPYI +D+
Sbjct: 111 KTARITRIENSDK------RIVEFETNENIYELLEDIGEVPLPPYIQRNYDNYNKEKDFK 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +AK +G+VA+PTAGLHFT L++ + + G+K+ ++TLHVG GTF PVK ++ + H
Sbjct: 165 YYQTVFAKKEGAVASPTAGLHFTEKLINSIKAKGVKIAYITLHVGIGTFRPVKEKEVEKH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I TA N KS+ R+++VGTT +R LE++ +DGI+ P T+IFI
Sbjct: 225 KMHSEKYQISKETADLFNQTKSKRRRVIAVGTTVVRALESSINKDGILKPQKSSTDIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++AVD L++NFHLPKSTLLMLVSAF E+ Y+ AI YRF+S+GD ++
Sbjct: 285 PGYKYKAVDALITNFHLPKSTLLMLVSAFYEREKILNCYKEAIDKHYRFFSFGDAMFIY 343
>gi|256845602|ref|ZP_05551060.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_36A2]
gi|256719161|gb|EEU32716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_36A2]
Length = 348
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 132/355 (37%), Positives = 197/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 10 LSDYDYFLPEELIGQKPREPRDSAKLMLINRKTGS---IEHKNFYNIIDYLQKGDVLVRN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R S ++W +P+K +K G L+
Sbjct: 67 ATKVIPARIFGHKD-----TGGVLEILLIKRTSLDTWECLLKPAKKLKLGQKLYIGENK- 120
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK + YQT
Sbjct: 121 --ELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRK----LENKDRYQT 173
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ E+ +H MH
Sbjct: 174 VYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTENVLEHKMHE 233
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ ++G + T IFI PGY+
Sbjct: 234 ESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDKNGKLIAQKKDTGIFIYPGYK 293
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 294 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 348
>gi|54294901|ref|YP_127316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Lens]
gi|81601277|sp|Q5WV37|QUEA_LEGPL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|53754733|emb|CAH16220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Lens]
Length = 337
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 198/357 (55%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++ +
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYLDAG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ + L + + ++ +G IPLPPYI R ++ D Y
Sbjct: 113 KRLEVLQ---------RQDDLFLCKASENILDLLNDLGHIPLPPYI--DREDESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + ++TLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDEAVLSSIRARGVNIAYITLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|270157347|ref|ZP_06186004.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae D-4968]
gi|289164259|ref|YP_003454397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae NSW150]
gi|269989372|gb|EEZ95626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae D-4968]
gi|288857432|emb|CBJ11260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae NSW150]
Length = 337
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 203/357 (56%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+V + H ++ FL S D +V
Sbjct: 1 MNKEDFYFDLPHELIAQYPLANRSDSRLLVYDRKIG---EYGHHQFREIADFLKSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K G I+
Sbjct: 58 MNDSKVIPARLYGHK-----TTGGKVELLVERITGEFTFLAHIKASKALKAGSIIQLEQN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ + L + IE+ ++ VG IPLPPYI R + D Y
Sbjct: 113 KHIEILD---------RQDDLFVCKANIEVLELLNGVGHIPLPPYI--ARNDETLDIDRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +L+ + S GI V +VTLHVGAGTF PV+ ++ +DH M
Sbjct: 162 QTIYAKHAGSVAAPTAGLHFDEAVLANIRSRGISVGYVTLHVGAGTFRPVRCDNIEDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A A+++ K+ G R+++VGTT+LR LE+A ++G + P S T+IFI PG
Sbjct: 222 HREHFTISAELCAAIHATKAAGNRVIAVGTTALRSLESAV-QNGALTPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ D LM+NFHLP+STLLMLVSAF G ++ K+Y AI YRF+SYGDTSLL
Sbjct: 281 YEFKICDGLMTNFHLPESTLLMLVSAFIGHKQAMKLYHEAIEKRYRFFSYGDTSLLL 337
>gi|285018699|ref|YP_003376410.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Xanthomonas albilineans GPE
PC73]
gi|283473917|emb|CBA16418.1| probable s-adenosylmethionine:trna ribosyltransferase-isomerase
(queuosine biosynthesis protein quea) [Xanthomonas
albilineans]
Length = 371
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 195/357 (54%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL+ V P P D V DLP L D ++
Sbjct: 22 LKKSDFHYDLPDDLIAQAPLAERSASRLLWVPP---APAPFQDRQVRDLPQLLRVGDLLI 78
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + + SK + G + +
Sbjct: 79 FNDTRVIPARLFGQK-----QTGGRVEILIERLLGGQCARAQLGVSKSPQVGARIALDAG 133
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L G + LE + G +PLPPYI R+ ++ Y
Sbjct: 134 GEAEVLS-------RDGAFYQLQFHVDGTLEHWLQQAGRLPLPPYIRREPGLED--RERY 184
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL L G++V +TLHVGAGTF PV+VE + H M
Sbjct: 185 QTVFAREAGAVAAPTAGLHFDVPLLQALHERGVEVGHITLHVGAGTFQPVRVEALEQHQM 244
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A + + ++ GGR+++VGTT +R LE+A+ +DG + P++G T +FI PG
Sbjct: 245 HHEWLNVGASLVEQVRRTRAAGGRVIAVGTTVVRALESAS-KDGELYPFAGETQLFILPG 303
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YR R+VD +++NFHLP+STLLM+V+AF G E Y+HAI+ YRF+SYGD LL+
Sbjct: 304 YRIRSVDAMVTNFHLPESTLLMMVAAFAGRERIFAAYRHAIAQRYRFFSYGDAMLLW 360
>gi|114570417|ref|YP_757097.1| queuosine biosynthesis protein [Maricaulis maris MCS10]
gi|122315730|sp|Q0ANH8|QUEA_MARMM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114340879|gb|ABI66159.1| Queuosine biosynthesis protein [Maricaulis maris MCS10]
Length = 353
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 171/361 (47%), Positives = 233/361 (64%), Gaps = 11/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP +RIALRP PRD+AR++ V + V +D V DLP L D +V
Sbjct: 1 MRVSDFDFHLPEARIALRPARPRDAARMLHV----ASNGVFADRGVRDLPDLLQPGDLMV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI A L G+R E+ LH R+ ++W + RP+K ++ GD + F
Sbjct: 57 FNDTRVIPAALKGIRPARAVGGGGPVEVEVNLHKRIDASAWRAFVRPAKRLRMGDEIAFG 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L+A V K G++ LVF+ +G L+ I++ G +PLPPYIARKR +D +D
Sbjct: 117 E-----TLKAEVTGKSEGGDVRLVFNAAGAALDAAIAVAGEMPLPPYIARKRGVDEKDEA 171
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A +GSVAAPTAGLHFT L++ L + G++ VTLHVGAGTF+PVK +DTDDH
Sbjct: 172 DYQTLFATHEGSVAAPTAGLHFTPELMAALEARGVEQTRVTLHVGAGTFLPVKSDDTDDH 231
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + A A A+N+ K+ G R++ VGTT+LR +E+ + GI+ S T+IF+T
Sbjct: 232 QMHSEWCTVSAEAADAINAAKAEGRRVIPVGTTALRTIESLASGPGIVRAGSRDTDIFLT 291
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG F D+LM+NFHLPKSTL MLVSA G++ ++ Y HAI+ YRFYSYGD LL +
Sbjct: 292 PGSDFAITDMLMTNFHLPKSTLFMLVSALSGLDVMQRAYAHAIAAEYRFYSYGDACLLER 351
Query: 359 K 359
+
Sbjct: 352 R 352
>gi|322434368|ref|YP_004216580.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX9]
gi|321162095|gb|ADW67800.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX9]
Length = 368
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 142/371 (38%), Positives = 206/371 (55%), Gaps = 19/371 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FD++LP IA P R ++R++ + + D + LP L + D ++
Sbjct: 1 MLVSDFDYELPEELIAQTPPETRGASRMLRMDRASGA---LVDDSFASLPECLKAGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRR-----EKEISCTLHMRVSPNS----WSVYARPSKVIKK 111
N+T+VI A+L GVR + I L ++S + W RP++ ++
Sbjct: 58 LNDTRVIPARLFGVRAGLHTQHNSPAPTGRIEVLLTSQISADDEGSTWETLVRPARKVQP 117
Query: 112 GDILHFFSQD--GQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIA 167
G+ LHF+ + L A V+ GE L + L + +G +PLPPYI
Sbjct: 118 GETLHFYDAERPSAPALTAEVLAAGEFGERTLRLIPADPQEPLTAILERIGHLPLPPYIY 177
Query: 168 RKR--PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
R P D YQT +A+ GS AAPTAGLHFT +L+ L + G++V +TLHVG G
Sbjct: 178 RPDEAPNTTADRERYQTVFAQPAGSAAAPTAGLHFTPEILAALKARGVEVQTLTLHVGLG 237
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TF PV+ E T+D +H+E + A TA+A+ ++ G RIV+VGTT R LE G
Sbjct: 238 TFQPVRAERTEDIRLHAEPYTLPAATAEAIQRAQAEGRRIVAVGTTVTRTLEHCAAI-GN 296
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ P SG T++F++PG+ FR V L++NFHLP+STL+MLVSAF G E T Y HA+ Y
Sbjct: 297 LAPHSGTTSLFLSPGHEFRVVGGLLTNFHLPQSTLVMLVSAFAGREATLAAYAHAVRERY 356
Query: 346 RFYSYGDTSLL 356
RF+SYGD L+
Sbjct: 357 RFFSYGDCMLI 367
>gi|326801376|ref|YP_004319195.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium sp. 21]
gi|326552140|gb|ADZ80525.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium sp. 21]
Length = 349
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 134/361 (37%), Positives = 191/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S IA P RD ARLMV+ I + D+ + +D ++
Sbjct: 1 MKLSQFKFNLPDSLIAHEPAETRDEARLMVLDRKTGA---IEHKIFKDVLNYFEEHDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + I +F S E R I ++G PLP YI R D
Sbjct: 114 DND---LLVAEVVDNTTSRGRTIRFLFDGSDEEFRRNIEILGETPLPKYIK--RKPTPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ L+ RL G++ VTLHVG GTF V+VED
Sbjct: 169 KFRYQTIFAKNEGAVAAPTAGLHFSRELMKRLELKGVEFAEVTLHVGLGTFRQVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I+ A +N + R+ +VGTTS+R +E+A + + + + +T+ F
Sbjct: 229 KHKMDSEQFIIEQKDADIVNKAIAEKRRVCAVGTTSMRSIESAVSANRTLKAANDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLLM++ AF G E Y+ A+ YRFYSYGD L+
Sbjct: 289 IFPPYDFSIANSMITNFHTPESTLLMMICAFGGYEHVMNAYEIAVKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|94497297|ref|ZP_01303868.1| Queuosine biosynthesis protein [Sphingomonas sp. SKA58]
gi|94423160|gb|EAT08190.1| Queuosine biosynthesis protein [Sphingomonas sp. SKA58]
Length = 344
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 183/360 (50%), Positives = 233/360 (64%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSARL+ + P I D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFDLPPDNIALRPASPRDSARLL----AAAGPSGIEDRTVRDLPSLLRAGDMLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E I TLH R+ W + R +K +++GD + F +
Sbjct: 57 FNDTRVIPAQLEGRR------GEARIGATLHKRIGLRQWQAFLRNAKRVREGDRIEFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + G + L F +E + GT+PLPPYIA KRP D +D DY
Sbjct: 111 -----VTAIAGARDEDGGVTLEFE-GDEPVEILLERAGTMPLPPYIASKRPTDEQDRSDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFT L+ + + G+ +TLHVGAGTF+PVK +DTDDH M
Sbjct: 165 QTMFAREDGAVAAPTAALHFTPELMDAIAAAGVLTQTLTLHVGAGTFLPVKAQDTDDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA A LN+ ++ GGR+++VGTTSLRLLE+A EDG+I P++ T IFITPG
Sbjct: 225 HAEWGRIDAAAADRLNAARAAGGRLIAVGTTSLRLLESAAGEDGVIRPFADETRIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFRAVD LM+NFHLPKSTL MLVSA G E + +Y HAI+ YRFYSYGD+SLL ++
Sbjct: 285 YRFRAVDGLMTNFHLPKSTLFMLVSALMGRERMQAIYAHAIAQGYRFYSYGDSSLLLPEK 344
>gi|158520100|ref|YP_001527970.1| queuosine biosynthesis protein [Desulfococcus oleovorans Hxd3]
gi|158508926|gb|ABW65893.1| Queuosine biosynthesis protein [Desulfococcus oleovorans Hxd3]
Length = 349
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 154/356 (43%), Positives = 204/356 (57%), Gaps = 11/356 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V ++D+DLPP RIA +PV RDS+RL+ + IS H DLP L +D +V
Sbjct: 3 LVSDYDYDLPPDRIAQQPVTQRDSSRLLRLDRARGG---ISHHRFYDLPDLLRPSDLLVV 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L G++ + + S ++ G F
Sbjct: 60 NNTRVVPARLEGIKETGGRAGALILDYPGVRTEKGVICRCMVKASGRLRPGTRFLF---- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP-IDARDYVDY 180
+ RL A+V+D G L FS G + ++ + VG PLPPYI R R D Y
Sbjct: 116 -EDRLSASVVD-AADGLYTLCFSCDG-DFDQTLFAVGRTPLPPYITRNRDGAPCDDRTCY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHFT N+L RL + GI VTLHVG GTF+PV+V D DH M
Sbjct: 173 QTVYADRDGAVAAPTAGLHFTPNVLDRLAAKGISTAPVTLHVGHGTFLPVRVSDIRDHAM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A TA A+N+ + GGR+V+VGTT +R LE G I +SG ++FI PG
Sbjct: 233 HSERFEVPAATAAAINATRRDGGRVVAVGTTVVRTLEYVARTCGEIRAFSGACDLFIYPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+A+ +++NFHLP+STLLMLVSAF G E+ Y+ AI YRFYSYGD L+
Sbjct: 293 YNFQAIAAMITNFHLPRSTLLMLVSAFTGREKVLAAYEAAIQEKYRFYSYGDAMLI 348
>gi|299768785|ref|YP_003730811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. DR1]
gi|298698873|gb|ADI89438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. DR1]
Length = 345
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 126/359 (35%), Positives = 184/359 (51%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLLHLD----SKGKYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L+ +
Sbjct: 57 LNDTKVMKARLKGKRS-----TGGAIEILVERMLNHTTAYCHIKSSNSPKAGAELYVGAD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + + G +P+PPY R + D Y
Sbjct: 112 NIPVIVRGRHEN--------LFVVEFSQAILPVLEQYGQLPIPPYFN--REAEEIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL +L ++ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDETLLEKLEQKNVQKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 IMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSYGDAMLV 340
>gi|89899439|ref|YP_521910.1| S-adenosylmethionine [Rhodoferax ferrireducens T118]
gi|89344176|gb|ABD68379.1| S-adenosylmethionine [Rhodoferax ferrireducens T118]
Length = 360
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 141/363 (38%), Positives = 205/363 (56%), Gaps = 21/363 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R +RL+ S D + DLP+ L D +VFN
Sbjct: 14 LSDFDFHLPPELIAQHPAPERSGSRLL-----DSTSATPQDRVFRDLPSLLQPGDLLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + + N + + R SK + G + G
Sbjct: 69 DTRVINARLFGEKS-----TGGKLELLVERVLGGNQVAAHLRVSKKPEVGASVALTGAPG 123
Query: 123 -QSRLEATVIDKWNTGE----ILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L AT++ +W + ++ + +G + ++ G +PLPPYI +
Sbjct: 124 THENLRATLLGRWPDAQGALFRFVLTNDAGDDPFTLMARHGHVPLPPYITHSDSAEDAA- 182
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +AK G+VAAPTA LHF LL+ L + G++ FVTLHVGAGTF PVK E+ +
Sbjct: 183 -RYQTVFAKNPGAVAAPTAALHFDDALLAALDARGVQRAFVTLHVGAGTFQPVKTENLAE 241
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE + T QA+ ++RGGR+++VGTT++R LE+ +G T IFI
Sbjct: 242 HQMHSEWYDVPTATQQAIADCRARGGRLIAVGTTTVRTLESWAKTGQT----TGDTQIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+ F+ VD+L++NFHLPKS+L+MLVSAF G E +YQHA++ YRF+SYGD LL
Sbjct: 298 TPGFEFQLVDLLVTNFHLPKSSLMMLVSAFAGYEPVMALYQHAMAAQYRFFSYGDAMLLA 357
Query: 358 QKR 360
++R
Sbjct: 358 RQR 360
>gi|296283991|ref|ZP_06861989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Citromicrobium bathyomarinum JL354]
Length = 349
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 177/360 (49%), Positives = 228/360 (63%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD+A+++VV +D V DLP L + D +V
Sbjct: 1 MKVDLFDFDLPPERIALRPVSPRDAAKMLVVDG----AAPFADRQVRDLPDLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R I TLH R+ W + R +K +++GD + F
Sbjct: 57 FNDTRVIPAQLEGERIREGAS-GAAIGATLHKRIDARRWQAFVRNAKRLREGDTIRFPDG 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ T + G L F+ G +E ++ G +PLPPYIA++R D RD DY
Sbjct: 116 -----ISVTAEARAEDGSWTLAFA-GGEPVEELLARAGAMPLPPYIAQRRAADERDAQDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT L+ RL + GI +TLHVGAGTF+PVK +DT H M
Sbjct: 170 QTLFADKAGAVAAPTAALHFTPALVERLDAAGIVRETLTLHVGAGTFLPVKADDTAQHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A A LN+ ++ G R+++VGTTSLRLLE+A ++ I P++G T+IFITPG
Sbjct: 230 HAEWGEITAEAAARLNAARAEGRRVIAVGTTSLRLLESAADQNHTIQPFAGDTDIFITPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y FRAVD LM+NFHLPKSTL+MLVSA G E + Y +AI+H YRFYSYGD+SLL R
Sbjct: 290 YEFRAVDGLMTNFHLPKSTLMMLVSALMGRERMMEAYAYAIAHEYRFYSYGDSSLLLPPR 349
>gi|262281067|ref|ZP_06058849.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter calcoaceticus RUH2202]
gi|262257298|gb|EEY76034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter calcoaceticus RUH2202]
Length = 345
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 125/359 (34%), Positives = 184/359 (51%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLLHLD----SKGQYHDHMFTDIIDLFEDGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L +
Sbjct: 57 LNDTKVMKARLKGKRS-----TGGAIEILVERMLNHTTAYCHIKSSNSPKAGAELFVGAD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + + G +P+PPY R + D Y
Sbjct: 112 NIPVIVRGRHEN--------LFVVEFSEPILPVLEQYGQLPIPPYFN--REAEEIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL +L ++ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEVLLEKLEQKNVQKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + + K+RG +++++GTT+ R LE+A G I W+G T IFI
Sbjct: 222 IMHSEWCDVPQETIDLILATKARGNKVIAIGTTATRALESAAQAHSGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSYGDAMLI 340
>gi|319892693|ref|YP_004149568.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Staphylococcus pseudintermedius HKU10-03]
gi|317162389|gb|ADV05932.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Staphylococcus pseudintermedius HKU10-03]
Length = 341
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+ LP IA P+ RD +RL+ ++ + D D+ F D +V
Sbjct: 1 MNIEEFDYVLPEPLIAQTPLKQRDQSRLLYLNRDTGET---EDLHFKDITRFFQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ + W V +P+K IK G L F
Sbjct: 58 LNDTRVMPARLFGIK----EETNAKVEMLMLTQIEGDDWEVLLKPAKRIKLGQTLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +++AT I + + G ++ S GI L+ ++ +G +PLPPYI + + Y
Sbjct: 111 -GEGKIKATCIKELDQGGRIMRLSYEGI-LQERLDELGEMPLPPYIKER----LDEKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ F+TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKAAGSAAAPTAGLHFTDALLDDIRRQGVQIAFITLHVGLGTFRPVSVDHIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K+ G RI+SVGTTS R LET ++ SG+TNIFI PG
Sbjct: 225 HSEYYQMSQETADILNQTKAAGHRIISVGTTSTRTLETIRSQFDTFQATSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y HA++ YRF+S+GD ++
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSRQFVLSAYHHAVAEKYRFFSFGDAMIII 341
>gi|261749412|ref|YP_003257098.1| queuosine biosynthesis protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497505|gb|ACX83955.1| queuosine biosynthesis protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 347
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 202/361 (55%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP +A +P RD +RLM+++ I + DL + D I+
Sbjct: 1 MRTSDFDFGLPLDLLANQPTEERDESRLMIINRKS---NGIKHEIFKDLHQYFEEGDTII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + E +I L + P +W V P++ ++ G+ L+F
Sbjct: 58 FNNTKVFPARLFGNK----EKTEAKIEVFLLRELDPIDRTWDVLVDPARKVRVGNKLNFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILL--VFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
L VID + +L FS + EL ++I +G PLP YI R D D
Sbjct: 114 YG-----LTGEVIDNTTSRGRILQLHFSGTHKELIKKIKELGKTPLPKYIK--RLPDKND 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +GSVAAPTAGLHF+ +LL +L GI + +TLH+G G+F+PV+VED
Sbjct: 167 EERYQTIYAKEEGSVAAPTAGLHFSKHLLKKLEIKGINLVEITLHLGLGSFLPVEVEDIS 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI T +N + RI +VGT+S+R +E++ + + +NP+ G+TN F
Sbjct: 227 KHKMDSEKCFIKKETCDIVNKSIQQKKRICAVGTSSMRAIESSVSPNKYLNPFYGWTNKF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH+PKSTLLM+ AF G + K Y+ A YRFYSYGD+ L+
Sbjct: 287 IFPPYNFSIANSMITNFHMPKSTLLMMTVAFTGYDLLMKAYKIATKEKYRFYSYGDSMLI 346
Query: 357 F 357
Sbjct: 347 L 347
>gi|237740338|ref|ZP_04570819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 2_1_31]
gi|229422355|gb|EEO37402.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 2_1_31]
Length = 351
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 135/355 (38%), Positives = 199/355 (56%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 13 LSDYDYFLPEELIGQKPREPRDSAKLMLINRKTG---EIEHKHFYNIIDYLQKGDVLVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIYGHKES-----GGVLEVLLIKRISIDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK + YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKFYYEG-SFEEVLDKLGSMPLPPYITRK----LENKDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ E+ +H MH
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLKKISEKGIEIIDIFLEVGLGTFRPVQTENVLEHKMHE 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+N K++G RI+SVGTT+ R LE++ E+G + T IFI PGYR
Sbjct: 237 ESFEISEKAAKAINEAKAQGRRIISVGTTATRALESSVDENGKLIAQKKDTEIFIYPGYR 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSA E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 297 FKIVDALITNFHLPKSTLLMLVSALYDREKMLEIYNLAVKEEYHFFSFGDSMFIY 351
>gi|193216172|ref|YP_001997371.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
gi|238692714|sp|B3QXK9|QUEA_CHLT3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193089649|gb|ACF14924.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
Length = 346
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 127/360 (35%), Positives = 190/360 (52%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F + LP + +A P PRDS +LMV+ SDL + D +V
Sbjct: 1 MRLSDFRYTLPKTAVAEYPSEPRDSCKLMVLDRRKKTTD---HKQFSDLLDYFKKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 LNDTKVFPARLYGNK----EKTSAKIEVFLLRELNKQAGLWDVLVEPARKVRVGNKIYFP 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A V+D + + F I++ + VG +P+PPYI R + D
Sbjct: 114 ND-----LVAEVVDNTTSRGRTIRFLNPDIDIFSIVEKVGQMPIPPYIK--RDPEEEDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+I G+V AP AGLHFT+ LL + G+++ +TLH G TF V+VED H
Sbjct: 167 RYQTVFARIPGAVVAPLAGLHFTNPLLKAIQDKGVEIISLTLHPGLSTFREVEVEDISKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE + A+ +NS+K + R+ +VGTT R LE T +G I G+T+ +I
Sbjct: 227 KMDSEYYNVPYSCAKVINSIKEKKSGRVFAVGTTVCRALEANATVEGRIKFGEGWTDKYI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F+ VD L++NFH P+STLLMLVSAF + K Y+ A+ Y+F YGD L+F
Sbjct: 287 YPPYDFKVVDALITNFHQPESTLLMLVSAFAEHDFLMKNYKLALKSDYKFLGYGDAMLIF 346
>gi|218961722|ref|YP_001741497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Cloacamonas acidaminovorans]
gi|167730379|emb|CAO81291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Cloacamonas acidaminovorans]
Length = 346
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 133/354 (37%), Positives = 185/354 (52%), Gaps = 17/354 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+D+ LP IA P R +RLM V I H + + L D ++ N
Sbjct: 8 TDTYDYYLPKELIAQFPAEKRTDSRLMQVKRQSR---EIYHHRFTAILELLKEGDLVIIN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++KV A+L + +I L +++ N+W A+P K +K LHF
Sbjct: 65 SSKVFPARLFATKE-----TGAKIEILLLHQLNENTWQCIAKPGKKLKSPQWLHFSD--- 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L + + G + F+ + +I +G IPLPPYI R D YQT
Sbjct: 117 --NLSGYISQGNSEGIREIQFTCK-TDFWDEIKRIGHIPLPPYIE--RSDTILDSERYQT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS+AAPTAG HF + +L L G+ V LH+G GTF PVK + DH MHS
Sbjct: 172 VYAKENGSIAAPTAGFHFDAEILKALKKKGVLFSEVILHIGIGTFRPVKTKRITDHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E+ I TA A+N K G R+V VGTTS+R +E+ +DG + S +T++FI PG+
Sbjct: 232 ELATIPEITAAAINLAKKEGRRVVCVGTTSVRSVESFW-QDGEMQSGSKWTDLFIYPGFN 290
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ D L++NFHLPKSTLLM++SAF G E +K Y A+ YRF+SYGD +
Sbjct: 291 FKVTDALLTNFHLPKSTLLMMISAFGGWETIRKAYNIAVQEKYRFFSYGDAMFI 344
>gi|149926708|ref|ZP_01914968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Limnobacter
sp. MED105]
gi|149824637|gb|EDM83853.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Limnobacter
sp. MED105]
Length = 362
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 147/373 (39%), Positives = 193/373 (51%), Gaps = 32/373 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P R +RL+V N I D L + L ND +V
Sbjct: 5 MKLSEFDFNLPEQLIAQHPPEIRGESRLLVCENNK----PIEDRLFEHVLNLLGPNDVLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + +I L + ++ R SK K G +
Sbjct: 61 INDTKVLKARLQGHKAS-----GGKIEVMLERILDDKRFTAMIRASKSPKPGSEVVLAGV 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L + L S + L + G +PLPPYI +A+D Y
Sbjct: 116 AKARVLS------KHDMMYELELLESSLSLPDLLDAHGALPLPPYIEHN--ANAQDDERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL ++ + G+K+ +TLHVGAGTF+PVK ++ D+H+M
Sbjct: 168 QTVFAREPGAVAAPTAGLHFTEQLLQQVQARGVKLLNLTLHVGAGTFLPVKTDNVDEHVM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-------------- 286
HSE I A+ K GGR+V+VGTTSLR LE TE G
Sbjct: 228 HSERYAISGAVIAAMIKAKENGGRVVAVGTTSLRALEAWATETGCNLNTTEGVGKAAEFA 287
Query: 287 -NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ +G T IFI PGY F+ VD L++NFHLPKSTLLMLVSAF G Y HAI+ Y
Sbjct: 288 RSGHAGDTQIFIKPGYTFKVVDRLITNFHLPKSTLLMLVSAFAGKTNILNAYAHAIAQQY 347
Query: 346 RFYSYGDTSLLFQ 358
RF+SYGD L +
Sbjct: 348 RFFSYGDAMWLER 360
>gi|186477272|ref|YP_001858742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia phymatum STM815]
gi|238691287|sp|B2JGG8|QUEA_BURP8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|184193731|gb|ACC71696.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia phymatum STM815]
Length = 353
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 197/360 (54%), Gaps = 21/360 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V+ P +D ++LP + D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVNGQT-TPASFADRRFAELPECIQPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + + R SK G +L
Sbjct: 63 DTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPGPGTVLRLAD--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L + I G +PLPPYI DA D YQT
Sbjct: 115 --AFDVTVGERVEPFYTLHF----PDDCLTLIEQFGRLPLPPYIEHD--PDAFDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF ++ +RL + G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYAQNPGAVAAPTAGLHFDDSIFARLDAKGVERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RG R+++VGTTS+R LE A + + S T+IFIT
Sbjct: 227 EWYQLPQSLVDRIAATRARGNRVIAVGTTSMRALEAAARDADAAGKPLAATSAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+FR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYKFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDGRYRFFSYGDAMLLTR 346
>gi|294635291|ref|ZP_06713790.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella tarda ATCC 23685]
gi|291091325|gb|EFE23886.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella tarda ATCC 23685]
Length = 357
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 194/360 (53%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R + RL+ + + +D+ L D +V
Sbjct: 1 MRVSDFTFELPDELIARYPQAQRSACRLLSLDGPTGKR---EHGVFTDIVDKLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKIEVLVERVLDRARVLAHVRASKAPKPGAALLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++ G +PLPPYI RP D D Y
Sbjct: 113 E---EIRATMLAR--HDTLFELGFEDERDVLTILNAAGHMPLPPYI--DRPDDEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL RL + G+++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSTRPGAVAAPTAGLHFDQPLLDRLRAKGVEMAFVTLHVGAGTFQPVRVESIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN--PWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A P+ T IFI
Sbjct: 226 HSEYAEVPQAVVDAVLACKARGNRVIAVGTTSVRSLESAAAASQSALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G T Y A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALITNFHLPESTLIMLVSAFAGYRHTLDAYHEAVAQQYRFFSYGDAMYITR 345
>gi|317404681|gb|EFV85073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter xylosoxidans C54]
Length = 351
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 137/361 (37%), Positives = 196/361 (54%), Gaps = 27/361 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V +FD++LPP IA P R +RL+ + + D +DL L D +VFN
Sbjct: 6 VSDFDYELPPELIAQTPAAQRTGSRLLHLDGAS----QLHDRQFADLEKLLRPGDLLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + + + R SK G +L
Sbjct: 62 DTRVIKARLAGHKI-----TGGKVEVLVERITDTDRALAHVRASKSPGAGMVLRLADAFD 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L E L + + G PLPPYI DA D YQT
Sbjct: 117 ATVL---------GREGELFDIRFPGPVLELLDAHGATPLPPYITHA--ADAGDDDRYQT 165
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L RL ++G++ FVTLHVGAGTF PV+V++ DH+MH+
Sbjct: 166 VYAREPGAVAAPTAGLHFDQPTLDRLAALGVERAFVTLHVGAGTFQPVRVDNLADHVMHA 225
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPW------SGFTNI 295
E + T A+ + ++RGGR+++VGTTS+R LE+A + +G P G T +
Sbjct: 226 EWFTVPQATVDAIAATRARGGRVIAVGTTSVRALESAAAQTEGRTAPGLPLAAAQGDTRL 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGY++R +D L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD
Sbjct: 286 FITPGYQYRVIDALVTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAQRYRFFSYGDAMF 345
Query: 356 L 356
+
Sbjct: 346 I 346
>gi|115350667|ref|YP_772506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia ambifaria AMMD]
gi|122323978|sp|Q0BI51|QUEA_BURCM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115280655|gb|ABI86172.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria AMMD]
Length = 355
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 193/361 (53%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V P + D +LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPERTASRLLEVDH-TVEPARLVDRNFVELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+ G + +I + ++ R SK G L
Sbjct: 63 DTRVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGTGTTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F + L I G +PLPPYI DA D YQT
Sbjct: 118 ------VTVGERVEPFFTLHFPQPCLTL---IEQHGRLPLPPYIEHD--ADANDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDLPLLEQLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|325981733|ref|YP_004294135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosomonas sp. AL212]
gi|325531252|gb|ADZ25973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosomonas sp. AL212]
Length = 351
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 148/360 (41%), Positives = 197/360 (54%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LPP IA P R +RL+ + D L ++LP FL + D +V
Sbjct: 8 MKTQDFDFYLPPGLIAQFPAEQRTGSRLLYLD---GITNHWQDALFTNLPDFLRAGDVLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + R S K L
Sbjct: 65 FNDTQVIKARLLGKKAS-----GGKVEVLVERVLDDRHVVATIRASHAPKLDSQLVLAD- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TVI + L + + G +PLPPYI RP D Y
Sbjct: 119 ----AISLTVIAREQEFYTL--RFEHEKTVAELLDSYGQLPLPPYI--ARPATMTDEARY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF ++L +L +IG+ + +VTLHVGAGTF P++VE+ DHIM
Sbjct: 171 QTVYARNPGAVAAPTAGLHFDVDMLEQLRAIGVTMAYVTLHVGAGTFQPIRVENIVDHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
H E I T A+ K GGRI++VGTTSLR LE + G + G T IFITP
Sbjct: 231 HRETYHIPQFTVDAIKQAKISGGRILAVGTTSLRALEACASLHQGGLVAGYGDTRIFITP 290
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYRF+ +D L++NFHLP STLLMLVSAF G+E ++ YQHAI YRF+SYGD L+ +K
Sbjct: 291 GYRFQIIDRLLTNFHLPCSTLLMLVSAFAGMENIRQAYQHAIKGQYRFFSYGDAMLIERK 350
>gi|294782568|ref|ZP_06747894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 1_1_41FAA]
gi|294481209|gb|EFG28984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 1_1_41FAA]
Length = 351
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 134/355 (37%), Positives = 200/355 (56%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 13 LSDYDYFLPEELIGQKPREPRDSAKLMLINRKTG---EIEHKHFYNIIDYLQKGDVLVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIYGYKES-----GGVLEILLIKRISIDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK + YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKFYYEG-SFEEVLDKLGSMPLPPYITRK----LENKDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ E+ +H MH
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLKKISEKGIEIVDIFLEVGLGTFRPVQTENVLEHKMHE 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+N K++G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 237 ESFEISEKAAKAINEAKAQGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYQ 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSA E+ ++Y+ A+ Y F+S+GD+ ++
Sbjct: 297 FKIVDALITNFHLPKSTLLMLVSALYDREKMLEIYKLAVKEEYHFFSFGDSMFIY 351
>gi|227537334|ref|ZP_03967383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33300]
gi|300769814|ref|ZP_07079694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33861]
gi|227242837|gb|EEI92852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33300]
gi|300763265|gb|EFK60081.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33861]
Length = 349
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 133/361 (36%), Positives = 192/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD ARLMV+H + I + D+ + + D ++
Sbjct: 1 MKLSQFKFNLPESLLASEPSEQRDEARLMVLHRDSG---KIEHKIFKDVLDYFDDKDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A++ G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARMYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + I +F + E R I ++G PLP YI R D
Sbjct: 114 DDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRRNIEILGETPLPKYIK--RKATPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ L+ RL G+ VTLHVG GTF V+VED
Sbjct: 169 KYRYQTIYAKNEGAVAAPTAGLHFSRELMKRLELKGVDFAEVTLHVGLGTFRTVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I A+ +N R+ +VGTTS+R +E++ + D + S +T+ F
Sbjct: 229 KHKMDSEQFIITEEAARIVNKGIDNKRRVCAVGTTSMRAIESSVSADRHLKAASDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLL++++AF G E Y+ A+ YRFYSYGD L+
Sbjct: 289 IYPPYDFSIANSMITNFHTPESTLLVMIAAFAGYENVMNAYEVAVKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|307728505|ref|YP_003905729.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1003]
gi|307583040|gb|ADN56438.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1003]
Length = 352
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 144/363 (39%), Positives = 201/363 (55%), Gaps = 22/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVH--PNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V P+ ++D S+LP +N+ D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLEVDNAPDADRAARLTDRRFSELPECINAGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + V + R SK + G +
Sbjct: 64 FNDTKVLKARFLGQKAS-----GGKIEVLVERLVGERTALAQIRASKSPQPGTTIRLAD- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L + I G +PLPPYI D+ D Y
Sbjct: 118 ----AFDVTVGERVEPFYTLHF----PADCLTLIEQYGRLPLPPYIEHD--PDSTDETRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L RL + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 168 QTVYAQNPGAVAAPTAGLHFDDALFERLDARGVQRATLTLHVGAGTFQPVRVENLAEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE + A + + ++RG R+++VGTTS+R LE A + + S T+IF
Sbjct: 228 HSEWYHLPQSLADKIAATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAAASTETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 288 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEQRYRFFSYGDAMLL 347
Query: 357 FQK 359
++
Sbjct: 348 TRR 350
>gi|260494286|ref|ZP_05814417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_33]
gi|260198432|gb|EEW95948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_33]
Length = 348
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 132/355 (37%), Positives = 198/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 10 LSDYDYFLPEELIGQKPREPRDSAKLMLINRKTGS---IEHKHFYNIVDYLQKGDVLVRN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 67 ATKVIPARIFGHKD-----TGGVLEILLVKRISLDTWECLLKPAKKLKLGQKLYIGENK- 120
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK + YQT
Sbjct: 121 --ELIAELLEIKEDGNRILKFYHEG-SFEEILDKLGSMPLPPYITRK----LENKDRYQT 173
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+++ + L VG GTF PV+ + +H MH
Sbjct: 174 VYAQRGESVAAPTAGLHFTEELLKKILDKGVEIVDIFLEVGLGTFRPVQTVNVLEHKMHE 233
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 234 ESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYK 293
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 294 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 348
>gi|282889609|ref|ZP_06298150.1| hypothetical protein pah_c002o060 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500532|gb|EFB42810.1| hypothetical protein pah_c002o060 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 345
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 190/356 (53%), Gaps = 17/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + FDLP IA P PRD +RLMVV I +L FL D+++F
Sbjct: 7 HLSSYHFDLPQELIAQHPCTPRDHSRLMVVDRGSGILSEIP---FYELADFLQKGDSLIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+L G R + L + S +W V +P K + G + F
Sbjct: 64 NNTKVIPARLLGKRL-----TGGQAEVFLKAQRSDGTWEVLVKPGKQLGLGSKVIFSE-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++D G + F G + + + G IPLP YI R+ + YQ
Sbjct: 117 ---TFFCEIVDVLPEGARCVRFFHEG-DFNQVLEQHGKIPLPKYIKREPDVKEDG-ERYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHFT LL+R+ S G++ VTLHVG GTF+P+KVED DH MH
Sbjct: 172 TVYAAHPGAVAAPTAGLHFTQPLLNRITSKGVERIEVTLHVGLGTFLPIKVEDIRDHQMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I AQ LN GR + +GTTS R LE+A II P T+IFI+PGY
Sbjct: 232 DESFLISVQAAQQLN--NPSSGRQICIGTTSCRALESAAGHSSIIQPGEYSTDIFISPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+FR + L++NFHLP S+LL+LVS F G E ++ YQ A+ +RFYSYGD L+
Sbjct: 290 QFRKMQALLTNFHLPCSSLLVLVSTFAGHELIREAYQKAVKEKFRFYSYGDAMLIL 345
>gi|322514365|ref|ZP_08067414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus ureae ATCC 25976]
gi|322119735|gb|EFX91777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus ureae ATCC 25976]
Length = 361
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 132/360 (36%), Positives = 191/360 (53%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP A P R ++RL+ ++ +D SDL + D ++
Sbjct: 1 MLVSDFHFNLPDELTARYPTSERTASRLLHLNGETG---EFADKQFSDLLTHIEEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEQRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + + L + G IPLPPYI RP + D Y
Sbjct: 113 KLGEGNGFKAIMATRHEALFELHFNEEQPLFDLLQQAGHIPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDTPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+IF
Sbjct: 231 HAEYAEVSQDVVDQILATKAAGKRVIAVGTTSVRSIESAAQAAEQEGKLIAPFFSDTSIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG FR VD L++NFHLP+STL+MLVSAF G T Y+HA+ YRF+SYGD +
Sbjct: 291 LYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMNAYKHAVEAKYRFFSYGDAMFI 350
>gi|294785109|ref|ZP_06750397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_27]
gi|294486823|gb|EFG34185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_27]
Length = 348
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 131/355 (36%), Positives = 195/355 (54%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM++ I ++ +L D +V N
Sbjct: 10 LSDYDYFLPEELIGQKPREPRDSAKLMLIDRKTGS---IEHKHFYNIVDYLQKGDVLVRN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R S ++W +P+K +K G L+
Sbjct: 67 ATKVIPARIFGHKD-----TGGVLEILLIKRTSLDTWECLLKPAKKLKLGQKLYIGENK- 120
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK + YQT
Sbjct: 121 --ELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRK----LENKDRYQT 173
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ + +H MH
Sbjct: 174 VYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTVNVLEHKMHE 233
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ ++G + T IFI PGY+
Sbjct: 234 ESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDKNGKLIAQKKDTGIFIYPGYK 293
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 294 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 348
>gi|254253195|ref|ZP_04946513.1| Queuosine biosynthesis protein [Burkholderia dolosa AUO158]
gi|124895804|gb|EAY69684.1| Queuosine biosynthesis protein [Burkholderia dolosa AUO158]
Length = 405
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 142/361 (39%), Positives = 198/361 (54%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V P + P + D ++LP+ + D +VFN
Sbjct: 54 LSDFDFNLPPELIAQTALPERTASRLLDVDPAV-EPARLVDRRFAELPSCIARGDLLVFN 112
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 113 DTKVLKARFFGQKAS-----GGKIEVLVERVTGTHTALAQIRASKSPGAGTTLRLADAFD 167
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F ++L I G +PLPPYI DA D YQT
Sbjct: 168 ------VTVGERVEPFFTLYFPQPCLDL---IERYGRLPLPPYIEHD--PDATDETRYQT 216
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL++L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 217 VYASNPGAVAAPTAGLHFDEPLLAKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMHS 276
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTSLR LE A + T+IFIT
Sbjct: 277 EWYDLPQSLVDKIAATRARGGNVIAVGTTSLRALEAAARSADEAGRPLAATQAETDIFIT 336
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL +
Sbjct: 337 PGYRFRVVDRLITNFHLPKSTLMMLVSAFAGIETIRAAYRHAIERRYRFFSYGDAMLLTR 396
Query: 359 K 359
+
Sbjct: 397 R 397
>gi|192360885|ref|YP_001981943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cellvibrio
japonicus Ueda107]
gi|190687050|gb|ACE84728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cellvibrio
japonicus Ueda107]
Length = 364
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 133/364 (36%), Positives = 191/364 (52%), Gaps = 23/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P R +RL+ + + DL +N D +V
Sbjct: 5 MRRQDFYYELPDHLIARVPASERRGSRLLQLDGATGARV---HGQFPDLLDLVNPGDLMV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + + +S + R SK K + Q
Sbjct: 62 FNNTRVIPARLFGQKA-----TGGAVEILVERVLSDKRVLAHTRASKAPKVDSQVIL--Q 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG S + D E L + + +G +PLPPYI R ++ Y
Sbjct: 115 DGTSVILRARQDALFEWEFL-----TDQSALEVMEQIGHMPLPPYIDRADAVED--RERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + QG+VAAPTAGLHF +L +L G+++ FVTLHVGAGTF ++V++ +H M
Sbjct: 168 QTVYGEKQGAVAAPTAGLHFDELMLQQLRDKGVQIAFVTLHVGAGTFQNMRVDNIREHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT------EDGIINPWSGFTN 294
H EI + + + + K+ G R+V+VGTTS+R LE+A G I P+ G T+
Sbjct: 228 HGEIMEVSPEVCELVRATKAAGKRVVAVGTTSVRSLESAAHGYLDPVHKGSIQPYRGETS 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+ VD L++NFHLP+STL+MLVSAF G T Y A++ YRF+SYGD
Sbjct: 288 IFIYPGYTFQVVDALVTNFHLPESTLIMLVSAFAGYSHTMAAYADAVARQYRFFSYGDAM 347
Query: 355 LLFQ 358
+ +
Sbjct: 348 FITR 351
>gi|172059699|ref|YP_001807351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia ambifaria MC40-6]
gi|238689181|sp|B1YTH0|QUEA_BURA4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|171992216|gb|ACB63135.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria MC40-6]
Length = 355
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 193/361 (53%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V P + D +LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPERTASRLLEVDH-TVEPARLVDRNFVELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+ G + +I + ++ R SK G L
Sbjct: 63 DTRVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F + L I G +PLPPYI DA D YQT
Sbjct: 118 ------VTVGERVEPFFTLHFPQPCLTL---IEQHGRLPLPPYIEHD--ADASDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL RL ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDLPLLERLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDQRYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|302338528|ref|YP_003803734.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Spirochaeta smaragdinae DSM 11293]
gi|301635713|gb|ADK81140.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Spirochaeta smaragdinae DSM 11293]
Length = 346
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 183/359 (50%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P R ++R++VV SD P + + +V
Sbjct: 1 MKTSDFSFDLPEELIAQTPSEKRGASRMLVVDRKSGT---FRHLHTSDFPEIVEDDVLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
N++KV A+L G + ++ L S + W+ +K + G F
Sbjct: 58 VNDSKVRKARLFG-----SSETGGKVEFLLLHPDSQDHCLWTAMVSKAKKQRPGKRFLFP 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q + +EA D + FSI + + + G IPLPPYI +R D
Sbjct: 113 -QGIEGIIEAINGDSTGP-YRRVRFSIPVDD--AYLEVNGHIPLPPYI--RREDTELDEE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ GSVAAPTAGLHFT + L I V +TLHVG GTF+PV+ E+ DH
Sbjct: 167 RYQTVYARHPGSVAAPTAGLHFTEETFTALKKRSIPVARLTLHVGLGTFLPVRSEEITDH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
MH E I A +N K G +IV+VGTTS+R LE+A TE+G I S T +FI
Sbjct: 227 EMHRERYEISQDVADTINRAKYDGRKIVAVGTTSVRTLESAWDTEEGCIRTGSAETRLFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ VD L +NFH PKSTLLMLVSAF G E Y A+ YRF+SYGD +
Sbjct: 287 YPGYTFKVVDRLFTNFHTPKSTLLMLVSAFAGKELIDAAYAEALKERYRFFSYGDAMYI 345
>gi|225011595|ref|ZP_03702033.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-2A]
gi|225004098|gb|EEG42070.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-2A]
Length = 349
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 142/361 (39%), Positives = 197/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP + +A RP RD +RLMV++ I H D+ + + D +V
Sbjct: 1 MKLSNFQFELPNALLAQRPAADRDESRLMVLNRK---EETIEHHSFKDVINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLFGNK----EKTGARIEVFLLRELNQEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++ +G PLP YI RPI+ D
Sbjct: 114 EDES---LVAEVIDNTTSRGRTLRFLFDGSYAEFRTKLKELGQTPLPKYIK--RPIEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI + +TLHVG GTF PV+VED
Sbjct: 169 QERYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGIDLAELTLHVGLGTFSPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE IDA +N+ + RI +VGTT +R LE++ + G++N + G+T+ F
Sbjct: 229 KHKMDSEELIIDAIAVAKVNNALATKKRICAVGTTVMRGLESSVSSAGLLNEYQGWTHKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM++SAF + K Y+ AI Y FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMITNFHTPKSTLLMMISAFADPDFIKHAYKVAIKEKYNFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|218262342|ref|ZP_03476847.1| hypothetical protein PRABACTJOHN_02521 [Parabacteroides johnsonii
DSM 18315]
gi|218223437|gb|EEC96087.1| hypothetical protein PRABACTJOHN_02521 [Parabacteroides johnsonii
DSM 18315]
Length = 349
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 124/361 (34%), Positives = 186/361 (51%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +RLMVV+ I + DL ++ D +
Sbjct: 1 MKLSKFKFNLPQELIALHPAKNRDESRLMVVNRKTG---EIEHKVFKDLLSYFGEKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGARIEVFLLRELNEDLRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP YI RP++ D
Sbjct: 114 EDDS---MVAEVIDNTTSRGRTLRFLYDGNHDEFKKALYALGETPLPKYI--DRPVEPDD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ +A +G+V AP AGLHF+ L+ RL + ++TLH G G F + VED
Sbjct: 169 EDRYQNIFATEEGAVVAPAAGLHFSRELMKRLEIKDCQFAYLTLHSGLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ++ +N+ K G +I +VGT+ +R +ETA + DG + + G+TN F
Sbjct: 229 KHKMDSEQMVVNGDVVNIVNTAKDNGRQICAVGTSVMRAIETAVSTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F +++NFH+P STLLM+ ++F G + Y+ A+ Y F +YGD L+
Sbjct: 289 IFPPYDFSVASSMITNFHMPLSTLLMMTASFGGYDLIMDAYEVALKEKYSFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|319764640|ref|YP_004128577.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans BC]
gi|330826897|ref|YP_004390200.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans K601]
gi|317119201|gb|ADV01690.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans BC]
gi|329312269|gb|AEB86684.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans K601]
Length = 367
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 140/366 (38%), Positives = 200/366 (54%), Gaps = 23/366 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LP + IA P R S+RL+ SD + +LPA L D +VFN
Sbjct: 10 LSDFDFALPEALIAQHPAPVRSSSRLL-----DGRAAPPSDRIFHELPALLREGDLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + + + ++ N + + SK G +H
Sbjct: 65 DTRVVKARVFGEKAS-----GGRLELLIERVLAGNEVVAHMKVSKKPMPGATVHMAGGKA 119
Query: 123 QSRLEATVIDKWNT-GEILLVFSISG---IELERQISLVGTIPLPPYIAR-----KRPID 173
+AT++ +W L F++ G + G +PLPPYI R P +
Sbjct: 120 AGGFDATLLSRWPDADGPLFRFALHGPAGETPWELMERHGHLPLPPYIERQQNAGHDPDE 179
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT +A+ G+VAAPTA LHF +L+ L G++ VTLHVGAGTF PVK E
Sbjct: 180 AEDAERYQTVFARAPGAVAAPTAALHFDDAVLAALAERGVQRASVTLHVGAGTFQPVKTE 239
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+H MHSE + T AL + R GR+V+VGTT++R LE+ +G T
Sbjct: 240 SLAEHRMHSEWYEVPLATLAALERCRMRAGRVVAVGTTTVRTLESWARSGQT----TGET 295
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG++F+ V +L++NFHLPKSTL+MLVSAF G E ++Y+HAI YRF+SYGD+
Sbjct: 296 DIFITPGFQFQVVQLLVTNFHLPKSTLMMLVSAFAGYEHVMQLYRHAIEERYRFFSYGDS 355
Query: 354 SLLFQK 359
LL +K
Sbjct: 356 MLLERK 361
>gi|121592807|ref|YP_984703.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Acidovorax
sp. JS42]
gi|120604887|gb|ABM40627.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Acidovorax
sp. JS42]
Length = 366
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 138/367 (37%), Positives = 199/367 (54%), Gaps = 23/367 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P R +RL+ +D + +LP L D +VFN
Sbjct: 13 LSDFDFELPELLIAQHPAPQRSGSRLL-----DGRTAPPTDRIFRELPDLLQPGDLLVFN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + ++ + ++ N + + SK G LH
Sbjct: 68 DTRVVKARVFGEKAS-----GGKLELLIERVLTGNEVVAHMKVSKKPLPGATLHLAGGAA 122
Query: 123 QSRLEATVIDKWNTGEILLVFS----ISGIELERQISLVGTIPLPPYIARK-----RPID 173
+AT++ ++ + L +G + G +PLPPYI R+ P
Sbjct: 123 AGGFDATLLGRYPDADGPLFRLALRGPAGESPWELMERHGHLPLPPYIERQQAGGNDPHA 182
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A+ G+VAAPTA LHF +L+RL GI+ VTLHVGAGTF PVK E
Sbjct: 183 GEDSERYQTVFARAPGAVAAPTAALHFDDAVLARLAERGIERASVTLHVGAGTFQPVKTE 242
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE + T AL + RGGR+V+VGTT++R LE+ +G T
Sbjct: 243 NLAEHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWAASG----QATGDT 298
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG+ F+ VD+L++NFHLPKSTL+MLVSAF G E +Y+HA++ YRF+SYGD
Sbjct: 299 SIFITPGFSFQVVDLLLTNFHLPKSTLMMLVSAFAGYEHIMHLYRHAVAQRYRFFSYGDC 358
Query: 354 SLLFQKR 360
LL + R
Sbjct: 359 MLLERPR 365
>gi|254302820|ref|ZP_04970178.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
gi|148323012|gb|EDK88262.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 343
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 131/355 (36%), Positives = 196/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I RP PRDSA+LM++ + ++ +L D +V N
Sbjct: 5 LSDYDYFLPEELIGQRPREPRDSAKLMLIDRKN---ESVEHKKFYNIIDYLQKGDVLVRN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R++ ++W +P+K +K G L+
Sbjct: 62 ATKVIPARIFGHKD-----TGGVLEILLIKRITLDTWECLLKPAKKLKLGQKLYIGENK- 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI K + YQT
Sbjct: 116 --ELIAELLEIKEDGNRILKFYHEG-SFEEILDKLGSMPLPPYITSK----LENKDRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ E+ +H MH
Sbjct: 169 VYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTENVLEHKMHE 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 229 ESFEISEKVAKIINEAKAEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYK 288
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 289 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 343
>gi|322834079|ref|YP_004214106.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rahnella
sp. Y9602]
gi|321169280|gb|ADW74979.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rahnella
sp. Y9602]
Length = 356
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 132/360 (36%), Positives = 204/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+L S IA P R RL+ + ++ + +D+ ++ D +V
Sbjct: 1 MRVADFSFELSESLIARYPQTQRSGCRLLSLDGPSG---ELTHGVFTDILDKIHPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L +
Sbjct: 58 FNNTRVIPARVFGRKVS-----GGKIEVLVERVLDTHRVLAHVRASKSPKPGAELLLGDK 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---DIKATMVAR--HDTLFELEFNEDRDVFTLLNEIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF L+ L + G++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSERPGAVAAPTAGLHFDEPLMDALKAKGVEFAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG +V+VGTTS+R LE+A +ED +I P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNNVVAVGTTSVRSLESAAKASEDALIAPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ Y F+SYGD + +
Sbjct: 286 PGYHYQVIDSLITNFHLPESTLIMLVSAFAGYKNTMNAYHQAVAEQYHFFSYGDAMFINR 345
>gi|262068283|ref|ZP_06027895.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium periodonticum ATCC 33693]
gi|291378021|gb|EFE85539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium periodonticum ATCC 33693]
Length = 343
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 134/355 (37%), Positives = 200/355 (56%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 5 LSDYDYFLPEELIGQKPREPRDSAKLMLINRKTG---EIEHKHFYNIIDYLQKGDILVRN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 62 ATKVIPARIYGHKES-----GGVLEVLLIKRISIDTWECLLKPAKKLKLGQKLYIGENK- 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK + YQT
Sbjct: 116 --ELIAELLEIKEDGNRILKFYYEG-SFEEVLDKLGSMPLPPYITRK----LENKDRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ E+ +H MH
Sbjct: 169 VYAQRGESVAAPTAGLHFTEELLRKISEKGIEIVDIFLEVGLGTFRPVQTENVLEHKMHE 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+N K++G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 229 ESFEISEKAAKAINEAKAQGRRIISVGTTATRALESSVDENGKLIAQKRDTGIFIYPGYQ 288
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSA E+ ++Y+ A+ Y F+S+GD+ ++
Sbjct: 289 FKIVDALITNFHLPKSTLLMLVSALYDREKILEIYKMAVKEEYHFFSFGDSMFIY 343
>gi|255532466|ref|YP_003092838.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pedobacter
heparinus DSM 2366]
gi|255345450|gb|ACU04776.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pedobacter
heparinus DSM 2366]
Length = 349
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 137/361 (37%), Positives = 195/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD ARLMV+H + I + D+ + + D ++
Sbjct: 1 MKLSQFKFNLPESLVANNPSEQRDEARLMVLHKDSG---KIEHKIFKDVLDYFDDQDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + I +F + E + I ++G PLP YI R A+D
Sbjct: 114 DDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRKNIEILGETPLPKYIK--RKATAQD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ L+ RL GI VTLHVG GTF V+VED
Sbjct: 169 KERYQTIFAKHEGAVAAPTAGLHFSRELMKRLELKGINFAEVTLHVGLGTFRSVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I+ A +N R RI +VGTTS+R +E+A + + + +T+ F
Sbjct: 229 KHKMDSEQFIIEQKDADIVNKAIERKKRICAVGTTSMRAIESAVSSGRTLKAANDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLLM+VSAF G + + Y+ A+ YRFYSYGD L+
Sbjct: 289 IFPPYDFSIANSMITNFHTPESTLLMMVSAFGGYDYVRHAYEVALKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|169632430|ref|YP_001706166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii SDF]
gi|238688246|sp|B0VRB1|QUEA_ACIBS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169151222|emb|CAO99905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Acinetobacter baumannii]
Length = 351
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 127/359 (35%), Positives = 183/359 (50%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + + + + S K G L +
Sbjct: 57 LNDTKVMKARLKGKR-----TTGGAIEILVERMPNHTTAYCHIKASNSPKAGAELFVGAD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + + G +P+PPY R + D Y
Sbjct: 112 NIPVIVRGRHEN--------LFVVEFSQPILPVLEQYGQLPIPPYFN--REAEEIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ Y F+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYHFFSYGDAMLI 340
>gi|312116034|ref|YP_004013630.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodomicrobium vannielii ATCC 17100]
gi|311221163|gb|ADP72531.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodomicrobium vannielii ATCC 17100]
Length = 391
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 181/358 (50%), Positives = 241/358 (67%), Gaps = 6/358 (1%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LP S IALRP PRD+ARL+ V P + P +S+ + DLPAF D +VF
Sbjct: 29 HLTDFDFELPKSAIALRPASPRDAARLLRVDP--AAPQPLSEATIRDLPAFFRPGDIMVF 86
Query: 62 NNTKVITAQLNGVRFCHINRREK-EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V++A+L+G R ++S L R + SW +ARP++ ++ GD +HF +
Sbjct: 87 NDTRVLSAELSGTRPPRDADAPAVDVSLNLIEREASGSWKAFARPARRLRPGDAIHFETG 146
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
SRL V+ K + GEI L + G +E + G +PLPPYIAR+RP D RD DY
Sbjct: 147 GHASRL--IVVAKSDEGEITLA-APDGDSVEAIMQRHGAMPLPPYIARQRPADERDRSDY 203
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT LL+RL GI+ FVTLHVGAGTF+PVK E +DH +
Sbjct: 204 QTVFARNEGAVAAPTAGLHFTPELLARLAERGIETAFVTLHVGAGTFLPVKSETVEDHEI 263
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I TA+A+N+ + RGGRI++ GTTSLR+LETAT EDG I P GFT IFI PG
Sbjct: 264 HAEWFEIGDATARAINAARERGGRIIAAGTTSLRVLETATREDGFIEPAKGFTRIFIKPG 323
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ FR+ D+L++NFHLPKSTL MLV AF G + K+ Y HA+ +RFYSYGD LL +
Sbjct: 324 HCFRSADLLVTNFHLPKSTLFMLVCAFSGTDLMKRAYAHAVEAGFRFYSYGDACLLAR 381
>gi|150003742|ref|YP_001298486.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
gi|254881029|ref|ZP_05253739.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|294777441|ref|ZP_06742892.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus PC510]
gi|319640036|ref|ZP_07994763.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
gi|166216700|sp|A6KZK0|QUEA_BACV8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149932166|gb|ABR38864.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
gi|254833822|gb|EET14131.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|294448509|gb|EFG17058.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus PC510]
gi|317388314|gb|EFV69166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
Length = 351
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 196/363 (53%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPAKYRDESRLMVVHKSTG---KIEHKVFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP +I +RP++ D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGSHDEFKKALYALGEAPLPSFI--RRPVEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V APTAGLHF+ L+ R+ GI FVT+H G G F + VED
Sbjct: 169 AERFQTIFAKNEGAVTAPTAGLHFSRELMKRMEIKGIDFAFVTMHAGLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +++A + +N+ K G I +VGTT +R +ETA DG + + G+TN F
Sbjct: 229 KHKMDSEQMYVNADACRIVNNAKDEGKNICAVGTTVMRTIETAVGTDGHLKEFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLP STLLMLV+A+ G + + Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVANSMVTNFHLPLSTLLMLVAAYGGYDLVMEAYHTALKEDYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LDK 351
>gi|212692507|ref|ZP_03300635.1| hypothetical protein BACDOR_02003 [Bacteroides dorei DSM 17855]
gi|237709173|ref|ZP_04539654.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
gi|237724349|ref|ZP_04554830.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D4]
gi|265752700|ref|ZP_06088269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
gi|212664982|gb|EEB25554.1| hypothetical protein BACDOR_02003 [Bacteroides dorei DSM 17855]
gi|229437218|gb|EEO47295.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
dorei 5_1_36/D4]
gi|229456869|gb|EEO62590.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
gi|263235886|gb|EEZ21381.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
Length = 351
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 196/363 (53%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPAKYRDESRLMVVHKSTG---KIEHKVFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP +I +RP++ D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGSHDEFKKALYALGEAPLPSFI--RRPVEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V APTAGLHF+ L+ R+ GI FVT+H G G F + VED
Sbjct: 169 TERFQTIFAKNEGAVTAPTAGLHFSRELMKRMEIKGIDFAFVTMHAGLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +++A + +N+ K G I +VGTT +R +ETA DG + + G+TN F
Sbjct: 229 KHKMDSEQMYVNADACRIVNNAKDEGKNICAVGTTVMRTIETAVGTDGHLKEFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLP STLLMLV+A+ G + + Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVANSMVTNFHLPLSTLLMLVAAYGGYDLVMEAYHTALKEDYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LDK 351
>gi|117923911|ref|YP_864528.1| queuosine biosynthesis protein [Magnetococcus sp. MC-1]
gi|259551461|sp|A0L579|QUEA_MAGSM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|117607667|gb|ABK43122.1| Queuosine biosynthesis protein [Magnetococcus sp. MC-1]
Length = 363
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 202/360 (56%), Gaps = 19/360 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+DLP + IA RP+ PRD ARL+V S + D L L + D +V
Sbjct: 13 RLSHYDYDLPAAHIAQRPMEPRDHARLLV-----SRAQGVEDSRFDQLVEHLQAGDLLVL 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFFS 119
N+TKVI A+L G + + L + W R +K +K G + F
Sbjct: 68 NDTKVIPARLLGHKPS-----GGRVEIFLLKPDPQHPPLWRAMTRSNKPLKVGQRVEFGE 122
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
A ++++ G +L+ G+ L+ + G +PLPPYI+
Sbjct: 123 D-----FYAELVERQAEGHVLVALHAVGMGLDEAMQHYGQMPLPPYISGSDAQQD--KSR 175
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHFT L RL + G+ VTLHVG GTF PV+VED D H
Sbjct: 176 YQTVFARRDGAVAAPTAGLHFTDALFERLAAKGVTWCHVTLHVGLGTFQPVRVEDLDAHP 235
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E ++A + K+ GGR+V+VGTT++R LE++ + G++ G T +FI P
Sbjct: 236 MHGEWRQLEADAVAKIQRTKAAGGRVVAVGTTAVRTLESSVDDQGVLQASCGETRLFIRP 295
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYRF+ VD++++NFHLPKSTLLMLV+AF G ++ Y HA+ YRFYSYGDT+LL+ +
Sbjct: 296 GYRFKVVDLMLTNFHLPKSTLLMLVAAFVGRSRLRRDYAHAMGKNYRFYSYGDTTLLYPQ 355
>gi|89890087|ref|ZP_01201598.1| S-adenosylmethionine, tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium BBFL7]
gi|89518360|gb|EAS21016.1| S-adenosylmethionine, tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium BBFL7]
Length = 350
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 131/360 (36%), Positives = 188/360 (52%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F + LP + IA P RD +RLMV+H I + D+ + +D V
Sbjct: 1 MKLSQFGYKLPENLIAQHPAENRDESRLMVLHKKTG---EIEHKMFKDVLDYFEEDDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNT+V A+L G + + I L ++P W V P++ I+ G+ L+F
Sbjct: 58 TNNTRVFPARLYGNK----EKTGARIEVFLLRELNPTTKLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E +++ +G PLP R ++ D
Sbjct: 114 EDES---LVAEVIDNTTSRGRTLRFLFDGSYEEFRQKLKDLGETPLPR--ELGREVEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA +G+VAAP AGLHF+ +LL RL GI +T+H+G GTF PV+VED
Sbjct: 169 EERYQTIYATNEGAVAAPVAGLHFSKHLLKRLEIKGIHRTAITMHIGLGTFAPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I T +N + +VGTT++R LE+A + DG +N + G+TN F
Sbjct: 229 KHKMDSEQAEITEETCAIVNKAIDTRKNVCAVGTTTMRTLESAVSSDGHLNTFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTL+M +AF G + KK Y AI Y+F +YGD L+
Sbjct: 289 IFPPYDFSIANAMITNFHHPKSTLMMQAAAFAGYDLLKKAYDVAIKEEYKFSTYGDAMLI 348
>gi|33592191|ref|NP_879835.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
pertussis Tohama I]
gi|46576956|sp|Q7VZ81|QUEA_BORPE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33571836|emb|CAE41349.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
pertussis Tohama I]
Length = 347
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 197/356 (55%), Gaps = 22/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P R +RL+ + + D DL L +D +VFN
Sbjct: 7 LADFDYHLPPELIAQSPAAERGGSRLLHLD----AASRLHDRRFPDLAGLLRPHDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + +P+ + R SK G L
Sbjct: 63 DTRVIKARLTGQKA-----TGGKVEVLVERITAPDRALAHVRASKSPGPGMRLRLAE--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
EA V+ + L + + G PLPPYI DA D YQT
Sbjct: 115 --AFEAEVLGREGE----LFDLRFPAPVLDLLDAHGATPLPPYITHA--ADATDERRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HIMH+
Sbjct: 167 VYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHIMHA 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFITPG 300
E + T A+ ++ GGRIV+VGTTS+R LE+A + DG + G T +FITPG
Sbjct: 227 EWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFITPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YR+RAVD L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD +
Sbjct: 287 YRYRAVDALLTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAERYRFFSYGDAMFI 342
>gi|323524790|ref|YP_004226943.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1001]
gi|323381792|gb|ADX53883.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1001]
Length = 352
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 199/363 (54%), Gaps = 22/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP--NLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V + + D S+LP ++ D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLQVDNAADAERAARLVDRRFSELPDCISPGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + + R SK + G +
Sbjct: 64 FNDTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPQPGTTIRLAD- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L + I G +PLPPYI DA D Y
Sbjct: 118 ----AFDVTVGERVEPFYTLHF----PADCLTLIEQHGRLPLPPYIEHD--PDAVDETRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L +RL + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 168 QTVYAQNPGAVAAPTAGLHFDESLFARLDAHGVERATLTLHVGAGTFQPVRVENLAEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE + A + + K+RG R+++VGTTS+R LE A + + S T+IF
Sbjct: 228 HSEWYHLPQSLADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGRPLGAASTETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 288 ITPGYKFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEQRYRFFSYGDAMLL 347
Query: 357 FQK 359
++
Sbjct: 348 TRR 350
>gi|237744129|ref|ZP_04574610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 7_1]
gi|229431358|gb|EEO41570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 7_1]
Length = 351
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 132/355 (37%), Positives = 198/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 13 LNDYDYFLPEELIGQKPREPRDSAKLMLINRKTGS---IEHKHFYNIVDYLQKGDVLVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIFGHKD-----TGGVLEILLVKRISLDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK + YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKFYHEG-SFEEILDKLGSMPLPPYITRK----LENKDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+++ + L VG GTF PV+ + +H MH
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLKKILDKGVEIVDIFLEVGLGTFRPVQTVNVLEHKMHE 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 237 ESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYK 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 297 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 351
>gi|149198170|ref|ZP_01875217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lentisphaera araneosa HTCC2155]
gi|149138772|gb|EDM27178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lentisphaera araneosa HTCC2155]
Length = 345
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 133/355 (37%), Positives = 186/355 (52%), Gaps = 14/355 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +++F+LP IA RP R +R+MV+ S ++ + P+FL D IV
Sbjct: 4 QLSDYNFNLPEELIAQRPPAQRQQSRMMVIDRQKSSREIVP---FENFPSFLKPGDLIVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+L G + ++ L W +P + ++ G + +
Sbjct: 61 NNTKVIPARLFGTK----KDSGGKVQALLCEERKTGLWQAMLKPGRRLRAGTEVLIENSA 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV +K G L+ FS ++ + G IPLPPY+ R DA D YQ
Sbjct: 117 TEY---FTVTEKLADGTYLIQFS--NPDVLHILDQFGHIPLPPYMN--REDDAEDRKRYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHFT + + G VTLH G GTF PV ED +H MH
Sbjct: 170 TVFADQPGAVAAPTAGLHFTDEVFAECAKNGADFADVTLHTGIGTFQPVSCEDLSEHQMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE +++ TA+ + K GGRI+++GTTS+R LET I+ G T IF+ P
Sbjct: 230 SEFYELNSVTAEKIRQAKKNGGRIIAIGTTSVRTLETCADPKNFISSGQGKTQIFLYPPK 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ + D L++NFHLPKSTLLML+S F EE K Y+ AI RF+SYGD L+
Sbjct: 290 QPQVTDCLLTNFHLPKSTLLMLISTFFPREEVLKAYEQAIEEKMRFFSYGDCMLI 344
>gi|332108485|gb|EGJ09709.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Rubrivivax benzoatilyticus
JA2]
Length = 344
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 137/357 (38%), Positives = 197/357 (55%), Gaps = 19/357 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R ++RL+ + D + +LP L D +VFN
Sbjct: 6 LSDFDFPLPPELIAQHPAPERSASRLL-----DGRGALPVDRVFRELPQLLAPGDLLVFN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L+G + + + + + + R SK + G + F
Sbjct: 61 DTRVIKARLHGEK-----PTGGSVEALVERVLGGHEVLAHLRASKSPRPGTTVRFAD--- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+A V+ + L + G +PLPPYI + + YQT
Sbjct: 113 --AFDAEVLGRDGVDGSLFHLRLPDDPFVLL-ERHGHVPLPPYITHEDAAEDV--ERYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTA LHF + +L+ L + G+K VTLHVGAGTF PV+ E+ D+H MH
Sbjct: 168 VFAARPGAVAAPTASLHFDAGVLAALDARGVKRAAVTLHVGAGTFQPVRAENLDEHRMHR 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E +DA T +A+ ++RGGRIV+ GTT+LR LE+A G + +G T++FI PG+
Sbjct: 228 ERWEVDAATVEAIRETRARGGRIVAAGTTTLRALESAAI-GGALEAGAGDTDLFIRPGFE 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
FR VD+L++NFHLPKSTLLMLVSAF G E +Y+HA+ YRF+SYGD LL ++
Sbjct: 287 FRVVDLLVTNFHLPKSTLLMLVSAFTGFEHMHALYRHAVEARYRFFSYGDAMLLERR 343
>gi|312880164|ref|ZP_07739964.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Aminomonas
paucivorans DSM 12260]
gi|310783455|gb|EFQ23853.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Aminomonas
paucivorans DSM 12260]
Length = 355
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 188/359 (52%), Gaps = 22/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V + +DLP IA P PRDS+RL+V+ DL +L D +V N
Sbjct: 15 VSAYQYDLPEELIAQDPAEPRDSSRLLVLERGRGVAA---HRTFRDLEEYLREGDLLVLN 71
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQ 120
+T+V A+L + + + + P N W+ RP + + G L
Sbjct: 72 DTRVRPARLRARKTSS-----GRVEILVLRPLDPASNLWTALVRPGRRVPPGTPLLL--- 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ E V ++ G L + R +G +PLPPYI R Y
Sbjct: 124 --EDGTEVRVEERLEDGLRALRLPQ-ETDPTRLFRRLGEVPLPPYITRSVAP----AERY 176
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT Y +GS AAPTAGLHFT+ LL RL + GI FVTL VG GTF PV+ E +DH
Sbjct: 177 QTVYSRPDREGSAAAPTAGLHFTAPLLKRLEARGIGQAFVTLDVGLGTFRPVQTERAEDH 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+MH E + TA+A+ + RGGR+V+VGTT +R LET E+G + P T ++I
Sbjct: 237 VMHLERCSLGEETAEAIRQTRRRGGRVVAVGTTVVRTLETFANEEGQVLPGERDTRLYIR 296
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRFR VD L++NFHLP+STLLMLV+AF G E + Y+ A+ YRF+S+GD +L
Sbjct: 297 PGYRFRVVDGLITNFHLPRSTLLMLVAAFGGYEPVLEAYREAVQLRYRFFSFGDAMILL 355
>gi|258541319|ref|YP_003186752.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pasteurianus IFO 3283-01]
gi|256632397|dbj|BAH98372.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-01]
gi|256635454|dbj|BAI01423.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-03]
gi|256638509|dbj|BAI04471.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-07]
gi|256641563|dbj|BAI07518.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-22]
gi|256644618|dbj|BAI10566.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-26]
gi|256647673|dbj|BAI13614.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-32]
gi|256650726|dbj|BAI16660.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653717|dbj|BAI19644.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-12]
Length = 360
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 162/355 (45%), Positives = 224/355 (63%), Gaps = 14/355 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++FDF LP S IA P PR++ARL+ + + P + +D + DLP+ L D +V
Sbjct: 5 RTEDFDFHLPESLIAQEPARPREAARLL----DATQPDMFADRHIRDLPSLLKRGDLLVA 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT VI AQL+G+R E +I TL SW V R ++ +K GD + F
Sbjct: 61 NNTAVIRAQLHGLR------GEAKIGITLDQIQPDGSWHVLVRNARRLKVGDTIAFPGVQ 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+R++A G +L FS G + + G + LPPYI R A+D DY
Sbjct: 115 DTARVQALE----PGGGAVLQFSAEGDAFDAFLQKAGALALPPYIHRPEGPTAQDTSDYA 170
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T + + +G+VAAPTAGLHFT LL + + G + +TLHVGAGTF+PV+ + +H MH
Sbjct: 171 TIFERNKGAVAAPTAGLHFTPALLKAIDATGAQRCTLTLHVGAGTFLPVREAEISEHKMH 230
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE G I TA+ +N+ + GGRI+++GTTSLRLLETAT E+GI++P+ G T+IFI PGY
Sbjct: 231 SERGIITPETAERINATRKAGGRIIAIGTTSLRLLETATDENGIVHPFDGTTSIFIRPGY 290
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+FRAVD+L++NFHLP+STL MLVSAF G+E +++Y HA++ YRFYSYGD LL
Sbjct: 291 QFRAVDMLLTNFHLPRSTLFMLVSAFAGVERARQIYAHAVASGYRFYSYGDACLL 345
>gi|154494349|ref|ZP_02033669.1| hypothetical protein PARMER_03704 [Parabacteroides merdae ATCC
43184]
gi|154085793|gb|EDN84838.1| hypothetical protein PARMER_03704 [Parabacteroides merdae ATCC
43184]
Length = 349
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 124/361 (34%), Positives = 185/361 (51%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +RLM+V+ I + DL ++ D +
Sbjct: 1 MKLSKFKFNLPQELIALHPAKNRDESRLMIVNRKTG---EIEHKVFKDLLSYFGEKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGARIEVFLLRELNEDLRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP YI RP++ D
Sbjct: 114 EDDS---MVAEVIDNTTSRGRTLRFLYDGNHDEFKKALYALGETPLPKYI--DRPVEPDD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ +A +G+V AP AGLHF+ L+ RL + F+TLH G G F + VED
Sbjct: 169 EDRYQNIFATEEGAVVAPAAGLHFSRELMKRLEIKDCQFAFLTLHSGLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ++ +N+ K G +I +VGT+ +R +ETA + DG + + G+TN F
Sbjct: 229 KHKMDSEQMVVNGDVVNIVNTAKDNGRQICAVGTSVMRAIETAVSTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F +++NFH+P STLLM+ ++F G + Y A+ Y F +YGD L+
Sbjct: 289 IFPPYDFSVASSMITNFHMPLSTLLMMTASFGGYDLIMDAYDVALKEKYSFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|313203716|ref|YP_004042373.1| s-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
gi|312443032|gb|ADQ79388.1| S-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
Length = 349
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 125/361 (34%), Positives = 181/361 (50%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP IA P RD +RLMVVH I D+ + N ND +
Sbjct: 1 MKLSKFKFKLPDELIAQYPSKHRDESRLMVVHRKTG---EIEHRAFKDVLEYFNENDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + +I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGAQIEVFLLRELNHEMRLWDVLVEPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP R ++ D
Sbjct: 114 EDDS---IVAEVIDNTTSRGRTLRFLFDGTHDEFKKGLYSLGETPLPR--NITREVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V+AP AG+HF+ LL R+ GI +VT H+ G F + VED
Sbjct: 169 ADRFQTIFAKNEGAVSAPAAGMHFSRELLKRMEIKGIDSAYVTSHMSLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE + T + +N + I +VG T +R LET +G I P+ G+TN F
Sbjct: 229 KHKMDSEQMSVSVETVKKVNEAQLANRNICAVGVTVMRALETVVGTEGKIKPYDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLP STL+ML +AF + K Y+ A+ YRF YGD L+
Sbjct: 289 IFPPYDFTVANSMITNFHLPYSTLIMLTAAFGDYDLIMKAYEIAVKEEYRFGVYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|328947936|ref|YP_004365273.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
succinifaciens DSM 2489]
gi|328448260|gb|AEB13976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
succinifaciens DSM 2489]
Length = 346
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 129/358 (36%), Positives = 197/358 (55%), Gaps = 15/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP IA +P R + +LM + + + + + DL + +V
Sbjct: 1 MKTSDFNFDLPEELIAQKPSGIRGNDKLMFLDKSTG---KVFHYAMKDLVDLVEPGTLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNN+KV ++ G++ +E + SP N W+ + +K +K G++ F
Sbjct: 58 FNNSKVRRSRCYGIK----TDTGREQEFMFLNQTSPEGNIWNTMVKGAKKVKPGNVYKFP 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + D I F ++ + G IPLPPYI +R D D
Sbjct: 114 DGSEGKIVSDSKNDGTEFRFIEFPFRLTEV----WFEKNGHIPLPPYI--RREDDDTDSE 167
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS A PTAGLHFT +L +L + + ++TLHVG GTF+PV+ ++ ++H
Sbjct: 168 RYQTIYAKETGSAACPTAGLHFTEFVLEKLKEKNVDLEWITLHVGLGTFLPVRADNIEEH 227
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E + A+ +NS K G +++VGTTS+R LE+A+ E+GI++ + TNIF+
Sbjct: 228 KMHEEFYTVPYDVAEKINSAKKEGRPVLAVGTTSVRTLESASDENGIVHGGTRSTNIFMY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ VD + +NFH P+STL+MLVSAF G E Y+ A+ + YRF+SYGD L+
Sbjct: 288 PGYKFKVVDQMFTNFHTPESTLIMLVSAFAGRENILNAYKIAVENRYRFFSYGDAMLI 345
>gi|329114921|ref|ZP_08243677.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pomorum DM001]
gi|326695818|gb|EGE47503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pomorum DM001]
Length = 358
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 163/355 (45%), Positives = 224/355 (63%), Gaps = 14/355 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++FDF LP S IA P PR++ARL+ + + P + +D + DLP+ L D +V
Sbjct: 5 RTEDFDFHLPESLIAQEPARPREAARLL----DATQPGIFADRHIRDLPSLLKRGDLLVA 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT VI AQL+G+R E +I TL SW V R ++ +K GDI+ F
Sbjct: 61 NNTAVIRAQLHGLR------GEAKIGITLDQIQPDGSWHVLVRNARRLKVGDIIAFPGVQ 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+R+ A G +L FS G + + G + LPPYI R A+D DY
Sbjct: 115 DIARVLALE----PGGGAVLRFSAEGDAFDVFLQKAGALALPPYIHRPEGPTAQDTSDYA 170
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T + + +G+VAAPTAGLHFT LL + + G + +TLHVGAGTF+PV+ + +H MH
Sbjct: 171 TIFERNKGAVAAPTAGLHFTPALLKAVDATGAQRCTLTLHVGAGTFLPVREAEISEHKMH 230
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE G I TA+ +N+ + GGRI+++GTTSLRLLETAT E+GI++P+ G T+IFI PGY
Sbjct: 231 SERGIITPETAERINTTRKAGGRIIAIGTTSLRLLETATDENGIVHPFDGTTSIFIRPGY 290
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+FRAVD+L++NFHLP+STL MLVSAF G+E +++Y HA++ YRFYSYGD LL
Sbjct: 291 QFRAVDMLLTNFHLPRSTLFMLVSAFAGVERARQIYAHAVASGYRFYSYGDACLL 345
>gi|187922704|ref|YP_001894346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia phytofirmans PsJN]
gi|238689571|sp|B2SX83|QUEA_BURPP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187713898|gb|ACD15122.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia phytofirmans PsJN]
Length = 352
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 140/363 (38%), Positives = 198/363 (54%), Gaps = 22/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSC--PLVISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V P + D ++LP + D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLEVDNPAGAAGPARLIDRRFAELPECIAPGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + + R SK + G +
Sbjct: 64 FNDTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPQPGTTIRLAD- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L + I G +PLPPYI D+ D Y
Sbjct: 118 ----AFDVTVGERVEPFYTLHF----PDDCLTLIEQFGRLPLPPYIEHD--PDSTDETRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 168 QTVFAQNPGAVAAPTAGLHFDDALLARLDEKGVERATLTLHVGAGTFQPVRVENLAEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE + A + + ++RG R+++VGTTS+R LE A + + S T+IF
Sbjct: 228 HSEWYHLPQALADKIAATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAAASTETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FR VD L++NFHLPKSTLLMLVSAF G+E ++ Y+HAI YRF+SYGD LL
Sbjct: 288 ITPGYKFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRETYRHAIEQRYRFFSYGDAMLL 347
Query: 357 FQK 359
++
Sbjct: 348 TRR 350
>gi|316934200|ref|YP_004109182.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris DX-1]
gi|315601914|gb|ADU44449.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris DX-1]
Length = 360
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 190/361 (52%), Positives = 242/361 (67%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRPV PRD+AR++VV P + D +V DLPA L D +V
Sbjct: 1 MRTDLFDFDLPAGNIALRPVSPRDAARMLVVRPG----APLEDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLAGHRIGRGP--EPKIDATLIKRLDGARWQALVKPAKKLVPGDVVRFGHD 114
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K GEI L FS G L++ I+ +G PLPPYIA KRP D +D
Sbjct: 115 GRVCLLGHLDATVEAKGEAGEITLAFSFHGPVLDQAIAEIGATPLPPYIASKRPPDVQDV 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT++L + L + G+ ++ +TLHVGAGTF+PVK EDT +
Sbjct: 175 ADYQTMFAANEGAVAAPTAGLHFTADLEAALAARGVGLHRITLHVGAGTFLPVKAEDTAE 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G I TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I ++ T+IFI
Sbjct: 235 HKMHAEWGTISRATAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAAFADETSIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SLLF
Sbjct: 295 TPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASLLF 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|300114138|ref|YP_003760713.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus watsonii C-113]
gi|299540075|gb|ADJ28392.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus watsonii C-113]
Length = 344
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 197/360 (54%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LP IA P R +RL+ + + ++ D +LP L++ D +V
Sbjct: 1 MQLSDFTYNLPKQLIAQYPPKRRGGSRLLSLEGSSG---IVKDQQFIELPELLSTGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A++ GV+ +I + + + + + + G L
Sbjct: 58 FNNTKVIPAKIQGVKDS-----GGKIEVLIERFLDQHRALAHVWANNPPRAGQSLVMEQS 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ K G L F + L + + +G IPLPPYI R + D Y
Sbjct: 113 ------VEVEVRKRIKGLFELRF-LDPRPLPQLLEAIGQIPLPPYIQ--RKTTSVDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G++AAPTAGLHF LL RL + GI+ ++TLHVGAGTF PV+V++ H M
Sbjct: 164 QTVYASRPGAIAAPTAGLHFDKLLLKRLQAQGIQSGYITLHVGAGTFQPVRVKNITQHQM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + + GGRIV+VGTT++R LE A+ + GII P+ G T IFI PG
Sbjct: 224 HSEYVEVSEQICTQIRDTQQAGGRIVAVGTTTVRALEAASAK-GIIAPYQGETEIFIFPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR V+ L++NFHLP++TLLMLV AF G ++ Y+HA+ YRF+SYGD + + +
Sbjct: 283 YRFRTVNALITNFHLPETTLLMLVCAFAGSKQVLTAYRHAVKKGYRFFSYGDAMFITESK 342
>gi|212634512|ref|YP_002311037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
piezotolerans WP3]
gi|226736743|sp|B8CLC4|QUEA_SHEPW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|212555996|gb|ACJ28450.1| Queuosine biosynthesis protein [Shewanella piezotolerans WP3]
Length = 345
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 134/360 (37%), Positives = 195/360 (54%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D + + + D +V
Sbjct: 1 MRVADFSFELPDELIARYPTAERTASRLLSLDGNSGA---LADLQFTAILEKVQPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K +I+ +
Sbjct: 58 FNNTRVIPARLFGKKQS-----GGKLEILVERMLDDKRILAHVRCSKSPKVDNIICLDNG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + S + + VG +PLPPYI RP + D Y
Sbjct: 113 Y-------EMKMCARHDALFELELQSDKTILEVLEEVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L+ L G+K FVTLHVGAGTF PV+V++ DH M
Sbjct: 164 QTVYNQTPGAVAAPTAGLHFDDAMLAALKDKGVKTAFVTLHVGAGTFQPVRVDEILDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP-WSGFTNIFITP 299
HSE + + K+ G R+++VGTTS+R LE+A +SG T+IFI P
Sbjct: 224 HSEWAEVSQDVVDLIALTKANGHRVIAVGTTSVRSLESAARASAAELEAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKTAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|90416765|ref|ZP_01224695.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2207]
gi|90331518|gb|EAS46754.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2207]
Length = 348
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 195/356 (54%), Gaps = 20/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M F FDLP IA +P R +RL+ + S + +DL + + D +V
Sbjct: 1 MRRDLFQFDLPDELIARQPAEQRQGSRLLYLD---SASEDLRHQQFTDLLSHIEPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + +I + +S +S + R SK K G+ L F
Sbjct: 58 FNNTKVIAARLFGQKES-----GGKIEVLVERVLSTDSVLAHIRASKSPKPGNQLLF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ A ++ + + L + + +G +PLPPYI R D Y
Sbjct: 110 --ENGYSAEMLGRSDA----LFELRFSAPVLDVLDQIGHMPLPPYI--DRADTEEDQSRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF +L+ + + G K+ FVTLHVGAGTF PV+ ++ DH M
Sbjct: 162 QTVYADQLGAVAAPTAGLHFDDQMLADIKAKGAKIAFVTLHVGAGTFQPVRADNIHDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + K+ GGR+V+VGTTS+R LETA + G I P+ G TNIFI PG
Sbjct: 222 HTEWLQVSDEVCAQVRDTKAAGGRVVAVGTTSVRCLETAASS-GSIGPFEGDTNIFIFPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHL +STLLMLVSAF G + + Y A++ YRF+SYGD L
Sbjct: 281 YRFNVVDALLTNFHLSESTLLMLVSAFAGYKPIMQAYSEAVAERYRFFSYGDAMFL 336
>gi|163857959|ref|YP_001632257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
petrii DSM 12804]
gi|163261687|emb|CAP43989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
petrii]
Length = 353
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 193/359 (53%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P R +RL+ + + D DL L + D +VFN
Sbjct: 8 LSDFDYALPPELIAQTPAAQRGGSRLLHLDGAGAP----HDRRFPDLAGLLRAGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + P+ + R SK G L
Sbjct: 64 DTRVIKARLTGHKAS-----GGKVEVLVERITEPDRALAHVRASKSPGPGTTLRLADAFD 118
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L L + + G PLPPYI DA D YQT
Sbjct: 119 ATVL---------GRAGELFDLRFPAPVLDLLDAHGATPLPPYITHA--ADATDEARYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF +L RL ++G++ FVTLHVGAGTF PV+V++ DH+MH+
Sbjct: 168 VYAREPGAVAAPTAGLHFDEAMLERLAALGVERAFVTLHVGAGTFQPVRVDNLADHVMHA 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWSGFTNIFI 297
E + P A+ ++RGGR+++VGTTS+R LE+A ++ P G T +FI
Sbjct: 228 EWYTVGQPVIDAIARARTRGGRVIAVGTTSVRALESAAAQNPHGPQAPLAPLQGDTRLFI 287
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
TPGYR+R VD L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD +
Sbjct: 288 TPGYRYRVVDALVTNFHLPQSTLLMLVSALAGMEPIRRAYAHAVAQRYRFFSYGDAMFI 346
>gi|293607153|ref|ZP_06689495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter piechaudii ATCC 43553]
gi|292814487|gb|EFF73626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter piechaudii ATCC 43553]
Length = 352
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 196/361 (54%), Gaps = 27/361 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V +F++DLPP IA P R +RL+ + + D +DL L +D +VFN
Sbjct: 7 VSDFNYDLPPELIAQTPAATRTGSRLLHLD----AASQLHDRQFADLIGLLRPDDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + + + R SK G +L
Sbjct: 63 DTRVIKARLAGHKI-----TGGKVEVLVERITESDRVLAHVRASKSPGPGMVLRLAD--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
EATV+ + L + + G PLPPYI D+ D YQT
Sbjct: 115 --AFEATVLGREGE----LFDIRFPGPVLDLLDAHGATPLPPYITHA--ADSGDDDRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L RL +GI FVTLHVGAGTF PV+V++ DH+MH+
Sbjct: 167 VYAREPGAVAAPTAGLHFDQPTLDRLADLGIARAFVTLHVGAGTFQPVRVDNLADHVMHA 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-------DGIINPWSGFTNI 295
E + T A+ + +++GGR+++VGTTS+R LE+A + + G T +
Sbjct: 227 EWFTVPQATVDAIAATRAKGGRVIAVGTTSVRALESAAAQTEGRTADGLPLAAAQGDTRL 286
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYR+R VD L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD
Sbjct: 287 FITPGYRYRVVDALVTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAQRYRFFSYGDAMF 346
Query: 356 L 356
+
Sbjct: 347 I 347
>gi|146329296|ref|YP_001208964.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Dichelobacter nodosus VCS1703A]
gi|166216719|sp|A5EWY6|QUEA_DICNV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146232766|gb|ABQ13744.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Dichelobacter nodosus VCS1703A]
Length = 354
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 132/356 (37%), Positives = 202/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F ++LP IA P+ R +RL+V + + IS+ + D FL D +V
Sbjct: 5 LKKSDFFYELPEHLIARYPLQNRSDSRLLVAAVESAQKVHISNKQMIDFIDFLKPEDLLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A++ G + ++ + +S + R SK G + +Q
Sbjct: 65 INNTRVVPARMFGHKIS-----GGKVEVFIERLLSEQRVKAHIRASKAPLLGSQIVIGAQ 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I+ G + S + + ++ G +P+PPY+ R +A D Y
Sbjct: 120 K-------VTIEDKKDGIYTVF---SEMPWTKLMAQQGKMPIPPYL--ARDAEALDSERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+I G+VAAPTAGLHF LL R+ + G+K +TLHVGAGTF PV+VE+ ++H+M
Sbjct: 168 QTVYAQIAGAVAAPTAGLHFDQKLLERIAAKGVKRAAITLHVGAGTFQPVRVENLNEHVM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + +++ GR++++GTT+LR LE+A G + + G T++FITPG
Sbjct: 228 HQEWFSLSQEVVDAVAACRAQNGRVIAIGTTALRALESAAIGSGKVGVFQGDTDLFITPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L +NFHLP+STLLMLVSAF G+ +++YQHAI+ YRF+SYGD L
Sbjct: 288 YEFQVVDALFTNFHLPESTLLMLVSAFAGVNNIRRIYQHAITEQYRFFSYGDAMFL 343
>gi|46576964|sp|Q7WMM7|QUEA_BORBR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 347
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 196/356 (55%), Gaps = 22/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P R +RL+ + + D DL L +D +VFN
Sbjct: 7 LADFDYHLPPELIAQSPAAERGGSRLLHLD----AASRLHDRRFPDLAGLLRPHDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + +P+ V+ R SK G L
Sbjct: 63 DTRVIKARLTGQKA-----TGGKVEVLVERITAPDRALVHVRASKSPGPGMRLRLAE--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
EA V+ + L + + G PLPPYI DA D YQT
Sbjct: 115 --AFEAEVLGREGE----LFDLRFPAPVLDLLDAHGATPLPPYITHA--ADATDERRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HIMH+
Sbjct: 167 VYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHIMHA 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFITPG 300
E + T A+ ++ GGRIV+VGTTS+R LE+A + DG + G T +FITPG
Sbjct: 227 EWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFITPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD +
Sbjct: 287 YRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDAMFI 342
>gi|296327943|ref|ZP_06870478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
gi|296154899|gb|EFG95681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
Length = 343
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 130/355 (36%), Positives = 198/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM++ + ++ +L D +V N
Sbjct: 5 LSDYDYFLPEELIGQKPREPRDSAKLMLIDRKNGS---VEHKNFYNIIDYLQKGDVLVRN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R++ ++W +P+K +K G L+
Sbjct: 62 ATKVIPARIFGHKD-----TGGVLEILLIKRITLDTWECLLKPAKKLKLGQKLYIGENK- 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK + YQT
Sbjct: 116 --ELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRK----LENKDRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL++++ G+++ + L VG GTF PV+ + +H MH
Sbjct: 169 VYAQRGESVAAPTAGLHFTEELLNKILDKGVEIVDIFLEVGLGTFRPVQTVNVLEHKMHE 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 229 ESFEISEKVAKIINEAKAEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYK 288
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 289 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 343
>gi|56476202|ref|YP_157791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aromatoleum
aromaticum EbN1]
gi|56312245|emb|CAI06890.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, first step
of queuosine biosynthesis [Aromatoleum aromaticum EbN1]
Length = 354
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 197/357 (55%), Gaps = 20/357 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P+ R ++RL+V+ + D DLP + D +VFN
Sbjct: 14 LDDFDYLLPPELIAQAPLAERCASRLLVLDGER-----LDDRGFCDLPELVQPGDLLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + I + + P+ R SK + G L
Sbjct: 69 DTRVIHARLYGTKE-----TGGHIEVLIERAIGPHEALAQVRASKSPRAGSRLRLADAFD 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L GE + ++ + G +PLPPYI R D D YQT
Sbjct: 124 VTVL-------GRVGEFFHLRFPDSHDVLDLLEHHGKLPLPPYI--DRSADEHDESRYQT 174
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ +GSVAAPTAGLHF +L+ L G+ ++TLHVGAGTF PV+V D +H MH
Sbjct: 175 VYARERGSVAAPTAGLHFDQPMLAELAKKGVHGAWLTLHVGAGTFQPVRVNDLGEHRMHR 234
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T A+ + ++ G R+++VGTTSLR LE A +DG + +G T +FI PGYR
Sbjct: 235 ERYVIPQETVAAIAATRAAGRRVIAVGTTSLRALEGAA-QDGPLEAGTGETELFILPGYR 293
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ VD L++NFHLPKSTLLMLVSAF G+E ++ Y HA+ H+YRF+SYGD + +
Sbjct: 294 FQVVDALITNFHLPKSTLLMLVSAFAGLEPMRRAYTHAVGHSYRFFSYGDAMFITHR 350
>gi|46576961|sp|Q7WB60|QUEA_BORPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 347
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 195/356 (54%), Gaps = 22/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P R +RL+ + + D DL L +D +VFN
Sbjct: 7 LADFDYHLPPELIAQSPAAERGGSRLLHLD----AASRLHDRRFPDLAGLLRPHDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + +P+ + R SK G L
Sbjct: 63 DTRVIKARLTGQKA-----TGGKVEVLVERITAPDRALAHVRASKSPGPGMRLRLAE--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
EA V+ + L + + G PLPPYI DA D YQT
Sbjct: 115 --AFEAEVLGREGE----LFDLRFPAPVLDLLDAHGATPLPPYITHA--ADATDERRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HIMH+
Sbjct: 167 VYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHIMHA 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFITPG 300
E + T A+ ++ GGRIV+VGTTS+R LE+A + DG + G T +FITPG
Sbjct: 227 EWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFITPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD +
Sbjct: 287 YRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDAMFI 342
>gi|225419694|ref|ZP_03761997.1| hypothetical protein CLOSTASPAR_06032 [Clostridium asparagiforme
DSM 15981]
gi|225041658|gb|EEG51904.1| hypothetical protein CLOSTASPAR_06032 [Clostridium asparagiforme
DSM 15981]
Length = 318
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 136/318 (42%), Positives = 186/318 (58%), Gaps = 13/318 (4%)
Query: 41 ISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS 100
++ + D+ +L D +V N+TKVI A+L GV+ +I L R + W
Sbjct: 2 VTHRVFRDIVEYLRPGDCLVINDTKVIPARLMGVK----ADTGAKIEVLLLKRRENDIWE 57
Query: 101 VYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
+P K K G L F G L TV++ + G L+ F GI E + +G +
Sbjct: 58 TLVKPGKKAKPGTELSF----GDGLLTGTVVETVDDGNRLIQFHYEGI-FEEILDQLGQM 112
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPYI + YQT YAK +GS AAPTAGLHFT+ LL + +G+K+ VTL
Sbjct: 113 PLPPYITHQLKD----KNRYQTVYAKHEGSAAAPTAGLHFTNELLKEIGDMGVKIAHVTL 168
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVG GTF PVKVE+ DH MHSE ++ A +N K+ GGR++ VGTTS R +E+A+
Sbjct: 169 HVGLGTFRPVKVENVLDHHMHSEFYVVEESEAAKVNETKAAGGRVICVGTTSCRTVESAS 228
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
TEDG++ +G+T IFI PGYRF+ +D L++NFHLP+STL+MLVSA G E Y+ A
Sbjct: 229 TEDGVLKAGTGWTEIFIYPGYRFKILDALITNFHLPESTLVMLVSALAGREHILAAYEEA 288
Query: 341 ISHAYRFYSYGDTSLLFQ 358
I YRF+S+GD +
Sbjct: 289 IRERYRFFSFGDAMFIAP 306
>gi|91207413|sp|Q5P721|QUEA_AZOSE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 345
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 197/357 (55%), Gaps = 20/357 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P+ R ++RL+V+ + D DLP + D +VFN
Sbjct: 5 LDDFDYLLPPELIAQAPLAERCASRLLVLDGER-----LDDRGFCDLPELVQPGDLLVFN 59
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + I + + P+ R SK + G L
Sbjct: 60 DTRVIHARLYGTKE-----TGGHIEVLIERAIGPHEALAQVRASKSPRAGSRLRLADAFD 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L GE + ++ + G +PLPPYI R D D YQT
Sbjct: 115 VTVL-------GRVGEFFHLRFPDSHDVLDLLEHHGKLPLPPYI--DRSADEHDESRYQT 165
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ +GSVAAPTAGLHF +L+ L G+ ++TLHVGAGTF PV+V D +H MH
Sbjct: 166 VYARERGSVAAPTAGLHFDQPMLAELAKKGVHGAWLTLHVGAGTFQPVRVNDLGEHRMHR 225
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T A+ + ++ G R+++VGTTSLR LE A +DG + +G T +FI PGYR
Sbjct: 226 ERYVIPQETVAAIAATRAAGRRVIAVGTTSLRALEGAA-QDGPLEAGTGETELFILPGYR 284
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ VD L++NFHLPKSTLLMLVSAF G+E ++ Y HA+ H+YRF+SYGD + +
Sbjct: 285 FQVVDALITNFHLPKSTLLMLVSAFAGLEPMRRAYTHAVGHSYRFFSYGDAMFITHR 341
>gi|218295523|ref|ZP_03496336.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermus
aquaticus Y51MC23]
gi|218244155|gb|EED10681.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermus
aquaticus Y51MC23]
Length = 345
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 142/355 (40%), Positives = 193/355 (54%), Gaps = 13/355 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LPP RIA V PRD AR+MVV+ P ++ V DLP FL D +VFN
Sbjct: 4 LEAYDYHLPPERIAQEGVEPRDLARMMVVYRE--GPFRVAHRRVRDLPEFLRPGDLLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+KVI A+L + + L +P W P++ G L F S
Sbjct: 62 ESKVIPARLLARK-----PTGGRVEVLLVQERAPGLWEALLGPARRAPVGTELFFLSPRD 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + + +L + VG +PLPPYI + YQT
Sbjct: 117 WRPVPGLKAEVVGVEADGVRLLQIQGDLLAHLEEVGEVPLPPYIKAQ-----IPLERYQT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GSVAAPTAGLHFT L+ RL +G++++F+TLHVG GTF PVK D + H MH+
Sbjct: 172 VYAKRPGSVAAPTAGLHFTPELMERLRGMGVELHFLTLHVGPGTFRPVKG-DPEKHAMHA 230
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I TA A+N K+ G R+++VGTT +R LE+A E + +G T +FI P Y
Sbjct: 231 EPYEIPEATALAVNRAKAEGRRVIAVGTTVVRALESAYREGEGVAAGAGETRLFIRPPYA 290
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ +D L +NFHLP+STLLMLV+AF G E T + Y+ A+ YRFYS GD L+
Sbjct: 291 FKVIDGLFTNFHLPRSTLLMLVAAFLGYERTMEAYRLAVEEGYRFYSLGDAMLIL 345
>gi|319796412|ref|YP_004158052.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus EPS]
gi|315598875|gb|ADU39941.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus EPS]
Length = 347
Score = 368 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 195/363 (53%), Gaps = 20/363 (5%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M + +FDFDLPP +A P R S+RL+ D + DLP+ L D
Sbjct: 1 MRAFTLSDFDFDLPPELVAQHPASERTSSRLL-----DGTGDAPVDRIFKDLPSLLREGD 55
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+VFN+T+V+ A+L G + ++ + + + + SK G L
Sbjct: 56 LLVFNDTRVVKARLFGEK-----PTGGKLELLVERVLQGQEVVAHMKVSKKPPVGTTLEM 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
++ L ++ S +G + G +PLPPYI +D
Sbjct: 111 VGG-FRATLLGRWPEEDGALFRFAFESDAGENPYMLMERCGHVPLPPYITHTDSVDD--E 167
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A++ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF PVK E+ +
Sbjct: 168 SRYQTVFARVPGAVAAPTAALHFDEGLLAALEARGVQRANVTLHVGAGTFQPVKTENIAE 227
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E + T +A+ K+RGGR+++VGTT++R LE+ +G T IFI
Sbjct: 228 HTMHAERYEVPEATRRAIAECKARGGRVIAVGTTTVRTLESWAKSG----EATGDTRIFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+ F VD+L++NFHLPKSTL+MLVSAF G E +Y +AI+H YRF+SYGD LL
Sbjct: 284 TPGFAFAHVDVLVTNFHLPKSTLMMLVSAFAGYERVMALYANAIAHQYRFFSYGDAMLLA 343
Query: 358 QKR 360
+ +
Sbjct: 344 RTQ 346
>gi|284036095|ref|YP_003386025.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Spirosoma
linguale DSM 74]
gi|283815388|gb|ADB37226.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Spirosoma
linguale DSM 74]
Length = 347
Score = 368 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 136/361 (37%), Positives = 191/361 (52%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP S IA PV R +RLMVV I SD+ ++ D +V
Sbjct: 1 MKLSEFKFDLPESLIAKYPVE-RGESRLMVVDRK---AKTIEHKQFSDMLSYFGDGDVMV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L ++ W V P++ I+ G+ L+F
Sbjct: 57 INNTKVFPARLYGNK----EKTGAKIEVFLLRELNREMKLWDVLVDPARKIRVGNKLYF- 111
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L A VID + I +F + E + + +G P+P R + D
Sbjct: 112 ---GDSDLVAEVIDNTTSRGRTIRFLFDGNHEEFMKAVDELGETPIPR--EMNREAEDAD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ G+VAAPTAGLHFT ++ R+ GI VTLHVG GTF V VED
Sbjct: 167 RDAYQTVFAQHVGAVAAPTAGLHFTRAMMKRMEIKGINFAPVTLHVGLGTFRQVDVEDLT 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE I +AQ +N G R+ +VGTTSL+ +E++ + + + P G+T+ F
Sbjct: 227 KHKTDSENYRIPEDSAQIVNKALDAGKRVCAVGTTSLKAIESSVSANSRLKPVEGWTDRF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + L+++ HLP+S L+M+ SAF G E K+ YQ AI YRF+SYGD L+
Sbjct: 287 IFPPYDFKIANSLLTSLHLPESILIMMTSAFGGHELIKEAYQVAIKEKYRFFSYGDAMLI 346
Query: 357 F 357
Sbjct: 347 I 347
>gi|311108310|ref|YP_003981163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter xylosoxidans A8]
gi|310762999|gb|ADP18448.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter xylosoxidans A8]
Length = 352
Score = 368 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 199/361 (55%), Gaps = 27/361 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V +F+++LPP IA P R +RL+ + + D +DL A L D ++FN
Sbjct: 7 VADFNYELPPELIAQAPAAERTGSRLLHLDG----AGQLHDRQFADLAALLRPQDLLIFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+LNG + +I + P+ + R SK G +L
Sbjct: 63 DTRVIKARLNGHKI-----TGGKIEVLVERITEPDRVLAHVRASKSPGPGMVLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L E L + + G PLPPYI + D D YQT
Sbjct: 118 ATVL---------GREGELFDIRFPGPVLDLLDAHGATPLPPYITHE--ADTGDDERYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF L RL ++G++ FVTLHVGAGTF PV+V++ DH+MH+
Sbjct: 167 VYAREPGAVAAPTAGLHFDQPTLDRLAAMGVERAFVTLHVGAGTFQPVRVDNLADHVMHA 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPW------SGFTNI 295
E + T A+ + +SRGGR+++VGTTS+R LE+A + +G P G T +
Sbjct: 227 EWFTVPQATVDAIAAARSRGGRVIAVGTTSVRALESAAAQTEGRTAPGLPLAAAQGDTRL 286
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYR+R +D L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD
Sbjct: 287 FITPGYRYRVIDALVTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAERYRFFSYGDAMF 346
Query: 356 L 356
+
Sbjct: 347 I 347
>gi|330429272|gb|AEC20606.1| tRNA ribosyltransferase-isomerase [Pusillimonas sp. T7-7]
Length = 346
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 132/354 (37%), Positives = 187/354 (52%), Gaps = 20/354 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD++LP IA P R +RL+ + + D +DLP L ND +VFN
Sbjct: 7 LSQFDYELPQELIAQSPAARRTGSRLLHLDSQAG----LHDRQFADLPQLLRPNDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+VI A+L G + ++ + + + + SK K G L
Sbjct: 63 NTRVIKARLRGQKES-----GGKVEVLIERISGTRTALAHVKASKSPKPGSKLLLAD--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
T I + + L + + G PLPPYI + YQT
Sbjct: 115 ------TFIVTVSGRQGELFELEFPERVLDLLDRHGATPLPPYIEHAAEQEDD--ERYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF +L++L ++GI FVTLHVGAGTF PV+ + DHIMH+
Sbjct: 167 VYATEPGAVAAPTAGLHFDQAMLAQLAAMGIAQAFVTLHVGAGTFQPVRTQKLGDHIMHA 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + T + + + ++ GGR+V++GTTS+R LE+A G T +FITPGYR
Sbjct: 227 ERYSVPPETVELVKTTRAAGGRVVAIGTTSVRALESAAPHAHQNGVIEGDTQLFITPGYR 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ VD L++NFHLP+STLLMLVSA G+E ++ Y HA+ YRF+SYGD +
Sbjct: 287 YNWVDALLTNFHLPQSTLLMLVSALAGMEPIRRAYAHAVQSRYRFFSYGDAMFI 340
>gi|118595266|ref|ZP_01552613.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophilales bacterium HTCC2181]
gi|118441044|gb|EAV47671.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophilales bacterium HTCC2181]
Length = 348
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 196/359 (54%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EF++ LP IA P+ R +RL+V +P ISD + L ND ++
Sbjct: 1 MRIEEFNYILPDELIAQSPLKNRGDSRLLVANP---VGKKISDSYFKNFTVLLKKNDLVI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A++ G + ++ + ++ ++ + R SK I G +
Sbjct: 58 FNDTRVIKARIFGTK-----TTGGKVELLIERILNNHTATALIRTSKRIDIGLTIAIDC- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + L + G + G +PLPPYI R + D + Y
Sbjct: 112 -------INSIKVISRNNNLFEIQLLGGSFYDLLEKHGHVPLPPYIE--RNDEDEDEIRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK G+VAAPTAGLHF+ L + GI + F+TLHVG+GTF P+K ED + H M
Sbjct: 163 QTVFAKEAGAVAAPTAGLHFSEQDLRGMDKKGIAMAFITLHVGSGTFQPIKTEDINQHTM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H EI I + + K++ GRIV++GTT LR LE+A ED II T+IFI PG
Sbjct: 223 HQEIYNIPKSIIKKIAETKAKNGRIVAIGTTVLRALESAYEED-IIKTGYNETDIFIKPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ F+ VD L +NFHLPKSTLLMLVSAF G + K +Y+HA+ + YRF+SYGD + QK
Sbjct: 282 FNFKVVDALFTNFHLPKSTLLMLVSAFAGSKFIKAIYRHAVDNKYRFFSYGDAMFIEQK 340
>gi|33600349|ref|NP_887909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
bronchiseptica RB50]
gi|33567948|emb|CAE31861.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
bronchiseptica RB50]
Length = 357
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 196/356 (55%), Gaps = 22/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P R +RL+ + + D DL L +D +VFN
Sbjct: 17 LADFDYHLPPELIAQSPAAERGGSRLLHLD----AASRLHDRRFPDLAGLLRPHDLLVFN 72
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + +P+ V+ R SK G L
Sbjct: 73 DTRVIKARLTGQKA-----TGGKVEVLVERITAPDRALVHVRASKSPGPGMRLRLAE--- 124
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
EA V+ + L + + G PLPPYI DA D YQT
Sbjct: 125 --AFEAEVLGREGE----LFDLRFPAPVLDLLDAHGATPLPPYITHA--ADATDERRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HIMH+
Sbjct: 177 VYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHIMHA 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFITPG 300
E + T A+ ++ GGRIV+VGTTS+R LE+A + DG + G T +FITPG
Sbjct: 237 EWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFITPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD +
Sbjct: 297 YRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDAMFI 352
>gi|33595821|ref|NP_883464.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
parapertussis 12822]
gi|33565900|emb|CAE36448.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
parapertussis]
Length = 357
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 195/356 (54%), Gaps = 22/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P R +RL+ + + D DL L +D +VFN
Sbjct: 17 LADFDYHLPPELIAQSPAAERGGSRLLHLD----AASRLHDRRFPDLAGLLRPHDLLVFN 72
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + +P+ + R SK G L
Sbjct: 73 DTRVIKARLTGQKA-----TGGKVEVLVERITAPDRALAHVRASKSPGPGMRLRLAE--- 124
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
EA V+ + L + + G PLPPYI DA D YQT
Sbjct: 125 --AFEAEVLGREGE----LFDLRFPAPVLDLLDAHGATPLPPYITHA--ADATDERRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HIMH+
Sbjct: 177 VYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHIMHA 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFITPG 300
E + T A+ ++ GGRIV+VGTTS+R LE+A + DG + G T +FITPG
Sbjct: 237 EWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFITPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD +
Sbjct: 297 YRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDAMFI 352
>gi|74318092|ref|YP_315832.1| queuosine biosynthesis protein [Thiobacillus denitrificans ATCC
25259]
gi|91207332|sp|Q3SH62|QUEA_THIDA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|74057587|gb|AAZ98027.1| queuosine biosynthesis protein [Thiobacillus denitrificans ATCC
25259]
Length = 344
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 195/358 (54%), Gaps = 21/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LPP IA P R ++RL+ V + + D + +LP L ++D +V
Sbjct: 1 MRVADFDFELPPDLIAQFPPDVRGASRLLHV----TAAGALHDRMFRELPTLLGADDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + + + R S K G +
Sbjct: 57 MNDTRVIKARLFGEKDS-----GGRVELLVERVTGEFEALAFIRASHAPKPGARIRLADD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A + L F +++ G +PLPPYI + Y
Sbjct: 112 ------VALDVLDKQHDLTRLHFPAPVLDVL---DRCGRLPLPPYIEHAPTEED--EARY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF + +L L + G++ VTLHVGAGTF PV+V + DH+M
Sbjct: 161 QTVYANEPGAVAAPTAGLHFDAAMLGTLQTQGVRTARVTLHVGAGTFQPVRVAEVADHVM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T A+ ++RGGR+V+VGTTSLR LE A+ G + G T IFITPG
Sbjct: 221 HSERYTVPAATVAAIAETRARGGRVVAVGTTSLRALEAASAS-GSVEAGVGETAIFITPG 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR VD L++NFHLP+STLLMLVSAF GIE ++ Y HAI+ YRF+SYGD L +
Sbjct: 280 YRFRTVDALVTNFHLPRSTLLMLVSAFSGIETIRRAYAHAIAERYRFFSYGDAMFLEK 337
>gi|268316657|ref|YP_003290376.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Rhodothermus marinus DSM 4252]
gi|262334191|gb|ACY47988.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Rhodothermus marinus DSM 4252]
Length = 348
Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats.
Identities = 135/362 (37%), Positives = 193/362 (53%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + + +D P S +A P PRDSARLMV+ I + D+ + N D +V
Sbjct: 1 MRLSDLHYDYPKSLVAKYPAEPRDSARLMVLDRKRRT---IEHRIFRDIVDYFNEGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L + W P++ I+ G+ ++F
Sbjct: 58 VNNTKVFPARLYGRK----EKTGAKIEVLLLRELNAESRLWDALVDPARKIRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
L A VID + I +F S EL ++I VG +PLPPYI R + D
Sbjct: 113 ----DGGLVAEVIDNTTSRGRTIRFLFDGSDEELYQKIEEVGHMPLPPYIK--REDEPED 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ GSVAAPTAGLHFT L+ RL G+ + +TLHVG GTF P++VED
Sbjct: 167 RERYQTIFAQETGSVAAPTAGLHFTPELVERLKQKGVDIVPITLHVGLGTFRPIEVEDLT 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSR-GGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H M SE I A+ +N + +VGTT +R LE++ + G + P G+T+
Sbjct: 227 KHRMDSEYFTITEEAAERINRALLSPEHTVTAVGTTVVRALESSISATGTVKPGFGWTDK 286
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y F+ V+ L++NFH+P+STLL LV AF G + + Y+ A+ YR +S+GD L
Sbjct: 287 FIYPPYDFKIVERLITNFHMPRSTLLALVVAFAGYDFVMEAYRTAVQEKYRLFSFGDAML 346
Query: 356 LF 357
+
Sbjct: 347 IL 348
>gi|19704665|ref|NP_604227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|22096012|sp|Q8R620|QUEA_FUSNN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|19714973|gb|AAL95526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 351
Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats.
Identities = 130/355 (36%), Positives = 198/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM++ + ++ +L D +V N
Sbjct: 13 LSDYDYFLPEELIGQKPREPRDSAKLMLIDRKNGS---VEHKNFYNIIDYLQKGDILVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R++ ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIFGHKD-----TGGVLEILLIKRITLDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK + YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRK----LENKDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL++++ G+++ + L VG GTF PV+ + +H MH
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLNKILDKGVEIVDIFLEVGLGTFRPVQTVNVLEHKMHE 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 237 ESFEISEKVAKIINEAKAEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYK 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 297 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 351
>gi|153004186|ref|YP_001378511.1| queuosine biosynthesis protein [Anaeromyxobacter sp. Fw109-5]
gi|166216697|sp|A7H9Y1|QUEA_ANADF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152027759|gb|ABS25527.1| Queuosine biosynthesis protein [Anaeromyxobacter sp. Fw109-5]
Length = 345
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 200/361 (55%), Gaps = 21/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD++LP +A PV PRD++RL+V+ + +DLP L D +V
Sbjct: 1 MRLSDFDYELPEELVAQEPVTPRDASRLLVLPREGAA----EHRAFTDLPDLLAPGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDILHF 117
FN+TKVI A+L G + ++ L + W + SK I++G L F
Sbjct: 57 FNDTKVIPARLVGTK-----PTGGKVELLLCEPLGGGLGSRWRAMGQASKPIREGTTLLF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V G ++ G LE ++ G IPLPPYI +R D
Sbjct: 112 EG------LEARVEASEGEGFYVVTLDREGEALEAALARAGRIPLPPYI--RRAPSDVDR 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A+ GS AAPTAGLHFT +L+RL + G++ VTLHVG GTF+PV+ + +
Sbjct: 164 ERYQTIWARAPGSAAAPTAGLHFTEAILARLAARGVERTAVTLHVGPGTFLPVRGDSVEG 223
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E + A A+ + ++RG R+V+VGTTS+R LE+A + T +F+
Sbjct: 224 HRMHAEQYEVRPEAAAAIAACRARGSRVVAVGTTSVRTLESAWRGGAVAAGAGR-TALFV 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ FRAVD L++NFHLP+STLLMLV AF G Y+ A++ YRF+SYGD LL
Sbjct: 283 RPGHAFRAVDALVTNFHLPRSTLLMLVCAFGGTHRVLAAYRDAVARRYRFFSYGDAMLLA 342
Query: 358 Q 358
+
Sbjct: 343 R 343
>gi|52425613|ref|YP_088750.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mannheimia
succiniciproducens MBEL55E]
gi|81609463|sp|Q65S95|QUEA_MANSM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52307665|gb|AAU38165.1| QueA protein [Mannheimia succiniciproducens MBEL55E]
Length = 363
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 200/365 (54%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P R S+ + IS H SD+ +N D ++
Sbjct: 1 MHLSDFYFDLPDELIARYPKPERSSS---RLLRLSGENGDISHHTFSDVYDLINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + ++ + + + R SK K G L
Sbjct: 58 FNNTRVIPARMYGRKAS-----GGKIEVLIERVLTESRFLAHVRSSKAPKAGTELILGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ + V+ L + L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGKGVKAVMIGRQDALFELEITEKSTALLDILQKIGHMPLPPYI--DRPDEDADQER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+KI G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+V + ++H
Sbjct: 171 YQTVYSKIPGAVAAPTAGLHFDEELLAKLKAKGVNFAFVTLHVGAGTFQPVRVNNIEEHH 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGI---INPWSGFT 293
MH+E + A+ + K+ G R+++VGTTS+R +E+A E G I P+ T
Sbjct: 231 MHAEYVEVPQQVVDAIVATKAAGKRVIAVGTTSVRSVESAALAAQEKGFAQIIEPFFADT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKQFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFITK 355
>gi|91781856|ref|YP_557062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia xenovorans LB400]
gi|123063204|sp|Q145H9|QUEA_BURXL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91685810|gb|ABE29010.1| Queuosine biosynthesis protein [Burkholderia xenovorans LB400]
Length = 352
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 200/363 (55%), Gaps = 22/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSC--PLVISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V P + D ++LP + + D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLEVDNPAGATGPARLIDRRFAELPDCIAAGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + + R SK + G +
Sbjct: 64 FNDTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPQPGTTIRLAD- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L + I G +PLPPYI DA D Y
Sbjct: 118 ----AFDVTVGERVEPFYTLHF----PADCLTLIEQFGRLPLPPYIEHD--PDATDETRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 168 QTVFAQNPGAVAAPTAGLHFDEALLARLDAAGVERATLTLHVGAGTFQPVRVENLAEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE + A + + ++RG R+++VGTTS+R LE A + + S T+IF
Sbjct: 228 HSEWYHLPQSLADKIAATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAAASTETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E ++ Y+HAI YRF+SYGD LL
Sbjct: 288 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIREAYRHAIEARYRFFSYGDAMLL 347
Query: 357 FQK 359
++
Sbjct: 348 TRR 350
>gi|110639429|ref|YP_679638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
gi|123058555|sp|Q11QL8|QUEA_CYTH3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110282110|gb|ABG60296.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
Length = 348
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 128/361 (35%), Positives = 195/361 (54%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF F LP +A P RD A++MV++ I + D+ + + D +V
Sbjct: 1 MKLSEFKFALPAELVAQHPAANRDEAKMMVINRATGT---IEHKIFKDIINYFDEGDIMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 MNNTKVFPARLYGNK----EKTGAKIEVFLLRELNAELHLWDVLVDPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+S L A V+D + I +F + + + I +G PLP YI RPI+ D
Sbjct: 113 ---GESDLVAEVVDNTTSRGRTIRFLFDGNSEDFSKIIETIGETPLPRYIK--RPIEEAD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ +G+VAAPTAGLHFT ++ R+ G+ +TLHVG G+F V VED
Sbjct: 168 KDRYQTIFAENKGAVAAPTAGLHFTKQVMKRMEIKGVNFAPLTLHVGLGSFRTVDVEDLT 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I++ TA +N R+ ++GTTS+R LE++ + + + +G+T+ F
Sbjct: 228 KHKMDSENFIIESTTADVVNKALDNKKRVCAIGTTSMRALESSVSANNRLKQNAGWTDRF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + +++NFH+P+STL M+ AF G E K Y+ AI Y F SYGD L+
Sbjct: 288 IFPPYDFKIANCMLTNFHMPESTLYMMACAFGGYELMTKAYKTAIKEKYNFLSYGDVMLI 347
Query: 357 F 357
Sbjct: 348 I 348
>gi|241767174|ref|ZP_04764931.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
delafieldii 2AN]
gi|241362214|gb|EER58268.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
delafieldii 2AN]
Length = 406
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 143/377 (37%), Positives = 205/377 (54%), Gaps = 29/377 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP+ IA P R ++RL+ L +D + +LP L + D +VFN
Sbjct: 38 LSDFDFALPPALIAQHPASERSASRLL-----DGRQLPPTDRIFRELPGLLRAGDLLVFN 92
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV----------YARPSKVIKKG 112
+T+V+ A++ G + E I L N+ + + SK G
Sbjct: 93 DTRVVKARIFGEKASGGK-LELLIERVLPAEARENAAGTAGGTGNEVVAHMKVSKKPLPG 151
Query: 113 DILHFFSQDGQSRLEATVIDKWN-TGEILLVFSISG---IELERQISLVGTIPLPPYIAR 168
+H +AT++ +W L F++ G + G +PLPPYI R
Sbjct: 152 STVHMAGGRHAGGFDATLLSRWPTEDGPLFRFALHGPAGESPWELMERHGHLPLPPYIER 211
Query: 169 KRP-----IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
++ A D YQT +A+ G+VAAPTA LHF ++L+ + + GI+ VTLHVG
Sbjct: 212 QQHTGNDPDAAEDSQRYQTVFARAPGAVAAPTAALHFDESVLAEMAARGIERASVTLHVG 271
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
AGTF PVK E+ +H MHSE + T AL + RGGR+V+VGTT++R LE+
Sbjct: 272 AGTFQPVKTENLAEHQMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWARSG 331
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
SG T IFITPG+ F+ VD+L++NFHLPKSTL+MLVSAF G E +Y+HAI+
Sbjct: 332 ----QASGDTAIFITPGFAFQVVDVLLTNFHLPKSTLMMLVSAFAGYEHVMALYRHAIAQ 387
Query: 344 AYRFYSYGDTSLLFQKR 360
YRF+SYGD LL +++
Sbjct: 388 EYRFFSYGDAMLLERRK 404
>gi|56697089|ref|YP_167452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
pomeroyi DSS-3]
gi|81558479|sp|Q5LRA3|QUEA_SILPO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56678826|gb|AAV95492.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
pomeroyi DSS-3]
Length = 349
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 158/346 (45%), Positives = 213/346 (61%), Gaps = 14/346 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNG- 73
IA RP PR SARL+V + ISD +V DLP +L D +V N+T+VI A+L+G
Sbjct: 15 IATRPAQPRSSARLLVARGD-----AISDAVVRDLPDWLRPGDRLVLNDTRVIPARLSGT 69
Query: 74 -VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVID 132
R I TL + SWS A+P + +++G+ + F + ++
Sbjct: 70 RQRQSAQGPVTARIEITLLEPRADGSWSALAKPLRKLREGETIIFSNDLSAD------VE 123
Query: 133 KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVA 192
G+ LL F+++G + + ++ G +PLPPYIA KR D +D DYQT +A+ G+VA
Sbjct: 124 AIEDGQALLRFNLTGPDFDAALAQAGAMPLPPYIAAKRAADEQDKTDYQTVWARHSGAVA 183
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTA LHF LL+ L + G+ VTLHVGAGTF+PVKVED H MH+E G + A A
Sbjct: 184 APTASLHFDDTLLAALAAHGVTFTHVTLHVGAGTFLPVKVEDVTTHKMHAEWGRVSAEAA 243
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+ + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG+ FR D LM+N
Sbjct: 244 AEIAATKAAGGRVIPVGTTALRLIESAAR-GGQIAPWEGDTDIFIYPGFDFRVADGLMTN 302
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FHLPKSTLLMLVSA G E +K+Y HA+ + YRF+SYGD SLL
Sbjct: 303 FHLPKSTLLMLVSALMGQESIRKIYAHAVENRYRFFSYGDASLLLP 348
>gi|296161046|ref|ZP_06843857.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. Ch1-1]
gi|295888745|gb|EFG68552.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. Ch1-1]
Length = 352
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 141/363 (38%), Positives = 200/363 (55%), Gaps = 22/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSC--PLVISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V P + D ++LP + + D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLEVDNPAGATGPARLIDRRFAELPDCIAAGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + + R SK + G +
Sbjct: 64 FNDTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPQPGATIRLAD- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ T+ ++ L + I G +PLPPYI DA D Y
Sbjct: 118 ----AFDVTIGERVEPFYTLHF----PGDCLTLIEQFGRLPLPPYIEHD--PDATDETRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 168 QTVFAQNPGAVAAPTAGLHFDEALLARLDARGVERATLTLHVGAGTFQPVRVENLAEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE + A + + ++RG R+++VGTTS+R LE A + + S T+IF
Sbjct: 228 HSEWYHLPQSLADKIGATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAAASTETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E ++ Y+HAI YRF+SYGD LL
Sbjct: 288 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIREAYRHAIEARYRFFSYGDAMLL 347
Query: 357 FQK 359
++
Sbjct: 348 TRR 350
>gi|91200075|emb|CAJ73118.1| strongly similar to S-adenosylmethionine-tRNA
ribosyltransferase-isomerase [Candidatus Kuenenia
stuttgartiensis]
Length = 367
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 127/359 (35%), Positives = 195/359 (54%), Gaps = 17/359 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++DFDLP IA +P RD+ARL+V++ I S++ +L D +V
Sbjct: 23 KLSDYDFDLPKELIAQKPTEKRDNARLLVLYRRSG---RIEHRRFSEIAGYLRPEDLLVL 79
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI +++ G + + + + N W + + ++KKG+ ++ +
Sbjct: 80 NNTKVIPSRIAGKK-----PQGAYVDLLFIEELEDNHWKALLKSNGLLKKGEKIYLDNAA 134
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK---RPIDARDYV 178
+ L D ++ +G + I G +PLPPYI R + D
Sbjct: 135 VSACLLVKHEDNSW-----ILRIENGANIRELIHRTGEMPLPPYIKRPKKNNTLSTLDAE 189
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ +G++AAPTAGLHF+ ++L ++ + G + FVTLHV GTF+P+K E+ +H
Sbjct: 190 RYQTVFAQKEGAIAAPTAGLHFSEDVLGKIRNSGTDIAFVTLHVRLGTFLPIKTEEIKNH 249
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E + K+RGGRI++ G+TS R LET + I +SG+T++FI
Sbjct: 250 RMHKEYYEYTKELLPKITITKNRGGRIIATGSTSCRTLETIALNNNIHQ-FSGYTDLFIY 308
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F+ VD L++NFHLPK+TL +LVSAF G E+ Y+ A YRFYSYGD L+
Sbjct: 309 PPYPFQYVDALITNFHLPKTTLFLLVSAFAGREQIFNAYEIAKKEGYRFYSYGDCMLII 367
>gi|238026275|ref|YP_002910506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia glumae BGR1]
gi|237875469|gb|ACR27802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia glumae BGR1]
Length = 350
Score = 367 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 145/362 (40%), Positives = 198/362 (54%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V + P + D ++LP L + D +VF
Sbjct: 3 KLSDFDFDLPPELIAQTALPERSASRLLEV-GGTAGPARLVDRRFTELPDCLAAGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + I + P + R SK G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGRIEVLIERVTGPRTALAQIRASKSPAAGATLTLAD-- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
E TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 115 ---AFEVTVGERVEPFFTLHF----PDDCLTLIERHGRLPLPPYIEHD--PDATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF LL+ L + G++ +TLHVGAGTF PV+V++ DH MH
Sbjct: 166 TVFASNPGAVAAPTAGLHFDEALLATLRARGVETATLTLHVGAGTFQPVRVDNIADHRMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFI 297
SE + + + + ++RGGR+++VGTTS+R LE A + + T+IFI
Sbjct: 226 SEWYELTDALVERIAATRARGGRVIAVGTTSMRALEAAARDAEAAGRPLAATRAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI+ YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIEPIRAAYRHAIAERYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|149277787|ref|ZP_01883927.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Pedobacter sp. BAL39]
gi|149231475|gb|EDM36854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Pedobacter sp. BAL39]
Length = 349
Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats.
Identities = 134/361 (37%), Positives = 194/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD ARLMV+H + I + D+ ++ + D ++
Sbjct: 1 MKLSQFKFNLPESLVANNPSEHRDEARLMVLHKDSG---KIEHKIFKDVLSYFDDQDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + I +F + E + I ++G PLP YI R A+D
Sbjct: 114 DDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRKNIEILGETPLPKYIK--RKATAQD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ L+ RL G+ VTLHVG GTF V+VED
Sbjct: 169 KERYQTIFAKHEGAVAAPTAGLHFSRELMKRLELKGVNFAEVTLHVGLGTFRSVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I+ A +N +I +VGTTS+R +E+A + + + +T+ F
Sbjct: 229 KHKMDSEQFIIEQKDADIVNKAIEHKRKICAVGTTSMRAIESAVSSGRTLKAANDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLLM+VSAF G + + Y A+ YRFYSYGD L+
Sbjct: 289 IFPPYDFSIANSMITNFHTPESTLLMMVSAFGGYDYVRHAYDVALKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|326566011|gb|EGE16171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 12P80B1]
Length = 363
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 149/365 (40%), Positives = 205/365 (56%), Gaps = 22/365 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP IA P+ R S+RL+ V N D +DLP L S D +V
Sbjct: 15 LLSDYDYHLPDDLIARYPLNERTSSRLLHVSKNSC-----QDLRFTDLPNLLKSGDLLVL 69
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFFS 119
N+TKVI A+L+G + E I L ++ N + R S+ K G L+ +
Sbjct: 70 NDTKVIKARLHGQKQTGGA-VEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTLNLAN 128
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
++++ATVI + + IL S +L G +P+PPY R D D
Sbjct: 129 ----NQMQATVIGRQDNLFILGFRSPILADL----DNYGQMPIPPYFE--RKADETDDER 178
Query: 180 YQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV++ D
Sbjct: 179 YQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVDNLAD 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNI 295
H+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G T I
Sbjct: 239 HVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLGDTQI 298
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYGD
Sbjct: 299 FIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYGDAMF 358
Query: 356 LFQKR 360
L + +
Sbjct: 359 LEKAQ 363
>gi|296113505|ref|YP_003627443.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis RH4]
gi|295921199|gb|ADG61550.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis RH4]
gi|326559375|gb|EGE09800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 46P47B1]
gi|326568088|gb|EGE18172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis BC7]
gi|326572408|gb|EGE22400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis BC8]
Length = 357
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 149/365 (40%), Positives = 205/365 (56%), Gaps = 22/365 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP IA P+ R S+RL+ V N D +DLP L S D +V
Sbjct: 9 LLSDYDYHLPDDLIARYPLNERTSSRLLHVSKNSC-----QDLRFTDLPNLLKSGDLLVL 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFFS 119
N+TKVI A+L+G + E I L ++ N + R S+ K G L+ +
Sbjct: 64 NDTKVIKARLHGQKQTGGA-VEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTLNLAN 122
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
++++ATVI + + IL S +L G +P+PPY R D D
Sbjct: 123 ----NQMQATVIGRQDNLFILGFRSPILADL----DNYGQMPIPPYFE--RKADETDDER 172
Query: 180 YQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV++ D
Sbjct: 173 YQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVDNLAD 232
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNI 295
H+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G T I
Sbjct: 233 HVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLGDTQI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYGD
Sbjct: 293 FIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYGDAMF 352
Query: 356 LFQKR 360
L + +
Sbjct: 353 LEKAQ 357
>gi|237742323|ref|ZP_04572804.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 4_1_13]
gi|229429971|gb|EEO40183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 4_1_13]
Length = 351
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 128/355 (36%), Positives = 197/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+L++++ I ++ +L D +V N
Sbjct: 13 LSDYDYFLPEELIGQKPREPRDSAKLILINRKTGS---IEHKHFYNIVDYLQKGDVLVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIFGHKD-----TGGVLEILLVKRISLDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK + YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKFYHEG-SFEEILDKLGSMPLPPYITRK----LENKDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ E+ +H MH
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTENVLEHKMHE 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ ++G + T IFI PGY+
Sbjct: 237 ESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDKNGKLIAQKKDTGIFIYPGYK 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ ++ L++NFHLPKSTLLMLVSA E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 297 FKIINALITNFHLPKSTLLMLVSALYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 351
>gi|326572548|gb|EGE22537.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis CO72]
Length = 375
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 149/365 (40%), Positives = 205/365 (56%), Gaps = 22/365 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP IA P+ R S+RL+ V N D +DLP L S D +V
Sbjct: 15 LLSDYDYHLPDDLIARYPLNERTSSRLLHVSKNSC-----QDLRFTDLPNLLKSGDLLVL 69
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFFS 119
N+TKVI A+L+G + E I L ++ N + R S+ K G L+ +
Sbjct: 70 NDTKVIKARLHGQKQTGGA-VEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTLNLAN 128
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
++++ATVI + + IL S +L G +P+PPY R D D
Sbjct: 129 ----NQMQATVIGRQDNLFILGFRSPILADL----DNYGQMPIPPYFE--RKADETDDER 178
Query: 180 YQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV++ D
Sbjct: 179 YQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVDNLAD 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNI 295
H+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G T I
Sbjct: 239 HVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLGDTQI 298
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYGD
Sbjct: 299 FIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYGDAMF 358
Query: 356 LFQKR 360
L + +
Sbjct: 359 LEKAQ 363
>gi|160872276|ref|ZP_02062408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rickettsiella grylli]
gi|159121075|gb|EDP46413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rickettsiella grylli]
Length = 350
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 122/355 (34%), Positives = 192/355 (54%), Gaps = 16/355 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++F ++LP IA P R +RL+ ++ V+ D+ F+N D +V
Sbjct: 11 KPEDFFYELPEKLIAHYPTEQRTDSRLLCLNKTTG---VMQHKKFKDILDFINPGDLLVL 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L + ++ + + + SK +++G L
Sbjct: 68 NNTQVIPARLFAKKI-----TGGKVEILIERILERQRILAQLKSSKSLQRGTRLIL---- 118
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++ + ++++ T L+ + + ++ +G IPLPPYI R + D YQ
Sbjct: 119 -ENEMHVEIVNRTETMYELVFLIEPNLSILELLNQIGHIPLPPYIQ--RADELFDGERYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A + G++AAPTAGLHF +LL+ L + G+ + ++TLHVGAGTF P++ + +DH MH
Sbjct: 176 TVFASVPGAIAAPTAGLHFDEDLLTELKTKGVHIAYITLHVGAGTFQPIRSDRLEDHRMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + + + K RI++VGTT +R LETA + G INP +G TN+FI PG+
Sbjct: 236 HEYVTVSKTVCEQIIRAKQLNKRIIAVGTTVVRSLETAALQ-GQINPLAGETNLFIYPGF 294
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F +D L++NFHLP+STLLMLV A G E + YQ A+ YRF+SYGD +
Sbjct: 295 NFHCIDALITNFHLPRSTLLMLVCALGGYELIMQAYQEAVFQGYRFFSYGDAMWI 349
>gi|198274129|ref|ZP_03206661.1| hypothetical protein BACPLE_00266 [Bacteroides plebeius DSM 17135]
gi|198273207|gb|EDY97476.1| hypothetical protein BACPLE_00266 [Bacteroides plebeius DSM 17135]
Length = 351
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 131/363 (36%), Positives = 191/363 (52%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H + I D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALYPAKYRDESRLMVIHKSTG---EIEHVNFKDILNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLPP+I RP + D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGEPPLPPFI--HRPAEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT YAK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 169 EERFQTIYAKNEGAVTVPAAGLHFSRELMKRMEIKGIDFSFITMHAGLGNFRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F++A + +N K RG ++ ++GTT +R +ETA DG + + G+TN F
Sbjct: 229 KHKMDSEQMFVNAEACRIVNEAKDRGNKVCAIGTTVMRAIETAVGTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P ST+LMLV A+ G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVANAMVSNFHMPLSTMLMLVCAYGGYELIMDAYNIALKEDYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LDK 351
>gi|170691380|ref|ZP_02882545.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia graminis C4D1M]
gi|170143585|gb|EDT11748.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia graminis C4D1M]
Length = 352
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 141/363 (38%), Positives = 196/363 (53%), Gaps = 22/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV--ISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V + D ++LP + D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLQVDNAADADRAARLIDRRFAELPDCIAPGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + + R SK + G +
Sbjct: 64 FNDTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPQPGTTIRLAD- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L + I G +PLPPYI D+ D Y
Sbjct: 118 ----AFDVTVGERVEPFYTLHF----PADCLTLIEQFGRLPLPPYIEHD--PDSIDEARY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 168 QTVYAQNPGAVAAPTAGLHFDDALFARLDAHGVERATLTLHVGAGTFQPVRVENLAEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE + A + + K+RG R+++VGTTS+R LE A + + S T+IF
Sbjct: 228 HSEWYHLPQSLADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGRPLAATSTETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 288 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEQRYRFFSYGDAMLL 347
Query: 357 FQK 359
++
Sbjct: 348 TRR 350
>gi|326575583|gb|EGE25507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis O35E]
Length = 369
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 149/365 (40%), Positives = 205/365 (56%), Gaps = 22/365 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP IA P+ R S+RL+ V N D +DLP L S D +V
Sbjct: 9 LLSDYDYHLPDDLIARYPLNERTSSRLLHVSKNSC-----QDLRFTDLPNLLKSGDLLVL 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFFS 119
N+TKVI A+L+G + E I L ++ N + R S+ K G L+ +
Sbjct: 64 NDTKVIKARLHGQKQTGGA-VEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTLNLAN 122
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
++++ATVI + + IL S +L G +P+PPY R D D
Sbjct: 123 ----NQMQATVIGRQDNLFILGFRSPILADL----DNYGQMPIPPYFE--RKADETDDER 172
Query: 180 YQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV++ D
Sbjct: 173 YQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVDNLAD 232
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNI 295
H+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G T I
Sbjct: 233 HVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLGDTQI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYGD
Sbjct: 293 FIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYGDAMF 352
Query: 356 LFQKR 360
L + +
Sbjct: 353 LEKAQ 357
>gi|254468638|ref|ZP_05082044.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [beta
proteobacterium KB13]
gi|207087448|gb|EDZ64731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [beta
proteobacterium KB13]
Length = 347
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 134/359 (37%), Positives = 190/359 (52%), Gaps = 21/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EF++ LP IA P R +RL+ ++PN I D+ ++ + +N ND +V
Sbjct: 1 MNIEEFNYTLPEELIAQHPTDERSDSRLLQLNPNT---EEIIDNNFTNFLSLINQNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+++G + ++ + ++ NS+ + SK I G +
Sbjct: 58 FNDTKVIKARIHGHKKS-----GGKVEVLIEKIINQNSFVGHIGTSKKINAGLEIMV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L D+ + ++ I G +PLPPYI R + D Y
Sbjct: 110 -GNFKLTVKDRDENM------FIIETNDDIFNIIDCHGKLPLPPYIN--RDNEDFDDDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK G++AAPTAGLHF L F+TLHVG+GTF PV+ + DH M
Sbjct: 161 QTVFAKHDGAIAAPTAGLHFDDQFFLELSKQNFNFSFITLHVGSGTFQPVRNSNITDHKM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I + K GGRI+++GTT LR LE+A + + + TNIFI PG
Sbjct: 221 HSEEFMISQDVYDRIEQTKKNGGRIIAIGTTVLRALESAFAQPKKDSNFQ-KTNIFIYPG 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y+F+ VD L +NFHLPKSTL+MLVSAF G T Y HA+ YRF+SYGD + QK
Sbjct: 280 YQFKIVDSLFTNFHLPKSTLIMLVSAFAGHSFTMTAYAHAVKEKYRFFSYGDAMFIEQK 338
>gi|126440122|ref|YP_001060337.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 668]
gi|126455279|ref|YP_001067597.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106a]
gi|226198380|ref|ZP_03793949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pakistan 9]
gi|237813725|ref|YP_002898176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei MSHR346]
gi|242314533|ref|ZP_04813549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106b]
gi|254191552|ref|ZP_04898055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pasteur 52237]
gi|254259794|ref|ZP_04950848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710a]
gi|91207415|sp|Q3JNW2|QUEA_BURP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216709|sp|A3NZ26|QUEA_BURP0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216710|sp|A3NDB6|QUEA_BURP6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126219615|gb|ABN83121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 668]
gi|126228921|gb|ABN92461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106a]
gi|157939223|gb|EDO94893.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pasteur 52237]
gi|225929563|gb|EEH25581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pakistan 9]
gi|237503197|gb|ACQ95515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei MSHR346]
gi|242137772|gb|EES24174.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106b]
gi|254218483|gb|EET07867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710a]
Length = 360
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 144/362 (39%), Positives = 198/362 (54%), Gaps = 21/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFI 297
SE + + + + ++RGGR+++VGTTS+R LE A + + T+IFI
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDIFI 287
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 288 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAMLLT 347
Query: 358 QK 359
++
Sbjct: 348 RR 349
>gi|160902969|ref|YP_001568550.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Petrotoga
mobilis SJ95]
gi|160360613|gb|ABX32227.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Petrotoga
mobilis SJ95]
Length = 341
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 123/356 (34%), Positives = 189/356 (53%), Gaps = 23/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++++++LP IA PV PRDS +LMV++ I + D+ +L D +V N
Sbjct: 8 LEQYNYELPEELIAQEPVEPRDSCKLMVLNRR---VKSIEHKVFRDIKNYLRPGDLLVLN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRV-SPNSWSVYARPSKVIKKGDILHFFSQD 121
NT+VI A+L G + ++ L + + +W +P IKKG+ L F
Sbjct: 65 NTRVIPARLYGKKE-----TGAKVEVLLLEKDGNDKTWKALVKPGGKIKKGNKLIF---- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L TV++ G +L F ++ +G +PLPPYI ++ YQ
Sbjct: 116 -EDDLVCTVVEHLEDGSRILEFD--DPNFFSKLPKIGEVPLPPYIKKQIDD----PEKYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
TTYAK G+VAAPTAGLHFT L+ L G++ VTLHVG GTF PV D +H +H
Sbjct: 169 TTYAKEDGAVAAPTAGLHFTQELIDELTDYGVRFAEVTLHVGLGTFRPVSAADIRNHQIH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + + + K+ G R+++ GTT +R LE+ + +G T+++I P +
Sbjct: 229 EEYYTVSKSVLRDIVRAKAEGKRVIATGTTVVRTLESIAR---NPDKLAGKTDLYIYPPF 285
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ +D +++NFHLPKS+LL LVSAF G + Y+ A YRF+S+GD +
Sbjct: 286 EFKIIDAMITNFHLPKSSLLFLVSAFAGQDFIMNSYEIAKEKKYRFFSFGDAMFII 341
>gi|325299411|ref|YP_004259328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
gi|324318964|gb|ADY36855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
Length = 351
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 194/363 (53%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP RIAL PV RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEERIALHPVKYRDESRLMVVHKSTG---EIEHVIFKDILNYFDDQDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E +R + +G PLPP+I +RP + D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKRALYALGEPPLPPFI--RRPAEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 169 TERFQTIFAKNEGAVTVPAAGLHFSRELMKRMEIKGINFAFITMHCGLGCFRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI+A + +N+ K ++ +VGT+ +R +ETAT DG + + G+TN F
Sbjct: 229 KHKMDSEQMFINAEACKIVNTAKDNDHKVCAVGTSVMRAVETATGTDGHLKEYEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D +++NFH+P ST+LML ++ G E YQ A+ YRF +YGD L+
Sbjct: 289 IFPPYDFVLPDAMVTNFHMPLSTMLMLTCSYGGYELIMDAYQMALKEDYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LNK 351
>gi|257094069|ref|YP_003167710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046593|gb|ACV35781.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 343
Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats.
Identities = 140/358 (39%), Positives = 200/358 (55%), Gaps = 19/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP IA +P R ++RL+ + + D S+LP +++ D +VFN
Sbjct: 4 IDDFDFDLPTELIAQQPTPERTASRLLEL-----ADGGLHDRRFSELPQLVDAGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + +I + + R SK K G +
Sbjct: 59 DTRVIRARLFGHKES-----GGQIEVLIERIIDARHALAQIRASKSPKPGSRIVL----- 108
Query: 123 QSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ + V + ++G +L I G +PLPPYI D YQ
Sbjct: 109 EDAIALNVCGRSGKHGEFFALELAGPGDLWTLIERHGRLPLPPYITHAAGSDD--EARYQ 166
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTAGLHF LL +L + ++V ++TLHVGAGTF PV+V +H MH
Sbjct: 167 TVFARQPGAVAAPTAGLHFDDALLGQLAACSVEVAWLTLHVGAGTFQPVRVHAVAEHRMH 226
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E I T A+ ++R G++++VGTTSLR LE A +DG + + T+IFITPGY
Sbjct: 227 AERFEIPPATIAAIARTRARAGKVIAVGTTSLRALEAAA-QDGELRAGAAETDIFITPGY 285
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
RF+ VD L++NFHLPKSTLLMLVSAF G++ + Y HAI H YRF+SYGD LL ++
Sbjct: 286 RFQVVDRLITNFHLPKSTLLMLVSAFAGLDAIRTAYAHAIRHGYRFFSYGDAMLLSRE 343
>gi|87309884|ref|ZP_01092018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blastopirellula marina DSM 3645]
gi|87287648|gb|EAQ79548.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blastopirellula marina DSM 3645]
Length = 348
Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats.
Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 10/355 (2%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++D+ LP IA P+ R ARL+VV I + DLP L D +V N
Sbjct: 4 IEQYDYRLPKELIAQEPLEKRADARLLVVDRKSG---QIEHRYIRDLPEILQPTDHLVLN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKV+ A+L G R W V A+ I G+++ +++
Sbjct: 61 NTKVVPARLVGRR----TLTGGRWQGLYLESDINGHWLVLAKTRGKIAAGEMVTLENRET 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + ++ G + S L + VG +PLP YI + YQT
Sbjct: 117 KEDISLRLVASLGVGMWAVEPESSESTL-EILERVGRVPLPHYIREGEMMPDDWK-RYQT 174
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ G+VAAPTAGLHF++ LL +L + + V +VTLHVG GTF PV V+ D+H+MH
Sbjct: 175 VFAEQPGAVAAPTAGLHFSTELLKKLTNNDLLVDYVTLHVGIGTFRPVSVDQLDEHVMHK 234
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E G I + + K+ GGR ++VGTT R++ETA G + PW G T++FI P +
Sbjct: 235 EWGEIREEAVERILETKAAGGRNIAVGTTVARVMETAARS-GELQPWRGQTDLFIRPPFE 293
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F AVD L++NFHLPKSTLL+LV F G E ++ Y AI YRFYSYGD L+
Sbjct: 294 FHAVDALLTNFHLPKSTLLILVRTFGGEELMREAYAEAIREEYRFYSYGDAMLIL 348
>gi|32473565|ref|NP_866559.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopirellula baltica SH 1]
gi|32398245|emb|CAD78340.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopirellula baltica SH 1]
Length = 402
Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats.
Identities = 145/372 (38%), Positives = 202/372 (54%), Gaps = 25/372 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LP IA P+ R ARLMV+ I H V DLP L + D +V N
Sbjct: 37 LDLYDYELPRELIAQEPLQNRVDARLMVIDRASG---EIEHHHVRDLPQLLRAEDVMVKN 93
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L G R R + L + W + + ++ G+ + +D
Sbjct: 94 NSRVVPARLFGRRTKTGGRWQG---LFLRSDRATGVWELLTKTRGTLQTGETITLDDRDA 150
Query: 123 QSRLEATVIDKWNTGEIL--------LVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
++ E VI + + G +L IE + + G +P+PPYI +DA
Sbjct: 151 RAGGELMVIGRDDQGHLLVQPVPNESFEGPPQAIEPGKWLDKYGRVPIPPYIRDGHMVDA 210
Query: 175 RDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D +YQT +A + GSVAAPTAGLHFT LL + VTLHVG GTF P+
Sbjct: 211 -DVTNYQTVFASTNPEDAGSVAAPTAGLHFTKQLLDEIAKGQTASAEVTLHVGIGTFRPI 269
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED------G 284
+V+D D H MH E G ID + +N +S GGR V+VGTTS+R+LE+ G
Sbjct: 270 EVDDIDQHQMHEEWGRIDEDAVETINDRRSGGGRCVAVGTTSVRVLESCVANRNETNGRG 329
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+ W+G T+IFI P YRF VD LM+NFHLPKS+LL+LVSAF G E ++ YQ AI++
Sbjct: 330 VAATWTGATDIFIKPPYRFGVVDALMTNFHLPKSSLLVLVSAFAGHELIRRAYQEAIANE 389
Query: 345 YRFYSYGDTSLL 356
YRF+SYGD L+
Sbjct: 390 YRFFSYGDAMLI 401
>gi|114566953|ref|YP_754107.1| S-adenosylmethionine tRNA ribosyltransferase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|122318043|sp|Q0AX18|QUEA_SYNWW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114337888|gb|ABI68736.1| S-adenosylmethionine tRNA ribosyltransferase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 352
Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats.
Identities = 133/356 (37%), Positives = 189/356 (53%), Gaps = 14/356 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + +DLPP IA P RDS+RL+V+ ++D D+ +L DA+V
Sbjct: 11 RLSTYYYDLPPELIAQYPAEYRDSSRLLVLDRKSGD---LNDRAFKDISLYLKKGDALVL 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N T+VI A+ + + L ++ + W +P++ +K G +
Sbjct: 68 NETRVIPARFFAYKES-----GARVEILLLKKLGDD-WEALVKPARRLKAGSRVFLSPDK 121
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
L ++++ + V ++ + + G IPLPPYI RP + D YQ
Sbjct: 122 ---PLVIEIVEELDFAGGRRVRFQDSVDEDTLLQEQGHIPLPPYIN--RPDEELDRERYQ 176
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA GSVAAPTAGLHFT +LL + GI + + LHVG GTF PVK ED H MH
Sbjct: 177 TVYACKSGSVAAPTAGLHFTPDLLKEITLQGINIVRIVLHVGMGTFRPVKNEDIRQHNMH 236
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A LN + GG+IV+VGTT +R LE+ +D G TN +I PGY
Sbjct: 237 LEYYEVAEDAAALLNLTRESGGQIVAVGTTVVRTLESVYNKDCGFLAGKGETNKYIFPGY 296
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+FRA+D L++NFHLP S+LLMLV+ F G E T Y+HA+ + YRF+SYGD L+
Sbjct: 297 QFRAIDKLLTNFHLPGSSLLMLVAGFAGTESTLAAYRHAVENRYRFFSYGDAMLVI 352
>gi|269792529|ref|YP_003317433.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100164|gb|ACZ19151.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 348
Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 198/360 (55%), Gaps = 23/360 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +D+ LP IA PV PRDS+RLMV+ + + + DL FL D +V
Sbjct: 8 LVDSYDYHLPEESIAQSPVEPRDSSRLMVIRRSDGS---VCHRIFRDLVDFLRPGDLLVM 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L G + + L + + W+ RP + ++ G ++ F
Sbjct: 65 NDTRVMRARLLGRKES-----GGSVEVFLLSPLDESRSAWTGMVRPGRKVRPGTVVRFSE 119
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G A + ++ G L+ F G +G +PLPPYI ++
Sbjct: 120 DPGH---LAVIQERLPDGLRLVHFP--GESGWEIARTLGEVPLPPYIENRQVDG----ER 170
Query: 180 YQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y+ + SVA+PTAGLHFT LLS L S G+ FVTL+VG GTF PVK + D
Sbjct: 171 YQTVYSDPSKELSVASPTAGLHFTRELLSELESRGVGRTFVTLNVGLGTFRPVKAQRASD 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH E + A +A+ + VK+RG R+V+VGTT +R LE+ P+ T++FI
Sbjct: 231 HVMHLETCLVSADSARMIREVKARGNRVVAVGTTVVRTLESYAINPLEGEPF--ETDLFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+RFR VD +++NFHLP+STLLMLV+AF G + Y+ A++ YRF+S+GD LL
Sbjct: 289 RPGFRFRVVDAMITNFHLPRSTLLMLVAAFGGYDTVMGAYREAVARGYRFFSFGDAMLLI 348
>gi|53720476|ref|YP_109462.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei K96243]
gi|254299192|ref|ZP_04966642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 406e]
gi|81607721|sp|Q63R06|QUEA_BURPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52210890|emb|CAH36878.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Burkholderia pseudomallei
K96243]
gi|157808970|gb|EDO86140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 406e]
Length = 360
Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats.
Identities = 144/362 (39%), Positives = 198/362 (54%), Gaps = 21/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFI 297
SE + + + + ++RGGR+++VGTTS+R LE A + + T+IFI
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDIFI 287
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 288 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAMLLT 347
Query: 358 QK 359
++
Sbjct: 348 RR 349
>gi|327541677|gb|EGF28201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopirellula baltica WH47]
Length = 402
Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats.
Identities = 144/372 (38%), Positives = 202/372 (54%), Gaps = 25/372 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LP IA P+ R ARLMV+ I H V DLP L + D +V N
Sbjct: 37 LDLYDYELPRELIAQEPLQNRVDARLMVIDRASG---EIEHHHVRDLPQLLRAEDVMVKN 93
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L G R R + L + W + + ++ G+ + +D
Sbjct: 94 NSRVVPARLFGRRTKTGGRWQG---LFLRSDRATGVWELLTKTRGTLQTGETITLDDRDA 150
Query: 123 QSRLEATVIDKWNTGEIL--------LVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
++ E VI + + G +L IE + + G +P+PPYI +DA
Sbjct: 151 RADGELMVIGRDDQGHLLVQPVPNESFEGPPQAIEPGKWLDKYGRVPIPPYIRDGHMVDA 210
Query: 175 RDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D +YQT +A + GSVAAPTAGLHFT LL + VTLHVG GTF P+
Sbjct: 211 -DVTNYQTVFASTNPEDAGSVAAPTAGLHFTKQLLDEIAKGQTASAEVTLHVGIGTFRPI 269
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED------G 284
+V+D D H MH E G I+ + +N +S GGR V+VGTTS+R+LE+ G
Sbjct: 270 EVDDIDQHQMHEEWGRIEEDAVETINDRRSGGGRCVAVGTTSVRVLESCVANRNETNGRG 329
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+ W+G T+IFI P YRF VD LM+NFHLPKS+LL+LVSAF G E ++ YQ AI++
Sbjct: 330 VAATWTGATDIFIKPPYRFGVVDALMTNFHLPKSSLLVLVSAFAGHELIRRAYQEAIANE 389
Query: 345 YRFYSYGDTSLL 356
YRF+SYGD L+
Sbjct: 390 YRFFSYGDAMLI 401
>gi|76810830|ref|YP_334741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710b]
gi|76580283|gb|ABA49758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710b]
Length = 372
Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats.
Identities = 144/362 (39%), Positives = 198/362 (54%), Gaps = 21/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 16 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 75
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 76 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 128
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 129 ---AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 179
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 180 TVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 239
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFI 297
SE + + + + ++RGGR+++VGTTS+R LE A + + T+IFI
Sbjct: 240 SESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDIFI 299
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 300 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAMLLT 359
Query: 358 QK 359
++
Sbjct: 360 RR 361
>gi|217421123|ref|ZP_03452628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 576]
gi|217396535|gb|EEC36552.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 576]
Length = 360
Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats.
Identities = 144/362 (39%), Positives = 197/362 (54%), Gaps = 21/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDNCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFI 297
SE + + + + ++RGGR+++VGTTS+R LE A + + T+IFI
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDIFI 287
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 288 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAMLLT 347
Query: 358 QK 359
++
Sbjct: 348 RR 349
>gi|121600954|ref|YP_991656.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei SAVP1]
gi|124383619|ref|YP_001027151.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10229]
gi|126449230|ref|YP_001082100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10247]
gi|167000544|ref|ZP_02266356.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei PRL-20]
gi|254178811|ref|ZP_04885465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 10399]
gi|166216706|sp|A3MPB4|QUEA_BURM7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216707|sp|A2S5D2|QUEA_BURM9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216708|sp|A1V0A3|QUEA_BURMS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|121229764|gb|ABM52282.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei SAVP1]
gi|124291639|gb|ABN00908.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10229]
gi|126242100|gb|ABO05193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10247]
gi|160694725|gb|EDP84733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 10399]
gi|243063598|gb|EES45784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei PRL-20]
Length = 360
Score = 365 bits (936), Expect = 7e-99, Method: Composition-based stats.
Identities = 144/362 (39%), Positives = 197/362 (54%), Gaps = 21/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLIDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDNCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFI 297
SE + + + + ++RGGR+++VGTTS+R LE A + + T+IFI
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDIFI 287
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 288 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAMLLT 347
Query: 358 QK 359
++
Sbjct: 348 RR 349
>gi|326559774|gb|EGE10184.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 7169]
gi|326565038|gb|EGE15238.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 103P14B1]
gi|326568506|gb|EGE18578.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis BC1]
gi|326574145|gb|EGE24093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 101P30B1]
Length = 357
Score = 365 bits (936), Expect = 7e-99, Method: Composition-based stats.
Identities = 149/365 (40%), Positives = 205/365 (56%), Gaps = 22/365 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP IA P+ R S+RL+ V N D +DLP L S D +V
Sbjct: 9 LLSDYDYHLPDDLIARYPLNERTSSRLLHVSKNSC-----QDLRFTDLPNLLKSGDLLVL 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFFS 119
N+TKVI A+L+G + E I L ++ N + R S+ K G L+ +
Sbjct: 64 NDTKVIKARLHGQKQTGGA-VEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTLNLAN 122
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
++++ATVI + + IL S +L G +P+PPY R D D
Sbjct: 123 ----NQMQATVIGRQDNLFILGFRSPILADL----DNYGQMPIPPYFE--RKADETDDER 172
Query: 180 YQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV++ D
Sbjct: 173 YQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVDNLAD 232
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNI 295
H+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G T I
Sbjct: 233 HVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHLHRIHGELVEFLGDTQI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYGD
Sbjct: 293 FIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYGDAMF 352
Query: 356 LFQKR 360
L + +
Sbjct: 353 LEKAQ 357
>gi|53726169|ref|YP_103943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 23344]
gi|67642347|ref|ZP_00441105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei GB8 horse 4]
gi|254202658|ref|ZP_04909021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei FMH]
gi|254207999|ref|ZP_04914349.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei JHU]
gi|81604315|sp|Q62H77|QUEA_BURMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52429592|gb|AAU50185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 23344]
gi|147746905|gb|EDK53982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei FMH]
gi|147751893|gb|EDK58960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei JHU]
gi|238523486|gb|EEP86924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei GB8 horse 4]
Length = 360
Score = 365 bits (936), Expect = 7e-99, Method: Composition-based stats.
Identities = 144/362 (39%), Positives = 196/362 (54%), Gaps = 21/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLIDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERIALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDNCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFI 297
SE + + + + ++RGGR+++VGTTS+R LE A + + T+IFI
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDIFI 287
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 288 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAMLLT 347
Query: 358 QK 359
++
Sbjct: 348 RR 349
>gi|320354867|ref|YP_004196206.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfobulbus propionicus DSM 2032]
gi|320123369|gb|ADW18915.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfobulbus propionicus DSM 2032]
Length = 367
Score = 365 bits (936), Expect = 8e-99, Method: Composition-based stats.
Identities = 133/370 (35%), Positives = 193/370 (52%), Gaps = 22/370 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+DLPP RIA P RD +RL+V+ N + +D+ L +D +V
Sbjct: 7 RLDAYDYDLPPERIAQFPEPQRDHSRLLVLDTN---VPELVHRRFADIVDHLRPSDLLVI 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVS------------PNSWSVYARPSKVI 109
N+TKV A+L G + ++ L + + + SK
Sbjct: 64 NSTKVFPARLLGRKE-----TGGKVELFLLNFPHSPTTTDPTSSWHEATATALLKSSKRP 118
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
K G L F + +R++A + L G L+ + G +PLPPYI R
Sbjct: 119 KVGGSLLF-DEQFHARVDAL-LGDGKAEVTLRYRPAPGQSLQDLLERHGQMPLPPYIDRP 176
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D YQT YA GSVAAPTAGLHF+ LL+++ + + + + LHVG GTF P
Sbjct: 177 NGNVEEDLHRYQTRYASQVGSVAAPTAGLHFSDALLAQIRAKRVDIAPLVLHVGYGTFAP 236
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+ ED +H +H E I A TA +N K+ GGRI +VGTT++R LE A + G + P
Sbjct: 237 VRSEDIREHRIHREWVEIPAATAAKVNQTKAAGGRIWAVGTTTVRSLEFAADQHGQVQPG 296
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
+ ++FI PG++FR +D L++NFHLPKS+LL LVSA G + Y+ AI+ +YRF+S
Sbjct: 297 ASECDLFIYPGFQFRVIDNLITNFHLPKSSLLFLVSALAGRQRILAAYKEAIASSYRFFS 356
Query: 350 YGDTSLLFQK 359
YGD + K
Sbjct: 357 YGDAMAIVTK 366
>gi|295675565|ref|YP_003604089.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1002]
gi|295435408|gb|ADG14578.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1002]
Length = 352
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 146/363 (40%), Positives = 200/363 (55%), Gaps = 22/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL--VISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V + + D ++LP L D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLDVDAAGTADGAARLIDRRFTELPERLAPGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + S R SK + G +
Sbjct: 64 FNDTKVLKARFFGQKAS-----GGKIEVLVERLTGERSALAQIRASKSPQAGTTIRLAD- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ + L + I G +PLPPYI DA D Y
Sbjct: 118 ----AFDVTVGERVDQFYTLHF----PDDCLTLIEQYGRLPLPPYIEHD--PDATDETRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL+RL ++GI+ +TLHVGAGTF PV+VE+ +H M
Sbjct: 168 QTVYAQNPGAVAAPTAGLHFDDALLARLDALGIERATLTLHVGAGTFQPVRVENIAEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE + A + + K+RG R+++VGTTS+R LE A + + S T+IF
Sbjct: 228 HSEWYHLPQALADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGHPLAAASAETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 288 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLL 347
Query: 357 FQK 359
++
Sbjct: 348 TRR 350
>gi|226946087|ref|YP_002801160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Azotobacter
vinelandii DJ]
gi|259551438|sp|C1DE77|QUEA_AZOVD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226721014|gb|ACO80185.1| Queuosine biosynthesis protein: S-adenosylmethionine tRNA
ribosyltransferase [Azotobacter vinelandii DJ]
Length = 349
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 199/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+V+ + +DL L D +V
Sbjct: 1 MRVADFHFELPESLIARHPLAERRASRLLVLDGVTGD---LQHRRFADLLDHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGWKAS-----GGKLEILVERVLDDERVLAHVRASKSPKAGSRI-LIEG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++++ A + L F + L VG +PLPPYI RP +A D Y
Sbjct: 112 GGEAQMLAR-----HDALFELRFDQRVLPLL---ERVGHMPLPPYI--DRPDEAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF LL+ + + FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAARAGAVAAPTAGLHFDEALLAAIGEKDVATAFVTLHVGAGTFQPVRVERIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HREWLEVGQEVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGVLRPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 338
>gi|239818027|ref|YP_002946937.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus S110]
gi|239804604|gb|ACS21671.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus S110]
Length = 348
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 134/361 (37%), Positives = 196/361 (54%), Gaps = 20/361 (5%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M + +FDFDLPP +A P R ++RL+ +D + LP+ L + D
Sbjct: 1 MRAFTLSDFDFDLPPELVAQHPASERTASRLL-----DGTGSTPADRIFKSLPSLLRAGD 55
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+VFN+T+V+ A+L G + ++ + + + + + SK G L
Sbjct: 56 LLVFNDTRVVKARLFGEK-----PTGGKLELLVERVLQGHEVVAHMKVSKKPPVGTTLQM 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
++ L ++ S +G + ++ G +PLPPYI D
Sbjct: 111 VGG-FRATLLGRWPEEDGALFRFGFESGAGEDPYALMARCGHVPLPPYIMHSDSADDER- 168
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A++ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF PVK E+ +
Sbjct: 169 -RYQTVFARVPGAVAAPTAALHFDEALLAELETRGVQRASVTLHVGAGTFQPVKTENIAE 227
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E + T +A+ K+RGGR+V+VGTT++R LE+ +G T IFI
Sbjct: 228 HTMHAERYEVPEATQRAIADCKARGGRVVAVGTTTVRTLESWAKSG----EAAGDTRIFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+ F VD+L++NFHLPKSTL+MLVSAF G E +Y HAI+ YRF+SYGD LL
Sbjct: 284 TPGFVFEHVDLLVTNFHLPKSTLMMLVSAFAGYEHVMALYAHAIAQHYRFFSYGDAMLLA 343
Query: 358 Q 358
+
Sbjct: 344 R 344
>gi|326315377|ref|YP_004233049.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323372213|gb|ADX44482.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 369
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 141/367 (38%), Positives = 195/367 (53%), Gaps = 19/367 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R ++RL+ V D + +LP L D +VFN
Sbjct: 12 LSDFDFSLPPELIAQHPAPERSASRLL-----DGRADVPVDRIFRELPDLLQPGDLLVFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVS-PNSWSVYARPSKVIKKGDILHFFSQD 121
+T+V+ A++ G + + N + + SK G +LH
Sbjct: 67 DTRVVKARVFGEKASGGKVELLIERVLVGPNGEAGNEVVAHMKVSKKPAVGAMLHMAGGP 126
Query: 122 GQSRLEATVIDKWNT-GEILLVF---SISGIELERQISLVGTIPLPPYIARK-----RPI 172
AT++ +W L F S G + G +PLPPYI R P
Sbjct: 127 AGGGFGATLLGRWPDEDGPLFRFALSSPDGEGPHALMERHGHMPLPPYIERHQDGGGDPD 186
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
A D YQT +A+ G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PVK
Sbjct: 187 AAEDAERYQTVFARAPGAVAAPTAALHFDEGVLASLAARGVERASVTLHVGAGTFQPVKT 246
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E DH MHSE + T AL + RGGR+V+VGTT++R LE+ +G
Sbjct: 247 ESLADHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWARSG----QATGD 302
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPG+ F+ VD+L++NFHLPKSTL+ML+SAF G + +Y+HAI+ YRF+SYGD
Sbjct: 303 TDIFITPGFAFQVVDLLVTNFHLPKSTLMMLISAFTGYDHAMDLYRHAIAQRYRFFSYGD 362
Query: 353 TSLLFQK 359
LL ++
Sbjct: 363 AMLLARR 369
>gi|34541200|ref|NP_905679.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis W83]
gi|34397516|gb|AAQ66578.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis W83]
Length = 350
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 125/361 (34%), Positives = 184/361 (50%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +R+MVVH I + D+ + + D V
Sbjct: 1 MKLSKFKFNLPEELIALEPTKFRDESRMMVVHRRTG---EIEHRVFKDILEYFDKGDTFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNT+V A+L G + + +I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNNTRVFPARLYGNK----EKTGAQIEVFLLRELNERLKLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ + L A VID + L F G E + + +G PLP YI R ++ D
Sbjct: 114 NDE---ELVAEVIDNTTSRGRTLRFLYDGSHDEFKELLFQLGQTPLPKYI--DRDVNKED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ+ +AK++G+V AP A LHF+ L+ RL ++T+H G + + VED
Sbjct: 169 PERYQSIFAKVEGAVVAPAASLHFSRELMKRLEIKDCHFSYITVHHALGAYRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +I + +N +I +VGT+ LR LETA + DG + P+ G+TN F
Sbjct: 229 KHKMDSEEMYITEESCININRSWDEEKKICAVGTSILRALETAVSTDGHLKPFEGWTNRF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F L++NFH+P STLLM+ +AF G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYEFHLPSALVTNFHMPLSTLLMMTAAFGGHELIMSAYDLAVKEKYRFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|313679722|ref|YP_004057461.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Oceanithermus profundus DSM 14977]
gi|313152437|gb|ADR36288.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Oceanithermus profundus DSM 14977]
Length = 339
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 141/355 (39%), Positives = 192/355 (54%), Gaps = 23/355 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++D+ LP RIA PRD +RLMVV +LP FL + D +VF
Sbjct: 7 RIEDYDYPLPEERIAQEGASPRDHSRLMVVERGRGVRA---HARFFELPRFLRAGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N TKVI A++ GV+ + L +P W RP + ++ G + F
Sbjct: 64 NETKVIPARIFGVKEG-----GARVEALLVREEAPERWWAMVRPGRRLRPGARVRF---- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
L A V + G LLVFS + + +G PLPPYI R D YQ
Sbjct: 115 --GELAAEVAAVDDEGLRLLVFS---GPVRPLLERLGRTPLPPYIHR-----PVDPERYQ 164
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ +GSVAAPTAGLHFT LL L ++G++ V LHVG GTF PVK ++H MH
Sbjct: 165 TVYARREGSVAAPTAGLHFTPRLLEELAAMGVEQARVVLHVGPGTFQPVKGA-IEEHRMH 223
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E + A A +N + G R+V+VGTT +R LE A + P +G T +FI P Y
Sbjct: 224 AERYEVPAEAAARVNRALAEGRRVVAVGTTVVRTLEAAFAPGEGVRPGAGETRLFIRPPY 283
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
RF+ V L++NFHLP+STLLMLV+AF G E T Y+ A++ YRF+S GD ++
Sbjct: 284 RFQVVGGLVTNFHLPRSTLLMLVAAFAGYEVTMAAYREALARDYRFFSLGDAMVI 338
>gi|261856761|ref|YP_003264044.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halothiobacillus neapolitanus c2]
gi|261837230|gb|ACX96997.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halothiobacillus neapolitanus c2]
Length = 367
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 142/362 (39%), Positives = 199/362 (54%), Gaps = 18/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K FD+ LPP IA RP+ PR+ ARL+V+ P + + ++D P L+ D ++
Sbjct: 1 MHTKLFDYTLPPELIAHRPIEPREHARLLVLEKEH-TPNDLRECRIADFPDLLHPGDLLI 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A++ G + +I + S + R SK G LH
Sbjct: 60 LNNTRVIPARVFGHKAS-----GGKIEVLIERLQDGFSAWCHIRASKSPAPGTTLHM--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQ+ L + L ++ ++ G +PLPPYI R DA+D DY
Sbjct: 112 DGQATLTVKNRQDA-LFLVELTPDSLNPDVLTWLNRAGHMPLPPYI--DRADDAQDRHDY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LH T NLL ++ + G+K FVTLHVGAGTF PV+V++ +H M
Sbjct: 169 QTVFAAHDGAVAAPTASLHLTENLLEQIAAKGVKTAFVTLHVGAGTFQPVRVDNIQEHTM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED------GIINPWSGFTN 294
HSE + T A+++ + RGGR+V VGTT+LR +ETA E+ I P+ G T
Sbjct: 229 HSEWLNVPEETVAAIDATRERGGRVVCVGTTALRAIETAARENPTAAAQRRIAPYQGDTR 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ PG D L++NFHLP+STLLMLVSA G E Y +A+ +RF+SYGD
Sbjct: 289 LFLYPGQPVHVTDALLTNFHLPQSTLLMLVSALAGRERILAAYDYAVRAGFRFFSYGDAM 348
Query: 355 LL 356
+
Sbjct: 349 FI 350
>gi|313158313|gb|EFR57715.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alistipes
sp. HGB5]
Length = 349
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 130/361 (36%), Positives = 193/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++ ++ P +A P RD +RLMV++ + + D+ + + D V
Sbjct: 1 MKLSQYGYEFAPEMLAKHPTENRDDSRLMVINRAKGT---VEHRIFKDIIEYFDEKDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + EI L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGAEIEIFLLRELNRELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E ++ + +G PLP + ++ D
Sbjct: 114 DDD---LLVAEVIDNTTSRGRTLRFLFDGSYEEFKQALFSLGETPLPK--WVRDKVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ +G+VAAPTAG+HF+ +L+ R+ GI F+TLHVG G F V VED
Sbjct: 169 AERYQTIFARHEGAVAAPTAGMHFSKHLMKRMEIKGIDKSFITLHVGLGNFRTVDVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+ A+A+NS K G +IV++GTT +R +ETA + +G+I P G+TN F
Sbjct: 229 KHKMDSEQFFVTDEAAEAVNSAKRDGHKIVAIGTTVMRTVETAVSTNGMIKPMEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I Y F D +++NFHLP ST LM+V+AF G E Y+ A YRF +YGD L+
Sbjct: 289 IFAPYEFTVADAMVTNFHLPYSTQLMMVAAFGGYETVMNAYKVAKEEGYRFGTYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|283780730|ref|YP_003371485.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pirellula
staleyi DSM 6068]
gi|283439183|gb|ADB17625.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pirellula
staleyi DSM 6068]
Length = 349
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 138/358 (38%), Positives = 195/358 (54%), Gaps = 10/358 (2%)
Query: 1 MM-VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M + +DF+LP +A P+ R ARL+VV I H + DLP L D +
Sbjct: 1 MNELDAYDFELPRDLVAQHPLPHRTDARLLVVDR---AKQSIDHHHIRDLPGLLRYGDHL 57
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+VI A+L G R + S +W V + + G+ + S
Sbjct: 58 VMNDTRVIPARLVGRR----EQTGARWSGLFLSADDQGNWQVLGKTRGKLLPGEAILVLS 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D + ++ ++ K G ++ G + + VG +PLPPYI I+A +
Sbjct: 114 WDLRQSIKLRLLTKLEGGVWVVRPEPLG-DPWELLDSVGRVPLPPYIRDGEMIEADS-TN 171
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +AK +G+VAAPTAGLHFT LL ++ G+ VTLHVG GTF PV E +H+
Sbjct: 172 YQTVFAKTRGAVAAPTAGLHFTPELLEKVKVAGVLSSHVTLHVGLGTFRPVTAEKLAEHV 231
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + P + + KSRGGR+++VGTT R LE+A G + P+SG TN+FI P
Sbjct: 232 MHSEFCDVSQPAVETILKTKSRGGRVIAVGTTVARSLESAAAPTGKLEPFSGPTNLFIRP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F +D L++NFHLP+STLL+LV F G E ++ Y+ AI YRFYSYGD L+
Sbjct: 292 PFTFCVLDGLLTNFHLPRSTLLVLVRTFGGDELIQQAYREAIEERYRFYSYGDAMLIL 349
>gi|120609290|ref|YP_968968.1| queuosine biosynthesis protein [Acidovorax citrulli AAC00-1]
gi|120587754|gb|ABM31194.1| Queuosine biosynthesis protein [Acidovorax citrulli AAC00-1]
Length = 369
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 142/367 (38%), Positives = 197/367 (53%), Gaps = 19/367 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R ++RL+ V D + +LP L D +VFN
Sbjct: 12 LSDFDFSLPPELIAQHPAPERSASRLL-----DGRADVPVDRIFRELPGLLQPGDLLVFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVS-PNSWSVYARPSKVIKKGDILHFFSQD 121
+T+V+ A++ G + + N + + SK G +LH
Sbjct: 67 DTRVVKARVFGEKASGGKVELLIERVLVGTGGEAGNEVVAHMKVSKKPAVGAMLHMAGGP 126
Query: 122 GQSRLEATVIDKWNT-GEILLVFSISGIE---LERQISLVGTIPLPPYIARK-----RPI 172
AT++ +W L F++S + + G IPLPPYI R P
Sbjct: 127 AGGGFGATLLGRWPDEDGPLFRFALSSPDGAGPHALMERHGHIPLPPYIERHQEGGGDPD 186
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
A D YQT +A+ G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PVK
Sbjct: 187 AAEDAERYQTVFARAPGAVAAPTAALHFDEGVLASLAARGVERASVTLHVGAGTFQPVKT 246
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E DH MHSE + T AL + RGGR+V+VGTT++R LE+ +G
Sbjct: 247 ESLADHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWARSG----QGTGD 302
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPG+ F+ VD+L++NFHLPKSTL+ML+SAF G E +Y+HAI+ YRF+SYGD
Sbjct: 303 TDIFITPGFAFQVVDLLVTNFHLPKSTLMMLISAFTGYEHAMDLYRHAIAQRYRFFSYGD 362
Query: 353 TSLLFQK 359
LL ++
Sbjct: 363 AMLLARR 369
>gi|296114522|ref|ZP_06833175.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter hansenii ATCC 23769]
gi|295978878|gb|EFG85603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter hansenii ATCC 23769]
Length = 352
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 165/357 (46%), Positives = 222/357 (62%), Gaps = 14/357 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +FDFDLP + IA P PRDSAR++ V P D V DLP L + D +V
Sbjct: 4 LVSDFDFDLPVALIADHPARPRDSARMLEVPPQ----GAFCDRHVRDLPGCLRAGDILVA 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL +R I TL + +W AR S+ +K GDIL F
Sbjct: 60 NDTAVIPAQLAAMRGA------ARIGITLDRILPDGTWHALARNSRRLKPGDILTFAP-- 111
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
S + A V+ + G +++ F + G ++ + G + LPPYIAR D DY
Sbjct: 112 --SAVTAEVVVCEDAGGVVMRFDVEGEAFDQFLHDTGHLALPPYIARPDGPTEEDRKDYS 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ +G+VAAPTAGLHFT LLS L + G+ +TLHVGAGTF+P++ E +H MH
Sbjct: 170 TIFAQHRGAVAAPTAGLHFTPALLSGLEAAGVLRQTLTLHVGAGTFLPMRSEQISEHRMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A A +N+ ++ GGR+++VGTTSLRLLE+AT EDG+++P+ G T IFI PGY
Sbjct: 230 AERGTITAHAAHRINAARAAGGRVIAVGTTSLRLLESATDEDGVVHPFHGETAIFIRPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RFRAVD+L++NFHLP+STL MLVSAF G + Y+HA++ YRFYSYGD LL +
Sbjct: 290 RFRAVDMLLTNFHLPRSTLFMLVSAFAGQARMRAAYEHAMAAGYRFYSYGDACLLHR 346
>gi|78065287|ref|YP_368056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia sp. 383]
gi|91207416|sp|Q39JF4|QUEA_BURS3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77966032|gb|ABB07412.1| Queuosine biosynthesis protein [Burkholderia sp. 383]
Length = 355
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 197/361 (54%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V P + D ++LP+ +++ D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDG-TVAPARLVDRHFTELPSCISAGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 63 DTKVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F ++L I G +PLPPYI DA D YQT
Sbjct: 118 ------VTVGERVDPFFTLNFPEPCLDL---IEQYGRLPLPPYIEHD--PDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF +L RL ++G++ +TLHVGAGTF PV+V++ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPMLDRLDAMGVERATLTLHVGAGTFQPVRVDNIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARAADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEQRYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|282855627|ref|ZP_06264941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pyramidobacter piscolens W5455]
gi|282586557|gb|EFB91811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pyramidobacter piscolens W5455]
Length = 349
Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 181/352 (51%), Gaps = 14/352 (3%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LPP IA +P PRD RL+ V + D+ +L D +V N+T+
Sbjct: 12 YDYELPPELIAQKPAEPRDRCRLLAVRRADG---KLFHQHFHDILQWLRPGDVLVRNDTR 68
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A++ GV+ + EI S W RP + + +G + DG
Sbjct: 69 VMAARVEGVKVNGSA--QAEILLLRPEDDSEKCWEALVRPGRKLPEGARVRL---DGDVV 123
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ + K G ++F ++ G++PLPPYI + + DYQT YA
Sbjct: 124 VTIGAV-KSEDGVRRVIFPADC-DVRALAEANGSMPLPPYIHER----SSRPEDYQTVYA 177
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
K S AAPTAGLHFT LL + G+ + +TL VG GTF PVK ED H MHSE
Sbjct: 178 KDPRSAAAPTAGLHFTRELLREVAGRGVTIADITLEVGLGTFRPVKTEDIRRHHMHSEHC 237
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
+ + K GGR++++GTT +R LE + P T +FI PG++++
Sbjct: 238 VVPQDAYDKIVMAKKNGGRVIALGTTVVRTLEGMAATSAGLRPGVLETGLFIYPGFKYKV 297
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
VD L++NFHLPKSTL+MLV+AF G + T K Y A+ YRF+S+GD ++
Sbjct: 298 VDALITNFHLPKSTLMMLVAAFAGYDLTMKAYAEAVKERYRFFSFGDAMMIM 349
>gi|134280132|ref|ZP_01766843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 305]
gi|134248139|gb|EBA48222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 305]
Length = 360
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 143/362 (39%), Positives = 198/362 (54%), Gaps = 21/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDDCLVLIKRHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFI 297
SE + + + + ++RGGR++++GTTS+R LE A + + T+IFI
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAIGTTSMRALEAAARDAQAAGRPLAATRAETDIFI 287
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 288 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAMLLT 347
Query: 358 QK 359
++
Sbjct: 348 RR 349
>gi|282900339|ref|ZP_06308290.1| Queuosine biosynthesis protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194844|gb|EFA69790.1| Queuosine biosynthesis protein [Cylindrospermopsis raciborskii
CS-505]
Length = 369
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 151/366 (41%), Positives = 207/366 (56%), Gaps = 19/366 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D++LPP IA PV PRDS+RLMV++ PN DH+ DLP L D +V
Sbjct: 8 LSGYDYELPPELIAQNPVVPRDSSRLMVINSPNTGTSTPPLDHIFRDLPELLKPGDLLVM 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L N W +P K G + F Q
Sbjct: 68 NNTRVIPARLYGRKS-----TGARVEVLLLEEKQHNCWLALVKPGKYFNVGTEIIFDDQG 122
Query: 122 GQS------RLEATVIDK-WNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPID 173
S + A VI++ NTG LL F + + L + +G +PLPPYI ++
Sbjct: 123 LSSADKLIPQFTARVIERDENTGGRLLQFDLPINVSLLHLLHKLGEVPLPPYINNSHALE 182
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
YQT YAK G+VAAPTAGLHFT LL +L GI+ F+TLHVG GTF PV+VE
Sbjct: 183 ----EQYQTVYAKHDGAVAAPTAGLHFTPELLVKLRERGIEQEFLTLHVGVGTFRPVEVE 238
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H MH E + + + S K+ GGRI++VGTT +R LE + G + P++G
Sbjct: 239 DVTTHQMHEEWIEVSGDLVEKIYSTKNAGGRIIAVGTTVVRALEGSAQT-GSLQPYTGKV 297
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N+FI PGY++R V+ L++NFHLP+S+LLMLVS+ G E +Y+ AI+ YRFYS+GD
Sbjct: 298 NLFIYPGYQWRVVEGLITNFHLPRSSLLMLVSSLIGRERLLGIYKQAIASRYRFYSFGDA 357
Query: 354 SLLFQK 359
L+ +
Sbjct: 358 MLILPE 363
>gi|238787973|ref|ZP_04631769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
frederiksenii ATCC 33641]
gi|238723921|gb|EEQ15565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
frederiksenii ATCC 33641]
Length = 363
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 138/349 (39%), Positives = 202/349 (57%), Gaps = 17/349 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + +++ + +DL L D +V
Sbjct: 6 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTG---MLTHGIFTDLLDKLEPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 63 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDSRVLAHIKASKAPKPGTELLLGDD 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + ++ ++LVG +PLPPYI RP + D Y
Sbjct: 118 ES---IRATMLAR--HDTLFELRFDDERDVFTILNLVGHMPLPPYI--DRPDEDADRELY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 171 QTVYSQRPGAVAAPTAGLHFDEPLLAALRDKGIEMAFVTLHVGAGTFQPVRVDTIEEHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I+P+ G T IFI
Sbjct: 231 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAARASENGLISPFFGDTRIFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF
Sbjct: 291 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRF 339
>gi|329905131|ref|ZP_08274050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oxalobacteraceae bacterium IMCC9480]
gi|327547691|gb|EGF32476.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oxalobacteraceae bacterium IMCC9480]
Length = 341
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 140/355 (39%), Positives = 190/355 (53%), Gaps = 22/355 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP S IA P+ R ++RL+ + + D +D+ A L D +VFN
Sbjct: 4 LSDFDFDLPQSLIAQHPLAERSASRLLQLDGDTPV-----DRQFADIVALLTPGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+ G + ++ + + + R SK G I+ S
Sbjct: 59 DTRVLKARFFGNKQS-----GGKVEVLIERVLDARTVHAQIRSSKSPVAGSIVRL-SDAF 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ A + ++ I G +PLPPYI DA D YQT
Sbjct: 113 DVTVGARAGE--------FFTLTFPSDVFELIETYGRLPLPPYI--DHTADAFDETRYQT 162
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF LL +L GI+ FVTLHVGAGTF PV+ E +H MHS
Sbjct: 163 VYARTPGAVAAPTAGLHFDQALLDKLTEHGIRFAFVTLHVGAGTFQPVRTEVLAEHAMHS 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A T A+ + ++ G +V+VGTTSLR LE+A+ G + S T +FITPGYR
Sbjct: 223 EWYTLPAATVDAVRTTRAAGRDVVAVGTTSLRALESASQS-GELVAGSADTRLFITPGYR 281
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ V L++NFHLPKSTLLMLVSAF G + Y HAI+ YRF+SYGD L
Sbjct: 282 FKTVTRLITNFHLPKSTLLMLVSAFAGYPAIRAAYAHAIAQQYRFFSYGDAMFLT 336
>gi|167752308|ref|ZP_02424435.1| hypothetical protein ALIPUT_00552 [Alistipes putredinis DSM 17216]
gi|167660549|gb|EDS04679.1| hypothetical protein ALIPUT_00552 [Alistipes putredinis DSM 17216]
Length = 349
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 132/361 (36%), Positives = 189/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++ +D +A P RD +RLMVV+ I + ++ + + D +
Sbjct: 1 MKLSQYGYDFSADLLAKYPAENRDESRLMVVNRAKGT---IEHRIFKEIIEYFDEKDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + EI L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGAEIEIFLLRELNRELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E + + +G PLP + ++ D
Sbjct: 114 DDD---LLVAEVIDNTTSRGRTLRFLFDGSYEEFKETLFKLGETPLPK--WVREKVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A +G+VAAPTAG+HF+ +L R+ GI+ F+TLHVG G F V VED
Sbjct: 169 AERYQTIFASKEGAVAAPTAGMHFSKHLFKRMEIKGIEKAFITLHVGLGNFRTVDVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+D PTA+ +N K G +IVS+GTT +R LETA + G+I P G+TN F
Sbjct: 229 KHKMDSEQFFVDEPTAETVNKTKREGHKIVSIGTTVMRTLETAVSTGGMIKPMEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I Y F D +++NF LP ST LM+VSAF G + Y+ A YRF +YGD L+
Sbjct: 289 IFAPYEFSVADAMVTNFQLPYSTQLMMVSAFGGYDLIMNAYKIAKEEGYRFGTYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|297616934|ref|YP_003702093.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Syntrophothermus lipocalidus DSM 12680]
gi|297144771|gb|ADI01528.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Syntrophothermus lipocalidus DSM 12680]
Length = 344
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 138/352 (39%), Positives = 190/352 (53%), Gaps = 16/352 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ + + LPP +A PV PRD +RL+VV D L +L +V N
Sbjct: 6 LETYQYQLPPELVAQYPVQPRDHSRLLVVERET---KKFRDRYFFALAEYLGEKHVLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
T+VI +L G++ + L +V + W RP++ +K G ++ F
Sbjct: 63 ETRVIPVRLRGIKE-----TGAHVEILLLRKVGED-WQALVRPARRLKPGAVIQFTCGAK 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
++ + G ++ F + + G +PLPPYI RP +D YQT
Sbjct: 117 AEIIQ----ELGFAGGRVIRF-QGVSDWYGFLENEGEVPLPPYI--SRPPTEQDKETYQT 169
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA GS AAPTAGLHFT LL+RL G++V + LHVG GTF PV+ D H MH
Sbjct: 170 VYAARPGSAAAPTAGLHFTEQLLTRLTQQGVEVVKLLLHVGLGTFRPVESPDIRQHRMHQ 229
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A+ LN ++ G RIV+VGTT +R LE+A E P GFT+ +I PGYR
Sbjct: 230 EYYELGEQEAERLNDARAAGKRIVAVGTTVVRTLESAYEEKRGYVPRQGFTDCYIYPGYR 289
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FRAVD L++NFHLPKS+LLMLV AF GI+ T Y+HA+ + YRF+SYGD
Sbjct: 290 FRAVDQLITNFHLPKSSLLMLVCAFAGIDLTLAAYRHAVENRYRFFSYGDAM 341
>gi|212704033|ref|ZP_03312161.1| hypothetical protein DESPIG_02086 [Desulfovibrio piger ATCC 29098]
gi|212672538|gb|EEB33021.1| hypothetical protein DESPIG_02086 [Desulfovibrio piger ATCC 29098]
Length = 370
Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats.
Identities = 131/373 (35%), Positives = 197/373 (52%), Gaps = 33/373 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++ + +DLP +IA P R ++RL+ + N L + H+ SDLP L +V
Sbjct: 12 LLQNYTYDLPQEQIAQYPPEQRGASRLLTMRRN--GALDLEHHMFSDLPDCLPEGALLVA 69
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVS------------PNSWSV----YARP 105
NN++V+ A+L G R ++ L + ++WS R
Sbjct: 70 NNSRVLQARLLGSRS-----TGGKVEFLLLTPLPLVRAAATPVKGREDTWSAEVNGLVRS 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
+++G+ LHF + + T+++ G + G ++ + G IPLPPY
Sbjct: 125 GGSVREGETLHFGAG-----ISVTILECGTFGHRRVRMCWKG-DVADAFAATGHIPLPPY 178
Query: 166 IARKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
I R + YQT Y++ + GSVAAPTAGLHFT L L G + VTL+VG
Sbjct: 179 IKRSDAEEDFS--RYQTIYSREEKTGSVAAPTAGLHFTDELRETLRRRGFQWAEVTLYVG 236
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
GTF PV+ ED +H MH E + TA A+ K++ +++VGTTS+R LE
Sbjct: 237 YGTFSPVRCEDIRNHQMHREYVELPEETANAIAEAKAQHRPVIAVGTTSVRTLEGVAQVC 296
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G P++G+T+IF+ PG FR VD +++NFHLP+S+LLMLVSAF G + + YQ A+
Sbjct: 297 GRAQPFAGWTDIFLYPGRPFRVVDGIITNFHLPESSLLMLVSAFAGRKRILEAYQEAVKK 356
Query: 344 AYRFYSYGDTSLL 356
YRF+SYGD L+
Sbjct: 357 GYRFFSYGDAMLI 369
>gi|114331419|ref|YP_747641.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Nitrosomonas eutropha C91]
gi|122313768|sp|Q0AG56|QUEA_NITEC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114308433|gb|ABI59676.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Nitrosomonas eutropha C91]
Length = 346
Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 202/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ R +R++ ++ S + D DLPA+L D IV
Sbjct: 1 MKTDDFDFSLPNELIAQLPLANRADSRMLYIN---SRQSDLRDAAFKDLPAYLKQGDVIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L G + ++ + + + R S G L
Sbjct: 58 FNNTRVVKARLAGFKS-----TGGKVEVMIERILGTHQARALIRASHAPAIGSTL-LLEN 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++EA D + + I L + G PLPPYI R A D Y
Sbjct: 112 AITVQVEAREQDIYT------LRFIHSQPLIELLDQYGHTPLPPYI--GRIATASDESRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +L+ L ++GIK+ +VTLHVGAGTF PV+VE+ + HIM
Sbjct: 164 QTVFAQETGAVAAPTAGLHFDETMLTTLQTLGIKIAWVTLHVGAGTFQPVRVENINQHIM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E I T + + K+ GG +++VGTTSLR LE A DG + S TN+FITP
Sbjct: 224 HTEQYHIPTETIEIIRRCKAGGGSVLAVGTTSLRALEASALIGDGELVAGSNETNLFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G++FR VD L++NFHLP+STLLMLVSAF GIE + YQHA+++ YRF+SYGD L+
Sbjct: 284 GFQFRVVDRLLTNFHLPRSTLLMLVSAFAGIETIRHAYQHAVNNHYRFFSYGDAMLI 340
>gi|209520460|ref|ZP_03269220.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. H160]
gi|209499105|gb|EDZ99200.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. H160]
Length = 352
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 143/363 (39%), Positives = 201/363 (55%), Gaps = 22/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL--VISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V + + D ++LP + + D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLEVDTAGAADGAARLIDRRFTELPDCIAAGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + ++ + S S R SK + G +
Sbjct: 64 FNDTKVLKARFFGQKAS-----GGKVEVLVERLTSERSALAQIRASKSPQAGTTIRLAD- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ + L + I G +PLPPYI DA D Y
Sbjct: 118 ----AFDVTVGERVDQFYTLHF----PDDCLMLIEQYGRLPLPPYIEHD--PDATDETRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 168 QTVFAQNPGAVAAPTAGLHFDDGLLARLDAHGVERATLTLHVGAGTFQPVRVENLAEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE + A + + K+RG R+++VGTTS+R LE A + + S T+IF
Sbjct: 228 HSEWYHLPQALADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGHPLAAASAETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 288 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLL 347
Query: 357 FQK 359
++
Sbjct: 348 TRR 350
>gi|108761956|ref|YP_632860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Myxococcus
xanthus DK 1622]
gi|108465836|gb|ABF91021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Myxococcus
xanthus DK 1622]
Length = 371
Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats.
Identities = 145/367 (39%), Positives = 200/367 (54%), Gaps = 22/367 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++DF LP S+IA P+ RD++RLM + + S +DL L D +V
Sbjct: 13 RLSDYDFALPESQIAQAPLAERDASRLMTISRSSGTW---SHRRFADLQELLRPGDLLVL 69
Query: 62 NNTKVITAQLNGVRFCHINRREKEI----------SCTLHMRVSPNSWSVYARPSKVIKK 111
N+ +VI A+L G + R E + S L W + SK +K
Sbjct: 70 NDARVIPARLLGQKAGTGGRVELLVVRPAAQNTLTSAALGAAPESLDWVCLGQASKGLKP 129
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFS-ISGIELERQISLVGTIPLPPYIARKR 170
G + F S LEA + + GE + F G L + G +PLPPYI R
Sbjct: 130 GQRVMFASG-----LEAEIQEALGGGEYRVRFHAPPGASLAALLDAAGRLPLPPYIT--R 182
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
DA D YQT YA+ G+VAAPTAGLHFT L+ L + G+ VTL VG GTF+PV
Sbjct: 183 EPDAADAERYQTVYARASGAVAAPTAGLHFTQETLAALAARGVHRALVTLDVGPGTFLPV 242
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPW 289
+ +D D H MH E + TA+A+N+ ++ G R+V+VGTT +R LE+AT E G +
Sbjct: 243 REDDLDKHHMHPERYTVPEATAKAINAARAEGRRVVAVGTTVVRTLESATDPETGRLRAG 302
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T +FI PG+ FR VD+L++NFHLP+STL++LVSA G E T + Y A+ YRF+S
Sbjct: 303 PGETTLFIRPGFAFRQVDLLLTNFHLPRSTLVVLVSALLGRERTLEAYAEAVRAGYRFFS 362
Query: 350 YGDTSLL 356
YGD L+
Sbjct: 363 YGDAMLV 369
>gi|108804168|ref|YP_644105.1| queuosine biosynthesis protein [Rubrobacter xylanophilus DSM 9941]
gi|122381818|sp|Q1AWD5|QUEA_RUBXD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|108765411|gb|ABG04293.1| Queuosine biosynthesis protein [Rubrobacter xylanophilus DSM 9941]
Length = 334
Score = 362 bits (928), Expect = 6e-98, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 186/357 (52%), Gaps = 30/357 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M E D++LP IA RP PRD++RLMVV IS H+ +LP FL D +V
Sbjct: 1 MRTDELDYELPQELIAQRPAEPRDASRLMVVDVPSRG---ISHHVFRELPRFLGPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L R E+ +W ARPS+ ++ G L
Sbjct: 58 LNETKVIPARLFASR-----PGGGEVELLFLGERG-GAWEALARPSRRLRPGMPLSAGEG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V+++ G L+ G ++ + G +PLPPYI +A Y
Sbjct: 112 E-----RLEVVEELGEGRWLVR----GRDVPGLLERAGRMPLPPYIEPTPEAEAS----Y 158
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAG HFT +L + G ++ V LHVG GTF PV+ E +DH M
Sbjct: 159 QTVYARTPGSAAAPTAGFHFTGRVLRGVEEAGARIARVVLHVGLGTFAPVREERLEDHRM 218
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + TA+A+ + R+V+VGTT +R LE+ G + +FI PG
Sbjct: 219 HREYYAVPEETARAVEEAE----RVVAVGTTVVRTLESWARSGVR----EGESELFIYPG 270
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y +RAVD L++NFHLP+STLL LV +F G E ++ Y+ A+ YRFYS+GD LL
Sbjct: 271 YEWRAVDALITNFHLPRSTLLALVMSFAGRELVREAYEVAVRERYRFYSFGDAMLLL 327
>gi|189460198|ref|ZP_03008983.1| hypothetical protein BACCOP_00835 [Bacteroides coprocola DSM 17136]
gi|189433059|gb|EDV02044.1| hypothetical protein BACCOP_00835 [Bacteroides coprocola DSM 17136]
Length = 351
Score = 362 bits (928), Expect = 7e-98, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 190/363 (52%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPAKYRDESRLMVVHKATG---EIEHVVFKDILNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLPP+I RP + D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGEPPLPPFI--HRPAEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 169 EERFQTIFAKNEGAVTVPAAGLHFSRELMKRMEIKGIDFSFITMHCGLGGFRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F++A + +N K RG ++ +VGT +R +ETA DG + + G+TN F
Sbjct: 229 KHKMDSEQMFVEAEACRIVNEAKDRGNKVCAVGTDVMRAIETAVGTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P ST+LMLV ++ G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSLANAMVSNFHMPLSTMLMLVCSYGGYELVMDAYNIALKEDYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LDK 351
>gi|296122043|ref|YP_003629821.1| S-adenosylmethionine/tRNA-ribosyltransferase-isom erase
[Planctomyces limnophilus DSM 3776]
gi|296014383|gb|ADG67622.1| S-adenosylmethionine/tRNA-ribosyltransferase-isom erase
[Planctomyces limnophilus DSM 3776]
Length = 364
Score = 362 bits (928), Expect = 7e-98, Method: Composition-based stats.
Identities = 136/364 (37%), Positives = 196/364 (53%), Gaps = 18/364 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LPP IA P+ RD++R++V+H + +I + +LP FL +D IV N
Sbjct: 10 LSTYDYELPPELIAQHPLPERDASRMLVIHRSTG---MIEHRFIKELPLFLKPHDLIVVN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF---- 118
N+KV+ A+L GVR + + W + + + G+ +
Sbjct: 67 NSKVVPARLQGVRAS----TGGKWEGLFLGVTTSGEWQIIGQTRGRLVAGEWITIPVPAT 122
Query: 119 -----SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ S L+ +I++ G S I + G++PLPPYI + +
Sbjct: 123 HIENAASRQNSDLQLQLIERGEGGIWK-ASPQSEISTWDLLEQYGSMPLPPYI-HRDDEE 180
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D V YQT ++ QGSVAAPTAGLHFT L R + G K VTLHVG GTF PV E
Sbjct: 181 AEDRVRYQTIFSGPQGSVAAPTAGLHFTPALRDRCAASGAKFAEVTLHVGMGTFRPVSSE 240
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+H MH+E + AQ + S KS GGR++++GTTS R LE+A + G+ PW G T
Sbjct: 241 RIAEHQMHTETCELSEDVAQKIRSTKSEGGRVLAIGTTSARTLESAARKVGVGLPWQGET 300
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N+F+ P F V+ L++NFH+PKSTLLMLV A G + T + Y+ A+ YRF SYGD
Sbjct: 301 NLFLRPPCEFLQVEALLTNFHVPKSTLLMLVCAMAGYDLTMQAYKEAVEQRYRFLSYGDC 360
Query: 354 SLLF 357
L+
Sbjct: 361 MLIL 364
>gi|120601094|ref|YP_965494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris DP4]
gi|166216718|sp|A1V9F1|QUEA_DESVV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|120561323|gb|ABM27067.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris DP4]
Length = 371
Score = 362 bits (928), Expect = 7e-98, Method: Composition-based stats.
Identities = 139/371 (37%), Positives = 192/371 (51%), Gaps = 27/371 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++LP RIA P R +RL+V+ + +DL L +V
Sbjct: 11 LLSGYDYELPEDRIAQHPPVERGLSRLLVLDRTTGERI---HARFADLAEHLPEGALLVA 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMR----------VSPNSW----SVYARPSK 107
NN+KV+ A+L G R ++ + V P R SK
Sbjct: 68 NNSKVLPARLLGHRPTGGKVEFLLLTPLPLVTPLAAGPASGTVEPGWCVAEVEGLLRASK 127
Query: 108 VIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
++ GD L F L V+ K G +++ G EL + G +PLPPYI
Sbjct: 128 PLRPGDTLSFGDD-----LRVEVVHKGEFGRSMVLLFWRG-ELATLFAREGHLPLPPYIR 181
Query: 168 RKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
R + YQT +A+ GSVAAPTAGLHFT +L L + G + VTL+VG G
Sbjct: 182 RADGDED--RDRYQTVFAREDRLGSVAAPTAGLHFTPSLRETLTARGHQWAEVTLYVGYG 239
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TF PV+ D DH MH E + A T +A+ K+ G +V+VGTTS R+LE T G
Sbjct: 240 TFSPVRCADIRDHAMHREYVEVTAETVEAIRRAKADGRPVVAVGTTSCRVLEGVATAKGT 299
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ P++G+T+IF+ PGY F+ VD L++NFHLP+S+LLMLVSAF G E Y+ AI Y
Sbjct: 300 LEPYAGWTDIFMYPGYTFKVVDHLITNFHLPESSLLMLVSAFAGRERVLATYREAIEEGY 359
Query: 346 RFYSYGDTSLL 356
RF+SYGD LL
Sbjct: 360 RFFSYGDAMLL 370
>gi|188994433|ref|YP_001928685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
gi|188594113|dbj|BAG33088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
Length = 350
Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats.
Identities = 124/361 (34%), Positives = 184/361 (50%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +R+MVVH I + D+ + + D V
Sbjct: 1 MKLSKFKFNLPEELIALEPTKFRDESRMMVVHRRTG---EIEHRVFKDILEYFDKGDTFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNT+V A+L G + + +I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNNTRVFPARLYGNK----EKTGAQIEVFLLRELNERLKLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ + L A VID + L F G E + + +G PLP YI R ++ D
Sbjct: 114 NDE---ELVAEVIDNTTSRGRTLRFLYDGSHDEFKELLFQLGQTPLPKYI--DRDVNKED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ+ +A+++G+V AP A LHF+ L+ RL ++T+H G + + VED
Sbjct: 169 PERYQSIFAEVEGAVVAPAASLHFSRELMKRLEIKDCHFSYITVHHALGAYRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +I + +N +I +VGT+ LR LETA + DG + P+ G+TN F
Sbjct: 229 KHKMDSEEMYITEESCININRSWDEEKKICAVGTSILRALETAVSTDGHLKPFEGWTNRF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F L++NFH+P STLLM+ +AF G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYEFHLPSALVTNFHMPLSTLLMMTAAFGGHELIMNTYDLAVKEKYRFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|313109242|ref|ZP_07795210.1| LOW QUALITY PROTEIN: S-adenosylmethionine:trna
ribosyltransferase-isomerase [Pseudomonas aeruginosa
39016]
gi|310881712|gb|EFQ40306.1| LOW QUALITY PROTEIN: S-adenosylmethionine:trna
ribosyltransferase-isomerase [Pseudomonas aeruginosa
39016]
Length = 338
Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats.
Identities = 137/348 (39%), Positives = 191/348 (54%), Gaps = 20/348 (5%)
Query: 11 PPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQ 70
P + IA P+ R ++RL+ + ++ +DL +L D +VFNNT+VI A+
Sbjct: 2 PEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMVFNNTRVIPAR 58
Query: 71 LNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATV 130
L G + ++ + + + + R SK K G + L+
Sbjct: 59 LFGQKES-----GGKLEVLVERVLDQDRVLAHIRASKAPKPGMRILVEGGGSAEMLQ--- 110
Query: 131 IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGS 190
L + + VG +PLPPYI RP DA D YQT YA+ G+
Sbjct: 111 ------RHDALFELAFAEPVLPLLERVGHMPLPPYI--DRPDDAADRERYQTVYAQRAGA 162
Query: 191 VAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAP 250
VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+MH E +
Sbjct: 163 VAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVMHREWLEVGQD 222
Query: 251 TAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILM 310
A+++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG F VD L+
Sbjct: 223 VVDAVSACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPGRPFHVVDALV 281
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 282 TNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 329
>gi|134294796|ref|YP_001118531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia vietnamiensis G4]
gi|166216711|sp|A4JBP3|QUEA_BURVG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134137953|gb|ABO53696.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia vietnamiensis G4]
Length = 353
Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 194/361 (53%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V P + D ++LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPERTASRLLEVDG-TVAPARLVDRRFAELPSCIARGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 63 DTKVLKARFFGQKAS-----GGKIEVLVERVTGTHTALAQIRASKSPGAGTTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F + L I G +PLPPYI DA D YQT
Sbjct: 118 ------VTVGERVEPFFTLHFPQPCLTL---IEQYGRLPLPPYIEHD--ADATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSAEAAGRPLAATQDETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|332040561|gb|EGI76937.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Hylemonella gracilis ATCC 19624]
Length = 389
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 136/365 (37%), Positives = 196/365 (53%), Gaps = 15/365 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R ++RL+ + + D + +LP L D +VFN
Sbjct: 33 LSDFDFALPPELIAQHPAPERSASRLLD-GRDARPGALPVDRIFRELPGLLQPGDLLVFN 91
Query: 63 NTKVITAQLNGVRFC----HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+TKV+ A+L G + + ++ + ++ + + + SK G +L
Sbjct: 92 DTKVVKARLFGNKPAPARGATSPIGGKLELLIERVLTGHEVVAHMKVSKKPAVGTVLQMA 151
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
A ++ +W + L E + + G +PLPPYI D
Sbjct: 152 GG-----YTAELLGRWPDEDGQLFRLRFSDEPHKLMEQHGHVPLPPYINHSDNDDDVA-- 204
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A G+ AAPTA LHF +L+ L + G+K VTLHVGAGTF PVK E+ +H
Sbjct: 205 RYQTVFAAKPGAAAAPTAALHFDEAVLAALDARGVKRANVTLHVGAGTFSPVKTENLAEH 264
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW---SGFTNI 295
MH E + A T QA+ ++ GGRIV+VGTT++R LE+ G SG T+I
Sbjct: 265 RMHREWYDVPAATQQAIRDTQANGGRIVAVGTTTIRTLESWARSAGPGLSGGQTSGDTDI 324
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPG+ F+ D+L++NFHLPKSTL+MLVSAF G E +Y+HAI+ YRF+SYGD +
Sbjct: 325 FITPGFEFKVADLLITNFHLPKSTLMMLVSAFAGYEHIMALYRHAIAQRYRFFSYGDAMV 384
Query: 356 LFQKR 360
L + R
Sbjct: 385 LERVR 389
>gi|85860046|ref|YP_462248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Syntrophus
aciditrophicus SB]
gi|123517112|sp|Q2LVG6|QUEA_SYNAS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85723137|gb|ABC78080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Syntrophus
aciditrophicus SB]
Length = 362
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 135/374 (36%), Positives = 193/374 (51%), Gaps = 30/374 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP SRIA P RD AR+MV+ + + D P F+ D +V
Sbjct: 2 MKLQDFDYQLPQSRIAQSPCAKRDHARMMVLDRRIGS---LEHRHFYDFPDFVRKGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHIN---------------RREKEISCTLHMRVSPNSWSVYARP 105
N++KVI A+L+G + +W +P
Sbjct: 59 INDSKVIPARLSGRKETGSRIELLLLSRYSDSPAVPETDSTEWPFFRVGVEETWEALLKP 118
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
K I+ G + F ATVI++ N + LL F+ + + + + G PLPPY
Sbjct: 119 GKRIRIGTSIFF-----DDHSRATVIERINEKKWLLTFNTA-LPFDLFLQRYGKAPLPPY 172
Query: 166 I--ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
I +K D YQT YA+ GS+AAPTAG HF+ L L + I + VTLHVG
Sbjct: 173 IKREKKNAQMPEDRDRYQTIYARSPGSIAAPTAGFHFSEALFKTLRELEIVIAPVTLHVG 232
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
GTF P++ ED +DH+M E I ++ +N R+++VGTTS R+LE+A E
Sbjct: 233 FGTFTPIETEDVEDHVMEVESFSISPESSDKIN----SAERVIAVGTTSTRVLESAADEQ 288
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G ++P SG + +FI PGYRF+ V L++NFHLPKS+L +L AF G + ++ Y AI
Sbjct: 289 GRVHPMSGQSRLFIYPGYRFKRVQALLTNFHLPKSSLFLLACAFAGKDRIQQAYATAIQE 348
Query: 344 AYRFYSYGDTSLLF 357
YRFYSYGD L+
Sbjct: 349 EYRFYSYGDCMLII 362
>gi|189349447|ref|YP_001945075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
gi|221202260|ref|ZP_03575294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2M]
gi|221209150|ref|ZP_03582143.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2]
gi|189333469|dbj|BAG42539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
gi|221170968|gb|EEE03422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2]
gi|221177834|gb|EEE10247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2M]
Length = 355
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 197/361 (54%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P D ++LPA + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVD-ATAEPARFVDRRFAELPACIARGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + I + ++ R SK G L
Sbjct: 63 DTKVLKARFFGQKAS-----GGRIEVLIERVTGSHTALAQIRASKSPGAGTTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F +EL I G +PLPPYI DA D YQT
Sbjct: 118 ------VTVGERVEPFFTLHFPQPCLEL---IEQYGRLPLPPYIEHD--PDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL++L ++GI+ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDEPLLAKLDAMGIERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG++++VGTTS+R LE A + + T+IFIT
Sbjct: 227 EWYELPQSLVDKIAATRARGGKVIAVGTTSMRALEAAARDAEAAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLMMLVSAFAGIETIRAAYRHAIEQRYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|304321743|ref|YP_003855386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvularcula bermudensis HTCC2503]
gi|303300645|gb|ADM10244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvularcula bermudensis HTCC2503]
Length = 356
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 151/366 (41%), Positives = 202/366 (55%), Gaps = 20/366 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD+DLP +IAL P RD ARL++V PN L++ L +D ++
Sbjct: 1 MRVDLFDYDLPEEQIALVPPPERDGARLLIVPPN----GPFGHDLIAHLAEHFGPSDVLI 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISC--------TLHMRVSPNSWSVYARPSKVIKKG 112
N+TKVI A L G+R L R W + RP+K ++ G
Sbjct: 57 LNDTKVIPATLAGMRPARDVGGGDPAGVGIDITLLKCLEERDDGVRWQAFVRPAKRVRAG 116
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
D + + + E +L ++ + + GT+PLPPYIARKR +
Sbjct: 117 DDIEIGPVTA-------RVKRREGAEAVLHIPLTPSAFQSFLYDHGTMPLPPYIARKRAV 169
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT + K GSVAAPTAGLHFT LLS + G + VTLHVGAGTF+P+
Sbjct: 170 EVSDQDRYQTVFGKRPGSVAAPTAGLHFTDRLLSAIAERGATILRVTLHVGAGTFLPITA 229
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
D DH MHSE G + P A+ L + K+ G RI VGTT+LR++ETA G + ++G
Sbjct: 230 ADCTDHRMHSEWGEVSPPVAERLRAAKAGGERITCVGTTALRIVETAAQS-GEVQAFAGE 288
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPG+ F+ D L++NFHLP+STLLMLVSAF G E Y+ AI+ YRF+SYGD
Sbjct: 289 TDIFITPGFSFQCADRLLTNFHLPRSTLLMLVSAFSGRERILSAYREAINEGYRFFSYGD 348
Query: 353 TSLLFQ 358
LL +
Sbjct: 349 ACLLER 354
>gi|88803608|ref|ZP_01119133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Polaribacter irgensii 23-P]
gi|88780620|gb|EAR11800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Polaribacter irgensii 23-P]
Length = 349
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 127/361 (35%), Positives = 187/361 (51%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A+ P RD +RLMV++ I D+ + + D ++
Sbjct: 1 MKLSHFEFELPEELLAIYPAEHRDESRLMVLNKAAGT---IEHKQFKDVINYFDEGDVLM 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
N+TKV A++ G + + I L + W V P++ I+ G+ L F
Sbjct: 58 LNDTKVFPARMFGNK----EKTGARIEVFLLRELNAENRLWDVLVDPARKIRIGNKLFFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G ++ +G PLP A R ++ D
Sbjct: 114 EDDS---LVAEVIDNTTSRGRTLRFLFDGSYEAFRAKLLELGQTPLPK--AIAREVEPSD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAP+AGLHF+ +LL RL G+ +TLHVG GTF V+VED
Sbjct: 169 TERYQTIYAKNEGAVAAPSAGLHFSKHLLKRLEIKGVDFAKMTLHVGLGTFSAVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I TA +N K RI +VGTT +R +E++ + +N + G+TN F
Sbjct: 229 KHKMDSEQIVIPEKTAVMINKAKKEKRRICAVGTTVMRTVESSVSSKQELNAFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ P + F + +++NFHLPKSTLLM +AF G + + Y+ AI Y+F +YGD L+
Sbjct: 289 LFPPHEFSIANAMITNFHLPKSTLLMQAAAFGGYDFIMEAYKVAIKEGYKFSTYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|221214465|ref|ZP_03587436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD1]
gi|221165722|gb|EED98197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD1]
Length = 355
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 197/361 (54%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P D ++LPA + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVD-ATAEPARFVDRRFAELPACIARGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + I + ++ R SK G L
Sbjct: 63 DTKVLKARFFGQKAS-----GGRIEVLIERVTGSHTALAQIRASKSPGAGTTLRLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F +EL I G +PLPPYI DA D YQT
Sbjct: 118 ------VTVGERVEPFFTLHFPQPCLEL---IEQYGRLPLPPYIEHD--PDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL++L ++GI+ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDEPLLAKLDAMGIERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG++++VGTTS+R LE A + + T+IFIT
Sbjct: 227 EWYELPQSLVDKIAAARARGGKVIAVGTTSMRALEAAARDAEAAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLMMLVSAFAGIETIRAAYRHAIEQRYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|329963282|ref|ZP_08300995.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fluxus YIT 12057]
gi|328528821|gb|EGF55765.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fluxus YIT 12057]
Length = 352
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 122/363 (33%), Positives = 190/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RL+V+H I + D+ + + D V
Sbjct: 1 MKLSQFKFKLPEEKIALHPAKYRDESRLLVLHRKTG---EIEHRMFKDILDYFDDKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSI-VNRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE +++ + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVNSEAVKIVNHAKDINKQVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAMLI 349
Query: 357 FQK 359
+
Sbjct: 350 TDR 352
>gi|224023490|ref|ZP_03641856.1| hypothetical protein BACCOPRO_00192 [Bacteroides coprophilus DSM
18228]
gi|224016712|gb|EEF74724.1| hypothetical protein BACCOPRO_00192 [Bacteroides coprophilus DSM
18228]
Length = 351
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 190/363 (52%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPAKYRDESRLMVVHKSTG---EIEHVMFKDILNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLPP+I RP + D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGEPPLPPFI--HRPAEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 169 EERFQTIFAKNEGAVTVPAAGLHFSRELMKRMEIKGIDFAFITMHCGLGNFRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F++A + +N K RG ++ +VGTT +R +ETA DG + + G+TN F
Sbjct: 229 KHKMDSEQMFVNAEACRIVNEAKDRGNKVCAVGTTVMRTIETAVGTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNF +P ST+LML A+ G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVANAMVSNFQMPLSTMLMLKCAYGGYELIMDAYNIALKENYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LDK 351
>gi|46581752|ref|YP_012560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. Hildenborough]
gi|81566078|sp|Q725S3|QUEA_DESVH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|46451175|gb|AAS97820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. Hildenborough]
gi|311235379|gb|ADP88233.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio vulgaris RCH1]
Length = 371
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 138/371 (37%), Positives = 191/371 (51%), Gaps = 27/371 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++LP RIA P R +RL+V+ + +DL L +V
Sbjct: 11 LLSGYDYELPEDRIAQHPPVERGLSRLLVLDRTTGERI---HARFADLAEHLPEGALLVA 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMR----------VSPNSW----SVYARPSK 107
NN+KV+ A+L G R ++ + V P R SK
Sbjct: 68 NNSKVLPARLLGHRPTGGKVEFLLLTPLPLVTPLAAGPASGTVEPGWCVAEVEGLLRASK 127
Query: 108 VIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
++ GD L F L V+ K G +++ G EL + G +PLPPYI
Sbjct: 128 PLRPGDTLSFGDD-----LRVEVVHKGEFGRSMVLLFWRG-ELATLFAREGHLPLPPYIR 181
Query: 168 RKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
R + YQT +A+ GSVAAPTAGLHFT +L L + G + VTL+VG G
Sbjct: 182 RADGDED--RDRYQTVFAREDRLGSVAAPTAGLHFTPSLRETLTARGHQWAEVTLYVGYG 239
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TF PV+ D DH MH E + A T + + K+ G +V+VGTTS R+LE T G
Sbjct: 240 TFSPVRCADIRDHAMHREYVEVTAETVEVIRRAKADGRPVVAVGTTSCRVLEGVATAKGT 299
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ P++G+T+IF+ PGY F+ VD L++NFHLP+S+LLMLVSAF G E Y+ AI Y
Sbjct: 300 LEPYAGWTDIFMYPGYTFKVVDHLITNFHLPESSLLMLVSAFAGRERVLATYREAIEEGY 359
Query: 346 RFYSYGDTSLL 356
RF+SYGD LL
Sbjct: 360 RFFSYGDAMLL 370
>gi|33862496|ref|NP_894056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9313]
gi|46576943|sp|Q7V8V2|QUEA_PROMM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33640609|emb|CAE20398.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9313]
Length = 371
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 134/362 (37%), Positives = 188/362 (51%), Gaps = 12/362 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L P RIA PV PR SARL++V P P + V D L + D +V
Sbjct: 9 LLSSYDYPLDPERIAQLPVEPRHSARLLIVQPLGMKPPIARHAEVWDWQEELRAGDLLVI 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L R + W RP+K ++ GD L +
Sbjct: 69 NDTRVLKARLRVRRSG-----GGLAELLVLEPRGEGCWLCLGRPAKRLRPGDQLWLEALG 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + +G ++ F LE + G +PLPPYI R P D+
Sbjct: 124 EEPIALQVISKDSASGGRVVQFPSHYANAEQLELLLERYGEVPLPPYIQRHDPSDS---E 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + LL L G+ + VTLHVG GTF PV+ ED
Sbjct: 181 RYQTRYASRPGAVAAPTAGLHLSDELLEALKQRGVMLTSVTLHVGLGTFRPVETEDLSHL 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNIFI 297
+HSE + +A+ + ++R GR+++VGTTS+R LE A G + + G ++ I
Sbjct: 241 QLHSEWVEVRDDVVEAVMACRARAGRVIAVGTTSVRALEGAALAGGGFLQSFCGPVDLVI 300
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF VD L++NFHLPKS+LL+LVSA G E +Y AI H YRF+SYGD +
Sbjct: 301 QPGYRFAVVDGLLTNFHLPKSSLLLLVSAMVGRERLLALYAEAIEHQYRFFSYGDAMWID 360
Query: 358 QK 359
+
Sbjct: 361 PE 362
>gi|161525832|ref|YP_001580844.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
gi|160343261|gb|ABX16347.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
Length = 368
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 197/361 (54%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P D ++LPA + D +VFN
Sbjct: 17 LSDFDFNLPPELIAQTALPDRTASRLLEVD-ATAEPARFVDRRFAELPACIARGDLLVFN 75
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + I + ++ R SK G L
Sbjct: 76 DTKVLKARFFGQKAS-----GGRIEVLIERVTGSHTALAQIRASKSPGAGTTLRLADAFD 130
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F +EL I G +PLPPYI DA D YQT
Sbjct: 131 ------VTVGERVEPFFTLHFPQPCLEL---IEQYGRLPLPPYIEHD--PDATDETRYQT 179
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL++L ++GI+ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 180 VYASNPGAVAAPTAGLHFDEPLLAKLDAMGIERATLTLHVGAGTFQPVRVENIAEHKMHS 239
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG++++VGTTS+R LE A + + T+IFIT
Sbjct: 240 EWYELPQSLVDKIAATRARGGKVIAVGTTSMRALEAAARDAEAAGRPLAATQAETDIFIT 299
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL +
Sbjct: 300 PGYRFRVVDRLVTNFHLPKSTLMMLVSAFAGIETIRAAYRHAIEQRYRFFSYGDAMLLTR 359
Query: 359 K 359
+
Sbjct: 360 R 360
>gi|312795166|ref|YP_004028088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia rhizoxinica HKI 454]
gi|312166941|emb|CBW73944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
[Burkholderia rhizoxinica HKI 454]
Length = 359
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 193/360 (53%), Gaps = 24/360 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V P+ + D +LPA L D +VFN
Sbjct: 13 LSDFDFDLPPELIAQHALPERSASRLLEVTPS----GALLDRHFGELPACLEPGDLLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ +G++ + + P + R SK G +
Sbjct: 69 DTKVLKARFDGIKAS-----GGRVEVLIERVTGPRTALAQIRASKRPAPGSTIRLADAFD 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F IEL I G +PLPPYI D D YQT
Sbjct: 124 ------VTVGERVEPFHTLHFPHDCIEL---IDQHGRLPLPPYIEHT--PDTYDEARYQT 172
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTAGLHF + L+ L + G++ +TLHVGAGTF PV+ +D H MHS
Sbjct: 173 VFATTPGAVAAPTAGLHFDAPTLAALDARGVRRATLTLHVGAGTFQPVRTDDIAQHKMHS 232
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E I +A+ + ++ +++VGTTS+R LE A + ++ T+IFIT
Sbjct: 233 EWYNIPPALVEAIEATRAAKRSVIAVGTTSMRALEAAARDAERDGRELHAVRAETDIFIT 292
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY FR +D L++NFHLPKSTLLMLVSAF G+E ++ Y+HAI+ YRF+SYGD LL +
Sbjct: 293 PGYPFRVIDRLVTNFHLPKSTLLMLVSAFAGVEPIRRAYRHAIAQRYRFFSYGDAMLLTR 352
>gi|160884925|ref|ZP_02065928.1| hypothetical protein BACOVA_02915 [Bacteroides ovatus ATCC 8483]
gi|237716908|ref|ZP_04547389.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|237722117|ref|ZP_04552598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
gi|260172716|ref|ZP_05759128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
gi|262405676|ref|ZP_06082226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|293368622|ref|ZP_06615229.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CMC 3f]
gi|294644382|ref|ZP_06722145.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CC 2a]
gi|294810219|ref|ZP_06768884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
xylanisolvens SD CC 1b]
gi|299145177|ref|ZP_07038245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_23]
gi|315921006|ref|ZP_07917246.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156109960|gb|EDO11705.1| hypothetical protein BACOVA_02915 [Bacteroides ovatus ATCC 8483]
gi|229442891|gb|EEO48682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|229448986|gb|EEO54777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
gi|262356551|gb|EEZ05641.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|292636264|gb|EFF54749.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CMC 3f]
gi|292640217|gb|EFF58472.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CC 2a]
gi|294442576|gb|EFG11378.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
xylanisolvens SD CC 1b]
gi|295085896|emb|CBK67419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
xylanisolvens XB1A]
gi|298515668|gb|EFI39549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_23]
gi|313694881|gb|EFS31716.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 352
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 193/363 (53%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P+ RD +RLMV+H N I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPMKYRDESRLMVLHRNTG---KIEHKMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 PDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYSLGETPLPHSI-INRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ RL G+ ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKNEGAVTAPTASLHFSRELMKRLEIKGVDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F++ + +N K G + +VGTT +R +E+A + DG + + G+TN F
Sbjct: 230 KHKMDSEQMFVNEMAVKTVNRAKDNGRNVCAVGTTVMRAIESAVSTDGHLKEFEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYDQVMDAYHVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|255037016|ref|YP_003087637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dyadobacter
fermentans DSM 18053]
gi|254949772|gb|ACT94472.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Dyadobacter fermentans DSM 18053]
Length = 349
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 133/361 (36%), Positives = 188/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP S IAL P R +RLMVVH I +D+ + + D +
Sbjct: 1 MKLSEFKFDLPQSLIALHP-SDRGESRLMVVHRKTG---EIEHKTFADVINYFDDGDVMA 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + +I L + W V P++ I+ G+ L+F
Sbjct: 57 INDTKVFPARLYGQK----EKTGAKIEVFLLRELNREMRLWDVLVDPARKIRVGNKLYF- 111
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARD 176
G S L A VID + + F G + + +G PLPP I +R +++ D
Sbjct: 112 ---GDSDLVAEVIDNTTSRGRTIRFLYDGDNDAFMKLVDELGETPLPPEIISRRKVESAD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +A+ G+VAAPTAG+HFT ++ RL G+ VTLHVG GTF V VED
Sbjct: 169 RERFQTIFAEHVGAVAAPTAGMHFTKAIMKRLEIKGVSFAPVTLHVGLGTFRTVDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE I TA+ +N RI +VGTTSLR +E++ + G + P G+T+ F
Sbjct: 229 KHKTDSENYRITQSTAEVVNKAIDGKKRICAVGTTSLRAIESSVSASGHLKPVEGWTDKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ P Y F+ + L+SNF LP+S LLM AF G + K Y AI Y+F++YGD L+
Sbjct: 289 VFPPYDFKIANALLSNFQLPESILLMAACAFGGFDLVMKAYDIAIKEKYKFFTYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|189464705|ref|ZP_03013490.1| hypothetical protein BACINT_01049 [Bacteroides intestinalis DSM
17393]
gi|189436979|gb|EDV05964.1| hypothetical protein BACINT_01049 [Bacteroides intestinalis DSM
17393]
Length = 352
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 124/363 (34%), Positives = 188/363 (51%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHRKTG---EIEHKEFKDVLNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSI-INRPVEPDD 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE ++ +N K ++ +VGTT +R +E+ + DG + P+ G+TN F
Sbjct: 230 KHKTDSEQMVVNEEAVSIVNRAKDMNRQVCAVGTTVMRAIESTVSTDGHLKPYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMISNFHMPLSTLLMIVAAFGGYDQVMEAYNVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 TDK 352
>gi|53711349|ref|YP_097341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
gi|60679666|ref|YP_209810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis NCTC 9343]
gi|253564545|ref|ZP_04842002.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
gi|265764793|ref|ZP_06093068.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
gi|81317260|sp|Q5LJ28|QUEA_BACFN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81384013|sp|Q650L7|QUEA_BACFR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52214214|dbj|BAD46807.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
gi|60491100|emb|CAH05848.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis NCTC 9343]
gi|251948321|gb|EES88603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
gi|263254177|gb|EEZ25611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
gi|301161131|emb|CBW20669.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis 638R]
Length = 352
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 126/363 (34%), Positives = 189/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D V
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHKRTG---EIEHKMFKDILNYFDDKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP + RP++ D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLP-HTILNRPVEEED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+ + +N K G + +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKMDSEQMFVTEEAVKIVNRAKDLGKNVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYDQVMDAYHIALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|298483291|ref|ZP_07001470.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
gi|298270608|gb|EFI12190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
Length = 352
Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 193/363 (53%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P+ RD +RLMV+H N I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPMKYRDESRLMVLHRNTG---KIEHKMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 PDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYSLGETPLPHSI-INRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F++ + +N K G + +VGTT +R +E+A + DG + + G+TN F
Sbjct: 230 KHKMDSEQMFVNEMAVKTVNRAKDNGRNVCAVGTTVMRAIESAVSTDGHLKEFEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYDQVMDAYHVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|167571173|ref|ZP_02364047.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia oklahomensis C6786]
Length = 351
Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats.
Identities = 142/361 (39%), Positives = 199/361 (55%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVD-NTSEPPRLVDRRFAELPACVAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + I + + R SK G L
Sbjct: 63 DTKVLKARFFGHKAS-----GGRIEVLIERVTGARTALAQIRASKRPAPGTTLTLAD--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ATV ++ L + I G +PLPPYI DA D YQT
Sbjct: 115 --AFDATVGERVEPFFTLHF----PEDCLGLIERYGRLPLPPYIEHT--PDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 167 VFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENLAEHKMHR 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + + ++RGGR+++VGTTS+R LE A + ++ T+IFIT
Sbjct: 227 EWYELTGALVEKIAATRARGGRVIAVGTTSMRALEAAARDAEAAGRPLSATRAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI+ YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIAARYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|114797801|ref|YP_761436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hyphomonas
neptunium ATCC 15444]
gi|123322972|sp|Q0BYK7|QUEA_HYPNA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114737975|gb|ABI76100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hyphomonas
neptunium ATCC 15444]
Length = 351
Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats.
Identities = 158/360 (43%), Positives = 207/360 (57%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP IALRP P+D+ARL+VVH + + D V DLP +LN+ D +V
Sbjct: 1 MDLSVFQFDLPEDLIALRPAQPQDAARLLVVHGDGR----LIDATVRDLPKYLNTGDVLV 56
Query: 61 FNNTKVITAQLNGVRF-CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
FN+T+V+ A L GVR R+ E+ L R W ARP + +K GD + F
Sbjct: 57 FNDTRVLPAALKGVRPARDGASRDVEVDVNLVERQGDCLWLALARPGRRLKDGDEIFFAE 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
A + + GEILL F+ G + + G +PLPPYIAR+RP DA D
Sbjct: 117 G-----FSARIASRREGGEILLDFNCEGEAMIAALDAHGAMPLPPYIARRRPADAEDRET 171
Query: 180 YQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A + SVAAPTAGLHFT LL+ + + G+K V LHVG GTF P++ ++
Sbjct: 172 YQTRFAGEDAASVAAPTAGLHFTPRLLAEVEAAGLKRETVRLHVGLGTFKPLEDRHLSEN 231
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+H E I A LN+ ++ G R+V VGTT++R LE+ EDG I+ +G T+IF+
Sbjct: 232 RLHEEWRRITPEVADRLNAARAAGARLVPVGTTAMRTLESCAGEDGQIHAATGPTDIFLK 291
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG RA D LM+NFHLP S+L MLVSA G + Y HAI YRFYSYGD LL
Sbjct: 292 PGDPVRATDALMTNFHLPGSSLFMLVSALMGTSLMRAAYAHAIEEKYRFYSYGDACLLLP 351
>gi|167580652|ref|ZP_02373526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis TXDOH]
gi|167618756|ref|ZP_02387387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis Bt4]
gi|257137994|ref|ZP_05586256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis E264]
Length = 357
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 197/361 (54%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVD-NASAPPRLVDRRFAELPACVAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + + R SK G L
Sbjct: 63 DTKVLKARFFGRKAS-----GGKIEVLIERVTGQRTALAQIRASKSPAPGTTLTLAD--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L + I G +PLPPYI DA D YQT
Sbjct: 115 --AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHT--PDATDEARYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 167 VFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENIAEHRMHR 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + + ++RGGR+++VGTTS+R LE A + + T+IFIT
Sbjct: 227 ESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDADAAGRPLAATRAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIDARYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|29348623|ref|NP_812126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|253569034|ref|ZP_04846444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
gi|298386991|ref|ZP_06996545.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
gi|29340528|gb|AAO78320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|251841053|gb|EES69134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
gi|298260141|gb|EFI03011.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
Length = 352
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 192/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPTKYRDESRLMVLHRRTG---EIEHKMFKDVLNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 ADDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSI-INRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFAKNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ++A +N K +G + +VGTT +R +E+A + DG + + G+TN F
Sbjct: 230 KHKMDSEQMIVNAEAVNTVNRAKDKGKNVCAVGTTVMRAIESAVSTDGHLKEFEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYEQVMDAYHVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|255693344|ref|ZP_05417019.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
finegoldii DSM 17565]
gi|260620920|gb|EEX43791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
finegoldii DSM 17565]
Length = 352
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 192/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H N I + ++ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPTKYRDESRLMVLHRNTG---KIEHKMFKEVLEYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP + RP++ D
Sbjct: 114 PDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYELGETPLP-HTIINRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ RL G+ ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKKEGAVTAPTASLHFSRELMKRLEIKGVDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+D + +N K G + +VGTT +R +E+A + DG + + G+TN F
Sbjct: 230 KHKMDSEQMFVDEAAVKTVNRAKDNGKNVCAVGTTVIRAIESAVSTDGHLKEFEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYEQVMDAYHVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|153807129|ref|ZP_01959797.1| hypothetical protein BACCAC_01406 [Bacteroides caccae ATCC 43185]
gi|149130249|gb|EDM21459.1| hypothetical protein BACCAC_01406 [Bacteroides caccae ATCC 43185]
Length = 352
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 191/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H N I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPTKYRDESRLMVLHRNTG---KIEHRMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 PDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSI-INRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKKEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +D + +N K G + +VGTT +R +E+A + DG + + G+TN F
Sbjct: 230 KHKMDSEQMLVDEAAVKTVNRAKDTGRNVCAVGTTVMRAIESAVSTDGHLKEFEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYEQVMDAYHVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|304413742|ref|ZP_07395186.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Candidatus Regiella insecticola LSR1]
gi|304283833|gb|EFL92227.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Candidatus Regiella insecticola LSR1]
Length = 413
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 133/411 (32%), Positives = 196/411 (47%), Gaps = 64/411 (15%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + I+ + +D+ L + D +V
Sbjct: 1 MRVDDFSFELPGSLIAHYPHTQRSGCRLLSLDGQNGN---ITHGVFTDVLDKLQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNDTRVIPARLFGKKAS-----GGKLEILVERLLDKHRVLAHIKASKAPKPGTQLQLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + L F ++ + +G IPLPPYI + D Y
Sbjct: 113 KSEHTAIQATVLARLDNLFELRFDDQ-RDVLTILRAIGHIPLPPYIDSP--DEKSDRELY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L GI++ FVTLHVGAGTF P++V++ ++H M
Sbjct: 170 QTVYSQRPGAVAAPTAGLHFDQPLLDALRKKGIEMAFVTLHVGAGTFQPIRVKNIEEHSM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-------------------- 280
H+E + +A+ + K+RG R+++VGTTS+R LE+A
Sbjct: 230 HAEYAEVPQTVVEAVLACKARGKRVIAVGTTSVRSLESAAMQRAEKNENIPFAFEAAALL 289
Query: 281 ---------------------------------TEDGIINPWSGFTNIFITPGYRFRAVD 307
+ +I P+ G T IFI PGY ++ VD
Sbjct: 290 AADIRPNHVVDLRSSGRTPWPPSGNFKDCGYNPGSNALIMPFFGDTRIFIYPGYHYQIVD 349
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
L++NFHLPKSTL+MLV+AF G + T YQ AI YRF+SYGD + +
Sbjct: 350 GLITNFHLPKSTLIMLVAAFAGYKNTMAAYQLAIEKEYRFFSYGDAMFISR 400
>gi|167586186|ref|ZP_02378574.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia ubonensis Bu]
Length = 354
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 196/361 (54%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA + R ++RL+ V N P + D ++LP+ + + D +VFN
Sbjct: 4 LSDFDFHLPPELIAQTALPDRTASRLLEVD-NTVAPARLVDRRFAELPSCIAAGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + ++ + ++ R SK G L
Sbjct: 63 DTKVLKARFFGHKAS-----GGKVEVLIERVTGTHTALAQIRASKSPGPGTTLTLADAFD 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + L F + L I G +PLPPYI DA D YQT
Sbjct: 118 ------VTVGERVEPFFTLHFPAPCLTL---IEQYGRLPLPPYIEHD--PDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL++L ++G++ +TLHVGAGTF PV+V++ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDEPLLAKLDAMGVERATLTLHVGAGTFQPVRVDNLAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + + T+IFIT
Sbjct: 227 EWYELPQSLVDRIAATRARGGNVIAVGTTSMRALEAAARDADAAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYAFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|255010308|ref|ZP_05282434.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
gi|313148106|ref|ZP_07810299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
gi|313136873|gb|EFR54233.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
Length = 352
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 127/363 (34%), Positives = 189/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D V
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHKRTG---EIEHKMFKDILNYFDDKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP + RP++ D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLP-HTILNRPVEEED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+ + +N K G + +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKMDSEQMFVTGEAVKIVNRAKDLGRNVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMDAYHIALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|94676614|ref|YP_589023.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|166216701|sp|Q1LSP1|QUEA_BAUCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|94219764|gb|ABF13923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 353
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 202/363 (55%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P+ R + RL+ + + I ++ +D+ L+ D +V
Sbjct: 1 MHVADFSFNLPKNLIARYPLPERSTCRLLSLDGHSGA---IKHNVFTDILDQLSLGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K +L
Sbjct: 58 FNNTRVIPARLFGRKIS-----GGKVEVLVERVLDNQRVLAHIRASKTPKIDTLLLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + LL ++ ++ G IPLP Y+ RP + D Y
Sbjct: 113 E---NIRAIIVARHQIWFELLFDDQR--DILTILNDAGHIPLPYYL--DRPDYSLDRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G++AAPTAGLHF LLS L G+++ F+TLHVG GTF P+KV+ + H M
Sbjct: 166 QTVYSQHPGAIAAPTAGLHFDQQLLSALRVKGVEMVFITLHVGTGTFQPIKVKKIEHHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-----TEDGIINPWSGFTNI 295
+SE + A+ + KSRG R+V+VGTTS+R LE+A ++ ++ P+ G T+I
Sbjct: 226 YSEYTEVPHTVVDAVIACKSRGNRVVAVGTTSVRSLESAIVSVSNSKHTMLAPFCGETSI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYRFR +D L++NFHLP+ST +MLVSAF G + T Y+ A++ AYRF SYGD
Sbjct: 286 FIYPGYRFRVIDALITNFHLPQSTPIMLVSAFAGYQHTFNAYREAVNLAYRFLSYGDAMF 345
Query: 356 LFQ 358
+
Sbjct: 346 ITN 348
>gi|256830483|ref|YP_003159211.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfomicrobium baculatum DSM 4028]
gi|256579659|gb|ACU90795.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfomicrobium baculatum DSM 4028]
Length = 361
Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats.
Identities = 131/369 (35%), Positives = 202/369 (54%), Gaps = 31/369 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +DFDLP ++IA P R ++RL+V+ + D + +D+P L + +V
Sbjct: 9 NLQSYDFDLPEAQIAQDPTAKRGASRLLVLDRKSGT---VRDAMFADIPELLPTGALLVV 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV------------SPNSWSVYARPSKVI 109
NNTKV+ A+L G + ++ L + + + SK
Sbjct: 66 NNTKVLPARLIGRKES-----GGKVEFLLLTPLTLIEAKTAADGTKTATAEGLLKASKGP 120
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
++GD+L F +E V++K G + +G +L G IPLPPYI
Sbjct: 121 RQGDLLLFPG------IELRVLEKGEFGRARVTLRWTG-DLAEHFLSQGHIPLPPYI--H 171
Query: 170 RPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y++ GSVAAPTAGLHFT +++ L GI++ VTL+VG GTF
Sbjct: 172 REDKSEDRTRYQTVYSREDKLGSVAAPTAGLHFTPEIMASLAQQGIQLAEVTLYVGYGTF 231
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
PV+ +D +H+MH+E + TA+A+ KS G +++VGTT+ R LE+ + G I
Sbjct: 232 SPVRCDDIREHVMHAEYAEVPEETARAIAKAKSEGRPVIAVGTTTSRTLESMASALGEIG 291
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+ G+T+IFI PGY F+ VD L++NFHLP+S+L+++V G ++ Y HAI +RF
Sbjct: 292 PFKGWTDIFIHPGYEFKVVDQLITNFHLPRSSLIIMVCTLAGRQQIIDAYNHAIKQGFRF 351
Query: 348 YSYGDTSLL 356
+SYGD L+
Sbjct: 352 FSYGDAMLI 360
>gi|83720404|ref|YP_441826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis E264]
gi|83654229|gb|ABC38292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis E264]
Length = 374
Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 197/361 (54%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VFN
Sbjct: 21 LSDFDFDLPPELIAQTALPERSASRLLEVD-NASAPPRLVDRRFAELPACVAPGDLLVFN 79
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + + R SK G L
Sbjct: 80 DTKVLKARFFGRKAS-----GGKIEVLIERVTGQRTALAQIRASKSPAPGTTLTLAD--- 131
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L + I G +PLPPYI DA D YQT
Sbjct: 132 --AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHT--PDATDEARYQT 183
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 184 VFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENIAEHRMHR 243
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFIT 298
E + + + + ++RGGR+++VGTTS+R LE A + + T+IFIT
Sbjct: 244 ESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDADAAGRPLAATRAETDIFIT 303
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI YRF+SYGD LL +
Sbjct: 304 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIDARYRFFSYGDAMLLTR 363
Query: 359 K 359
+
Sbjct: 364 R 364
>gi|124023814|ref|YP_001018121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9303]
gi|166216737|sp|A2CBJ6|QUEA_PROM3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123964100|gb|ABM78856.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9303]
Length = 371
Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats.
Identities = 132/361 (36%), Positives = 185/361 (51%), Gaps = 12/361 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L P RIA PV PR +ARL++V P P + V D L + D +V
Sbjct: 9 LLSSYDYPLDPERIAQLPVEPRHAARLLIVQPLGMKPPIARHAEVWDWQEELRAGDLLVI 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L R + W RP+K ++ GD L +
Sbjct: 69 NDTRVLKARLRVRRSG-----GGLAELLVLEPRGEGRWLCLGRPAKRLRPGDQLWLEALG 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + +G ++ F LE + G +PLPPYI P D+
Sbjct: 124 EEPIALQVISKDSASGGRVVQFPSHYANAEQLELLLERYGEVPLPPYIKCHDPSDS---E 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + LL L G+ + VTLHVG GTF PV+ ED
Sbjct: 181 RYQTRYASRPGAVAAPTAGLHLSDELLEALKQRGVMLTSVTLHVGLGTFRPVETEDLRHL 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNIFI 297
+HSE + A+ + ++R GR+++VGTTS+R LE A G + + G ++ I
Sbjct: 241 QLHSEWVEVRDEVVAAVMACRARAGRVIAVGTTSVRALEGAALAGGGFLQSFCGPVDLVI 300
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF VD L++NFHLPKS+LL+LVSA G E +Y AI H YRF+SYGD +
Sbjct: 301 QPGYRFAVVDGLLTNFHLPKSSLLLLVSAMVGRERLLALYAEAIEHHYRFFSYGDAMWID 360
Query: 358 Q 358
Sbjct: 361 P 361
>gi|323699683|ref|ZP_08111595.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio sp. ND132]
gi|323459615|gb|EGB15480.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio desulfuricans ND132]
Length = 360
Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 188/363 (51%), Gaps = 19/363 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+ LP RIA P RD +RL+V+ ++ +DL +L + +V
Sbjct: 8 RLSSYDYPLPEDRIAQEPAARRDGSRLLVLDR---AARSLTPARFTDLLDYLPDDCLLVA 64
Query: 62 NNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSV-----YARPSKVIKKGDIL 115
NN++VI A++ G + L + W R SK K G +
Sbjct: 65 NNSRVIPARVFGRKPTGGQVEFLLLTPLPLLTPEERDGWLTVRAEGLLRASKGPKPGATV 124
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F + LEA G + G +L + +G +PLPPYI RP
Sbjct: 125 TFADDFSLTALEA-----GEFGRWQVELRWKG-DLTALFNSLGHLPLPPYIK--RPDVEA 176
Query: 176 DYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQTTYA GSVAAPTAGLHFT L R+ + GI+ VTL+VG GTF PV+
Sbjct: 177 DRERYQTTYADRSKTGSVAAPTAGLHFTPELRERIRAKGIQWAEVTLYVGYGTFSPVRCP 236
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D DH MH+E + TA+A+ K+ G +++VGTTS R LE E G I + G T
Sbjct: 237 DIRDHRMHAEYIEVSEETAEAVRGAKAEGRPVIAVGTTSARTLEGMVREAGSIRQFRGET 296
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI+PGY F+ +D +++NFHLP+S+L++++SA G + Y A+ + +RF+SYGD
Sbjct: 297 DIFISPGYTFKVIDGILTNFHLPESSLIIMISALAGRKTILDAYAFALENDFRFFSYGDA 356
Query: 354 SLL 356
L+
Sbjct: 357 MLI 359
>gi|89054208|ref|YP_509659.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Jannaschia
sp. CCS1]
gi|122498901|sp|Q28RM8|QUEA_JANSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|88863757|gb|ABD54634.1| Queuosine biosynthesis protein [Jannaschia sp. CCS1]
Length = 355
Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats.
Identities = 161/349 (46%), Positives = 214/349 (61%), Gaps = 15/349 (4%)
Query: 14 RIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNG 73
IA RP PR SARL+V D V+DLP+ L D +V N+T+VI A+L G
Sbjct: 14 LIATRPARPRSSARLLVADG-----PETHDLTVADLPSMLRRGDRLVLNDTRVIPARLTG 68
Query: 74 VRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVI 131
R + E I TL + +WS A+P + +K G+ + F +
Sbjct: 69 TRTRMSAQGEVTARIEVTLMEPQADGTWSALAKPMRKLKAGEKIIFSNALQADV------ 122
Query: 132 DKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSV 191
+ L F++ G + + ++ G +PLPPYIA KR DARDY DYQT +AK G+V
Sbjct: 123 -HAMDEGLRLAFNVEGDDFDAALNAAGAMPLPPYIAGKRAPDARDYHDYQTIWAKRAGAV 181
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPT 251
AAPTA LHF +L+ L S G+ V FVTLHVGAGTF+PV V+D H MH+E G + A
Sbjct: 182 AAPTASLHFDEHLMDALTSRGVDVTFVTLHVGAGTFLPVTVDDVTTHKMHAEWGEVRATA 241
Query: 252 AQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMS 311
A +N+ K+ GGRI+ VGTT+LRL+E+A +DG I+P+ G T+IFI PGYR++ D LM+
Sbjct: 242 AAEINATKAAGGRIIPVGTTALRLIESAA-QDGTIHPFEGTTDIFIYPGYRWQITDALMT 300
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
NFHLPKSTLLMLVSA G + +Y HAI++ YRF+SYGD SLLF +
Sbjct: 301 NFHLPKSTLLMLVSALMGKDRMDAVYAHAIANQYRFFSYGDASLLFPSQ 349
>gi|330991057|ref|ZP_08315011.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter sp. SXCC-1]
gi|329761878|gb|EGG78368.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter sp. SXCC-1]
Length = 397
Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats.
Identities = 168/357 (47%), Positives = 221/357 (61%), Gaps = 14/357 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +FDF LPP RIA P PRDSARL+ V I D V DLP L + D +V
Sbjct: 49 LVSDFDFTLPPDRIADHPARPRDSARLLDVP----VAGPIMDRHVRDLPGCLRAGDILVA 104
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL+ R I TL + SW V AR ++ + GD L F
Sbjct: 105 NDTAVIPAQLSATRGA------ARIGITLDRILPDGSWHVLARNARRLHPGDTLAF---- 154
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G S + A V+ + G++ L FS+ G ++ + G + LPPYIAR +D DY
Sbjct: 155 GASPVTADVLACGDAGDVTLRFSVEGAAFDQFLHDTGHLALPPYIARPEGPTEQDRKDYA 214
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ +G+VAAPTAGLHFT +LL+ L G+ +TLHVGAGTF+P++ E H MH
Sbjct: 215 TIFAQHRGAVAAPTAGLHFTPDLLAALDHAGVLRQTLTLHVGAGTFLPMRSEQISAHRMH 274
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A+ +N+ ++ GGRI++VGTTSLRLLE+AT EDG+++P+ G T IFI PGY
Sbjct: 275 AERGTITPHAARRINAARAAGGRIIAVGTTSLRLLESATDEDGVVHPFHGETAIFIKPGY 334
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RFRAVD+L++NFHLP+STL MLV AF G + Y HAI+ YRFYSYGD LL +
Sbjct: 335 RFRAVDMLLTNFHLPRSTLFMLVCAFGGYRRMQAAYAHAIAKGYRFYSYGDACLLHR 391
>gi|312129239|ref|YP_003996579.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
gi|311905785|gb|ADQ16226.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
Length = 350
Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats.
Identities = 125/362 (34%), Positives = 188/362 (51%), Gaps = 17/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP S IA P RD AR+MV+H I D+ + D +V
Sbjct: 1 MKLSSFKFDLPDSLIAQHPYEDRDGARMMVLHRKTG---KIEHKQFRDIIEYFGDGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + +I L + W V P++ I+ G+ L+F
Sbjct: 58 ANDTKVFPARLYGSK----EKTGAKIEVFLLRELNREMRLWDVLVDPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L A VID + I +F + E+ + I +G P+P I ++ D D
Sbjct: 113 ---GDSDLVAEVIDNTTSRGRTIRFLFDGNHEEMMQAIYELGETPIPKDILQREVAD-YD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+VAAP AG+HFT N++ R+ G+ +TLH+G GTF V+VED
Sbjct: 169 EERFQTIFAKNEGAVAAPIAGIHFTKNIVRRMEINGVDFAPLTLHIGIGTFRQVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS-GFTNI 295
H SE FI T +N R+ ++G+TSLR +E++ + + + P +T+
Sbjct: 229 KHKTDSENFFIPEATCNIVNRALDENKRVCAIGSTSLRAMESSVSANNRLKPLDNAWTDK 288
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P + F+ + L++NFHLP+S LLM AF G + + YQ AI Y+F++YGD L
Sbjct: 289 FIFPPFDFKIANALLTNFHLPESILLMTTCAFGGYDTVMEAYQVAIKEKYKFFTYGDAML 348
Query: 356 LF 357
+
Sbjct: 349 II 350
>gi|257790735|ref|YP_003181341.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Eggerthella lenta DSM 2243]
gi|257474632|gb|ACV54952.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Eggerthella lenta DSM 2243]
Length = 361
Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats.
Identities = 131/371 (35%), Positives = 187/371 (50%), Gaps = 26/371 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLPP IA P RD RL+V+ I D + D+ +L ND ++
Sbjct: 1 MKTSDFDYDLPPELIAQEPAAERDGCRLLVMDRATGA---IEDRIFRDIADYLRPNDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--------WSVYARPSKVIKKG 112
N T+V+ A+L G + L V W V RP K +K G
Sbjct: 58 ANETRVMPARLLGAK----RGTGGSAEVFLLREVRDREPRTNQSALWEVLVRPGKRLKPG 113
Query: 113 D--ILHFFSQDGQSRLEATVIDKW---NTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
++ F G+ L ++D GE L + L+ + VG PLPPYI
Sbjct: 114 TGAVVDFVDARGEVALSTEIVDWAENAQKGERLARLTTPLPSLDEALHAVGHTPLPPYIK 173
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
+ YQT Y++ + S AAPTAGLHFT L+ RL G++ V L VG TF
Sbjct: 174 NYAGDEEL----YQTVYSRRESSAAAPTAGLHFTPALIERLREQGVRWETVELEVGLDTF 229
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGII 286
V +D + H++H+E + TA A+ + RGGR+++VGTTS+R LE+A E G +
Sbjct: 230 RIVDEDDPEQHVIHTEYYTVPERTADAIAETRERGGRVIAVGTTSVRSLESAWDAEAGAV 289
Query: 287 NPWSGFT-NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
P T ++++ PG +F VD L++NFH+P+STL+MLVSAF E Y+HAI Y
Sbjct: 290 TPRDRETTSLYLLPGSQFHVVDALITNFHVPRSTLMMLVSAFSTREHIMAAYRHAIEERY 349
Query: 346 RFYSYGDTSLL 356
R S+GD +
Sbjct: 350 RMLSFGDAMFI 360
>gi|85705247|ref|ZP_01036346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. 217]
gi|85670120|gb|EAQ24982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. 217]
Length = 362
Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats.
Identities = 159/360 (44%), Positives = 218/360 (60%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL+V I+D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRRAARLLVAEG-----AAITDAGVADLGRWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R +I TL + +W +P K + G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRSGAQGDTAAKIEVTLLEPGAEGTWGALIKPLKKVSVGEEIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A ++ G+ L F++ + + ++ G +PLPPYIA +RP D +D V
Sbjct: 116 E-----RLSAV-LEAKEEGQGRLRFNLRAEDFDAALAEAGAMPLPPYIAARRPADDQDKV 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L ++G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARAPGAVAAPTASLHFDEALLAELAAMGVGFTHVTLHVGAGTFLPVKVEDVTSH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + ++ GGRI+ VGTT+LRL+ETA G I WSG T+IFI
Sbjct: 230 KMHAEWGEVSEEAAAEIAATRAAGGRIIPVGTTALRLIETAARATGEIAAWSGDTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G ++Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVTDALMTNFHLPKSTLMMLVSALMGQGVIDRIYAHAVARGYRFFSYGDASLLIP 349
>gi|257455334|ref|ZP_05620569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enhydrobacter aerosaccus SK60]
gi|257447296|gb|EEV22304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enhydrobacter aerosaccus SK60]
Length = 357
Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats.
Identities = 146/363 (40%), Positives = 194/363 (53%), Gaps = 23/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LP IA P+ R ++RL+ + D DLP LNS D +VFN
Sbjct: 5 LDDFDYQLPDELIARYPLAVRSASRLLYLP----AHGQPKDQQFVDLPELLNSGDLVVFN 60
Query: 63 NTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
+TKV+ A+L G + + I ++ + R S+ K+G L
Sbjct: 61 DTKVMKARLFGQKASGGAVEVLVERILPDNATSNQKHTALCHVRASRSPKEGQTLSLADG 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + LL F + + G +P+PPY R D D Y
Sbjct: 121 NIHATVMGRE-----DNLFLLEFDQP---ILPVLEHYGELPIPPYFE--RHADDNDETRY 170
Query: 181 QTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + SVAAPTA LHF N+L+ L S GI FVTLHVGAGTF PVK ED H
Sbjct: 171 QTVFHDPAKLASVAAPTASLHFDDNVLAALKSKGINTAFVTLHVGAGTFAPVKTEDILRH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-----EDGIINPWSGFT 293
MHSE + TA +N K+RGG++++VGTT R+LETA E+ +++ WSG T
Sbjct: 231 KMHSEYAELPQATADLINQTKARGGQVIAVGTTVTRVLETAFQKTASFENPMLSAWSGDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI P +RF +D L++NFHLPKSTLLMLVSAF G E K+ YQHAI YRF+SYGD
Sbjct: 291 DIFIYPSFRFGVIDKLITNFHLPKSTLLMLVSAFAGSEPIKQAYQHAIEQQYRFFSYGDA 350
Query: 354 SLL 356
LL
Sbjct: 351 MLL 353
>gi|224537235|ref|ZP_03677774.1| hypothetical protein BACCELL_02112 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521158|gb|EEF90263.1| hypothetical protein BACCELL_02112 [Bacteroides cellulosilyticus
DSM 14838]
Length = 352
Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats.
Identities = 124/363 (34%), Positives = 188/363 (51%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHRKTG---EIEHKEFKDVLNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++A D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSI-INRPVEAED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE ++ +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVNEEAVGIVNRAKDLNRQVCAVGTTVMRAIESTVSTDGHLKAYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMISNFHMPLSTLLMIVAAFGGYDQVMEAYNVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 TDK 352
>gi|317488559|ref|ZP_07947104.1| tRNA ribosyltransferase-isomerase [Eggerthella sp. 1_3_56FAA]
gi|316912301|gb|EFV33865.1| tRNA ribosyltransferase-isomerase [Eggerthella sp. 1_3_56FAA]
Length = 359
Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats.
Identities = 131/365 (35%), Positives = 188/365 (51%), Gaps = 16/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLPP IA P RD RL+V++ + D + D+ +L ND +V
Sbjct: 1 MKTSDFDYDLPPELIAQEPAAERDGCRLLVMNRVTG---EVEDRVFRDIVDYLTPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGD--ILH 116
N T+V+ A+L G + E + S W V RP K +K G ++
Sbjct: 58 ANETRVMPARLLGAKRGTGGAAEVFLLRQHGTPTENRSALWEVLVRPGKRLKPGTGAVVD 117
Query: 117 FFSQDGQSRLEATVIDKW---NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
F G+ L A ++D GE L + L+ + VG PLPPYI +
Sbjct: 118 FVDAVGEVALSAEIVDWLPDAQKGERLARLTTPLPSLDEALHAVGHTPLPPYIKDYAGDE 177
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
YQT Y++ + S AAPTAGLHFT L+ RL G++ V L VG TF V +
Sbjct: 178 EL----YQTVYSRRESSAAAPTAGLHFTPALIERLREQGVRWETVELEVGLDTFRIVDED 233
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGF 292
D H +H+E + T +A+ + RGGR+V+VGTTS+R LE+A + G + P
Sbjct: 234 DPTQHAIHTEYYTVPERTVEAIAETRERGGRVVAVGTTSVRSLESAWDDGTGAVTPRDRE 293
Query: 293 T-NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T ++++ PG +F VD L++NFH+P+STL+MLVSAF E Y+HAI YR S+G
Sbjct: 294 TTSLYLLPGSQFHVVDALITNFHVPRSTLMMLVSAFSTREHIMAAYRHAIEERYRMLSFG 353
Query: 352 DTSLL 356
D +
Sbjct: 354 DAMFI 358
>gi|299138179|ref|ZP_07031359.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX8]
gi|298600109|gb|EFI56267.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX8]
Length = 373
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 147/377 (38%), Positives = 203/377 (53%), Gaps = 24/377 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F +DLP IA RP R ++R+M + SDH ++LP L D +V
Sbjct: 1 MLVSDFHYDLPEELIAQRPPAVRGTSRMMTLDRRTGD---FSDHTFAELPLLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE-----KEISCTLHMRV----SPNSWSVYARPSKVIKK 111
N+++VI A+L R + I L R N WS RP+K I+
Sbjct: 58 MNDSRVIPARLFATRAGLTTQHNSPAPSGHIEVLLTQRHASAEGYNDWSALVRPAKKIQP 117
Query: 112 GDILHFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR-- 168
G+ L F D + L ATV+ GE L F + + + +G +PLPPYI R
Sbjct: 118 GETLLFAPDDSTAPLLRATVLSAGEFGERTLRFDPA-EDFHAALERIGHLPLPPYIHRSK 176
Query: 169 KRPIDARDYVDYQTTYAKI------QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
+ P + D YQT Y++ +GS AAPTAGLHFT +LS+L G++ +TLHV
Sbjct: 177 QEPNTSEDRERYQTVYSQQLTSAEAEGSAAAPTAGLHFTPEVLSQLKERGVEFATLTLHV 236
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
G GTF PV+VE T+D +H+E + TA+A+ + G RIV+VGTT+ R LE E
Sbjct: 237 GLGTFQPVRVERTEDIRLHAEHYTLSTTTAEAIQRARREGRRIVAVGTTTTRTLEHIARE 296
Query: 283 DGIIN--PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
SG T +F++PG F+ V L++NFHLP+STLLMLVSAF G E+ Y HA
Sbjct: 297 TNGSEIAAHSGSTALFLSPGVEFKLVGGLLTNFHLPQSTLLMLVSAFAGREQALAAYAHA 356
Query: 341 ISHAYRFYSYGDTSLLF 357
+ YRF+SYGD L+
Sbjct: 357 VEARYRFFSYGDCMLIT 373
>gi|116748011|ref|YP_844698.1| queuosine biosynthesis protein [Syntrophobacter fumaroxidans MPOB]
gi|116697075|gb|ABK16263.1| Queuosine biosynthesis protein [Syntrophobacter fumaroxidans MPOB]
Length = 357
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 133/358 (37%), Positives = 190/358 (53%), Gaps = 11/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++E+D+DLPPS IA P+ R+ +RL+V+ + DLP L++ D +V
Sbjct: 9 RLREYDYDLPPSLIAQSPLSRREESRLLVLDRGRGA---MDHVRFRDLPDHLHAEDLLVV 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTL-HMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + + A +K + G ++
Sbjct: 66 NDTRVVPARLIGFKDSGGRIELLVTEPYKSEAEGRRDGYWCLAAAAKRTRPGCLISLPDG 125
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID-ARDYVD 179
LEA G + V L +S +G +PLPPYI R D D
Sbjct: 126 TVAEVLEA------GDGGRIRVRFPDDRPLMTILSEIGAVPLPPYINRSGTGDFPGDAEA 179
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF+S LL + G++V +TLHVG GTF P++V+D DH
Sbjct: 180 YQTVYARNPGAVAAPTAGLHFSSALLEAVARAGVEVVRITLHVGYGTFAPIRVDDIRDHE 239
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E +D + + + S R RIV+VGTT +R LE G I P +G +I P
Sbjct: 240 MHPEYVRVDEDSTERIRSAIDRKRRIVAVGTTVVRSLEWIAHRRGEIMPAAGACAHYIYP 299
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRF+ VD +++NFHLP+S+LL+LVSAF G + Y+ AI YRF+SYGD L+
Sbjct: 300 GYRFKVVDAMITNFHLPRSSLLLLVSAFAGRRRILEAYREAIRREYRFFSYGDAMLIL 357
>gi|160888113|ref|ZP_02069116.1| hypothetical protein BACUNI_00521 [Bacteroides uniformis ATCC 8492]
gi|270295140|ref|ZP_06201341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
gi|317478138|ref|ZP_07937313.1| tRNA ribosyltransferase-isomerase [Bacteroides sp. 4_1_36]
gi|156862424|gb|EDO55855.1| hypothetical protein BACUNI_00521 [Bacteroides uniformis ATCC 8492]
gi|270274387|gb|EFA20248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
gi|316905736|gb|EFV27515.1| tRNA ribosyltransferase-isomerase [Bacteroides sp. 4_1_36]
Length = 352
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 121/363 (33%), Positives = 189/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RL+V+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLLVLHRKTG---EIEHKMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSI-INRPVEPDD 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 AERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE ++ + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVNEEAVRIVNHAKDLNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMISNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEEYRFGTYGDAMLI 349
Query: 357 FQK 359
+
Sbjct: 350 TDR 352
>gi|218131682|ref|ZP_03460486.1| hypothetical protein BACEGG_03303 [Bacteroides eggerthii DSM 20697]
gi|317474696|ref|ZP_07933970.1| tRNA ribosyltransferase-isomerase [Bacteroides eggerthii 1_2_48FAA]
gi|217985985|gb|EEC52324.1| hypothetical protein BACEGG_03303 [Bacteroides eggerthii DSM 20697]
gi|316909377|gb|EFV31057.1| tRNA ribosyltransferase-isomerase [Bacteroides eggerthii 1_2_48FAA]
Length = 352
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 123/363 (33%), Positives = 188/363 (51%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTRYRDESRLMVLHRKTG---EIEHRMFKDILEYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 EDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSI-INRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE + + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVTEEAVKIVNRAKDVNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 TDK 352
>gi|198283826|ref|YP_002220147.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218667799|ref|YP_002426463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|226713831|sp|B5EK09|QUEA_ACIF5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|198248347|gb|ACH83940.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218520012|gb|ACK80598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 345
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 135/359 (37%), Positives = 202/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F ++LP + IA P+ R +AR+++V + D V DLP L D +V
Sbjct: 1 MHKKDFHYELPDALIAQAPLPERSAARMLIVDGHQGTW---EDAWVRDLPGVLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L + + L + A+ SK ++ G +H
Sbjct: 58 LNDTRVLPARLQARK-----TTGGAVELLLDRLLDARDGWFLAKSSKALRPGMSIHLPGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A + G + + + + + G++PLPPYI +R +A D Y
Sbjct: 113 -------AVATVEEKDGMDVRLSLPADVAWLPILEAGGSMPLPPYI--RRAAEASDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF + LL L + G++ FVTLHVGAGTF+PV+ ED +H M
Sbjct: 164 QTVYAARPGAVAAPTAGLHFDTELLDALAARGVERTFVTLHVGAGTFLPVRSEDITEHPM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A T A+ + ++RGGR+++VGTT+ R LETA + G + P++G T +F+ PG
Sbjct: 224 HAETMEVSATTVAAVAAARARGGRVIAVGTTACRALETAA-QGGTLRPFTGETRLFLYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ D L++NFHLP+STLLMLV AF G+E Y+HA++ YRF+SYGD L+ +
Sbjct: 283 KTFQVTDGLLTNFHLPESTLLMLVCAFAGMECMLAAYRHAVAEGYRFFSYGDAMLISPQ 341
>gi|310822782|ref|YP_003955140.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
gi|309395854|gb|ADO73313.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
Length = 361
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 136/366 (37%), Positives = 196/366 (53%), Gaps = 19/366 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++DF+LP ++IA P+ RD++RLM V + +DLP+ L D +V
Sbjct: 4 RLSDYDFELPEAQIAQAPLGARDASRLMTVSRSTKAC---EHLRFADLPSLLRPGDVLVV 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEI---------SCTLHMRVSPNSWSVYARPSKVIKKG 112
N+ +VI A+L G + R E + S L + W + SK +K G
Sbjct: 61 NDARVIPARLLGAKVGTGGRVELLVVRPAASTMTSAALSLAAEAMDWICLGQASKGLKPG 120
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ F + + + + G L+ + G +PLPPYI R
Sbjct: 121 AQVAFGGG----LVGEVLEGLGGGEYRVRFQAPPGGSLQALLEQAGRLPLPPYIT--REP 174
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
DA D YQT YA+ G+VAAPTAGLHF+ + L + G++ VTL VG GTF+PV+
Sbjct: 175 DAADAERYQTLYARAPGAVAAPTAGLHFSEAIFEALDARGVRRVTVTLDVGPGTFLPVRE 234
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSG 291
E+ D H MH E + TA +N+ ++ G R+V+VGTT +R LE AT G++ +G
Sbjct: 235 EELDRHKMHPERYGVPEQTAAEVNAARAEGRRVVAVGTTVVRTLEAATDPATGLLRAGTG 294
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T +FI PGY FR VD++++NFHLP+STL+MLVSA G E T YQ A+ YRF+SYG
Sbjct: 295 ETVLFIRPGYAFRQVDLMLTNFHLPRSTLVMLVSALLGREHTLAAYQEAVREGYRFFSYG 354
Query: 352 DTSLLF 357
D L+
Sbjct: 355 DAMLVT 360
>gi|116625409|ref|YP_827565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Solibacter usitatus Ellin6076]
gi|122252302|sp|Q01SU0|QUEA_SOLUE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116228571|gb|ABJ87280.1| Queuosine biosynthesis protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 352
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 135/370 (36%), Positives = 190/370 (51%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFD+ LP IA + R ++R++VVH D DLP FL D +V
Sbjct: 1 MNLSEFDYHLPDELIAQEALADRAASRMLVVHREQGRW---EDRCFRDLPEFLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFC------------HINRREKEISCTLHMRVSPN--SWSVYARPS 106
N+++V A+L G R + L VS + W RP
Sbjct: 58 LNDSRVFPARLFGHRSGVHSLAVGKNNPKRHEFLSGAVEVFLLRAVSQDGRDWQALVRPG 117
Query: 107 KVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI 166
+ ++ G+ + F LEA +I + GE + F SG +L +G +PLPPYI
Sbjct: 118 RKMRTGERIVF-----DEGLEAEIIARGEFGERTVRFLGSG-DLYAAFDRIGHVPLPPYI 171
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R D YQT +A+ +GSVAAPTAGLHFT ++ R + G V VTLHVG GT
Sbjct: 172 K--RDDSPADRERYQTVFAREKGSVAAPTAGLHFTPEVIERCQAAGADVATVTLHVGLGT 229
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F P+ E ++ +H+E I A A + + R+V+VGTTS+R LETA +
Sbjct: 230 FQPLHQEVVEEVKLHTEHYRITADNAGKIGAAT----RVVAVGTTSVRTLETAARDG--- 282
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
G T+IF+ PG FR +++NFHLP+++LL+LVSAF G + Y+HA+ YR
Sbjct: 283 -VLEGETDIFLYPGVPFRRTGAMLTNFHLPRTSLLVLVSAFAGKDLMLAAYRHAVEARYR 341
Query: 347 FYSYGDTSLL 356
FYSYGD L+
Sbjct: 342 FYSYGDCMLI 351
>gi|167763958|ref|ZP_02436085.1| hypothetical protein BACSTE_02341 [Bacteroides stercoris ATCC
43183]
gi|167698074|gb|EDS14653.1| hypothetical protein BACSTE_02341 [Bacteroides stercoris ATCC
43183]
Length = 352
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 122/363 (33%), Positives = 188/363 (51%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTRYRDESRLMVLHRKTG---EIEHRMFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 EDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSI-INRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE + + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVTEEAVKVVNRAKDLNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAMLI 349
Query: 357 FQK 359
+
Sbjct: 350 TDR 352
>gi|121609294|ref|YP_997101.1| queuosine biosynthesis protein [Verminephrobacter eiseniae EF01-2]
gi|121553934|gb|ABM58083.1| Queuosine biosynthesis protein [Verminephrobacter eiseniae EF01-2]
Length = 384
Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats.
Identities = 136/367 (37%), Positives = 196/367 (53%), Gaps = 19/367 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R +ARL+ D + +LP L + D +V N
Sbjct: 15 LSDFDFTLPPELIAQHPAPERSAARLL-----DGRTAPPVDRIFRELPGLLRAGDLLVSN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISC-TLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+T+V+ A+L G + + N + + + K + G +
Sbjct: 70 DTRVLNARLFGAKASGGKLELLIERVLPAAAGSAGNEVAAHMKVGKKPQPGSTVQIAGGR 129
Query: 122 GQSRLEATVIDKWNT-GEILLVFSISG---IELERQISLVGTIPLPPYI-----ARKRPI 172
+AT++ +W T L F++ G + G +PLPPYI P
Sbjct: 130 QAGGFDATLLGRWPTADGPLYRFALHGPANESPWELMQRHGHLPLPPYIVRRQNTGHDPH 189
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
A D YQT +A+ G+VAAPTA LHF ++LS L + GI+ +TLHVGAGTF+PVK
Sbjct: 190 GAEDSQRYQTLFARHPGAVAAPTAALHFDQSVLSALAARGIEHASITLHVGAGTFLPVKT 249
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E+ + H MHSE + T AL + RG R+V+VGTT++R LE+ +G
Sbjct: 250 ENLEQHRMHSEWYRLPPSTLTALERCRQRGARVVAVGTTTVRTLESWARSGLA----TGE 305
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPG+ F+ VD+L++NFHLPKSTL+MLVSAF G +Y+HA++ YRF+SYGD
Sbjct: 306 TSIFITPGFPFQVVDLLITNFHLPKSTLMMLVSAFAGHAHVMALYRHAMAQRYRFFSYGD 365
Query: 353 TSLLFQK 359
LL ++
Sbjct: 366 AMLLARQ 372
>gi|296134757|ref|YP_003641999.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thiomonas
intermedia K12]
gi|295794879|gb|ADG29669.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thiomonas
intermedia K12]
Length = 406
Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats.
Identities = 146/387 (37%), Positives = 195/387 (50%), Gaps = 37/387 (9%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+FDF LPP IA P R +RL+ + P + D DLP L ++D +VFN+
Sbjct: 23 DDFDFHLPPELIAQHPPARRSDSRLL----DAGSPPTLIDRGFRDLPGLLRADDLVVFND 78
Query: 64 TKVITAQLNGVRFCHINRREKE--ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF--- 118
T+VI A+L G + + + + N + R SK K G +L
Sbjct: 79 TRVIPARLWGFKAAGEAGAALGGAVEVLVERVRADNRVWAHVRASKSPKPGQVLWLGAAR 138
Query: 119 -------SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
G + L A + L E + G +PLPPYI
Sbjct: 139 PDAAAGDEPHGSAPLFAVTTVGRAGPDGGLFELEFPAEPLALLQQYGAVPLPPYITHAPG 198
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D YQT YA+ GSVAAPTAGLHF +L + +IG + VTLHVGAGTF PV+
Sbjct: 199 SDDVQ--RYQTVYAQHPGSVAAPTAGLHFDEAILEAIDAIGAQRAAVTLHVGAGTFQPVR 256
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRG------------GRIVSVGTTSLRLLETA 279
V D H MHSE + T+QA+ V+ R R+V+VGTT++R LE+A
Sbjct: 257 VNDLRQHQMHSEWYTVPEATSQAIAKVRMRQAQARAAGQLHAAPRVVAVGTTAMRALESA 316
Query: 280 TT-------EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
DG + P + T +F+TPGYRFR VD L++NFHLPKSTLLMLVSAF G++
Sbjct: 317 ALAAEAAGAPDGTVIPGARDTALFVTPGYRFRVVDALLTNFHLPKSTLLMLVSAFAGMDT 376
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ Y HAI+ YRF+SYGD L ++
Sbjct: 377 IRAAYAHAIAQRYRFFSYGDAMWLTRQ 403
>gi|329956430|ref|ZP_08297027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
clarus YIT 12056]
gi|328524327|gb|EGF51397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
clarus YIT 12056]
Length = 352
Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats.
Identities = 123/363 (33%), Positives = 188/363 (51%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTRYRDESRLMVLHRKTG---EIEHRMFKDILEYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 EDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSI-INRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE + + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVTEDAVKVVNRTKDLNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 TDK 352
>gi|229496076|ref|ZP_04389798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
gi|229316972|gb|EEN82883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
Length = 349
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 130/361 (36%), Positives = 181/361 (50%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP IA PV RD +RLM++H I + D+ + D V
Sbjct: 1 MKLSEFGFDLPQELIASHPVEHRDESRLMILHRKDGS---IEHGIFKDILKYFGKGDTFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKVI A+L G + + +I L ++P W V P++ I+ G+ L+F
Sbjct: 58 FNNTKVIPARLYGKK----EKTNAKIEVFLLRELNPQIKLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
DG L A VID G L F G E + + +G PLP Y+ R D
Sbjct: 114 PDDG---LMAEVIDNTINGGRTLRFLYDGSHEEFKSYLYALGEAPLPKYME--RDATEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT YA +G+V AP AGLHF+ LL RL ++ ++TLH G G F +ED
Sbjct: 169 LERFQTIYASEEGAVIAPAAGLHFSRELLKRLEIADCRLAYLTLHNGLGNFENQDIEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H ++E FI + + G IV+VGT+ LR LETA + DG + + G+TN +
Sbjct: 229 KHKKNNEQMFIGPECCEITRKARDEGKHIVAVGTSVLRALETAVSTDGYVKEFDGWTNKY 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y V L++NFH+P+S LLM +A G + Y+ A YRF +YGD L+
Sbjct: 289 IYPPYPIEFVTSLITNFHMPQSLLLMNAAAVAGYQNIMNAYEVAKQEKYRFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|254167600|ref|ZP_04874451.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|289596968|ref|YP_003483664.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|197623409|gb|EDY35973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|289534755|gb|ADD09102.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
Length = 332
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 203/357 (56%), Gaps = 30/357 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +DF+LP IA PV PRD ARLMV+ I +LP +++ D ++ N
Sbjct: 4 LRNYDFELPEELIAQEPVEPRDHARLMVLRKG------IEHRYFYNLPEYMDKGDVLILN 57
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G++ ++ + ++ N + + K I G +L F G
Sbjct: 58 DTKVIKARIRGIKD-----TGGKVEILILEKLGENYYRCLVK-GKKIHPGSVLIFEDIKG 111
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
V+ + N G + FS ++L R+ G +PLPPYI YQT
Sbjct: 112 -------VVREKNEGICDIEFSGDIMDLARRR---GEVPLPPYIKNPPTD---AEEKYQT 158
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ +G+VAAPTAGLHFT LL + G+K+ ++TLHV GTF PVK ED +H +
Sbjct: 159 VFARREGAVAAPTAGLHFTPQLLKEIEKKGVKIGYITLHVSYGTFKPVKTEDIREHRVDE 218
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A+ +N R GR+ +VGTT R LE+ ++++GII P G+T IFI PGY+
Sbjct: 219 EYYIVGEEVAKLINE---REGRLFAVGTTVTRALES-SSKNGIIYPSRGYTIIFIYPGYK 274
Query: 303 FRA-VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F++ +D L++NFH+P+S+L++LV+AF G E K Y+ AI YRFYS+GD L+F+
Sbjct: 275 FQSGIDALITNFHVPRSSLILLVTAFGGYERIMKAYRIAIEKKYRFYSFGDAMLIFK 331
>gi|254476236|ref|ZP_05089622.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. R11]
gi|214030479|gb|EEB71314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. R11]
Length = 353
Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats.
Identities = 161/348 (46%), Positives = 215/348 (61%), Gaps = 14/348 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNG- 73
IA RP PR SARL+V ISD V+DL +L D +V N+TKVI A+L+G
Sbjct: 15 IATRPAVPRTSARLLVAE-----ADQISDATVADLGQWLRPGDRLVLNDTKVIPARLSGQ 69
Query: 74 -VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVID 132
R ++ TL + SWS +P K +K G+ + F Q L A +D
Sbjct: 70 RHRDTAQGPMAAKVEVTLLEPGADGSWSALLKPLKKVKLGEEIIFSDQ-----LSAR-LD 123
Query: 133 KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVA 192
+ G+ L F++SG + + ++ G +PLPPYIA KR D +D DYQT +A+ G+VA
Sbjct: 124 RVEDGQGYLAFNLSGDDFDTALAEAGAMPLPPYIAAKRAADEQDKTDYQTVWARNSGAVA 183
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTA LHF LL++L +G+ +VTLHVGAGTF+PVKVED H MHSE G + A A
Sbjct: 184 APTASLHFDETLLAQLREMGVSFSYVTLHVGAGTFLPVKVEDVTTHKMHSEWGRVSADAA 243
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+ + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG+ F D LM+N
Sbjct: 244 AEIAATKAAGGRVIPVGTTALRLIESAARS-GAIEPWEGDTDIFIYPGFTFNVADALMTN 302
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
FHLPKSTL+MLVSA G E +++Y+HA+S YRF+SYGD SLL +
Sbjct: 303 FHLPKSTLMMLVSALMGQERIREIYEHAVSQRYRFFSYGDASLLIPAK 350
>gi|294338718|emb|CAZ87050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Thiomonas sp. 3As]
Length = 391
Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats.
Identities = 148/391 (37%), Positives = 201/391 (51%), Gaps = 45/391 (11%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+FDF LPP IA P R +RL+ + P + D DLP L + D +VFN+
Sbjct: 8 DDFDFHLPPELIAQHPPARRSDSRLL----DAGNPPALIDRGFRDLPGLLRAGDLVVFND 63
Query: 64 TKVITAQLNGVRFCHINRREKE--ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
T+VI A+L G + + + + N + R SK K G +L
Sbjct: 64 TRVIPARLWGFKAAGEAGAALGGAVEVLVERVRADNRVWAHVRASKSPKPGQVLWL---- 119
Query: 122 GQSRLEATVIDKWNTGEILLVFSISG--------------IELERQISLVGTIPLPPYIA 167
G +R +A D+ + L + G E + G +PLPPYI
Sbjct: 120 GAARPDAAAGDEPHASAPLFAVTTVGRAGPDGGLFELEFPAEPLALLQQYGAVPLPPYIT 179
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
D YQT YA+ GSVAAPTAGLHF +L+++ ++G + VTLHVGAGTF
Sbjct: 180 HAPGGDDVQ--RYQTVYAQHPGSVAAPTAGLHFDEAILAKIDAMGAQRAAVTLHVGAGTF 237
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRG------------GRIVSVGTTSLRL 275
PV+V D H MHSE + TAQA+ V+ R R+V+VGTT++R
Sbjct: 238 QPVRVNDLRQHQMHSEWYTVPEATAQAIAKVRMRQAQARAAGQMHAAPRVVAVGTTAMRA 297
Query: 276 LETATT-------EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC 328
LE+A DG + P + T +F+TPGYRFR VD L++NFHLPKSTLLMLVSAF
Sbjct: 298 LESAALAAEAAGAPDGAVLPGARDTALFVTPGYRFRVVDALLTNFHLPKSTLLMLVSAFA 357
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
G++ + Y HAI+ YRF+SYGD L ++
Sbjct: 358 GMDTIRAAYAHAIAQRYRFFSYGDAMWLTRQ 388
>gi|149202089|ref|ZP_01879062.1| Queuosine biosynthesis protein [Roseovarius sp. TM1035]
gi|149144187|gb|EDM32218.1| Queuosine biosynthesis protein [Roseovarius sp. TM1035]
Length = 362
Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats.
Identities = 163/360 (45%), Positives = 224/360 (62%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL+V I+D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRRAARLLVAEGEG-----ITDAGVADLGRWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R +I TL + SW +P K + +G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRSGAQGDTAAKIEVTLLEPGADGSWGALIKPLKKVSEGEEIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A ++ K G+ L F++ G + + ++ G +PLPPYIA +RP D +D V
Sbjct: 116 E-----RLSAVLLAKE-EGQGRLRFNLVGDDFDAALAEAGAMPLPPYIAARRPADEQDKV 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L ++G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARAPGAVAAPTASLHFDEALLAELAALGVGFSHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + ++ GGRI+ VGTT+LRL+ETA G I WSG T+IFI
Sbjct: 230 RMHAEWGEVSAKAAAEMAATRAAGGRIIPVGTTALRLIETAARATGEIAAWSGDTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G + +++Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVADALMTNFHLPKSTLMMLVSALMGQDTIRRIYAHAVAARYRFFSYGDASLLIP 349
>gi|330997201|ref|ZP_08321054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
gi|329570996|gb|EGG52703.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
Length = 353
Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats.
Identities = 126/363 (34%), Positives = 190/363 (52%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M + +F F LP +IA P RD +RLMV+H I D+ + + D
Sbjct: 1 MKLSQFKFKLPEEQIAQYPARHRDESRLMVLHKKSGD---IEHREYFKDILDYFDDKDVF 57
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHF 117
+FN+TKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 IFNDTKVFPARLYGNK----EKTGARIEVFLLRELNEDLRLWDVLVDPARKIRIGNKLYF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDAR 175
D + A VID + L F G E + + +G PLP +I KRP +
Sbjct: 114 GEDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKAALYALGEAPLPKHI-VKRPAEPE 169
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +Q +A+ +G+V AP+AGLHF+ L+ RL G+ FVT+H G G F + VED
Sbjct: 170 DMERFQCIFARNEGAVTAPSAGLHFSRELMKRLEIKGVNFAFVTMHCGLGCFRDIDVEDL 229
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H M SE F+ A + +N+ K G R+ +VGTT R+LETA D + ++G+TN
Sbjct: 230 TKHKMDSEEMFVGADACRIVNTAKEGGHRVCAVGTTVQRVLETAVGTDCNLKEFTGWTNK 289
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y F D +++NF++P ST+LML +A+ G + + Y+ A+ YRF +YGD L
Sbjct: 290 FIFPPYEFGVADCMVANFYMPYSTMLMLTAAYGGYDLVMQGYKEALKEGYRFGTYGDAML 349
Query: 356 LFQ 358
+
Sbjct: 350 ILN 352
>gi|91205719|ref|YP_538074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii RML369-C]
gi|122425478|sp|Q1RI29|QUEA_RICBR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91069263|gb|ABE04985.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii RML369-C]
Length = 353
Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats.
Identities = 145/365 (39%), Positives = 215/365 (58%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ RD + L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPLELIAQNPISKRDESNLLIA-----STQQYVKTKFYNIIDYLKEGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------NSWSVYARPSKVIKKGDI 114
FNN+KVI A+L+ + IN ++ + WS +A+P++ +K GD
Sbjct: 56 FNNSKVIKAKLSLDKNITINLNQRLKDNRRATNDDAGRLKSIDYWSAFAKPARKLKVGDE 115
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+F + + +K GEI + F ++ I + + G +PLP YI R
Sbjct: 116 FYF------DNHKIIITEKLEMGEIKIKFELANISVFEFLDKYGEMPLPLYIKRPER-QK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+ IQGSVAAPTAGLHFT++++++L + G++V FVTLHVGAGTFMPVK E+
Sbjct: 169 SDDERYQTVYSNIQGSVAAPTAGLHFTNDIINKLKAKGVQVAFVTLHVGAGTFMPVKTEN 228
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
++H MH+E I TA +N K RI++VGTTSLR LE+ + +G +N T+
Sbjct: 229 INEHKMHTEYCSITPETAAIINKAKKEKRRIIAVGTTSLRTLES-SGINGNVNSGDFETD 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPG++F+ VD+L++NFH PKSTL MLV AF G ++ ++Y++AI RF+SYGD +
Sbjct: 288 IFITPGFKFQIVDMLLTNFHFPKSTLFMLVCAFAGFKKMHELYKYAIEEQMRFFSYGDAT 347
Query: 355 LLFQK 359
LL++K
Sbjct: 348 LLYRK 352
>gi|258404231|ref|YP_003196973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfohalobium retbaense DSM 5692]
gi|257796458|gb|ACV67395.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfohalobium retbaense DSM 5692]
Length = 363
Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats.
Identities = 128/364 (35%), Positives = 191/364 (52%), Gaps = 21/364 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ + F+LP +IA P RD++RL+++ + DL L +V N
Sbjct: 10 LDAYQFELPADQIAQHPHPQRDASRLLILDRSSGQR---QHATFRDLVDTLPDGALLVAN 66
Query: 63 NTKVITAQLNGVRFCHINRRE--------KEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
++V+ A+L G + + E L + S R SK + G
Sbjct: 67 TSRVLPARLKGQKRATGGKVEFLLLTPLPLVTPQPLADGRNEGFVSGLLRSSKPLAVGQK 126
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
F +E TVI++ G + + SG ++ G +PLPPYI R DA
Sbjct: 127 ADFPGG-----IELTVIEREEFGRVQVRLCWSG-DMAEVFQAYGHMPLPPYIQ--REDDA 178
Query: 175 RDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D+ YQT YA GSVAAPTAGLHFT ++L L GI+ VTL+VG GTF P++
Sbjct: 179 TDHGRYQTVYADSAKTGSVAAPTAGLHFTDDVLHALRDKGIQWAEVTLYVGYGTFSPLRC 238
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
D +H MH E +DA A+ ++ ++ G +V+VGTT++R LE+ G I P++G+
Sbjct: 239 RDIREHHMHPEYIELDAANAETISRAQAEGRPVVAVGTTTVRTLESIAHHCGRIQPFAGW 298
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG+ FR VD L++NFHLP S+L+++V+AF G + Y+ A+ YRF+SYGD
Sbjct: 299 TDIFIYPGFSFRVVDHLLTNFHLPGSSLILMVAAFAGRRLVLEAYEEAVDEGYRFFSYGD 358
Query: 353 TSLL 356
+
Sbjct: 359 AMFI 362
>gi|325831983|ref|ZP_08165080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eggerthella
sp. HGA1]
gi|325486304|gb|EGC88756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eggerthella
sp. HGA1]
Length = 361
Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats.
Identities = 129/371 (34%), Positives = 185/371 (49%), Gaps = 26/371 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LPP IA P RD RL+V+ + + D + D+ +L ND +V
Sbjct: 1 MKTSDFDYELPPELIAQEPAADRDGCRLLVMDRSTG---KLEDRIFRDIVDYLRPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--------WSVYARPSKVIKKG 112
N T+V+ A+L G + L V W V RP K +K G
Sbjct: 58 ANETRVMPARLLGAK----RGTGGAAEVFLLREVHDREPRTNRSALWEVLVRPGKRLKPG 113
Query: 113 D--ILHFFSQDGQSRLEATVIDKW---NTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
++ F G L A ++D GE L + + L+ + VG PLPPYI
Sbjct: 114 TGAVVDFADAQGDVALSAEIVDWADGAQKGERLARLTTTLPSLDEALHAVGHTPLPPYIK 173
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
+ YQT Y++ + S AAPTAGLHFT L+ RL G++ V L VG TF
Sbjct: 174 NYAGDEEL----YQTVYSRRESSAAAPTAGLHFTPALIERLRDQGVRWETVELEVGLDTF 229
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGII 286
V +D H++H+E + T A+ + R GR+V+VGTTS+R LE+A E G +
Sbjct: 230 RIVDEDDPQKHVIHTEYYTVPQRTVDAIAETRERSGRVVAVGTTSVRSLESAWNPETGAV 289
Query: 287 NPWSGFT-NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
T ++++ PG +F VD L++NFH+P+STL+MLVSAF E Y+HAI Y
Sbjct: 290 TARDRETTSLYLLPGSQFHVVDALVTNFHVPRSTLMMLVSAFSSREHIMAAYEHAIEERY 349
Query: 346 RFYSYGDTSLL 356
R S+GD +
Sbjct: 350 RLLSFGDAMFI 360
>gi|319900631|ref|YP_004160359.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Bacteroides helcogenes P 36-108]
gi|319415662|gb|ADV42773.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Bacteroides helcogenes P 36-108]
Length = 352
Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats.
Identities = 124/363 (34%), Positives = 189/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHRKTG---EIEHRMFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++A D
Sbjct: 114 DDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHGI-INRPVEAED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI +VTLH G G F + VED
Sbjct: 170 AERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYVTLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE + A + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMTVSAEAVKVVNRAKDFNRQVCAVGTTVIRAIESTVSTDGHLKEYVGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYDQVMNAYDIALKEEYRFGTYGDAMLI 349
Query: 357 FQK 359
+
Sbjct: 350 TDR 352
>gi|258593143|emb|CBE69454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [NC10
bacterium 'Dutch sediment']
Length = 379
Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats.
Identities = 144/383 (37%), Positives = 196/383 (51%), Gaps = 36/383 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FD+ LPP IA PV RD +RL+V+ N + D + DLP +L D +V
Sbjct: 5 LRTVDFDYTLPPELIAQAPVPERDRSRLLVLDRNTGA---LHDRIFRDLPEYLVPGDLLV 61
Query: 61 FNNTKVITAQLNGV-RFCHINRREKEISCTLHMRVSP---NSWSVYARPSKVIKKGDILH 116
N KVI A+L G H + + P + W +PS+ ++ GD L
Sbjct: 62 INEAKVIPARLFGRSERRHQIEVLLLYEVEVDPDMGPAGTDRWEALIKPSRQVRIGDRLA 121
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR------ 170
+ A VI+K G LL G L + G +P+PPYI R+
Sbjct: 122 LADDT----ITAEVIEKRGEGRHLLKLVYDGR-LADLLWRFGRMPVPPYIKRQGIGYRVE 176
Query: 171 -----------------PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
+ D YQT YAK +G+VAAPTAGLHFT +L+ L GI
Sbjct: 177 GLEQGFPSPLDPGPYLLDPNTLDRERYQTVYAKHEGAVAAPTAGLHFTPDLIETLTRQGI 236
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
V +TL VG GTF PV++++ H M E I TA A+ + + G R+++VGTT++
Sbjct: 237 AVTPITLFVGPGTFRPVRMKEVAQHRMEPERYIIPEQTALAVKAARREGRRVIAVGTTTV 296
Query: 274 RLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEET 333
R LE A T G I G T++FI PGYRF ++D +++NFHLP STL MLVSAF G E
Sbjct: 297 RTLEHA-TVMGEIRAGVGLTDLFIYPGYRFTSIDAIITNFHLPCSTLFMLVSAFAGRETM 355
Query: 334 KKMYQHAISHAYRFYSYGDTSLL 356
Y+ AI+ YRFYSYGD L+
Sbjct: 356 LAAYREAIARCYRFYSYGDAMLI 378
>gi|193212984|ref|YP_001998937.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
gi|193086461|gb|ACF11737.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
Length = 346
Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats.
Identities = 118/359 (32%), Positives = 187/359 (52%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP +RIA P PRD+ +LMV++ I + +D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTRIADHPESPRDACKLMVLNRRKKD---IEHKVFTDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 VNNSRVFPAKIFGQK----EKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I++ + + +G +PLPPY R D
Sbjct: 113 ----EDDVVAEVVDNTTSRGRTIRFLNPDIDVFKMVEKIGQVPLPPYFT--RKPKDSDRT 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP GLHFT LL ++ +G+K+ +TLH TF ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMGGLHFTMPLLEQIQKVGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K R+ VGTT+ R LE T +G I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKVNKSGRVFVVGTTTCRALEANATVEGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y F+ D L++NF P++TL+M+VSAF Y+ A+ + YRF +YGD+ L+
Sbjct: 287 YPPYNFKVTDALITNFQQPETTLMMVVSAFAEHRLLMDAYKTALKNNYRFLAYGDSMLI 345
>gi|51246695|ref|YP_066579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfotalea psychrophila LSv54]
gi|81641194|sp|Q6AJA8|QUEA_DESPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|50877732|emb|CAG37572.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfotalea psychrophila LSv54]
Length = 358
Score = 355 bits (910), Expect = 8e-96, Method: Composition-based stats.
Identities = 121/353 (34%), Positives = 186/353 (52%), Gaps = 10/353 (2%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+ + + LP IA +P RD ++LMV++ + + + +++ ++N D ++ NN
Sbjct: 8 EAYYYHLPEENIAQKPADKRDHSKLMVLNTSTG---KVEHKIFNNVLEYINPGDMLIVNN 64
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
TKV A+L G + + ++R + + S+ K G L
Sbjct: 65 TKVFPARLTGHKESGGKVEVFLLELPTYIRPGVSESIALIKSSRKPKVGSTLTI-----N 119
Query: 124 SRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L V ++ G+ L +++ ++ +G IPLPPYI R+ D YQT
Sbjct: 120 EALSCRVTEQLAGGKARLQLHYDKDVDVTEILAGIGEIPLPPYIKREEGTTPEDVTRYQT 179
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA + G+VAAPTAGLHFT LL L GI+ VTLHVG GTF PV+ E+ +H +H
Sbjct: 180 VYANVPGAVAAPTAGLHFTEELLQSLRENGIQFGEVTLHVGYGTFAPVRAENIVEHNIHE 239
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNIFITPGY 301
E + T + + + GG+I +VGTT++R LE A G I G+ ++I PG+
Sbjct: 240 EFVSVGQETVDKIIATRKAGGKIWAVGTTTVRSLEFAAAQHGGQIAATEGWCALYIYPGF 299
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ +D L++NFHLP S+L+ LVSA C E+ + YQ AI YRF+SYGD
Sbjct: 300 KFQVIDNLITNFHLPDSSLMFLVSALCRREKLLECYQMAIKEDYRFFSYGDAM 352
>gi|313608657|gb|EFR84503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL F2-208]
Length = 314
Score = 355 bits (910), Expect = 8e-96, Method: Composition-based stats.
Identities = 139/329 (42%), Positives = 201/329 (61%), Gaps = 17/329 (5%)
Query: 29 MVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISC 88
MV+ I D +++ ++LN DA+V N+T+V+ A+L+G++ I
Sbjct: 1 MVLDKESGD---IKDQHFTEIISYLNEGDALVLNDTRVLPARLHGIKD----ETGAHIEV 53
Query: 89 TLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI 148
L + N+W +P+K I+KG + F G L+AT +++ G +L FS GI
Sbjct: 54 LLLKQKEGNAWETLVKPAKRIRKGATITF----GDGALKATCLEELEHGGRILEFSYEGI 109
Query: 149 ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
+ +G +PLPPYI + YQT YAK GS AAPTAGLHFT +LL+++
Sbjct: 110 -FYEVLEQLGEMPLPPYIKEQLADQD----RYQTVYAKENGSAAAPTAGLHFTKDLLAKI 164
Query: 209 ISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSV 268
+ G+++ FVTLHVG GTF PV VEDT +H MHSE + +A+ +N +K++GG++V+V
Sbjct: 165 SAKGVEIIFVTLHVGLGTFRPVDVEDTANHKMHSEFYRLTEESAERINKIKAQGGKVVAV 224
Query: 269 GTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAF 327
GTTS+R LET A+ DG + SG+T IFI+PGY F+AVD L++NFHLPKSTL+MLVSA
Sbjct: 225 GTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSAL 284
Query: 328 CGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ Y HA+ YRF+S+GD +
Sbjct: 285 SDRTKILAAYNHAVEEQYRFFSFGDAMFI 313
>gi|91207425|sp|Q5FR06|QUEA_GLUOX RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 347
Score = 355 bits (910), Expect = 8e-96, Method: Composition-based stats.
Identities = 173/353 (49%), Positives = 225/353 (63%), Gaps = 15/353 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP IA P PRDSA L+ V P L H++ DLP FL D ++ NNT
Sbjct: 8 FDFELPRDHIATEPARPRDSATLLHVRPGLPPDP----HVIRDLPDFLREGDLLIANNTA 63
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI AQL R E +I TL ++ SW AR S+ +K DILHF G
Sbjct: 64 VIRAQLAATR------GEAKIGLTLDRILANGSWHALARNSRKLKPQDILHF----GDDP 113
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ ATVI+ G + + FS+ G E + + VG + LPPYI R +D DY+T ++
Sbjct: 114 VTATVIENEGDGAVSIRFSVEGDEFDAFLERVGALALPPYIERPFGPTKQDDADYRTIFS 173
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
+ +G+VAAPTAGLHFT +L+ L + GI+ +TLHVGAGTF+PV+ +H MH+E G
Sbjct: 174 QYRGAVAAPTAGLHFTPEVLAALDAKGIQRRTLTLHVGAGTFLPVRS-TIAEHKMHAEWG 232
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
IDA TA A+N ++RGGRIV+VGTTSLRLLE+A EDG + PW G T+IFI PGYRF+A
Sbjct: 233 EIDAETAAAINETRARGGRIVAVGTTSLRLLESAAREDGTVAPWRGETSIFIKPGYRFKA 292
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
VD+LM+NFHLP+STL MLV AF G E ++ Y +AI++ RFYSYGD LL +
Sbjct: 293 VDVLMTNFHLPRSTLFMLVCAFSGTETMREAYAYAIANGLRFYSYGDACLLER 345
>gi|328954311|ref|YP_004371645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfobacca acetoxidans DSM 11109]
gi|328454635|gb|AEB10464.1| S-adenosylmethionine:tRNAribosyltransferase-isom erase
[Desulfobacca acetoxidans DSM 11109]
Length = 353
Score = 355 bits (910), Expect = 8e-96, Method: Composition-based stats.
Identities = 141/369 (38%), Positives = 201/369 (54%), Gaps = 28/369 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M + ++D+ LPP IA P+ RD AR++V+ VI + LP FL+ D
Sbjct: 1 MKMYSINDYDYHLPPQLIAQEPLPQRDQARMLVLERAAG---VIRHCRFTQLPEFLSDRD 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---------SWSVYARPSKV 108
+V NNT+V A+L G + + L +P + R SK
Sbjct: 58 VLVVNNTQVFPARLRGCKAS-----GGRVEVLLLQPPTPEGNGDVPRQARVPAWYRASKP 112
Query: 109 IKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
K G +L+F + LE + GEI L+ G ++ + ++ G +PLPPYI R
Sbjct: 113 PKVGQMLNFGLE-----LEGEITAVGPAGEITLLLQSQGRDIRQVVAEAGAMPLPPYIRR 167
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ YQT +A G++AAPTAGLHFT LL +L + G++V +TLHVG GTF
Sbjct: 168 LAGPEDTL--RYQTIFAHRLGAIAAPTAGLHFTPALLHQLEAGGVEVVSLTLHVGPGTFQ 225
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV+ ED H + E + A +A A+N ++ G IV+VGTT++R+LE+ + G +
Sbjct: 226 PVREEDYSRHRLAPEYFLLSAESAAAINRARAGGKHIVAVGTTTVRVLESQYCQ-GQVFA 284
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
G+ ++FI P YRF VD L++NFHLPKSTLL+LVSAF G E + YQ AI+ YRFY
Sbjct: 285 GEGYCDLFIYPRYRFNVVDRLITNFHLPKSTLLLLVSAFAGREFVLRAYQEAIAARYRFY 344
Query: 349 SYGDTSLLF 357
SYGD L+
Sbjct: 345 SYGDCMLII 353
>gi|254167112|ref|ZP_04873965.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|197623968|gb|EDY36530.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
Length = 332
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 133/357 (37%), Positives = 203/357 (56%), Gaps = 30/357 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +DF+LP IA PV PRD ARLMV+ I +LP +++ D ++ N
Sbjct: 4 LRNYDFELPEELIAQEPVEPRDHARLMVLRKG------IEHRYFYNLPEYMDKGDVLILN 57
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G++ ++ + ++S N + + K I G +L F G
Sbjct: 58 DTKVIKARIRGIKD-----TGGKVEILILEKLSENYYRCLVK-GKKIHPGSVLIFEDIKG 111
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
V+ + N G + FS ++L R+ G +PLPPYI YQT
Sbjct: 112 -------VVREKNEGICEIEFSGDIMDLARRR---GEVPLPPYIKNPPND---AEEKYQT 158
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ +G+VAAPTAGLHFT LL + G+K+ ++TLHV TF PVK ED +H +
Sbjct: 159 VFARREGAVAAPTAGLHFTPQLLKEIEKKGVKIGYITLHVSYSTFKPVKTEDIREHKVDE 218
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + ++ +N R GR+ +VGTT R LE+ ++++GII P G+TNIFI GY+
Sbjct: 219 EYYIVGEEVSKLINE---REGRLFAVGTTVTRALES-SSKNGIIYPSHGYTNIFIYSGYK 274
Query: 303 FRA-VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F++ +D L++NFH+P+S+L++LV+AF G E K Y+ AI YRFYS+GD L+F+
Sbjct: 275 FQSGIDALITNFHVPRSSLILLVTAFGGYERIMKAYRIAIEKKYRFYSFGDAMLIFK 331
>gi|157826819|ref|YP_001495883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii OSU 85-389]
gi|166216747|sp|A8GVG9|QUEA_RICB8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157802123|gb|ABV78846.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii OSU 85-389]
Length = 353
Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats.
Identities = 146/365 (40%), Positives = 215/365 (58%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ RD + L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPLELIAQNPISKRDESNLLIA-----STQQYVKTKFYNIIDYLKEGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------NSWSVYARPSKVIKKGDI 114
FNN+KVI A+L+ + IN ++ + WS +A+P++ +K GD
Sbjct: 56 FNNSKVIKAKLSLDKNITINLNQRLKDNRRATNDDAGRLKSIDYWSAFAKPARKLKVGDE 115
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+F + + +K GEI + F ++ I + + G +PLP YI R
Sbjct: 116 FYF------DNHKIIITEKLEMGEIKIKFELANISVFEFLDKYGEMPLPLYIKRPER-QK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+ IQGSVAAPTAGLHFT++++++L + G++V FVTLHVGAGTFMPVK E+
Sbjct: 169 SDDERYQTVYSNIQGSVAAPTAGLHFTNDIINKLKAKGVQVAFVTLHVGAGTFMPVKTEN 228
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
++H MH+E I TA +N K RI++VGTTSLR LE+ + +G +N T+
Sbjct: 229 INEHKMHTEYCSITPETAAIINKAKKEKRRIIAVGTTSLRTLES-SGINGNVNSGDFETD 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPG++F+ VD+L++NFH PKSTL MLV AF G +E ++Y++AI RF+SYGD +
Sbjct: 288 IFITPGFKFQIVDMLLTNFHFPKSTLFMLVCAFAGFKEMHELYKYAIEEQMRFFSYGDAT 347
Query: 355 LLFQK 359
LL++K
Sbjct: 348 LLYKK 352
>gi|58039882|ref|YP_191846.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconobacter oxydans 621H]
gi|58002296|gb|AAW61190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconobacter oxydans 621H]
Length = 357
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 173/353 (49%), Positives = 225/353 (63%), Gaps = 15/353 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP IA P PRDSA L+ V P L H++ DLP FL D ++ NNT
Sbjct: 18 FDFELPRDHIATEPARPRDSATLLHVRPGLPPDP----HVIRDLPDFLREGDLLIANNTA 73
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI AQL R E +I TL ++ SW AR S+ +K DILHF G
Sbjct: 74 VIRAQLAATR------GEAKIGLTLDRILANGSWHALARNSRKLKPQDILHF----GDDP 123
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ ATVI+ G + + FS+ G E + + VG + LPPYI R +D DY+T ++
Sbjct: 124 VTATVIENEGDGAVSIRFSVEGDEFDAFLERVGALALPPYIERPFGPTKQDDADYRTIFS 183
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
+ +G+VAAPTAGLHFT +L+ L + GI+ +TLHVGAGTF+PV+ +H MH+E G
Sbjct: 184 QYRGAVAAPTAGLHFTPEVLAALDAKGIQRRTLTLHVGAGTFLPVRS-TIAEHKMHAEWG 242
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
IDA TA A+N ++RGGRIV+VGTTSLRLLE+A EDG + PW G T+IFI PGYRF+A
Sbjct: 243 EIDAETAAAINETRARGGRIVAVGTTSLRLLESAAREDGTVAPWRGETSIFIKPGYRFKA 302
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
VD+LM+NFHLP+STL MLV AF G E ++ Y +AI++ RFYSYGD LL +
Sbjct: 303 VDVLMTNFHLPRSTLFMLVCAFSGTETMREAYAYAIANGLRFYSYGDACLLER 355
>gi|78355089|ref|YP_386538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|91207423|sp|Q317N3|QUEA_DESDG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78217494|gb|ABB36843.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 380
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 136/366 (37%), Positives = 189/366 (51%), Gaps = 31/366 (8%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+ F+LP +IA P R ++RL V+ S D+ +FL +V NN++
Sbjct: 32 YRFELPEEQIAQHPPEHRGASRLFVMDRKSGVNTQAS---FKDIGSFLPEGALLVANNSR 88
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRV------------SPNSWSVYARPSKVIKKGD 113
V+ A++ G R ++ L + S R SK ++ GD
Sbjct: 89 VLPARMLGRR-----PTGGKVEFLLLTPLPLVQPQTGTDGRSCAEAEGLLRASKRVRPGD 143
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
++HF D + A + G + G +L G +PLPPYI R D
Sbjct: 144 VMHFDGLDVEVLHTA------DFGRCAVRMHWKG-DLAGLFLRQGHLPLPPYIRRPDGED 196
Query: 174 ARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
YQT Y++ GSVAAPTAGLHFT L + L G VTL+VG GTF PV+
Sbjct: 197 DHS--RYQTVYSRQDRLGSVAAPTAGLHFTPELTASLQEQGFGWAEVTLYVGYGTFSPVR 254
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
ED H MH E I AQA+N K +G +V+VGTTS R+LE A G I P++G
Sbjct: 255 AEDIRTHTMHREYMEITEQAAQAINDAKRQGRPVVTVGTTSTRVLEGAWAACGEIRPFTG 314
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+T+IFI PGYRF D +++NFHLP+S+LLM++SAF G E+T + Y A++ YRF+SYG
Sbjct: 315 WTDIFIYPGYRFNVADHIITNFHLPESSLLMMISAFAGREKTLQAYSQAVAAGYRFFSYG 374
Query: 352 DTSLLF 357
D L+
Sbjct: 375 DAMLIL 380
>gi|320334668|ref|YP_004171379.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Deinococcus
maricopensis DSM 21211]
gi|319755957|gb|ADV67714.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Deinococcus
maricopensis DSM 21211]
Length = 354
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 146/352 (41%), Positives = 201/352 (57%), Gaps = 23/352 (6%)
Query: 7 DFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
+FDLPP RIA PRD++RLMVV I + DLP L + D +VFN ++V
Sbjct: 24 NFDLPPERIAQTGAEPRDTSRLMVV-----GESGIDHRIFRDLPDLLRTGDLLVFNESRV 78
Query: 67 ITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRL 126
I A++ + + L N WS Y + +K + G L F +
Sbjct: 79 IPARIIARK-----PTGGAVETLLLREEEANVWSAYLKGAK--RAGRDLLF------GSV 125
Query: 127 EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK 186
A VI G LL FS +++ + +G +PLPPYI DA YQT YA+
Sbjct: 126 HAEVIGTLEDGARLLRFS---EDIKPHLDALGRLPLPPYIDAGE-DDAVWQDRYQTVYAR 181
Query: 187 IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
GSVAAPTAGLHFT LL+RL ++G+ FVTLHVGAGTF P+ +H MH+E
Sbjct: 182 TAGSVAAPTAGLHFTPELLARLQAMGVGTAFVTLHVGAGTFKPISG-SVAEHTMHAERYT 240
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
+ + TA A+N+ + G R+++VGTT++R LE+A +G ++P G T IFITPG+ +R
Sbjct: 241 VTSDTADAINAARREGRRVIAVGTTTVRALESAADVNGTVHPGDGDTRIFITPGHAWRVP 300
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
D+L++N HLP STLL+LV+AF G + + YQ A+ H YRFYS GD LL +
Sbjct: 301 DLLITNLHLPNSTLLLLVAAFAGEDRIRAAYQAALDHPYRFYSLGDAMLLQR 352
>gi|42527952|ref|NP_973050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
denticola ATCC 35405]
gi|81570134|sp|Q73JQ7|QUEA_TREDE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|41818997|gb|AAS12969.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
denticola ATCC 35405]
Length = 347
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 135/358 (37%), Positives = 191/358 (53%), Gaps = 12/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ KEF+FDLP IA P R RL+++ + D L ++LP L N +V
Sbjct: 1 MLTKEFNFDLPEELIAQSPSEKRGGDRLLILDKQSG---KLEDRLFTELPEILPKNALMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV A++ + + + + W V A+ +K K G F
Sbjct: 58 FNNSKVRHARIYAKSKTNAVC--EFLMINPMRDSDGSLWQVMAKKAKRQKPGKTFLFEDG 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+E+ + + + I + G +PLPPYI R D Y
Sbjct: 116 TEAEIIESEIPLESEFRCMKFNRVIDDE----WLDKYGHMPLPPYI--HRKDTQEDADRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+I GS+AAPTAGLHFT +LS++ GI + +VTLHVG GTF+PV+ E +DH M
Sbjct: 170 QTVYAEIYGSIAAPTAGLHFTQEVLSKIRDKGIDIEYVTLHVGLGTFLPVRAEKIEDHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-NPWSGFTNIFITP 299
H+E FI TAQA+ K G I++VGTT++R LE+A E + T+IFI P
Sbjct: 230 HTEHFFISEKTAQAVEKAKKEGRPIIAVGTTTVRTLESAWDEKRKELKWGNQSTDIFIYP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L +NFH P+S+L+MLVSA G E K Y+HA+ Y+F+SYGD L+
Sbjct: 290 SYKFKLIDKLFTNFHTPESSLVMLVSALAGKENIFKAYRHAVEEKYKFFSYGDAMLIL 347
>gi|94985052|ref|YP_604416.1| queuosine biosynthesis protein [Deinococcus geothermalis DSM 11300]
gi|94555333|gb|ABF45247.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Deinococcus geothermalis DSM 11300]
Length = 366
Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 143/352 (40%), Positives = 194/352 (55%), Gaps = 19/352 (5%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
FDLPP RIA PRD++RLMVV I+ + +LP L + D +VFN ++VI
Sbjct: 27 FDLPPERIAQTGAEPRDASRLMVVGRE-----HIAHRIFRELPELLRAGDVLVFNESRVI 81
Query: 68 TAQLNGVRF-CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRL 126
A++ + +I L N WS Y +P+K + G L +
Sbjct: 82 PARVLARKPVTEGGFGGGQIEVLLLREEEQNVWSAYLKPAK--RAGKELWL------GQH 133
Query: 127 EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK 186
A V G LL F +++ + +G +PLPPYI D R YQT YA+
Sbjct: 134 RAEVTGVLPDGARLLRFDH---DIKPHLDEIGRLPLPPYIQAGDS-DERWRERYQTVYAR 189
Query: 187 IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
GSVAAPTAGLHFT LL+RL ++G++ + +TLHVGAGTF P+ DH+MH+E
Sbjct: 190 EPGSVAAPTAGLHFTPELLARLDALGVERHALTLHVGAGTFRPI-TGSVADHVMHAERYA 248
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
I A A+N K G R+++VGTT++R LE++ DG +NP G T IFI PG R
Sbjct: 249 ISETVAAAINRAKVEGRRVIAVGTTTVRALESSANADGTVNPGEGETRIFILPGVPVRVP 308
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
D+L++N HLP STLL+LV+AF G E + Y A+ YRFYS GD LL +
Sbjct: 309 DLLITNLHLPGSTLLLLVAAFAGEERIRAAYDAALVGDYRFYSLGDAMLLER 360
>gi|320537237|ref|ZP_08037199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
phagedenis F0421]
gi|320145912|gb|EFW37566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
phagedenis F0421]
Length = 348
Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 184/357 (51%), Gaps = 11/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FDF LP IA +P R +L+++ SD S+LP L N +V
Sbjct: 1 MNTKDFDFYLPEHLIAQKPSGKRGEDKLLLLDKKTGA---FSDRQFSELPDILPPNALMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV A++ + E + W + +K + G F
Sbjct: 58 FNNSKVRRARVYAKSKDSGAQTE---FLLIDSLDDGRLWQAMTKKAKRQRIGKTFLFDEG 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+E + L F+ + + G IPLPPYI +R D Y
Sbjct: 115 VEAMVVEPPANTDTSAEFRWLQFNTPITD--SWLETHGHIPLPPYI--RREDTEEDASRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS+AAPTAGLHFT +L R+ + GI+ +TLHVG GTF+PV+ E ++H M
Sbjct: 171 QTVYAQTTGSIAAPTAGLHFTDEILQRIDARGIERTAITLHVGLGTFLPVRTEKIEEHRM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H+E FI TA A+ K G I++VGTTS+R LE+A D + S TNIFI P
Sbjct: 231 HTEKFFITDTTATAIEKAKREGRPIIAVGTTSVRSLESAWNPDTQRLMRGSQSTNIFIYP 290
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD+L +NFH P+STLLMLVSA G ++ Y HA+ YRF+SYGD +
Sbjct: 291 PYQFKLVDMLFTNFHTPESTLLMLVSALAGKDQILAAYAHAVEQEYRFFSYGDAMFI 347
>gi|256827668|ref|YP_003151627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cryptobacterium curtum DSM 15641]
gi|256583811|gb|ACU94945.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cryptobacterium curtum DSM 15641]
Length = 358
Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 122/364 (33%), Positives = 181/364 (49%), Gaps = 15/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP RIA P RD +++V+ + D + D+ ++N D +V
Sbjct: 1 MKTSDFDYDLPEERIAQEPAPIRDKCKMLVMDRITGA---LEDKIFCDIIDYINPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDILHF 117
N T+V+ A+L G + E + L N W V RP K +K G I+ F
Sbjct: 58 ANETRVLPARLLGAKRTTGGAAEVFLLRPLPHGQQNNTQSDWEVLVRPGKRLKPGAIIDF 117
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDA 174
S +G + L A ++ +G+ + +S + G PLPPYI + +
Sbjct: 118 PSTNGSTALTAEIVGFVESGKGERIARLSTEAYSTLDEALHAVGHTPLPPYIKQYVGDEE 177
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT Y+ + S AAPTAGLHFT L+ + + G + V L VG TF V +D
Sbjct: 178 M----YQTVYSNRETSAAAPTAGLHFTPELIEAIKAKGARWETVELQVGIDTFRIVDEDD 233
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGF 292
+H MH+E + A N RGGR+++VGTTS R LE+A ++
Sbjct: 234 PRNHAMHTETYTVPQRVVDACNEAHQRGGRVIAVGTTSTRSLESAWDVETHQLVARDQAQ 293
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T +F+ PG F +D L++NFH+P+STL+MLVSAF + Y+HAI + YR S+GD
Sbjct: 294 TALFLLPGSNFHVIDALITNFHVPRSTLMMLVSAFSSRDAIMAAYRHAIDNKYRMLSFGD 353
Query: 353 TSLL 356
+
Sbjct: 354 AMFI 357
>gi|257063451|ref|YP_003143123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
heliotrinireducens DSM 20476]
gi|256791104|gb|ACV21774.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
heliotrinireducens DSM 20476]
Length = 361
Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats.
Identities = 129/371 (34%), Positives = 182/371 (49%), Gaps = 26/371 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LPP RIA P RD RL+V+ ++D + D+ +L D +V
Sbjct: 1 MRTDDFDYELPPERIAQEPWPVRDECRLLVMDRKTG---EVTDRIFRDVAEYLQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--------NSWSVYARPSKVIKKG 112
N T+V+ A+L G + L W V RP + +K G
Sbjct: 58 ANETRVLPARLLGSK----RGTGGACEVFLLRERFDVEPKTTHTAVWDVLVRPGRRLKPG 113
Query: 113 D--ILHFFSQDGQSRLEATVIDKWNT---GEILLVFSISGIELERQISLVGTIPLPPYIA 167
++ F DG L A +ID + GE + S + + G PLPPYI
Sbjct: 114 TGAMVDFEGPDGNVVLSAEIIDWGSDTGKGERIARLSTPLDSFDEALHAAGHTPLPPYIK 173
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
+ YQT Y++ + S AAPTAGLHFT L+ L + G++ + V L VG TF
Sbjct: 174 GYAGDEEM----YQTVYSQAETSAAAPTAGLHFTPELIGSLKAKGVEWHTVELQVGLDTF 229
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGII 286
V +D H MH+E + A ++ +RG R+ +VGTTS+R LE+A E G +
Sbjct: 230 RVVDEDDPAQHAMHTEFYSVPQSVVDACDAAHARGNRVFAVGTTSVRSLESAFDRESGKL 289
Query: 287 NPWSGF-TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
T +FI PGY F VD L++NFH+P+STL+MLVSAF E Y+HAI Y
Sbjct: 290 RARDHEATCLFILPGYTFGVVDGLITNFHVPRSTLMMLVSAFSTRENIMAAYKHAIDSEY 349
Query: 346 RFYSYGDTSLL 356
R S+GD L+
Sbjct: 350 RMLSFGDAMLI 360
>gi|325283310|ref|YP_004255851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
proteolyticus MRP]
gi|324315119|gb|ADY26234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
proteolyticus MRP]
Length = 358
Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats.
Identities = 140/354 (39%), Positives = 198/354 (55%), Gaps = 12/354 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ F+LPP RIA PRDS+RLM V + H+ +LP L + D +VFN
Sbjct: 9 LAALHFELPPGRIAQTGAEPRDSSRLMRVPR----AGEVQHHIFRELPELLRAGDVLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++VI A++ + + +I L N WS Y +P++ + G+ L G
Sbjct: 65 QSRVIPARVMARKPKVGGQGGGQIEVMLLREEENNVWSAYLKPAR--RAGNELWLGDPAG 122
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ A V+ G LL F +++ + +G +PLPPYI D YQT
Sbjct: 123 -VQHRAEVVGVQEDGARLLRFDH---DIKPHLDDIGRLPLPPYIEAGE-DDTVWCERYQT 177
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GSVAAPTAGLHFT LL RL ++G++ + VTLHVGAGTF PV+ +H+MH+
Sbjct: 178 VYARENGSVAAPTAGLHFTPELLERLRALGVEQHAVTLHVGAGTFKPVQGA-VSEHVMHA 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I TA A+N ++ G R+V+VGTT++R LE++ G + G T IFITPG
Sbjct: 237 EQYHIPPATADAINRARAEGRRVVAVGTTTVRALESSVDGGGEVRAGKGDTRIFITPGQA 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ D+L++N HLP STL++LV+AF G+E + Y A+ H YRFYS GD LL
Sbjct: 297 VQVPDLLITNLHLPDSTLMLLVAAFAGVERIQTAYAEALRHDYRFYSLGDAMLL 350
>gi|294651474|ref|ZP_06728787.1| queuine tRNA-ribosyltransferase [Acinetobacter haemolyticus ATCC
19194]
gi|292822624|gb|EFF81514.1| queuine tRNA-ribosyltransferase [Acinetobacter haemolyticus ATCC
19194]
Length = 349
Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats.
Identities = 130/359 (36%), Positives = 190/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P+ R ++RL+ + DH +D+ L D +V
Sbjct: 6 MQLSDFSFDLPDELIAPYPLESRSASRLLHID----AQGHYHDHAFTDILDLLEEGDLLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + ++ + + S K G L+
Sbjct: 62 LNDTKVMKARLKGKRA-----TGGAIEVLVERILDTHTAHCHIKSSNSPKAGAELYIGED 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ + ++ FS + + G +P+PPY R + D Y
Sbjct: 117 AVPVTVQGR-----HENLFVVKFSQPILSVL---DQYGQLPIPPYFN--REAEEIDTERY 166
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF +LL +L + G++ FVTLHVGAGTFMPV+ D +H
Sbjct: 167 QTVFHDPEKIASVAAPTASLHFDQSLLEKLATKGVQKTFVTLHVGAGTFMPVRTTDITNH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
IMHSE + T + + K+RG ++++VGTT+ R LE+A + G I W+G T IFI
Sbjct: 227 IMHSEWCDVPQATIDLILATKARGNKVIAVGTTATRALESAAQANQGQIAAWTGDTQIFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 287 YPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYKHAVEQRYRFFSYGDAMLI 345
>gi|213427838|ref|ZP_03360588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
Length = 331
Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats.
Identities = 133/346 (38%), Positives = 192/346 (55%), Gaps = 17/346 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQK 331
>gi|325474824|gb|EGC78010.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
denticola F0402]
Length = 347
Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats.
Identities = 135/358 (37%), Positives = 191/358 (53%), Gaps = 12/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ KEF+FDLP IA P R RL+++ + D L ++LP L N +V
Sbjct: 1 MLTKEFNFDLPEELIAQSPSEKRGGDRLLILDKQSG---KLEDRLFTELPEILPKNALMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV A++ + + + + W V A+ +K K G F
Sbjct: 58 FNNSKVRHARIYAKSKTNAVC--EFLMINPMKDSDGSLWQVMAKKAKRQKPGKTFLFEDG 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+E+ + + + I + G +PLPPYI R + D Y
Sbjct: 116 TEAEIIESEIPLESEFRCMKFNRVIDDE----WLDKYGHMPLPPYI--HRKDNQEDADRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+I GS+AAPTAGLHFT +LS++ GI + +VTLHVG GTF+PV+ E +DH M
Sbjct: 170 QTVYAEIYGSIAAPTAGLHFTQEVLSKIRDKGIDIEYVTLHVGLGTFLPVRAEKIEDHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-NPWSGFTNIFITP 299
H E FI TAQA+ K G I++VGTT++R LE+A E + T+IFI P
Sbjct: 230 HREHFFISEKTAQAVEKAKKEGRPIIAVGTTTVRTLESAWDETRKELKRGNQSTDIFIYP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L +NFH P+S+L+MLVSA G E K Y+HA+ Y+F+SYGD L+
Sbjct: 290 SYKFKLIDKLFTNFHTPESSLVMLVSALAGKENIFKAYRHAVEEKYKFFSYGDAMLIL 347
>gi|269216137|ref|ZP_06159991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
exigua ATCC 700122]
gi|269130396|gb|EEZ61474.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
exigua ATCC 700122]
Length = 359
Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats.
Identities = 133/368 (36%), Positives = 186/368 (50%), Gaps = 24/368 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP IA P RD+ RL+V+ ++D + D+ +LN D +V
Sbjct: 1 MRTDDFDYDLPERCIAQEPAPVRDACRLLVMDRETGA---LADRIFRDIEGYLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--------NSWSVYARPSKVIKKG 112
N+T+V+ A+L G + E L W V RP K +K G
Sbjct: 58 ANSTRVMPARLLGHK----RTTGGEAEVFLLRERFDVEPKADASAVWDVLVRPGKRLKPG 113
Query: 113 DILHFFSQDGQSRLEATVIDKW---NTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
I+ F +G L A +ID GE + S L+ + VG PLPPYI
Sbjct: 114 AIVDFVDGEGAVALSAEIIDWGLEGGKGERIARLSTERPSLDEALHAVGRTPLPPYIKHY 173
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
+ YQT Y+ + S AAPTAGLHFT L+ RL + G+ V L VG TF
Sbjct: 174 AGDEEM----YQTVYSHDEKSAAAPTAGLHFTPELIERLRAKGVAWKTVELEVGLDTFRI 229
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINP 288
V +D H MH+E + A ++ +RGGR+ +VGTTS+R LE+A E G ++
Sbjct: 230 VDEDDPTQHTMHTEHYTVSQEVVDACDACHARGGRVFAVGTTSVRSLESAFDRETGRLHA 289
Query: 289 WSGF-TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T+++I PG+ F VD L++NFH+P+STL+MLVSAF E + Y+HAI YR
Sbjct: 290 RDHEATSLYILPGFEFGVVDGLITNFHVPRSTLMMLVSAFSTCENVRAAYRHAIESGYRM 349
Query: 348 YSYGDTSL 355
S+GD L
Sbjct: 350 LSFGDAML 357
>gi|119713610|gb|ABL97661.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [uncultured
marine bacterium EB0_39H12]
Length = 341
Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats.
Identities = 129/361 (35%), Positives = 197/361 (54%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++++F+LP + IA P R S+RL++ + D SDL L + D +V
Sbjct: 1 MDIEDYNFELPEALIAKEPKSERSSSRLLI------AEDRLIDKKFSDLIDSLGNGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV A+L + ++ + ++ N+ + ++ +++ + L Q
Sbjct: 55 INDTKVFKARLEAQKVS-----GGKVELLIERKIDANNALALTKSNRPLRESERL----Q 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A +I K + L +++ + GT+PLPPYI R D D Y
Sbjct: 106 VTNTNIFADIIKK----DGYLSLIQFSEDIDDILDGFGTVPLPPYI--DRKPDDNDEARY 159
Query: 181 QTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT YA SVAAPTAGLHF + LL R+ G+ + +TL++G GTF P+K D H
Sbjct: 160 QTVYADANNMNSVAAPTAGLHFDNELLERIKDKGVNIASITLNIGIGTFKPIKQNDVRKH 219
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
IMHSE ++ A +N RI VGTTSLR LE+ ++ I + G T+IFI
Sbjct: 220 IMHSEKIYLSESNANIINEALLSNSRIFCVGTTSLRCLESIYSKFDEIKSYEGETDIFIY 279
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ D L++NFHLPK+TLL+LVSAF G++ + Y+HAI YRF+SYGD LL +
Sbjct: 280 PGFKFKVADYLITNFHLPKTTLLLLVSAFSGLDRIQAAYKHAIEKEYRFFSYGDAMLLKR 339
Query: 359 K 359
+
Sbjct: 340 Q 340
>gi|21674139|ref|NP_662204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
gi|21647298|gb|AAM72546.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
Length = 346
Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats.
Identities = 121/359 (33%), Positives = 187/359 (52%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP +RIA PRD+ +LMV++ I + +D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTRIADHLESPRDACKLMVLNRRK---KEIEHKVFTDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 VNNSRVFPAKIFGQK----EKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I++ + + +G +PLPPY R D
Sbjct: 113 ----EDDVVAEVVDNTTSRGRTIRFLNPDIDVFQMVEKIGHVPLPPYFT--RKPKETDRT 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AGLHFT LL +L IG+K+ +TLH TF ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGLHFTIPLLQQLQKIGVKILPLTLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K R+ VGTT+ R LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKVNKSGRVFVVGTTTCRALEANATVDGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y F+ D L++NF P++TL+M+VSAF + Y+ A+ + YRF +YGD L+
Sbjct: 287 YPPYNFKVTDALITNFQQPETTLMMVVSAFAEHRLLMEAYKTALKNNYRFLAYGDAMLI 345
>gi|189499978|ref|YP_001959448.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
gi|189495419|gb|ACE03967.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
Length = 346
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 121/359 (33%), Positives = 187/359 (52%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +RIA RP R+ +LMV++ I SD+ ++ D +V
Sbjct: 1 MRLSNFRFNLPKTRIADRPEENREDCKLMVLNRRKKD---IDHKAFSDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKIFGQK----EKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q + A V+D + + F I++ + +GT+PLPPY R D D
Sbjct: 113 ----QDDVVAEVVDNTTSRGRTIRFLNPEIDVFDLVEKIGTVPLPPYF--SRKPDDADRQ 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AGLHFT +L + G+K+ +TLH +F ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGLHFTMPILEEIKKKGVKILQITLHPSLSSFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K R+++VGTT+ R+LE T +G I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKLNKSGRVIAVGTTTCRVLEANATVEGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ YRF +YGD +
Sbjct: 287 YPPYQFKVTDGLIANFQQPETTLLMMVSAFAEYRLLMDAYKIALKKDYRFLAYGDAMFI 345
>gi|320104844|ref|YP_004180435.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Isosphaera
pallida ATCC 43644]
gi|319752126|gb|ADV63886.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Isosphaera
pallida ATCC 43644]
Length = 375
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 140/379 (36%), Positives = 192/379 (50%), Gaps = 28/379 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LPP RIA P RD ARLMVV ++ H +LP L S D +V
Sbjct: 1 MHISEFDFELPPDRIAQYPAERRDHARLMVVDRRAGT---MTHHRFYELPDLLTSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--- 117
N +KV+ A+L G R R E + S W + A+ + G+ +
Sbjct: 58 RNTSKVVPARLLGRREATGGRWEGLF-VRAEVDASGLVWELLAQTRGHPRPGEWIVINRR 116
Query: 118 --------FSQDGQSRLEATVIDKWNTGEILLVFSISG------IELERQISLVGTIPLP 163
+ L ++ + G + + + G +PLP
Sbjct: 117 SDLELPTGSTDHEHEGLRLQLVGRGPGGTWKARLHLPDGPATDPDSVWTLLERFGEVPLP 176
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PYI R D YQTTYA+ GSVAAPTAGLHFT L L G+ V +TLHVG
Sbjct: 177 PYIRHGREGT-GDRDRYQTTYAQTPGSVAAPTAGLHFTPELFETLERRGVGVADLTLHVG 235
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--- 280
GTF P+ VE + H MH+E + TA+ LN ++RGGRIV+VGTTS R LE
Sbjct: 236 IGTFRPLNVETIEAHHMHAETAHLPLATARRLNECRARGGRIVAVGTTSARTLEHVAHQV 295
Query: 281 -TEDGI--INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
T+ G + G +++I PG+ F +D L++NFHLP+S+L++LVSA G+E + Y
Sbjct: 296 VTKTGTVGFESFEGDVDLYIKPGHEFLGLDALITNFHLPRSSLIVLVSALAGVELIRDAY 355
Query: 338 QHAISHAYRFYSYGDTSLL 356
+ AI+ YRFYSYGD +
Sbjct: 356 RVAIAEGYRFYSYGDAMFI 374
>gi|291288355|ref|YP_003505171.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Denitrovibrio acetiphilus DSM 12809]
gi|290885515|gb|ADD69215.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Denitrovibrio acetiphilus DSM 12809]
Length = 341
Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 122/354 (34%), Positives = 197/354 (55%), Gaps = 24/354 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++DFDLP IA P R +++L+VV+ + D + +D+ ++ N +V N
Sbjct: 8 ISDYDFDLPEELIAQYPAEKRGTSKLLVVNGE-----ALYDKIFTDIVDLIDENSFLVIN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKV+ A+L G + ++ + + S + + +K+G +++
Sbjct: 63 TTKVMKARLYGTK-----PTGGQVEILVLEKTSERICTAITK--GKVKEGTVVNIPP--- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
A + + + G ++ F ++ + G +PLPPYI R +D YQT
Sbjct: 113 ---FRAVITEILDDGSRVIEFDT---DVSDVMDKCGHMPLPPYIT--REDTKKDTDRYQT 164
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K +GSVAAPTAGLHFT +++ L + GI+V VTL++G GTF PVK + +DH MH+
Sbjct: 165 IYSKDEGSVAAPTAGLHFTPEIMNALKAKGIEVLEVTLNIGIGTFRPVKADYLEDHDMHT 224
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E +I T+ +NS+ G ++V+VGTT++R LE+A E+G + G T +FI PGY
Sbjct: 225 EKYYISEETSDRINSLLKEGKKLVAVGTTAVRALESAA-ENGEVQAGYGETKLFIKPGYD 283
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ + L++NFHLPKSTL +LVS G Y+HA ++ Y+F+SYGD +
Sbjct: 284 FKVISSLITNFHLPKSTLFVLVSQLAGRRNMLNAYEHAKANGYKFFSYGDAMFI 337
>gi|307718815|ref|YP_003874347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Spirochaeta thermophila DSM 6192]
gi|306532540|gb|ADN02074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Spirochaeta thermophila DSM 6192]
Length = 351
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 130/357 (36%), Positives = 181/357 (50%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+F FDLP IA P R+ ARLMVVH I V +LP L +V
Sbjct: 15 MKLKDFYFDLPEELIAQHPAQRREDARLMVVHRETG---RIEHAHVRELPWILPP-SCLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V ++L R ++ L V P+ W ++ + G +
Sbjct: 71 FNDTRVRKSRLLATR----RDSGGKVEILLLEEVEPSLWKAVVSRARRQRPGVVYELPGG 126
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G L+ S E+ G +PLPPYI R + Y
Sbjct: 127 REAEIVGME------EGLRLVRISPPIDEVYL--DRHGHVPLPPYIKRSDLPED--EERY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT L+ L S F+TLHVG GTF PV+ E+ ++H M
Sbjct: 177 QTVFARHPGSAAAPTAGLHFTPALMDELKSRHTV-TFLTLHVGLGTFQPVRTENVEEHRM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E +I TA+ + KS+ + +VGTT+ R LE+A E G + T+++I PG
Sbjct: 236 HKERFYIPEETARVIEGAKSQHIPVCAVGTTTTRALESAW-EHGRLKRGWQETSLYIYPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y FR +D L +NFH P S+L++LVSAF G + + Y+ AI H YRF+SYGD L+
Sbjct: 295 YTFRVIDRLFTNFHTPGSSLVLLVSAFLGKDLLLEAYRKAIEHRYRFFSYGDAMLII 351
>gi|119357442|ref|YP_912086.1| queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
gi|119354791|gb|ABL65662.1| Queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
Length = 346
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 118/360 (32%), Positives = 189/360 (52%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA +P PRDS RLMV++ I D+ + D +V
Sbjct: 1 MRLSNFRYILPKTKIAEKPASPRDSCRLMVLNRRK---KEIDHKNFEDISGYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ ++ W V P++ ++ G+ ++F
Sbjct: 58 VNNSRVFPAKIFGQK----EKTDAKIEVFLLRVLNKDAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V+D + + F +++ + +G +PLPPY R D
Sbjct: 113 ----DEDIVAEVVDNTTSRGRTIRFLNPEVDVFSLVERIGHVPLPPYFT--RLPVDSDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AG+HFT LL ++ +G+K+ +TLH TF ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGMHFTMPLLQKIQKMGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K R+++VGT++ R+LE T DG I SG+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKINKTGRVIAVGTSTCRVLEANATVDGKIKFGSGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ Y+F +YGD ++
Sbjct: 287 YPPYQFKVTDALITNFQQPETTLLMVVSAFAEHRLLMDAYKVALKSEYQFLAYGDAMFIY 346
>gi|332181217|gb|AEE16905.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Treponema
brennaborense DSM 12168]
Length = 345
Score = 350 bits (897), Expect = 2e-94, Method: Composition-based stats.
Identities = 137/358 (38%), Positives = 188/358 (52%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F FDLP IA P R +LMV+ + L+ DLP + N +V
Sbjct: 1 MRTKDFYFDLPEELIAQHPSGIRGQDKLMVLDKATGD---VRHQLMDDLPDLVPQNALMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN++V +++ G++ +E ++P W + +K + G+ F
Sbjct: 58 FNNSRVRRSRVYGIK----ENTGRETEFLFLTPLAPTLWKTMVKNAKKQRPGNRYRFP-- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + T L F+ E + G IPLPPYI R D Y
Sbjct: 112 DGSVGVITENPADAGTEFRTLSFTQPIEE--QWFERNGHIPLPPYIK--RKDTEEDSERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q YA+ GS A PTAGLHFT +L +L S GI+ FVTLHVG GTF+PV+ E +DH M
Sbjct: 168 QNIYARETGSAACPTAGLHFTERMLEKLDSRGIRRTFVTLHVGLGTFLPVRAERIEDHTM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H E + TA+ +N+ K G +++VGTTS+R LE+A + P T IF+ P
Sbjct: 228 HEETYSVSRETAELVNTAKKEGRPVLAVGTTSVRTLESAWDPVKSELIPGINSTRIFMYP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRF VD + +NFH P+STLLMLVSAF G E Y++A++H YRF+SYGD L+
Sbjct: 288 GYRFNVVDKMFTNFHTPESTLLMLVSAFAGKEHIMDAYRNAVAHRYRFFSYGDAMLIL 345
>gi|313673199|ref|YP_004051310.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939955|gb|ADR19147.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Calditerrivibrio nitroreducens DSM 19672]
Length = 339
Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats.
Identities = 127/356 (35%), Positives = 192/356 (53%), Gaps = 20/356 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++K++DF+LP IA P R+ + LMVV + + + ++ +L +V
Sbjct: 4 LLKDYDFELPEELIAQYPAEKREESNLMVVDRSKNDFFI---TKFKNIVDYLPEKSFLVV 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ +++ + + ++ + + R +K GDIL
Sbjct: 61 NNTKVLKSRIYAQKIS-----GGRVEVFFIEKIDDHIFKAMTR--GRLKDGDILKINDSI 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
L + + L + +SGI++ + G IPLPPYI R D+ D YQ
Sbjct: 114 TLKIL-------GSCEDNLRIVELSGIDIYNLLDKFGHIPLPPYIK--REDDSHDETRYQ 164
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ GSVAAPTAGLHFT L+ R+ ++ +TL+VG GTF PVK E+ +H MH
Sbjct: 165 TVYAQKPGSVAAPTAGLHFTEELIERIRQK-HEILEITLNVGIGTFRPVKTENIQEHQMH 223
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE FI + + +N +KS G +++SVGTT+ R LE + + + T+IFI GY
Sbjct: 224 SEKFFIPEESFKRINLLKSNGHKLISVGTTTTRCLEAVAKDGLLQSYGESETDIFIKSGY 283
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F+ +D L++NFHLPKSTL +LVS F G++ KK Y +AI RF+SYGD L+
Sbjct: 284 KFQIIDHLVTNFHLPKSTLFILVSTFAGLDLMKKAYAYAIEKRMRFFSYGDAMLII 339
>gi|194334270|ref|YP_002016130.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
gi|194312088|gb|ACF46483.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
Length = 346
Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats.
Identities = 125/359 (34%), Positives = 190/359 (52%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA RPV PRDS++LMV++ I D+ +F D ++
Sbjct: 1 MRLSNFRYSLPKTKIADRPVSPRDSSKLMVLNRRK---KEIEHKTFGDIVSFFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKIFGQK----EKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q + A V+D + + F I++ + +GT+PLPPY R DA D
Sbjct: 113 ----QDDVVAEVVDNTTSRGRTIRFLNPEIDVFDLVEKIGTVPLPPYF--SRKPDAGDRE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AGLHFT LL + G+K+ +TLH +F ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGLHFTMPLLEAIKKKGVKILPITLHPSLSSFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K RI++VGTT+ R+LE T +G I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEVNETKLNKSGRIIAVGTTTCRVLEANATVEGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ YRF +YGD +
Sbjct: 287 YPPYQFKVTDALVANFQQPETTLLMMVSAFAEHRFLMDSYKTAMKENYRFLAYGDAMFI 345
>gi|195952881|ref|YP_002121171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Hydrogenobaculum sp. Y04AAS1]
gi|229892798|sp|B4U7T2|QUEA_HYDS0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|195932493|gb|ACG57193.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Hydrogenobaculum sp. Y04AAS1]
Length = 343
Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 190/363 (52%), Gaps = 26/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FD+DLP IA PV PR SA+LMV+ S I+ + FL D ++
Sbjct: 1 MDISLFDYDLPEELIAKYPVNPRHSAKLMVLDRKSSN---ITHSTFWHIDEFLEEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+L G + N + L + W K IK G ++
Sbjct: 58 FNDTKVLPARLLGKKKGIENSN---VEILLLRHLENEKWEALV-GGKNIKPGLVIEISYD 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA V + + L++ I+ G IP+PPY+ R + D Y
Sbjct: 114 -----FEAIVESQIEKSKFLVLLKAKNQNQIEAINKYGKIPIPPYL--GRDEEPIDKEFY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK + SVAAPTA LHF++ LL +L + + FVTLHV GTF PV V++ ++H +
Sbjct: 167 QTVFAKKEFSVAAPTASLHFSNELLEKLKKK-VNIDFVTLHVSYGTFKPVTVQNIEEHKV 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + + + K R+++VGTT R LETA I P+ GFT+++I PG
Sbjct: 226 DEEYIEVSESLIKNIKKTKKMCKRVIAVGTTVTRALETA-----IDKPYFGFTDLYIKPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAISHAYRFYSYGDTS 354
++F+ +D ++NFHLPKS+LL+LVSAFC G E K Y+ A+ H YRFYSYGD
Sbjct: 281 FKFKVLDGFITNFHLPKSSLLILVSAFCNEENLDGREFILKSYKEAVKHKYRFYSYGDGM 340
Query: 355 LLF 357
L+
Sbjct: 341 LIL 343
>gi|71065959|ref|YP_264686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychrobacter arcticus 273-4]
gi|91207397|sp|Q4FRV6|QUEA_PSYA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71038944|gb|AAZ19252.1| probable S-adenosylmethionine:tRNA -ribosyltransferase-isomerase
[Psychrobacter arcticus 273-4]
Length = 403
Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats.
Identities = 136/384 (35%), Positives = 195/384 (50%), Gaps = 38/384 (9%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V ++D++LP IA P+ R +++L+ + P + + D L S+LP LN+ D IVFN
Sbjct: 29 VDDYDYELPDQLIARYPLAQRSASKLLYL-PTNNANSQVEDKLFSELPDILNAGDLIVFN 87
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRV---------------------SPNSWSV 101
+TKV+ A+L G + V +
Sbjct: 88 DTKVMKARLFGQKDTGGKIEVLIERLVSLSDVNSAYLDEIIANSKTIDTTIIAEKHIALC 147
Query: 102 YARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIP 161
+ + SK +K G L + +L F + + G +P
Sbjct: 148 HIKASKALKLGQGLVLADGHMTGIMIGR-----QENLFILAFDTP---ILPDLEQYGELP 199
Query: 162 LPPYIARKRPIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PPY R DA D YQT + SVAAPTA LHF +L +L + GI+ FVT
Sbjct: 200 IPPYFE--RHADATDNTRYQTVFHDPAKLASVAAPTASLHFDDIVLEKLAAKGIQTAFVT 257
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
LHVGAGTF PVK ++ +H MHSE + TA+ +N + G +++++GTT R+LETA
Sbjct: 258 LHVGAGTFAPVKTDNLLNHTMHSEYAHLPQATAELINQTHANGKQVIAIGTTVTRVLETA 317
Query: 280 TTEDGIINP----WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKK 335
+ + WSG T+IFI PG++F VD L++NFHLPKSTLLMLVSAF + ++
Sbjct: 318 YQQTAVDGQSLSGWSGDTDIFIYPGFKFGVVDKLLTNFHLPKSTLLMLVSAFATKKSIEQ 377
Query: 336 MYQHAISHAYRFYSYGDTSLLFQK 359
YQHAI YRF+SYGD LL ++
Sbjct: 378 AYQHAIKSQYRFFSYGDAMLLDKQ 401
>gi|189346056|ref|YP_001942585.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
gi|238692192|sp|B3EGG9|QUEA_CHLL2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189340203|gb|ACD89606.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
Length = 343
Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats.
Identities = 127/361 (35%), Positives = 182/361 (50%), Gaps = 22/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA P R + RL+V+ P + L FL D ++
Sbjct: 1 MKVSDFDYTLPEDMIARYPPAERGTTRLLVLDPATGET---EHSRYAHLADFLKPGDLLL 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A++ + + I L + +KKGD L
Sbjct: 58 LNNSKVVRARMFASK-----KTGASIELMLLEKHEG--VQNLVLYRGRLKKGDRLI---- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ E ++++ + + + G +L +P+PPY+ R +A D Y
Sbjct: 107 ---AHSEELLVEEITGQGVARLSASDGSDLPHLFERHAEVPIPPYLK--REAEAVDAERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GSVAAPTA L+ T+ LL+ L GI VTLHVG GTF+P++VE ++H+M
Sbjct: 162 QTVFAEQPGSVAAPTASLNMTAGLLAELGQKGIDTATVTLHVGLGTFLPIRVESFEEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI---INPWSGFTNIFI 297
H E I T + K+ GGR+V+VGTT R LE A + P SG +IFI
Sbjct: 222 HREYYSIPFRTIDKIRRTKAGGGRVVAVGTTVTRALEHAAGSSCWGTSVAPASGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRFR +D L++NFH P+ST+LML +AF G + Y AI YRF SYGD+ L+
Sbjct: 282 YPGYRFRVIDALLTNFHAPRSTVLMLTAAFAGQQNLLSAYHEAIEKQYRFLSYGDSMLIR 341
Query: 358 Q 358
Sbjct: 342 P 342
>gi|189347014|ref|YP_001943543.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
gi|189341161|gb|ACD90564.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
Length = 346
Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats.
Identities = 120/359 (33%), Positives = 186/359 (51%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA PV PRDS +LMV++ I + D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTKIADHPVSPRDSCKLMVLNRRK---KEIEHKVFEDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L W V P++ ++ G+ ++F
Sbjct: 58 VNNSRVFPAKIFGQK----EKTDAKIEVFLLRVLNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V+D + + F I++ + +G +PLPPY R D
Sbjct: 113 ----DEDVVAEVVDNTTSRGRTIRFLNPEIDVFSLVERIGHVPLPPYFT--RKPKETDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT YA G+V AP AGLHFT LL ++ IG+K+ +TLH TF ++VED H
Sbjct: 167 NYQTVYASQTGAVVAPMAGLHFTMPLLQKIQKIGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K R+++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKINKTGRVIAVGTTTCRVLEANATVDGKIKFGRGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF + Y+ A+ Y+F +YGD +
Sbjct: 287 YPPYQFKVTDALLTNFQQPETTLLMVVSAFAEHRLLMEAYKTAMKSDYQFLAYGDAMFI 345
>gi|121603236|ref|YP_980565.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polaromonas naphthalenivorans CJ2]
gi|120592205|gb|ABM35644.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polaromonas naphthalenivorans CJ2]
Length = 352
Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 191/363 (52%), Gaps = 20/363 (5%)
Query: 1 MM----VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M + +FDF LP IA P R ++RL+ I+D +DLP L
Sbjct: 1 MKTTFSLSDFDFTLPDELIAQHPAAERSASRLL-----DGRGDAIADRRFADLPDLLLPG 55
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+TKV+ A+L G + + + + + + SK G +L
Sbjct: 56 DLLVFNDTKVVKARLFGQKLSGGRLELLIERVLSPHLDAGHEVAAHMKVSKKPLPGAMLQ 115
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
AT++ +W L + ++ G +PLPPYI D
Sbjct: 116 M-----DGGFTATLLGRWPEAHGPLYRFRLSSDPYALMAQHGHVPLPPYITHTDSADD-- 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK G+VAAPTA LHF +L +L + GI VTLHVGAGTF PVK E
Sbjct: 169 EQRYQTVFAKNPGAVAAPTAALHFDEAMLEKLQARGIARASVTLHVGAGTFQPVKTETIA 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH E + T +A+ + K+RGGR+V+VGTT++R LE+A P TNIF
Sbjct: 229 EHHMHFERFDVPQATHEAIAACKARGGRVVAVGTTTVRALESAAK----FGPDCCDTNIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG+ F+ VD+L++NFHLPKSTL+MLVSAF G +Y+HAI YRF+SYGD LL
Sbjct: 285 ITPGFDFKVVDVLLTNFHLPKSTLMMLVSAFSGHGHIMALYRHAIEARYRFFSYGDAMLL 344
Query: 357 FQK 359
++
Sbjct: 345 ARQ 347
>gi|281357780|ref|ZP_06244266.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Victivallis
vadensis ATCC BAA-548]
gi|281315727|gb|EFA99754.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Victivallis
vadensis ATCC BAA-548]
Length = 354
Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 189/356 (53%), Gaps = 6/356 (1%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
FD++LP IA P RD +R+MV++ ++ S + +L DA+++N
Sbjct: 4 TALFDYELPEELIAQHPAARRDGSRMMVLNRKSGECVI---RPFSAIVDYLEPGDALIYN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ ++ + + E+ + W+ +P K G DG
Sbjct: 61 DTRVLRGRMYARKNSDPAGAKFELLLVEALDSERRRWNAMLKPGKRALPGVTAGLLDNDG 120
Query: 123 QSRLEAT-VIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ G+ S + +R G IPLPPYI R + D YQ
Sbjct: 121 SINSDGDSFCVIGRNGDGTFEIEFSTTDSDRLQQRYGHIPLPPYI--SRGDENADAERYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ +G+VAAPTAGLHFT +L+ L + G+ VTLHVG GTF PV VE+ ++H MH
Sbjct: 179 TVYAQKEGAVAAPTAGLHFTPEILAELKARGVGEAAVTLHVGPGTFKPVSVENAEEHQMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE F+ TA+ +NS + G ++++VGTT++R+LE+ T DG ++ G T IF+ P
Sbjct: 239 SEEYFLTPETAELVNSTRRTGHKVLAVGTTTVRVLESCVTPDGTVHAGHGKTRIFLYPPK 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
A D+L++NFHLPKSTLLMLVS FC E+ YQ AI RF+SYGD LL
Sbjct: 299 PVLAEDMLLTNFHLPKSTLLMLVSCFCDREKVLAAYQVAIRERMRFFSYGDCMLLI 354
>gi|226356464|ref|YP_002786204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
deserti VCD115]
gi|226318454|gb|ACO46450.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
(Queuosine biosynthesis protein queA) [Deinococcus
deserti VCD115]
Length = 353
Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 194/359 (54%), Gaps = 25/359 (6%)
Query: 7 DFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
+FDLP +RIA PRDS+RLMVV ++ + +LP L D +VFN ++V
Sbjct: 14 NFDLPDNRIAQTGAEPRDSSRLMVV------GETLAHRVFHELPELLQPGDLLVFNESRV 67
Query: 67 ITAQLNGVRFCHINRREKEISCTLHMR-----VSPNSWSVYARPSKVIKKGDILHFFSQD 121
I A++ + ++ L + P+ WS Y +P++ + G+ L
Sbjct: 68 IPARVMARKPLVNGLGGGQVEVLLLREEETLDLGPHVWSAYLKPAR--RAGNELWL---- 121
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
A V+ + G LL F G +++ + +G +PLPPYI D YQ
Sbjct: 122 --GEHRAEVVGQLEDGARLLRF---GYDIKPHLDEIGRLPLPPYI-DAGSSDEVWRERYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ GSVAAPTAGLHFT LLSRL + G++ VTLHVGAGTF P+ DH+MH
Sbjct: 176 TVYAREPGSVAAPTAGLHFTPELLSRLDARGVERVSVTLHVGAGTFKPI-TGSVADHVMH 234
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E + A A+N + G R+V+VGTT++R LE+A + + G T IFITPG
Sbjct: 235 AERYMVSDQAADAINRARREGRRVVAVGTTTVRTLESAWDGNAV-RAGEGETRIFITPGR 293
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
D+L++N HLP STLL+LV+AF G E + Y A+S YRFYS GD LL R
Sbjct: 294 PVNVPDLLITNLHLPGSTLLLLVAAFAGEERIRAAYDAALSEGYRFYSLGDAMLLENLR 352
>gi|294101858|ref|YP_003553716.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Aminobacterium colombiense DSM 12261]
gi|293616838|gb|ADE56992.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Aminobacterium colombiense DSM 12261]
Length = 349
Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats.
Identities = 126/358 (35%), Positives = 180/358 (50%), Gaps = 21/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ + +DLP RIA P PR+ +RL+V+ N + +L FL D IV N
Sbjct: 8 IESYAYDLPEGRIAQTPASPRNHSRLLVLDKNSGT---MIHSRFYELHRFLKEGDVIVLN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFFSQ 120
+T+VI A+L GV+ L + W RP + ++ G I+
Sbjct: 65 DTRVIPARLFGVKEKGS----ARAEILLLKPLDGLWKRWEALVRPGRRLRPGSIVIVRED 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V + G ++ F + + VG IP PPYI +DY
Sbjct: 121 -----IPVQVQEALADGVRVVRFPEEC-NVLSLLEEVGEIPFPPYIKST----TATALDY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG-IKVYFVTLHVGAGTFMPVKVEDTDDHI 239
QT +AK GS AAPTA LHFT N L L I +VTLHVG GTF PV+ ED H+
Sbjct: 171 QTVFAKRNGSSAAPTASLHFTENQLRDLEDKHGITFAWVTLHVGLGTFRPVQEEDIRQHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFIT 298
+H E + TA + K G RI++ GTT R LE+ T D ++ T++FI
Sbjct: 231 IHEEYCEVPEETAALIRKAKEEGRRIIASGTTVARTLESMATHDENVVQYGRKNTSLFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F +D L++NFHLP+STLLMLV+A G + ++Y+ A+ YRF+S+GD L+
Sbjct: 291 PAYQFSVIDGLITNFHLPRSTLLMLVAALAGYDNIMEVYETAVKMGYRFFSFGDAMLI 348
>gi|262377446|ref|ZP_06070669.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter lwoffii SH145]
gi|262307676|gb|EEY88816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter lwoffii SH145]
Length = 344
Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats.
Identities = 127/363 (34%), Positives = 193/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+FDLP IA P+ R ++RL+ + DH +D+ L D ++
Sbjct: 1 MQLSDFNFDLPDELIARYPLETRSASRLLHLD----TQGQYHDHQFTDILDLLEDGDLLI 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRAS-----GGAVEVLVERMQDRFIAYCHIKASNTPKAGAELFIGPD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++ + ++ FS +++ G +P+PPY R + D Y
Sbjct: 112 AVKVIVQGR-----HENLFIVKFSQPILDVL---DQYGALPIPPYFN--REAEEIDTERY 161
Query: 181 QTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + SVAAPTA LHF ++LL++L + GI+ FVTLHVGAGTF+PV+ +D +H
Sbjct: 162 QTVFNDPTKLASVAAPTASLHFDADLLAKLEAKGIQKTFVTLHVGAGTFLPVRTDDIQNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + + + K+RG +++SVGTT+ R +E+A +G + W+G T IFI
Sbjct: 222 IMHSEWCDVPETAVEMIRQTKARGNKVISVGTTATRAVESAAQAHNGELAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFKVVDRLITNFHLPESTLLMLVSALSNRDNILNAYKHAVDSKYRFFSYGDAMLID 341
Query: 358 QKR 360
Q +
Sbjct: 342 QAK 344
>gi|159899314|ref|YP_001545561.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
gi|159892353|gb|ABX05433.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
Length = 346
Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats.
Identities = 124/361 (34%), Positives = 195/361 (54%), Gaps = 24/361 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP RIA P+ PRD +RL+V+ + ++ +L D +V N
Sbjct: 4 IADFDYHLPPERIAQTPIEPRDHSRLLVLDRATG---QLEHRHFYEIGRYLRPGDLLVAN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+++V+ A+L G + + L + W + + G L G
Sbjct: 61 DSRVLPARLYGQKAS-----GGKTELLLLKQRDAQRWEALIK--GKVAVGTRLIITGHRG 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
++++ATV + +G ++ F + + +G++P PPYI YQT
Sbjct: 114 -AQVQATVEELLESGSRIICFEQPINDRLPE---LGSMPTPPYITAPLTD----PERYQT 165
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+ GS AAPTAGLH+T L+ ++ ++G+ VTLHVG TF PV+ E+ DH +HS
Sbjct: 166 VYSAQAGSAAAPTAGLHWTPALIEQVKALGVGWASVTLHVGLDTFRPVQTENALDHQIHS 225
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED------GIINPWSGFTNIF 296
E + A TAQA+N+ ++ GGRI++VGTTS R+LET + G I +G+++I+
Sbjct: 226 EWYELSAETAQAINATRAAGGRIITVGTTSTRVLETVSQSQDVSLTAGEIQAAAGWSSIY 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y +R V+ L++NFHLPKSTLL+LVSA + + Y A+ YRF+S+GD L+
Sbjct: 286 IYPPYEYRVVNSLITNFHLPKSTLLLLVSALASRDLIMQAYAEAVERQYRFFSFGDAMLI 345
Query: 357 F 357
Sbjct: 346 I 346
>gi|146283382|ref|YP_001173535.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
stutzeri A1501]
gi|145571587|gb|ABP80693.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
stutzeri A1501]
Length = 321
Score = 348 bits (892), Expect = 9e-94, Method: Composition-based stats.
Identities = 132/330 (40%), Positives = 180/330 (54%), Gaps = 20/330 (6%)
Query: 29 MVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISC 88
MV+ +S +DL + D +VFNNT+VI A+L G + ++
Sbjct: 1 MVLDGESG---QMSHRNFADLLDCVRPGDLMVFNNTRVIPARLFGQKA-----TGGKLEI 52
Query: 89 TLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI 148
+ + S + R SK K G + G + + A L
Sbjct: 53 LVERVIGNRSVLAHVRSSKSPKPGSQI-LLDGGGTAEMVARH--------DTLFELAFDE 103
Query: 149 ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
++ + +G +PLPPYI RP DA D YQT YA+ G+VAAPTAGLHF LL L
Sbjct: 104 DVLPLLERIGHMPLPPYI--DRPDDAADRERYQTVYAQRAGAVAAPTAGLHFDEALLGAL 161
Query: 209 ISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSV 268
G++ +VTLHVGAGTF PV+VE ++H MH E + A+ ++RGGR+++V
Sbjct: 162 RDAGVQTAYVTLHVGAGTFQPVRVERIEEHHMHHEWLEVTQEVVDAVAVCRARGGRVIAV 221
Query: 269 GTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC 328
GTTS+R LETA DG + P+SG T+IFI PG F VD L++NFHLP+STLLMLVSAF
Sbjct: 222 GTTSVRSLETAAR-DGELKPFSGDTDIFIYPGKTFHVVDALVTNFHLPESTLLMLVSAFA 280
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G ET Y A++ YRF+SYGD + +
Sbjct: 281 GYPETMAAYAEAVAQRYRFFSYGDAMFITR 310
>gi|37523156|ref|NP_926533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gloeobacter
violaceus PCC 7421]
gi|46576918|sp|Q7NFD9|QUEA_GLOVI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|35214159|dbj|BAC91528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gloeobacter
violaceus PCC 7421]
Length = 352
Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 133/357 (37%), Positives = 186/357 (52%), Gaps = 19/357 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+ LP IA +P PRD +RL+VV + DLP L D +V
Sbjct: 11 LTDSYDYALPERCIAQQPAEPRDHSRLLVVDGE-----AHTHRYFYDLPGLLRPGDLLVL 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L +P W +P++ + G + F
Sbjct: 66 NDTRVIPARLFGSKAS-----GGRVEVLLLEPRAPREWLCLVKPARRLAVGARIDF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
L A V + + + E + VG PLPPY+ R D YQ
Sbjct: 117 -DGVLAARVTELDAETGGRWLRFEGEEDFEAALERVGHTPLPPYLKTGRTRD----ERYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF+ LL+RL GI+ VTLHVG GTF PV+ H MH
Sbjct: 172 TLWASRPGAVAAPTAGLHFSGELLARLAERGIERATVTLHVGLGTFRPVQSVSVHTHRMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I TA A+ +SRGGR+++VGTTS R LE+A +G+ G + +F+ PGY
Sbjct: 232 REWYEIPEATAIAIERTRSRGGRVLAVGTTSARALESAAQPNGLPATGPGRSELFVYPGY 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
R+R V+ L++NFHLP+S+LLMLVS+ G E +Y+ A+ YRFYS+GD L+
Sbjct: 292 RWRVVEGLITNFHLPRSSLLMLVSSLVGRERLLALYREAVDKGYRFYSFGDAMLILP 348
>gi|297181899|gb|ADI18076.1| s-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured Acidobacteriales bacterium
HF0200_23L05]
Length = 347
Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 196/358 (54%), Gaps = 12/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF F LP IA RD+ARLM + I H VSDL L D IV
Sbjct: 1 MDLSEFGFHLPDELIAQEAEPTRDAARLMRLDRKTG---EIEHHCVSDLADLLKPGDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++VI A+L G R + C L R+ W+ P + +++G F +
Sbjct: 58 VNDSRVIPARLLGRRD----PGGGKAECLLLSRLDETRWNALVHPGQKLRQGARAVF--E 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ LE V+D G + SG ++E I +G PLPPYI R + + D Y
Sbjct: 112 AGEHYLELEVLDCHFHGRRTIRLVSSGDDIETAIDAIGHTPLPPYIK--REVQSVDRERY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GSVAAPTAGLHFT LL+RLI+ GI +TLHVG GTF PV+ E +DH +
Sbjct: 170 QTIFARKPGSVAAPTAGLHFTPELLARLITRGISRQAITLHVGYGTFEPVRTEKVEDHRV 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
+E ++ TA+A+N G RI++VGTT+ R LE A G + P G T+++I
Sbjct: 230 AAEHYYVSEGTAEAVNCALDEGRRIIAVGTTTTRTLEAVARLNGGRLRPGEGQTDLYIHG 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F V L++NFHLP+S+LL+L +AF G E + Y AI+ YRFYSYGD L+
Sbjct: 290 SFDFEVVGGLLTNFHLPRSSLLLLAAAFAGHERLLEAYGQAIARCYRFYSYGDAMLIL 347
>gi|196234303|ref|ZP_03133133.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chthoniobacter flavus Ellin428]
gi|196221657|gb|EDY16197.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chthoniobacter flavus Ellin428]
Length = 322
Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 128/358 (35%), Positives = 193/358 (53%), Gaps = 37/358 (10%)
Query: 1 MMV-KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M++ ++D+ LP IA P+ R+ +R+MV+H I + P FL + D +
Sbjct: 1 MLLTSDYDYSLPDDLIASHPLARREDSRMMVLHR---AEQRIEHRFFREFPGFLRAGDLV 57
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+VI A++ +I V ++W +P + ++ G +
Sbjct: 58 VLNDTRVIPARVFA--------DGGKIELLFLETVREDTWKCLVKPGRKMRLGATVQIRG 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV + GE ++ F+ + G +PLPPY R ++ D
Sbjct: 110 ------VTGTVEEILPDGERIIAFTGP-----VDLDAAGELPLPPYF--ARAVEPADSER 156
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ +G+VAAPTAGLHFT +L+++ FVTLHVG GTF PV+V+D H
Sbjct: 157 YQTVFARERGAVAAPTAGLHFTPEILAQV-----PHTFVTLHVGVGTFRPVQVDDLTQHR 211
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE I +A+A+N+ + R+V++GTT+ R+LE+ + ++ T+IFI P
Sbjct: 212 MHSERFRISEESARAINAAQ----RLVAIGTTTARVLES---QGLPVSACESSTDIFIYP 264
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+ RAV L++NFHLPKSTLLMLVSA G E + Y AI+ YRFYSYGD L+
Sbjct: 265 PYQPRAVGALLTNFHLPKSTLLMLVSALAGREFVLRAYAEAIAQRYRFYSYGDCMLIL 322
>gi|15806585|ref|NP_295300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
radiodurans R1]
gi|21263929|sp|Q9RU19|QUEA_DEIRA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|6459340|gb|AAF11138.1|AE002001_4 s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
radiodurans R1]
Length = 362
Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats.
Identities = 140/355 (39%), Positives = 191/355 (53%), Gaps = 18/355 (5%)
Query: 7 DFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
FDLP RIA PRD++RLMVV I + DLP L +D +VFN ++V
Sbjct: 19 HFDLPEDRIAQTGAEPRDTSRLMVV------GEQIKHRMFRDLPDLLRPSDLLVFNESRV 72
Query: 67 ITAQLNGVRFCHINRREKEISCTLHMRVSP---NSWSVYARPSKVIKKGDILHFFSQDGQ 123
I A++ + ++ L N WS Y +P+K + G L +
Sbjct: 73 IPARVLARKPVVNGFGGGQVEVLLLREEFDVGANVWSAYLKPAK--RAGHELWLGENEAT 130
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
A V+ + G LL F +++ + +G +PLPPYI D YQT
Sbjct: 131 GH-RAEVVGVLDDGARLLRFDH---DIKPHLDEIGRLPLPPYINAGDS-DETWRERYQTV 185
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
YAK GSVAAPTAGLHFT LL+RL +G++ VTLHVGAGTF P++ DH+MH+E
Sbjct: 186 YAKTPGSVAAPTAGLHFTPELLARLDEMGVERASVTLHVGAGTFKPIQGP-VADHVMHAE 244
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ A A+ K+ G R+V+VGTT++R LE+A + +G T IFITPG R
Sbjct: 245 RYEVSETNAAAITRAKAEGRRVVAVGTTTVRTLESAWD-GAAVRAGAGETRIFITPGTRV 303
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
D+L++N HLP STLL+LV+AF G + + Y A+S YRFYS GD LL +
Sbjct: 304 EVPDLLITNLHLPGSTLLLLVAAFAGEDRIRAAYDAALSQDYRFYSLGDAMLLER 358
>gi|242281282|ref|YP_002993411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio salexigens DSM 2638]
gi|242124176|gb|ACS81872.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio salexigens DSM 2638]
Length = 366
Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats.
Identities = 131/362 (36%), Positives = 191/362 (52%), Gaps = 19/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+K +DF+LP +IA P R ++LMV+ + +D+ L +V N
Sbjct: 15 LKSYDFELPEEQIAQCPAVMRHGSKLMVLDQKTGETEI---KNFTDIVDLLPEGALLVAN 71
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------SWSVYARPSKVIKKGDILH 116
N+KV+ A++ G + ++ ++ P R SK K GDI++
Sbjct: 72 NSKVVPARIFGKKPTGGRVEFLLLTPLPLIKAEPTSDGYKAQARGLLRASKGPKTGDIIY 131
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F L+ TV+ K G + SG +L++ G IPLPPYI +R D D
Sbjct: 132 F-----DGGLKLTVLGKGKFGLSEVELEWSG-DLKKIFEECGKIPLPPYI--RRAADETD 183
Query: 177 YVDYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA + GSVAAPTAGLHF+ + +L + I+ VTL+VG GTF PV+ ED
Sbjct: 184 NDRYQTLYACDEKAGSVAAPTAGLHFSEEINEKLKAKNIERAEVTLYVGYGTFSPVRAED 243
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
DH MH E I TA A+ K G +++VGTTS R LE A + G I + G TN
Sbjct: 244 IRDHEMHHEYIEIPEETAAAVIKAKEEGRPVIAVGTTSARTLEGAFQQTGEICEFKGETN 303
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG+ F+ VD +++NFHLP+S+L++++SA G Y A+ + +RF+SYGD+
Sbjct: 304 IFIYPGFEFKVVDRMITNFHLPESSLVIMISALAGRINVLNAYTEAVDNKFRFFSYGDSM 363
Query: 355 LL 356
+
Sbjct: 364 YI 365
>gi|319778539|ref|YP_004129452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Taylorella
equigenitalis MCE9]
gi|317108563|gb|ADU91309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Taylorella
equigenitalis MCE9]
Length = 350
Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 205/361 (56%), Gaps = 25/361 (6%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++F ++LP RIA RP R ++L+ V D + L +D ++FN+
Sbjct: 9 EDFFYELPADRIAQRPTEKRTESKLLHV----GADGSWDDLTFPQIKNLLKKDDLLIFND 64
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T+VI A+L G + +I C + ++P V+ R SK + G L F
Sbjct: 65 TRVIKARLFGQKS-----TGGKIECLIERVIAPKCAIVHLRFSKRPQSGSQLFFNEG--- 116
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
+ ATVID+ L + + +G +PLPPYI D DY YQT
Sbjct: 117 --ITATVIDQSVDEFTL----EFSEPVMDVLDHIGQLPLPPYIKHN--PDDFDYERYQTV 168
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
YAK +G++AAPTAGLHF +NL++ L +GI+ VTLHVG+GTF PV + DHIMHSE
Sbjct: 169 YAKSEGAIAAPTAGLHFDNNLINELTDMGIQKSMVTLHVGSGTFKPVVTSNLKDHIMHSE 228
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-----EDGIINPWSGFTNIFIT 298
+ T ++++ + GGR+++VGTTS+R +E+A T E G+ P++G T +FIT
Sbjct: 229 WFEVTEETCESISRCRRNGGRVIAVGTTSVRAIESAATLAGLSEKGVPLPYTGDTKLFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+ +D +++NFHLP+STLLMLV+++ G E K+Y+HA+ YRF+SYGD +
Sbjct: 289 PGYKPLVIDGMITNFHLPESTLLMLVASWMGFETMHKIYKHAVEANYRFFSYGDAMYIEP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|93006388|ref|YP_580825.1| queuosine biosynthesis protein [Psychrobacter cryohalolentis K5]
gi|122415204|sp|Q1QAG2|QUEA_PSYCK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|92394066|gb|ABE75341.1| Queuosine biosynthesis protein [Psychrobacter cryohalolentis K5]
Length = 405
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 139/385 (36%), Positives = 197/385 (51%), Gaps = 38/385 (9%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAIVF 61
V ++D++LP IA P+ R +++L+ + N + + D L S+LP LN+ D IVF
Sbjct: 29 VDDYDYELPDQLIARYPLAQRSASKLLYLRANNANSQVEVEDKLFSELPELLNAGDLIVF 88
Query: 62 NNTKVITAQLNGVRFCHI---------------------NRREKEISCTLHMRVSPNSWS 100
N+TKV+ A+L G + + + +
Sbjct: 89 NDTKVMKARLFGQKDTGGKIEVLIERLVALSDLNSADLDTITSNSDIIDMTVIAEKHIAL 148
Query: 101 VYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
+ + SK +K G L + +I + IL + +L L G +
Sbjct: 149 CHVKASKALKLGQGLVLAD----GHMTGVMIGRQENLFILAFDTPILPDL----ELYGEL 200
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
P+PPY R DA D YQT + SVAAPTA LHF +L +L + GI+ FV
Sbjct: 201 PIPPYFE--RHADATDNTRYQTVFHDPAKLASVAAPTASLHFDDIVLEKLAAKGIQTAFV 258
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PVK E+ +H MHSE + TA +N + G +++++GTT R+LET
Sbjct: 259 TLHVGAGTFAPVKTENLLNHTMHSEYAHLPQATADLINQTHANGKQVIAIGTTVTRVLET 318
Query: 279 ATTEDGIINP----WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETK 334
A + + W+G T IFI PG+ F VD L++NFHLPKSTLLMLVSAF + +
Sbjct: 319 AYQQTAVDRQPLSGWAGDTEIFIYPGFEFGVVDKLLTNFHLPKSTLLMLVSAFATKKSIE 378
Query: 335 KMYQHAISHAYRFYSYGDTSLLFQK 359
+ YQHAI YRF+SYGD LL +K
Sbjct: 379 EAYQHAIESEYRFFSYGDAMLLDKK 403
>gi|145219855|ref|YP_001130564.1| queuosine biosynthesis protein [Prosthecochloris vibrioformis DSM
265]
gi|145206019|gb|ABP37062.1| Queuosine biosynthesis protein [Chlorobium phaeovibrioides DSM 265]
Length = 346
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 117/359 (32%), Positives = 188/359 (52%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP +RIA PV PRDS ++MV++ + D+ ++ D ++
Sbjct: 1 MRLSNFRYTLPKTRIADHPVEPRDSCKMMVLNRRK---KEVEHKTFEDIASYFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN+KV A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 LNNSKVFPAKIFGQK----EKTDAKIEVFLLRVLNREAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F ++ + +G +PLPPY R D
Sbjct: 113 ----EEDVVAEVVDNTTSRGRTIRFLNPETDVFSLVDRIGNVPLPPYFT--RKSKETDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT YA G+V AP AG+HFT L+ ++ +G+K+ +TLH TF ++VED H
Sbjct: 167 NYQTVYASQTGAVVAPMAGMHFTMPLIQKIQKLGVKILPITLHPSLSTFHAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K + GR+++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKIKKNGRVIAVGTTTCRVLEANATVDGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ YRF +YGD +
Sbjct: 287 YPPYQFKVTDALITNFQQPETTLLMVVSAFAEHRFLMDSYKTALKSDYRFLAYGDAMFI 345
>gi|78187173|ref|YP_375216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
gi|78167075|gb|ABB24173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
Length = 346
Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats.
Identities = 119/359 (33%), Positives = 188/359 (52%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA P PRDS ++MV++ I + D+ ++ D ++
Sbjct: 1 MRLSNFRYTLPKTKIADHPADPRDSCKMMVLNRRKKD---IEHKVFEDIASYFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKIFGQK----EKTDAKIEVFLLRVLNREAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V+D + + F I++ + +G +PLPPY R D
Sbjct: 113 ----DEDVVAEVVDNTTSRGRTIRFLNPEIDVFSLVDRIGNVPLPPYFT--RKSKDSDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT YA GSV AP AGLHFT LL ++ IG+KV +TLH TF ++VED H
Sbjct: 167 NYQTVYANQTGSVVAPMAGLHFTMPLLQKIQKIGVKVLPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K + R+++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKMKKSGRVIAVGTTTCRVLEANATVDGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ + Y+F +YGD +
Sbjct: 287 YPPYQFKVTDALVTNFQQPETTLLMVVSAFAEHRLLMDAYKVALKNDYKFLAYGDAMFI 345
>gi|210635246|ref|ZP_03298458.1| hypothetical protein COLSTE_02389 [Collinsella stercoris DSM 13279]
gi|210158464|gb|EEA89435.1| hypothetical protein COLSTE_02389 [Collinsella stercoris DSM 13279]
Length = 413
Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats.
Identities = 124/411 (30%), Positives = 190/411 (46%), Gaps = 59/411 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCP-------------LVISDHLVS 47
M +FD++LP IA P PRDS RL+V++ L +
Sbjct: 6 MRTDDFDYNLPDELIAQAPAEPRDSCRLLVLNRELEGGPARAVDAVALAHGGSVEHRHFY 65
Query: 48 DLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSK 107
D+ +L D +V N T+V+ A+L G + + + + W P K
Sbjct: 66 DIIDYLEPGDLLVANQTRVMPARLIGKKPTGGVAETLLLRRREDIDALGHVWECLVNPGK 125
Query: 108 VIKKGDILH------FFSQDGQSRLEATVID--KWNTGEILLVFSISGIE-------LER 152
+K G+++ + L A ++D + G L+ F G L+
Sbjct: 126 RLKPGNVVEYRAGGLLAPEGSPVVLRAEIVDFVDDSKGGRLVRFEPVGANEQGEPRTLDE 185
Query: 153 QISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISI 211
I G +PLPPYI D YQT YA + S AAPTAGLHFT L+ R+ +
Sbjct: 186 AIHAAGHVPLPPYITGY----EGDPEKYQTVYAMSEEHSAAAPTAGLHFTPELIERIKAK 241
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
G V L VG TF V+ +D +H+MH+E + A +A+++ K+ G R+++VGTT
Sbjct: 242 GCGWATVELEVGIDTFRLVEEDDPTEHVMHTERYHVPAEVVEAVHAAKAAGRRVIAVGTT 301
Query: 272 SLRLLETAT------------------TEDGIINPWSGF--------TNIFITPGYRFRA 305
++R LE+A EDG +G TN+++ PG +
Sbjct: 302 AVRSLESAWDANAAASVPPVTARGFEGREDGADMCGAGDIVTREDATTNLYLMPGSTYHV 361
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L++NFH+P+STL+MLVSA ++ Y+ A+ YRF+S+GD L+
Sbjct: 362 VDALITNFHVPRSTLMMLVSALATRDQVIDAYEEAVRERYRFFSFGDAMLI 412
>gi|189502170|ref|YP_001957887.1| hypothetical protein Aasi_0780 [Candidatus Amoebophilus asiaticus
5a2]
gi|226736728|sp|B3ESF6|QUEA_AMOA5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189497611|gb|ACE06158.1| hypothetical protein Aasi_0780 [Candidatus Amoebophilus asiaticus
5a2]
Length = 348
Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats.
Identities = 120/361 (33%), Positives = 179/361 (49%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F LP IA PV R+ ARLMVVH I DL +L ND +V
Sbjct: 1 MKLSSFKFTLPSKLIASHPVENREDARLMVVHKRTG---QIEHKTFKDLIDYLGENDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
N+ K+ ++L G + + +I L + + W P++ I+ G+ L+F
Sbjct: 58 LNDAKIFPSKLYGSK----EKTGAQIEVFLLRELESGEHLWDTLVEPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
G L A V+D + L F G E + +G +PLP KR + D
Sbjct: 113 ---GDGELVAEVLDNTTSRGRTLKFLFEGTREEFYEIVDQLGFVPLPN--QLKRKPETED 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+V P AGLHF+++LL RL G+ + +TLH+G + + VED
Sbjct: 168 RERYQTVYAQHIGAVVPPFAGLHFSAHLLKRLELKGVHITPLTLHIGLNSMKIIDVEDLT 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+ + SE I T +N+ ++ +VGT++++ LET+ + G + P G+TN
Sbjct: 228 KYRIGSEQFLIPDNTVTTVNTALDDKKQVCAVGTSTIKALETSVSVAGRLKPAQGWTNKL 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ L++NFHLP+S L+ +AF G E + YQ AI YRF+ YGD L+
Sbjct: 288 IFPPYDFKVCTSLITNFHLPESLPLVNAAAFGGYELMMEAYQIAIKEKYRFFVYGDAMLI 347
Query: 357 F 357
Sbjct: 348 I 348
>gi|169830865|ref|YP_001716847.1| queuosine biosynthesis protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169637709|gb|ACA59215.1| Queuosine biosynthesis protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 339
Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats.
Identities = 122/357 (34%), Positives = 185/357 (51%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + F++ LP IA +P PRDS+RL+V+ +S+ + S + +L D +V
Sbjct: 6 LRTELFNYHLPWELIAQQPATPRDSSRLLVMDRGSR---EVSETVFSAVVNWLEPGDVLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + ++ L + + W +P KG +L
Sbjct: 63 INDTKVMKARLFGKK-----PTGGKLEIFLLHPLGDSRWEALLKPY---PKGGVLLLGDS 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V++K +L F +E G PLPPYI Y
Sbjct: 115 -----VRVQVLEKTARSTFVLQFPTPEAAVEAMGKW-GETPLPPYIKEPLADQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT AK+ GS AAPTA LHFT LL R+ G++V TLH+G G+F P+K E DH +
Sbjct: 165 QTVLAKVHGSSAAPTAALHFTPELLQRVRDKGVQVVNFTLHMGVGSFRPIKTEYVADHNL 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + T A+ K +G R+V+ GT ++R LE+A ++ P SG+T++FITPG
Sbjct: 225 PLEFYHLPEETVVAVQQAKRQGSRVVACGTDAVRALESAALKE--FRPGSGWTDLFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ VD +++N HLP S+ L+LVSAF E + Y +A+ +RF S+GD +L+
Sbjct: 283 YRFQVVDRIITNLHLPCSSHLVLVSAFASREFALQAYAYAVREKFRFLSFGDATLII 339
>gi|67458722|ref|YP_246346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
felis URRWXCal2]
gi|75536818|sp|Q4UMM7|QUEA_RICFE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|67004255|gb|AAY61181.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
felis URRWXCal2]
Length = 367
Score = 346 bits (887), Expect = 3e-93, Method: Composition-based stats.
Identities = 142/388 (36%), Positives = 218/388 (56%), Gaps = 51/388 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPTELIAQYPASERDNSDLLI------ATTPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN R I+ L+ ++S +SWS +A+P++ + GD +
Sbjct: 55 FNNSKVIKAKLNLER---------NITINLNQKLSDDSWSAFAKPARKLNIGDEFY---- 101
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR---------- 170
+ + +K+ GEI + F + I + + G +PLP YI R +
Sbjct: 102 --SDNHKVIITEKFAMGEIKVKFELDNISVFEFLDKYGEMPLPVYIRRSKRHGEEEESSD 159
Query: 171 -------------------PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
D D + YQT Y++I+GSVAAPTAGLHFT +L +L +
Sbjct: 160 EAISSQNPEIATESKRTPSNDDKLDSLRYQTIYSQIEGSVAAPTAGLHFTKEILDKLKAK 219
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
G+++ FVTLHVGAGTF+PVK E+ +H +H+E I TA+ +N K RI++VGTT
Sbjct: 220 GVQIAFVTLHVGAGTFLPVKTENIHEHKIHTEYCSITPETAEIINKAKQERRRIIAVGTT 279
Query: 272 SLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
+LR LE+ + +G++ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +
Sbjct: 280 TLRTLES-SCNNGVVKAGSFETDIFITPGFKFQTTDMLLTNFHFPKSTLFMLICAFAGFK 338
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLLFQK 359
E ++Y++AI RF+SYGD ++L++K
Sbjct: 339 EMHELYKYAIKEKMRFFSYGDATVLYRK 366
>gi|110597960|ref|ZP_01386241.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
gi|110340409|gb|EAT58898.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
Length = 347
Score = 346 bits (887), Expect = 3e-93, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 187/363 (51%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP +IA P R S R++V+ + + L +L D +V
Sbjct: 1 MRASDFDYDLPEEKIACYPPEERGSTRMLVLDRASGA---LRHAWYAALDEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L+ ++ + +I L + + V R +KKGD L + +
Sbjct: 58 LNNTKVVRARLHALK-----QTGAKIELMLLEKHQADQDRVLYR--GKLKKGDTLVAYDK 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L + I I + G +P+PPY+ R + D Y
Sbjct: 111 E----LLVSDIVDDGVARIEFRGGSQSGSIRDFFERFGAVPIPPYLK--RDAEEVDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A++ GSVAAPTA L+ T LL + G+ V VTLHVG GTF+P++VE +H+M
Sbjct: 165 QTVFAELPGSVAAPTASLNMTPELLENIRLKGVDVVTVTLHVGLGTFLPIRVESLREHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE------DGIINPWSGFTN 294
H E I A T + + VK+ GGRIV+VGTT R LE A P +G +
Sbjct: 225 HREYYSISAETVEKIRKVKAAGGRIVAVGTTVTRALEHAAGRIVRSSCRAGDAPITGEAD 284
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+ +D L++NFH P+ST+LML +AF G E K+ YQ A+ Y F SYGD+
Sbjct: 285 IFIFPGYSFQVIDALLTNFHAPRSTVLMLTAAFAGAEHLKRAYQSALEEGYFFLSYGDSM 344
Query: 355 LLF 357
L+
Sbjct: 345 LII 347
>gi|139439012|ref|ZP_01772472.1| Hypothetical protein COLAER_01478 [Collinsella aerofaciens ATCC
25986]
gi|133775723|gb|EBA39543.1| Hypothetical protein COLAER_01478 [Collinsella aerofaciens ATCC
25986]
Length = 403
Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats.
Identities = 127/410 (30%), Positives = 188/410 (45%), Gaps = 62/410 (15%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV-------ISDHLVSDLPAFL 53
M +FD++LP IA P PRDS RL+VV S + + D+ ++
Sbjct: 1 MRTDDFDYNLPEELIAQAPAEPRDSCRLLVVDRKGSQAGTPLEHGGTVEHRIFRDIIDYI 60
Query: 54 NSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVYARPSKV 108
D +V N T+V+ A+L G + + L R + W +P K
Sbjct: 61 EPGDVLVINQTRVMPARLIGRK----TGSGGVVETLLLKRREDVDPLGHVWECLVKPGKR 116
Query: 109 IKKGDILHFFSQDGQS------RLEATVID--KWNTGEILLVFSISGIE-------LERQ 153
+K G + + + + L A V+D + G L+ F +G L+
Sbjct: 117 LKPGAQIEYRAGGAHAPEGAPVVLTAEVVDFVTDSRGGRLVRFEPAGCNAAGDPRTLDEA 176
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIG 212
I G +PLPPYI D YQT YA K + S AAPTAGLHFT L++ + + G
Sbjct: 177 IHAAGHVPLPPYITDY----EGDPEKYQTVYAMKEEHSAAAPTAGLHFTPELMAAIEAKG 232
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
K V L VG TF V+ +D H+MH+E + A++ K+ G R+++VGTT+
Sbjct: 233 AKFAAVELEVGIDTFRLVEEDDPTQHVMHTERYHVSQEVVDAVHKAKAEGHRVIAVGTTA 292
Query: 273 LRLLETAT------------------TEDGIINPWSGF--------TNIFITPGYRFRAV 306
+R LE+A EDG G T +++ PG + V
Sbjct: 293 VRSLESAFDTDAPVSDPAVTARYFEGREDGADTLGRGDIVVRESATTQLYLMPGSTYHVV 352
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
D L++NFH+P+STL+MLVSA ++ Y AI YRF+S+GD L+
Sbjct: 353 DALITNFHVPRSTLMMLVSALATRDQIMDAYAAAIEERYRFFSFGDAMLI 402
>gi|330836555|ref|YP_004411196.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Spirochaeta coccoides DSM 17374]
gi|329748458|gb|AEC01814.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Spirochaeta coccoides DSM 17374]
Length = 346
Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 193/357 (54%), Gaps = 13/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R ++ L+V+ ++D + D +FL + +V
Sbjct: 1 MKTKEFFFDLPEELIAQTPSERRGASHLLVLDKTTG---KLTDSSMEDFASFLPEDAVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV A+ G I+ ++ + +W+V SK K G F +
Sbjct: 58 INNSKVRKARAYG-----ISGSGGKVEFLFLEENADQTWNVMVTKSKKQKSGKEYVFHAP 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG+ A +I + G + F+ E G +PLPPYI R D Y
Sbjct: 113 DGRIGASAQIIRENPDGTKTVSFNAPITE--AFFQECGHVPLPPYIK--REDTFSDESRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHFT +L + G++V VTLHVG GTF+P++V+D +DH M
Sbjct: 169 QTIYARPEGSVAAPTAGLHFTGEILDSIRERGVQVVPVTLHVGPGTFLPMRVDDIEDHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H E + TA+ + K+ +++VGTTS+R LE+A G++ P G TN+FITP
Sbjct: 229 HYERYEVPEDTARIVTDAKANNRPVIAVGTTSIRTLESAWDSVHGMLTPGQGRTNLFITP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ +R + L++NFH P+STLL+LVSAF G + Y HAI Y F+SYGD +
Sbjct: 289 GFTYRVANHLLTNFHTPESTLLVLVSAFAGKDLIFSAYHHAIERRYHFFSYGDAMFI 345
>gi|226954457|ref|ZP_03824921.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Acinetobacter sp. ATCC 27244]
gi|226834806|gb|EEH67189.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Acinetobacter sp. ATCC 27244]
Length = 349
Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats.
Identities = 130/359 (36%), Positives = 190/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P+ R ++RL+ + DH +D+ L D +V
Sbjct: 6 MQLSDFSFDLPDELIARYPLESRSASRLLHID----TQGQYHDHAFTDILDLLEDGDLLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + ++ + + S K G L+
Sbjct: 62 LNDTKVMKARLKGKRA-----TGGAIEVLVERMLDTHTAHCHIKSSNSPKAGAELYIGED 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ + ++ FS + + G +P+PPY R + D Y
Sbjct: 117 AVPVTVQGR-----HENLFVVKFSQPILSVL---DQYGQLPIPPYFN--REAEEIDTERY 166
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF +LL +L + G++ FVTLHVGAGTFMPV+ D +H
Sbjct: 167 QTVFHDPEKIASVAAPTASLHFDQSLLEKLATKGVQKTFVTLHVGAGTFMPVRTTDITNH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
IMHSE + T + + K+RG ++++VGTT+ R LE+A + G I W+G T IFI
Sbjct: 227 IMHSEWCDVPQATIDLILATKARGNKVIAVGTTATRALESAAQANQGQIAAWTGDTQIFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 287 YPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYKHAVEQRYRFFSYGDAMLI 345
>gi|317155024|ref|YP_004123072.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio aespoeensis Aspo-2]
gi|316945275|gb|ADU64326.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio aespoeensis Aspo-2]
Length = 364
Score = 345 bits (884), Expect = 7e-93, Method: Composition-based stats.
Identities = 127/367 (34%), Positives = 187/367 (50%), Gaps = 23/367 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + + LP RIA P RD +RL+V+ + + L L + +V
Sbjct: 8 RLSSYHYTLPEERIAQTPADRRDGSRLLVLDR---AGESLRAASFASLMDHLPPDALLVA 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN----------SWSVYARPSKVIKK 111
NN++VI A++ G + ++ M R SK K
Sbjct: 65 NNSRVIPARVFGTKDTGGRVEFLMLTPLPLMEPQEGTGALTGWRTARAEGLLRASKSPKP 124
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
G ++ F + T ++ G + + G +L+ + +G +PLPPYI RP
Sbjct: 125 GAMVTFADD-----FQLTALEGGPFGRWQVELAWRG-DLKDRFEALGHLPLPPYI--HRP 176
Query: 172 IDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D YQTTY+ GSVAAPTAGLHFTS+L S L + G +TL+VG GTF P
Sbjct: 177 DSEADRERYQTTYSDTAKAGSVAAPTAGLHFTSDLRSGLAARGFGWAEITLYVGYGTFSP 236
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+ D +H MHSE + TA A+ K+ G +V+VGTTS R LE E G I +
Sbjct: 237 VRCADIREHRMHSEYIEVPEATALAVQQAKAEGRPVVAVGTTSARSLEGMVRESGRIGEF 296
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T+IFITPGYRF+ VD +++NFHLP+S+L+++++A G + Y A+ + +RF+S
Sbjct: 297 RGETDIFITPGYRFQVVDAMITNFHLPESSLIIMIAALAGRKTVLSAYDFALENGFRFFS 356
Query: 350 YGDTSLL 356
YGD L+
Sbjct: 357 YGDAMLI 363
>gi|194336675|ref|YP_002018469.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309152|gb|ACF43852.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 346
Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats.
Identities = 117/359 (32%), Positives = 184/359 (51%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA P PR ++MV++ I + D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTKIADEPASPRGKCKMMVLNRRKKD---IEHKVFEDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKIFGQK----EKTDAKIEVFLLRVLNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I++ + +G IPLPPY RP D
Sbjct: 113 ----EEDVVAEVVDNTTSRGRTIRFLNPDIDVFSLVERIGNIPLPPYFT--RPPRESDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT YA G+V AP AGLHFT +L ++ IG+K+ +TLH TF ++VED H
Sbjct: 167 NYQTVYASETGAVVAPMAGLHFTMPILQKIQKIGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K R+++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKVNKTGRVIAVGTTTCRVLEANATVDGKIKFGRGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM VSAF + Y+ A+ Y+F +YGD +
Sbjct: 287 YPPYQFKVTDALLTNFQQPETTLLMTVSAFAEHRLLMEAYKTALKEDYQFLAYGDAMFI 345
>gi|193213085|ref|YP_001999038.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
gi|238692648|sp|B3QPI5|QUEA_CHLP8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193086562|gb|ACF11838.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
Length = 340
Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats.
Identities = 128/359 (35%), Positives = 182/359 (50%), Gaps = 23/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+ LP RIA P R S RL+V+ I+ + + L L D +V
Sbjct: 1 MRVEEFDYTLPEERIATYPPAERGSTRLIVLDR---AADSITHSVYASLHERLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KVI A+L + I L + A +K GD L
Sbjct: 58 LNNSKVIRARLIANK-----PTGGRIELMLLEKHEG--VQNLALYRGRLKVGDRLLAHG- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A + + + S L G++P+PPY+ R + D Y
Sbjct: 110 -------AELTVEALPDHGVARLSCDTANLTELFEAHGSVPIPPYLK--RDAEEVDRERY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A++ GSVAAPTA L+ T LL ++ + G+ V +TLHVG GTF+P++ E ++H+M
Sbjct: 161 QTVFAELPGSVAAPTASLNLTDELLEKIKAKGVDVVHITLHVGLGTFLPIRSETFEEHVM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGIINPWSGFTNIFI 297
H E I +A + K+RGGR+V+VGTT R LE A + SG +IFI
Sbjct: 221 HREFYNIPESSAHKIGEAKARGGRVVAVGTTVTRALEHAAPRLLDSDFSQEVSGEADIFI 280
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY FR +D L++NFH P+ST+LML +AF G E ++ YQ A+ YRF SYGD+ +
Sbjct: 281 YPGYEFRIIDALLTNFHAPRSTVLMLTAAFAGKELLRRAYQEALERDYRFLSYGDSMFI 339
>gi|303249320|ref|ZP_07335551.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio fructosovorans JJ]
gi|302489288|gb|EFL49247.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio fructosovorans JJ]
Length = 375
Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats.
Identities = 136/366 (37%), Positives = 190/366 (51%), Gaps = 21/366 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + FDLPP RIA RP RD+ +LM V ++D + SDLP L + +V
Sbjct: 21 LLASYHFDLPPERIASRPCEKRDACKLMTVSRATGA---VADAVFSDLPDLLPAGALLVV 77
Query: 62 NNTKVITAQLNGVRFCHINRR---EKEISCTLHMRVSPNSW-----SVYARPSKVIKKGD 113
NNTKV +L G + ++ W S R S+ K GD
Sbjct: 78 NNTKVAPVRLFGHKPSGGAAELLLTTPVALLAPTVDPDTGWAVAPASGLLRVSRPPKPGD 137
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ F L T + G + G L +S +G +PLPPYI +R D
Sbjct: 138 RVDFAPD-----LRLTTTRRGQFGRTDFILHWQG-SLPDILSRIGHVPLPPYI--RRADD 189
Query: 174 ARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
A D YQT YA+ GS AAPTAGLHFT LL+RL G + VT HVG GTF PV+
Sbjct: 190 ADDRKTYQTVYARDDKLGSAAAPTAGLHFTEGLLTRLRERGFGLAAVTCHVGIGTFSPVR 249
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
V+D DH MH E + A+A+ K+ G +V+VGTT+ R LE E G + ++G
Sbjct: 250 VDDIRDHAMHKEWIEVPGEAAEAVRRAKAEGRPVVAVGTTAARTLEGVVREAGEMTAFAG 309
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PG+ F+ VD +++NFHLP S+L+++++A G + Y A++ YRF+SYG
Sbjct: 310 ETDIFIRPGHAFKMVDGMVTNFHLPGSSLVIMLAALVGRQPLLAAYARAVASGYRFFSYG 369
Query: 352 DTSLLF 357
D L+
Sbjct: 370 DAMLVL 375
>gi|283853697|ref|ZP_06370927.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio sp. FW1012B]
gi|283570907|gb|EFC18937.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio sp. FW1012B]
Length = 368
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 136/364 (37%), Positives = 191/364 (52%), Gaps = 21/364 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + FDLP RIA RP RD+ RLM V+ + D + +DLP L +V
Sbjct: 14 LLAAYHFDLPEDRIANRPCARRDACRLMTVNRATGA---VGDAVFADLPDLLPEGALLVA 70
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVY--------ARPSKVIKKGD 113
NNTKV +L G + ++ +R + + + + R S+ + GD
Sbjct: 71 NNTKVAPVRLLGRKPTGGAAEFLLVTPIALLRATTDPATGWTSAPAAGLLRVSRPPRPGD 130
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ F L T + G +V S G L + +G +PLPPYI +R D
Sbjct: 131 RIDFAPD-----LCITATRRGAFGHTEVVLSWQG-SLPAVMDRIGHVPLPPYI--RRADD 182
Query: 174 ARDYVDYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
A D YQT YA GS AAPTAGLHFT +LL RL + G VT HVG GTF PV+
Sbjct: 183 AADRETYQTVYASDDKLGSAAAPTAGLHFTEDLLERLRARGFGFATVTCHVGIGTFSPVR 242
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
V D +H MH E + A A+ + K+ G +V+VGTT+ R LE E G + P++G
Sbjct: 243 VADIREHAMHREWIEVPQEAATAVLAAKAAGRPVVAVGTTAARTLEGVVREAGEVRPFAG 302
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PG+ F+ VD +++NFHLP S+L+++++A G E Y AI+ YRF+SYG
Sbjct: 303 ETDIFIRPGHAFQVVDGMVTNFHLPGSSLVIMLAALVGRENLLAAYARAIASGYRFFSYG 362
Query: 352 DTSL 355
D L
Sbjct: 363 DAML 366
>gi|157803425|ref|YP_001491974.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
canadensis str. McKiel]
gi|166216748|sp|A8EXV6|QUEA_RICCK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157784688|gb|ABV73189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
canadensis str. McKiel]
Length = 386
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 142/399 (35%), Positives = 213/399 (53%), Gaps = 54/399 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD + L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSKRDHSDLLI------AATPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHIN---------------------------------------- 80
FNN+KVI A+LN + ++
Sbjct: 55 FNNSKVIKAKLNLEKNRPLSKLAYRDKFEGDMECRTAVYTNVREDSSTGSTYKLPLEVEL 114
Query: 81 RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEIL 140
+ I+ L+ R+S N WS +A+P++ + GD HF + +++K GEI
Sbjct: 115 EKRSNITINLNQRLSNNCWSAFAKPARRLNIGDEFHF------DNHKVIIVEKLAIGEIK 168
Query: 141 LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHF 200
+ F + I + + G +PLP YI + YQ Y+ I+GSVAAPTAGLHF
Sbjct: 169 VKFELDDISVFEFLDKYGEMPLPLYIRHHE-AQKSNNERYQNIYSSIEGSVAAPTAGLHF 227
Query: 201 TSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKS 260
T+++L++L + I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K
Sbjct: 228 TNDILNKLKAKNIQTTFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTARLINKAKQ 287
Query: 261 RGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTL 320
RI++VGTT+LR LE+ + +G + T+IFITPG++F+ DIL++NFH PKSTL
Sbjct: 288 EKQRIIAVGTTTLRTLES-SCNNGTVKACDFETDIFITPGFKFQTADILLTNFHFPKSTL 346
Query: 321 LMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
ML+ AF G +E K+Y++AI RF+SYGD +LL++K
Sbjct: 347 FMLICAFAGFKEMHKLYKYAIKEKMRFFSYGDATLLYRK 385
>gi|238650431|ref|YP_002916283.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
peacockii str. Rustic]
gi|259551484|sp|C4K0Y4|QUEA_RICPU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238624529|gb|ACR47235.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
peacockii str. Rustic]
Length = 365
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 145/387 (37%), Positives = 217/387 (56%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ + ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLI------AVTPLIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S +SWS +A+P++ + D +F
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI-------------- 166
+ + +K GEI + F ++ I + ++ G +PLP YI
Sbjct: 103 ---DNHKVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 167 --------------ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
D YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE+ + +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLES-SCNNGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|317051041|ref|YP_004112157.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurispirillum indicum S5]
gi|316946125|gb|ADU65601.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurispirillum indicum S5]
Length = 339
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 135/356 (37%), Positives = 196/356 (55%), Gaps = 21/356 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++ D+P IA P+ RD++RL+V+ L P ++ + S L +L D +VFN
Sbjct: 5 LCDYHVDIPAELIAQEPLAQRDASRLLVLSRAL-APAIVGESTFSRLSEYLRPGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + + L +P W V R K + G ++H
Sbjct: 64 DTRVIPARLKGRKS-----TGGAVEIFLVEPCAPRCWRVLTR-GKKLVPGTLVHIGDG-- 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
VI++ + + FS+ EL G IPLPPYI R D+RD YQ+
Sbjct: 116 ----VEAVIEERDGEMAVARFSVDDQELFAC----GAIPLPPYIK--READSRDNQRYQS 165
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTA LHFTS ++ L G++ +TLHVG GTF+PVK E D+H MHS
Sbjct: 166 VFAARDGAVAAPTASLHFTSAIVEGLRQRGVRTATITLHVGLGTFLPVKSERIDEHRMHS 225
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A T + + GGR+++VGTT +R LE+ + G T+IFI PGY
Sbjct: 226 EHFHVPAQTLDLVADTRRSGGRVIAVGTTVVRALESCFGHTPLRTG--GSTDIFIRPGYS 283
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F +D +++NFHLP STL++LVSAF G E +++YQ+A+S YRF+SYGD L
Sbjct: 284 FAVIDGMVTNFHLPDSTLILLVSAFYGRENIQQIYQYAVSQRYRFFSYGDGMLFLP 339
>gi|315187237|gb|EFU20994.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Spirochaeta thermophila DSM 6578]
Length = 337
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 131/357 (36%), Positives = 183/357 (51%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+F FDLP IA P R+ ARLMVVH I V +LP L +V
Sbjct: 1 MKLKDFYFDLPEDLIAQHPSQRREDARLMVVHRETG---RIEHSYVRELPLILPP-SCLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V +++ R ++ L V P+ W ++ + G +
Sbjct: 57 FNDTRVRKSRILATR----RDSGGKVEILLLEEVEPSLWKALVSRTRRQRAGVVYDLPGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + LV I+ E + G +PLPPYI R + Y
Sbjct: 113 REAEIV-------GMEDGLRLVRISPPID-EAYLDRHGHVPLPPYIKRADLPED--EERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT L+ L S F+TLHVG GTF PV+ E+ ++H M
Sbjct: 163 QTVFARHPGSAAAPTAGLHFTPALMDELKSRHTV-TFLTLHVGLGTFQPVRTENVEEHRM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I TA+ + S KSR + +VGTTS R LE+A E G + T+++I PG
Sbjct: 222 HTERFHISEETARVIESAKSRHIPVCAVGTTSTRALESAW-EHGRLKRGWQETSLYIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L +NFH P S+L++LVSAF G + + Y+ AI H YRF+SYGD L+
Sbjct: 281 YTFKVIDHLFTNFHTPGSSLILLVSAFLGKDLLLEAYRKAIEHRYRFFSYGDAMLII 337
>gi|162449922|ref|YP_001612289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
gi|189038881|sp|A9FI02|QUEA_SORC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161160504|emb|CAN91809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
Length = 374
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 140/378 (37%), Positives = 203/378 (53%), Gaps = 32/378 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + D++LP + IA RP RD ARL++V + + DL ++ ++
Sbjct: 1 MRCELLDYELPEALIASRPPEERDGARLLLVDRGRRA-GEVEHAAIRDLDRYIERGALVI 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-------------------NSWSV 101
N+TKV+ A+L G + ++ L R+ W
Sbjct: 60 VNDTKVVPARLFGRK----RGTGGQVELFLLHRLDGAPAGAEDLGGGPQESAPRSERWRA 115
Query: 102 YARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILL-VFSISGIELERQISLVGTI 160
R SK I+ G +L + L A V+++ G + + + S +G+ + I G +
Sbjct: 116 MGRASKPIRPGSVLDI---ERDGALVAEVLERAEDGVLTVQLSSPAGLSVAAAIDAYGHV 172
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPY+ R DA D YQT +A++ G+VAAPTAGLH + L+ RL + G+++ VTL
Sbjct: 173 PLPPYL--GRGDDASDRERYQTIFARVPGAVAAPTAGLHLSPGLVERLRANGVEIASVTL 230
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVG GTF PV V+D D H MH+E+ I TA A+ ++RG ++++GTT +R LE+A
Sbjct: 231 HVGLGTFQPVTVDDLDLHPMHAEVYSIPDATAGAIAGARARGAPVIAIGTTVVRALESAA 290
Query: 281 --TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
G++ SG T + I PGYRFR VD L++NFHLP+STLL LV AF G E T Y+
Sbjct: 291 DPARAGLVQAQSGETRLLIQPGYRFRVVDALLTNFHLPRSTLLALVFAFAGRERTLLAYR 350
Query: 339 HAISHAYRFYSYGDTSLL 356
AI YRFYSYGD L+
Sbjct: 351 AAIDAGYRFYSYGDAMLI 368
>gi|317486110|ref|ZP_07944957.1| tRNA ribosyltransferase-isomerase [Bilophila wadsworthia 3_1_6]
gi|316922633|gb|EFV43872.1| tRNA ribosyltransferase-isomerase [Bilophila wadsworthia 3_1_6]
Length = 365
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 131/365 (35%), Positives = 184/365 (50%), Gaps = 22/365 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + ++LPP RIA P R ++RL+V+ + S L +L ++
Sbjct: 12 LLSSYRYELPPERIAQHPGE-RGASRLLVLDRETGKRI---HSHFSHLLEYLPKGTLLIA 67
Query: 62 NNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSV-----YARPSKVIKKGDI 114
NN++V+ A++ G R L + W +P+K + GD
Sbjct: 68 NNSRVVPARMIGQRPSGGKMEFLLLTPMPLLEQHGEGDGWHCAEADGLIKPAKNARIGDY 127
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L F L V+ K G + +G ++ G +PLPPYI R
Sbjct: 128 LVFGDD-----LRVEVLAKGEFGRHRVRLHWTG-DIRALFESRGHLPLPPYIK--REDTK 179
Query: 175 RDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT YA+ GSVAAPTAGLHFT L +++ S G++ VTLHVG GTF PV+
Sbjct: 180 DDRGTYQTVYARDDKAGSVAAPTAGLHFTPELRAQMASAGVEWAEVTLHVGYGTFSPVRC 239
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSG 291
ED +H+MH E + T A+ K+ G +++VGTTS R LE A G + G
Sbjct: 240 EDIREHVMHEEFVEVPQATVDAIGKAKAEGRPVIAVGTTSARTLEGVAGAHGGELTAHQG 299
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+ N FI PGYRF +D L++NFHLP+STLLMLVSA G E + Y A+ YRF+SYG
Sbjct: 300 WINCFIWPGYRFHVLDGLITNFHLPESTLLMLVSALTGRERMLETYTEAVKMEYRFFSYG 359
Query: 352 DTSLL 356
D L+
Sbjct: 360 DAMLI 364
>gi|212550785|ref|YP_002309102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
gi|226736729|sp|B6YR69|QUEA_AZOPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|212549023|dbj|BAG83691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
Length = 354
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 124/364 (34%), Positives = 190/364 (52%), Gaps = 17/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP IAL P RD +RLMVV+ + + D+ + N D +
Sbjct: 1 MRLSKFKFHLPQELIALFPSVDRDESRLMVVYHKTG---RVEHVIFKDIIQYFNEKDTFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+T VI A+LNG + + + L + P W V P++ I+ G+ L+F
Sbjct: 58 FNDTSVIPARLNGNK----EKTGARVEVFLLRELDPIQRIWDVLVDPARKIRIGNKLYFE 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
++D + + A +ID + ++ F G ++ + +G +P+P Y+ R + D
Sbjct: 114 NEDSDTIV-AEIIDNTTSRGRIIRFLYDGPYESFKKILYNLGNMPIPDYL--DRKVTKED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+V AP AGLHF+ L+ RL G ++ F+T+H G G F + VED
Sbjct: 171 RERYQTIYAKNEGAVVAPAAGLHFSHELMKRLELKGCELTFITVHSGMGNFRAIDVEDLF 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---ATTEDGIINPWSGFT 293
+ SE I+ TA +N K +I +VGT+ LR +E T G +NP++G+T
Sbjct: 231 KYKSESERIVINTETATKINQAKQNRKQICAVGTSVLRTIEDRENVVTSQGYLNPFTGWT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F L++ FHLP S++L+ V+AF G + +Y+ AI YRF YGD
Sbjct: 291 NKFIFPPYNFITSTSLITGFHLPLSSMLLQVAAFGGFDLIMDVYKQAIEAKYRFGVYGDA 350
Query: 354 SLLF 357
L+
Sbjct: 351 MLII 354
>gi|15892206|ref|NP_359920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
conorii str. Malish 7]
gi|21263890|sp|Q92IY7|QUEA_RICCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|15619340|gb|AAL02821.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
conorii str. Malish 7]
Length = 365
Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 144/387 (37%), Positives = 216/387 (55%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLI------AVTPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S ++WS +A+P++ + D +F
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDNWSAFAKPARKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI-------------- 166
+ + +K GEI + F ++ I + ++ G +PLP YI
Sbjct: 103 ---DNHKVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 167 --------------ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
D YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE+ + +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLES-SCNNGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|110598218|ref|ZP_01386494.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
gi|110340133|gb|EAT58632.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
Length = 346
Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 121/359 (33%), Positives = 186/359 (51%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA +P PRD RLMV++ I + D+ ++ D ++
Sbjct: 1 MRLSNFRYTLPKTKIADQPTEPRDKCRLMVLNRRKKD---IDHKMFDDIVSYFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKIFGQK----EKTDAKIEVFLLRVLNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I++ + +G IPLPPY RP D
Sbjct: 113 ----EEDVVAEVVDNTTSRGRTIRFLNPEIDVFSLVERIGNIPLPPYFT--RPPVESDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT YA G+V AP AGLHFT LL ++ IG+K+ +TLH TF ++VED H
Sbjct: 167 NYQTVYASQTGAVVAPMAGLHFTMPLLQKIQKIGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K RI++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKVNKTGRIIAVGTTTCRVLEANATVDGKIKFGRGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM VSAF + Y+ A+ Y+F +YGD +
Sbjct: 287 YPPYQFKVTDALLTNFQQPETTLLMAVSAFAEHRLLMEAYKTALKGDYQFLAYGDAMFI 345
>gi|221194651|ref|ZP_03567708.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
rimae ATCC 49626]
gi|221185555|gb|EEE17945.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
rimae ATCC 49626]
Length = 387
Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 129/397 (32%), Positives = 185/397 (46%), Gaps = 52/397 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP IA P PRDS RL+V+H + I D+ +L+ D IV
Sbjct: 1 MRTDDFDYDLPDELIAQTPAEPRDSCRLLVLHRDDGS---IEHRHFRDIVEYLDPGDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVYARPSKVIKKGDIL 115
N T+V+ A+L G + L R + W P K +K G I+
Sbjct: 58 ANKTRVMPARLVGRK----RETGGVSETLLLKRREDLDPLGHLWECLVSPGKRLKPGAII 113
Query: 116 HFFSQDGQSRLEATVI--------DKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYI 166
+ + + L + V+ + + G L+ F G L+ I G +PLPPYI
Sbjct: 114 EYRAGGLHAPLTSPVVLCGEIVDFVEGSKGGRLVRFEAPGTQALDEAIHAAGHVPLPPYI 173
Query: 167 ARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
D YQT YA + + S AAPTAGLHFT L+ + + GI V L VG
Sbjct: 174 TDY----EGDPEKYQTVYAMQDEHSAAAPTAGLHFTPELIEDIKTHGITWESVELEVGID 229
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TF V+ +D H++H+E + A+ + K+ G R++++GTTS+R LE+A D
Sbjct: 230 TFRLVEEDDPTQHVIHTERYHVSQGVIDAIRTTKAEGHRVIAIGTTSVRSLESAWDGDAC 289
Query: 286 ----------INPWSGF----------------TNIFITPGYRFRAVDILMSNFHLPKST 319
SG TN+++ PG F VD +++NFH+P+ST
Sbjct: 290 ASNPAITARYFEDASGSARITKTGDLVARENATTNLYLMPGSTFHVVDAMVTNFHVPRST 349
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
L+MLVSAF E Y AI YRF S+GD L+
Sbjct: 350 LMMLVSAFASRESIMSAYDAAIKERYRFLSFGDAMLI 386
>gi|157828160|ref|YP_001494402.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165932858|ref|YP_001649647.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. Iowa]
gi|166216749|sp|A8GR69|QUEA_RICRS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038875|sp|B0BWL5|QUEA_RICRO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157800641|gb|ABV75894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165907945|gb|ABY72241.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. Iowa]
Length = 365
Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats.
Identities = 146/387 (37%), Positives = 216/387 (55%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLI------AVTPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI AQLN K I+ L+ ++S +SWS +A+P++ + D +F
Sbjct: 55 FNNSKVIKAQLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI-------------- 166
+ + +K GEI + F ++ I + ++ G +PLP YI
Sbjct: 103 ---DNHKVIITEKLAMGEIKVKFKLNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 167 --------------ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
D YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE+ + +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLES-SCNNGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|34580774|ref|ZP_00142254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
sibirica 246]
gi|28262159|gb|EAA25663.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
sibirica 246]
Length = 365
Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats.
Identities = 145/387 (37%), Positives = 215/387 (55%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLI------AVTPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S +SWS +A+P++ + D +F
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI-------------- 166
+ + +K GEI + F ++ I + ++ G +PLP YI
Sbjct: 103 ---DNHKVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 167 --------------ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
D YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKAYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTADIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE+ + +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLES-SCNNGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|220903425|ref|YP_002478737.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219867724|gb|ACL48059.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 365
Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats.
Identities = 129/361 (35%), Positives = 190/361 (52%), Gaps = 11/361 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++ + FDLP ++A P R +RL+V+ N L + DLP L ++
Sbjct: 9 LLQSYRFDLPQEQVAQFPPEERGGSRLLVMPRN--GELTLRHENFCDLPDCLPEGALLIA 66
Query: 62 NNTKVITAQLNGVRFCHINRR---EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NN++V+ A+L G R + + + + +YA +++ G +
Sbjct: 67 NNSRVLQARLLGTRSTGGKVEFLLLTPLPLVIERARADKNGGLYAEAEGLVRSGGSIREG 126
Query: 119 SQDG-QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G + + TV++ G+ + S +G +L + G IPLPPYI R D
Sbjct: 127 ESFGFGAGIGVTVLESGPFGQRRVRLSWTG-DLAAAFAATGHIPLPPYIKRPDAEDD--L 183
Query: 178 VDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT Y++ GSVAAPTAGLHFT L RL + G + VTL+VG GTF PV+ D
Sbjct: 184 SRYQTVYSRQDKTGSVAAPTAGLHFTPPLRERLAAKGFEWAEVTLYVGYGTFSPVRSSDI 243
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MH E + TA A+ + +++VGTTSLR LE G + P++G+T+I
Sbjct: 244 RSHRMHREYIEVPEATALAIARAREEKRPVIAVGTTSLRTLEGVAELCGRVQPYTGWTDI 303
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ PG FR D L++NFHLP+S+LLMLVSAF G + Y AI++ YRF+SYGD L
Sbjct: 304 FLYPGRPFRVADGLVTNFHLPESSLLMLVSAFAGRKRVLDAYAEAIANNYRFFSYGDAML 363
Query: 356 L 356
+
Sbjct: 364 I 364
>gi|225621383|ref|YP_002722641.1| S-adenosylmethionine--tR-ribosyltransferase-isomerase [Brachyspira
hyodysenteriae WA1]
gi|225216203|gb|ACN84937.1| S-adenosylmethionine--tR-ribosyltransferase-isomerase [Brachyspira
hyodysenteriae WA1]
Length = 358
Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats.
Identities = 123/361 (34%), Positives = 195/361 (54%), Gaps = 21/361 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
++F LP + IA P + RD +LM+++ + I + SD+ +LN D +V N++K
Sbjct: 10 YNFYLPENLIATTPNYERDHCKLMILNKSTG---EIEHKIFSDIINYLNKEDILVLNDSK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDI-LHFFSQDG 122
VI A++ + + L + + + +W + + +K + L + + +
Sbjct: 67 VIPARIYAKK-----NTGGNVEILLLNKFNNDESTWECLIKGKNIKEKDILYLDYSNLEN 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP------IDARD 176
+EA ++K N L+ FS + +G +PLPPYI + R + +D
Sbjct: 122 VGNIEAV-LEKDNISTKLIKFSKPLTS--EILDAIGKVPLPPYIIQSRKKKGEEEYNDKD 178
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ YAK +GS+A+PT+GLHFT LL ++ S+GI V +VTLHVG TF P+K +D
Sbjct: 179 KEFYQNVYAKNEGSIASPTSGLHFTKELLEKIKSMGITVCYVTLHVGFSTFNPLKEDDLR 238
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H+MH E I + + + K G R+VS GTT R+LE+ + G T+IF
Sbjct: 239 NHVMHEEKFIIPKESYDIIINAKKDGRRVVSCGTTVARVLESEYD-NYDFKRMEGSTDIF 297
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+ VD L++NFH P STLL +VSAF G + Y+ A+ + YRF+SYGD +
Sbjct: 298 IYPPYKFKCVDALITNFHTPHSTLLAMVSAFAGYDNIMNAYKTAVENNYRFFSYGDAMFM 357
Query: 357 F 357
+
Sbjct: 358 Y 358
>gi|206896247|ref|YP_002247231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprothermobacter proteolyticus DSM 5265]
gi|206738864|gb|ACI17942.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprothermobacter proteolyticus DSM 5265]
Length = 343
Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 189/351 (53%), Gaps = 19/351 (5%)
Query: 7 DFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
+++LP IA + PRD+ RL+VVH + + D + ++ D +V NNTKV
Sbjct: 12 NYELPKHLIAQKLSDPRDACRLLVVHRDTGT---LEDKRFYQIKDYVKPGDVLVLNNTKV 68
Query: 67 ITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRL 126
+ A++ G R + + L + N W +P + IK G++L L
Sbjct: 69 LKARIKGRR-----KTGGAVEILLVRPLRDNVWECLLKPLRKIKIGEVLLLNGGAEVKLL 123
Query: 127 EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK 186
E T ++ +S EL+ + G +P PPYI R +YQT +A
Sbjct: 124 ERT------ERTAIIELGMSAQELDSYLDDWGEVPTPPYIRR-----KVPAEEYQTVFAS 172
Query: 187 IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
G+VAAPTAGLHFT NLL L ++G+K+ +VTLHV GTF + + + +H E F
Sbjct: 173 KPGAVAAPTAGLHFTENLLQDLKNMGVKISYVTLHVALGTFESLASDWQEKSELHQETFF 232
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
+ A T + +N K G + +VGTT +R LE+A +DG +N T++FI PGY ++ V
Sbjct: 233 VSAETTKTVNEAKESGHSVFAVGTTVVRSLESAACDDGKLNSVFSDTSLFIKPGYSWKVV 292
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
D L++NFHLP+++LL+LVS+F + K Y+HAI Y+FYS GD L+
Sbjct: 293 DKLVTNFHLPQTSLLLLVSSFATPDLILKAYRHAIEEEYKFYSLGDAMLIL 343
>gi|21673380|ref|NP_661445.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
gi|34222900|sp|Q8KEY7|QUEA_CHLTE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21646477|gb|AAM71787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
Length = 340
Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 124/359 (34%), Positives = 181/359 (50%), Gaps = 23/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R S RL+V++ I+ + L L D +V
Sbjct: 1 MKVSDFDYALPEERIACYPPAKRGSTRLIVLNRATGS---ITHSAYASLHEELRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L + I L + R ++ GD L +
Sbjct: 58 LNNSRVIRARLIAHK-----PTGARIELMLLEKHEEAQNLALYR--GRLRIGDRL--LAH 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EA D + S + L G++P+PPY+ R + D Y
Sbjct: 109 GVELSVEALPSD------GIARLSCATGNLADLFDAHGSVPIPPYLK--RDAEELDRERY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A++ GSVAAPTA L+ T LL ++ + G+ + VTLHVG GTF+P++ E ++H+M
Sbjct: 161 QTVFAELPGSVAAPTASLNLTDELLDKINAKGVGIAHVTLHVGLGTFLPIRSERFEEHVM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGIINPWSGFTNIFI 297
H E I A+ + K+ GGR+V+ GTT R LE A E G S +IFI
Sbjct: 221 HREFYNIPQTAARKIGETKASGGRVVAAGTTVTRALEHAAPKLIESGFTQEVSSEADIFI 280
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY FR +D L++NFH P+ST+LML +AF E + Y A+ + YRF SYGD+ +
Sbjct: 281 YPGYEFRIIDALITNFHAPRSTVLMLTAAFAEKELLMRAYHEALDNGYRFLSYGDSMFI 339
>gi|229586455|ref|YP_002844956.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
africae ESF-5]
gi|259551480|sp|C3PMQ3|QUEA_RICAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|228021505|gb|ACP53213.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
africae ESF-5]
Length = 365
Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 144/387 (37%), Positives = 216/387 (55%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSRERDNSDLLI------AVTPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN + I+ L+ ++S +SWS +A+P++ + D +F
Sbjct: 55 FNNSKVIKAKLN---------LGENITINLNQKLSDDSWSAFAKPARKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI-------------- 166
+ + +K GEI + F ++ I + ++ G +PLP YI
Sbjct: 103 ---DNHKVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 167 --------------ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
D YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAKIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE+ + +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLES-SCNNGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|291278524|ref|YP_003495359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Deferribacter desulfuricans SSM1]
gi|290753226|dbj|BAI79603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Deferribacter desulfuricans SSM1]
Length = 341
Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 124/353 (35%), Positives = 184/353 (52%), Gaps = 21/353 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+DF+ + IA P RD +RL+VV+ + D D+ F + N +V NNTK
Sbjct: 9 YDFEFDENLIAQYPEKKRDESRLLVVNRQT---NKLLDKRFKDIVDFFDDNMFLVLNNTK 65
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L + E+ L ++ + K L+ + +
Sbjct: 66 VLNARLFAKKES-----GGEVEIFLLEQLDGKRFKALL--GGKWKSEGYLYI----NEYK 114
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
L + D E ++ + G +PLPPYI R + D Y T ++
Sbjct: 115 LFVSKRDD----EGIVTVDFIDANPFEIMDKYGHVPLPPYIK--REDNELDRERYNTVFS 168
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
K GSVAAPTAGLHFT + +L G++++ +TL+VG GTF PVK E +DH MH E
Sbjct: 169 KKIGSVAAPTAGLHFTEEIFDKLKEKGVEIFEITLNVGLGTFRPVKTEFIEDHKMHKESF 228
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS-GFTNIFITPGYRFR 304
I+ A +N +K G ++V+VGTT +R LE+A ++ G I P +T++FI GY+F+
Sbjct: 229 SIEKSVADKINKLKKDGKKLVAVGTTVVRALESAASQFGEITPCENAYTDLFIREGYQFK 288
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
VD +++NFHLPKSTL +LV AF G + KK Y HA+ YRF+SYGD +
Sbjct: 289 VVDKMITNFHLPKSTLFILVCAFGGYDLMKKAYAHAVKDRYRFFSYGDAMFII 341
>gi|21672414|ref|NP_660481.1| S-adenosylmethionine:tRNA ribosyltransferase [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
gi|25009009|sp|Q8KA10|QUEA_BUCAP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21623024|gb|AAM67692.1| S-adenosylmethionine:tRNA ribosyltransferase [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
Length = 357
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 191/359 (53%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F +P S IA P F R +RL++++ + I+ ++ +NS D I+
Sbjct: 1 MHLSNFYFKIPKSLIAFYPCFIRSQSRLLIINGHTG---KIAHKFFFNILNEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + + L ++ NS + S IK L F
Sbjct: 58 FNDTKVIPARLFGYKKS-----GGRVEVLLERILNKNSILASIKSSNEIKMNSYLFF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ + I + ++ F + + + +G IPLPPYI R + D Y
Sbjct: 110 -GKKNKIKSFIIGYKNPFYIIKFLHNKKSVIDIFNNIGHIPLPPYIK--RFNEKIDSSLY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GSVAAPTAGLHF LL L G+ + F+TLH+G+GTF P++ + HIM
Sbjct: 167 QTVYKKNLGSVAAPTAGLHFDLPLLEALSKKGVDIDFLTLHIGSGTFQPIRTAKIEKHIM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPWSGFTNIFIT 298
HSE+ + + Q + K +GGRI++VGTT+LR LE+A + + TNIFI
Sbjct: 227 HSELVEVSSNLIQKIKLCKKKGGRIIAVGTTTLRALESAYHSNSWNNKKNYVKDTNIFIY 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + YRF+SYGD +
Sbjct: 287 PGYKHNVVDALITNFHFPESTLIMLVCSFLGYKNTMNAYHEAIKNNYRFFSYGDAMYIT 345
>gi|239905378|ref|YP_002952117.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio magneticus RS-1]
gi|239795242|dbj|BAH74231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio magneticus RS-1]
Length = 370
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 134/366 (36%), Positives = 194/366 (53%), Gaps = 21/366 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + F+LP + IA RP RD+ RLMV+ + + +DLP L +V
Sbjct: 16 LLASYHFELPDALIADRPCEVRDACRLMVLDRAAGS---LDHRVFTDLPDLLPEGALLVV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVY--------ARPSKVIKKGD 113
NNTKV +L G R ++ ++ + + + R S+ + GD
Sbjct: 73 NNTKVAPVRLLGKRPTGGAAEFLLLTPVALLKPETDPATGWTSAPAAGLLRVSRPPRPGD 132
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ F L T + + G + S G L ++ +G +PLPPYI +R D
Sbjct: 133 RIDFAPD-----LAVTAVSRGAFGHTEVTLSWRG-ALPEILTRIGHVPLPPYI--RRADD 184
Query: 174 ARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
A D YQT YA+ GS AAPTAGLHFT LL+RL G ++ VT HVG GTF PV+
Sbjct: 185 AADRETYQTVYARDDKLGSAAAPTAGLHFTEELLARLAGRGFRLTAVTCHVGLGTFSPVR 244
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
VED DH MH E + A A++ K+ G +++VGTT+ R LE A E G ++G
Sbjct: 245 VEDLRDHAMHQEWIEVSPEAASAVSRAKAEGRPVIAVGTTAARTLEGAVREAGAFGAFAG 304
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
FT+IFI PG+RF VD +++NFHLP S+L+++++A G E Y A++ YRF+SYG
Sbjct: 305 FTDIFIRPGHRFAVVDGMVTNFHLPGSSLVIMLAALAGRESILAAYGQAVASGYRFFSYG 364
Query: 352 DTSLLF 357
D L+
Sbjct: 365 DAMLVL 370
>gi|296125826|ref|YP_003633078.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Brachyspira murdochii DSM 12563]
gi|296017642|gb|ADG70879.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Brachyspira murdochii DSM 12563]
Length = 358
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 130/359 (36%), Positives = 194/359 (54%), Gaps = 17/359 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
++F LP + IA P + RD RLM ++ N + + +D+ +LN +D +V N++K
Sbjct: 10 YNFYLPENLIATEPNYERDHCRLMTLNKNTG---ELEHKIFADIINYLNKDDVLVLNDSK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI-LHFFSQDGQS 124
VI A++ + N EI + ++W + + + + L + D
Sbjct: 67 VIPARIYAKKSTGGN---AEILLLNKVNNDESTWECLIKGKNIKEADTLYLDYAHLDNVG 123
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP------IDARDYV 178
+EA I+K N L+ FS + +G IPLPPYI + R ++ D
Sbjct: 124 NIEAL-IEKDNISTKLIKFSKPLTN--DILDTIGKIPLPPYIIQSRKRKGEEEYNSNDKE 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQ YAK +GS+A+PT+GLHFT+ LL ++ SIG+ V +VTLHVG TF P+K +D +H
Sbjct: 181 FYQNVYAKNEGSIASPTSGLHFTNELLDKIKSIGVTVCYVTLHVGFSTFNPLKEDDLRNH 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
IMH E I + + + K G RIVS GTT R+LE+ + G TNIFI
Sbjct: 241 IMHEEKFIIPKDSYDIIINAKKEGRRIVSCGTTVARVLESEYD-NYDFKRLEGSTNIFIY 299
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y+F+ VD L++NFH P STLL +VSAF G + Y+ A+ + YRF+SYGD ++
Sbjct: 300 PPYKFKCVDALITNFHTPHSTLLAMVSAFAGYDNIMNAYKTAVDNNYRFFSYGDAMFIY 358
>gi|218887143|ref|YP_002436464.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758097|gb|ACL08996.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 417
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 136/391 (34%), Positives = 187/391 (47%), Gaps = 41/391 (10%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNL---SCPLVISDHLVSDLPAFLNSNDA 58
++ + F LP +IA P R +RL+V+ ++ +DL L
Sbjct: 33 RLESYRFHLPEDQIAQHPAPERGGSRLLVLDRRTMEKGSAAALTHAHFADLCDHLPEGCL 92
Query: 59 IVFNNTKVITAQLNGVRFCHI---------------------NRREKEISCTLHMRVSPN 97
+V NN+KV+ A+L G+R S +R
Sbjct: 93 LVANNSKVLPARLLGLRPTGGKVEFLLLTPLPLLEELARSDAGAGSGRPSTGNGLRDEGA 152
Query: 98 SW-----SVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELER 152
W R SK I+ GD++ F L VI + G + G +L +
Sbjct: 153 GWRSVPAEGLLRASKKIRPGDVMDFGP-----HLRVEVIQPGDFGRSAVRLHWMG-DLRQ 206
Query: 153 QISLVGTIPLPPYIARKRPIDA----RDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLS 206
G +PLPPYI R+ + + D YQT YA GSVAAPTAGLHFT +L +
Sbjct: 207 LFLQQGHLPLPPYIRRETGVSSSDAQEDRDRYQTVYADDSRLGSVAAPTAGLHFTDDLRA 266
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
RL + K VTL+VG GTF PV+ D H MH E + TA A+ + K+ G +V
Sbjct: 267 RLAATDRKWAEVTLYVGYGTFSPVRCADIRQHAMHREYIEVSEATAAAIRAAKAEGRPVV 326
Query: 267 SVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSA 326
+VGTTS R LE G + ++G+T+IFI PGYRF D +++NFHLP+S+LLMLVSA
Sbjct: 327 TVGTTSTRTLEGTVRACGEVRAFTGWTDIFIKPGYRFTVADHIITNFHLPESSLLMLVSA 386
Query: 327 FCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F G Y A++ YRF+SYGD LL
Sbjct: 387 FAGRTRVLSAYAEAVARGYRFFSYGDAMLLL 417
>gi|262371071|ref|ZP_06064393.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter johnsonii SH046]
gi|262313957|gb|EEY95002.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter johnsonii SH046]
Length = 346
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 129/359 (35%), Positives = 186/359 (51%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+FDLP IA P+ R ++RL+ + D +D+ L++ D +V
Sbjct: 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLD----AQGQHHDFQFTDILDLLDTGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRAS-----GGAVEVLVERMQDAFIAHCHIKASNTPKAGAELFIGPD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + L + + L G +P+PPY R +A D Y
Sbjct: 112 AVKVTVLGRHEN--------LFIVEFSQPILTVLDLYGQLPIPPYFN--REAEAIDTERY 161
Query: 181 QTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + SVAAPTA LHF LL +L + GI+ FVTLHVGAGTF+PV+ D +H
Sbjct: 162 QTVFNDPTKLASVAAPTASLHFDQKLLDQLEAKGIQKTFVTLHVGAGTFLPVRTNDIANH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + + + K+RG +++SVGTT+ R +E+A DG + W+G T IFI
Sbjct: 222 IMHSEWCDVPEHAVELIRQTKARGNKVISVGTTATRAVESAAQAHDGELKAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ VD L++NFHLP+STLLMLVSA + YQHA+++ YRF+SYGD L+
Sbjct: 282 YPGYEFKVVDRLITNFHLPESTLLMLVSALSNRDNILAAYQHAVANQYRFFSYGDAMLV 340
>gi|119356633|ref|YP_911277.1| queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
gi|166216712|sp|A1BEM6|QUEA_CHLPD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|119353982|gb|ABL64853.1| Queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
Length = 341
Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats.
Identities = 122/360 (33%), Positives = 182/360 (50%), Gaps = 22/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP S IA P R S RL+V+ + I + L FL D +V
Sbjct: 1 MKVSDFDYELPESHIARYPPDERGSTRLLVLQRSTG---EIMHSRYAGLHGFLRKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ + +I L + V R S +KKGD L +
Sbjct: 58 LNNSRVVKARMFAFK-----PTGGKIELVLLEKHGDEQNLVLYRGS--LKKGDALLAYGC 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +++ + ++ ++ +P+PPY+ R + D Y
Sbjct: 111 E-------FGVEELVGQGVAVLSVKGEGTVQDVFERYAAMPIPPYLK--REAEEIDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GSVAAPTA L+ T L L G+ + +TLHVG GTF+P++V+ D+H+M
Sbjct: 162 QTVFAEQPGSVAAPTASLNMTGELFDSLRQKGVSIASMTLHVGLGTFLPIRVDHFDEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINPWSGFTNIFI 297
H E I T + + K+ GGR+++VGTT R LE A SG +IFI
Sbjct: 222 HREFYVIPDETIALIRTTKNNGGRVIAVGTTVTRALEHAADVVFNSNGNGSVSGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRFR +D L++NFH P+ST+LML +AF G E+ Y A+ Y F SYGD+ L+
Sbjct: 282 YPGYRFRVIDALLTNFHAPRSTVLMLTAAFAGAEKLFHAYAEALRWEYDFLSYGDSMLIL 341
>gi|303325841|ref|ZP_07356284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio sp. 3_1_syn3]
gi|302863757|gb|EFL86688.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio sp. 3_1_syn3]
Length = 376
Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats.
Identities = 132/379 (34%), Positives = 191/379 (50%), Gaps = 38/379 (10%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPN--LSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + FDLPP +IA P R ++RL+V+ + + DLP L N I+
Sbjct: 10 LSSYRFDLPPEQIAQFPPEERGASRLLVLPRKGASDPRPELRHGMFGDLPDCLPENALII 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV---------------------SPNSW 99
NN++V+ A+L G R ++ L +
Sbjct: 70 ANNSRVLQARLLGSR-----GTGGKVEFLLLTPLPLVMERARPDKRLGGAGGAEAFSAEA 124
Query: 100 SVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
R +++G+ F + + TV++ G+ + + G +L + + G
Sbjct: 125 EGLVRCGGSVREGETFAFGAG-----ISVTVLESGPFGQRRVRLAWQG-DLAKAFAATGH 178
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
IPLPPYI R D YQT YA+ GSVAAPTAGLHFT + +L G +
Sbjct: 179 IPLPPYIK--RADGEEDLSRYQTVYARSDKTGSVAAPTAGLHFTPAMREKLADRGFEWAE 236
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
VTL+VG GTF PV+ ED H MH E + TA A+ K++G +V+VGTTS+R LE
Sbjct: 237 VTLYVGYGTFSPVRCEDIRSHRMHREYVEVPEATAAAIARAKAQGRPVVAVGTTSVRTLE 296
Query: 278 TATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
G + P++G+T+IF+ PG FR VD +++NFHLP+S+LLMLVSAF G E Y
Sbjct: 297 GVAELCGRVQPYTGWTDIFLYPGRSFRVVDAVLTNFHLPESSLLMLVSAFAGRERMLAAY 356
Query: 338 QHAISHAYRFYSYGDTSLL 356
A++ YRF+SYGD L+
Sbjct: 357 AEAVTRGYRFFSYGDAMLI 375
>gi|258648186|ref|ZP_05735655.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
gi|260852070|gb|EEX71939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
Length = 349
Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats.
Identities = 121/361 (33%), Positives = 179/361 (49%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+F LP +IA P RD R+MV+ I +L + + D V
Sbjct: 1 MKLSQFNFKLPAEKIAKYPSPLRDDCRMMVLDKTTG---KIEHRKFDELLDYFDEKDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNQELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ + A VID + L F G E +R + +G P+P RP + D
Sbjct: 114 E---DNSIVAEVIDNTTSRGRTLRFLYDGDHEEFKRSLYALGEAPIPR--EINRPTEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +A+ +G+V AP AGLHF+ ++ ++ GI ++TLH G G + VED
Sbjct: 169 LERFQTIFARNEGAVTAPGAGLHFSKVMMKKMELKGIDAAYLTLHCGLGNYRTTDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+DA + +NS + +I++VG+T +R LE DG I + G+TN F
Sbjct: 229 KHKMESEQMFVDAKCCRHVNSAQDANRKILAVGSTVMRALEVCVGPDGHIKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D ++ NF P STLLML SAF G ++ Y+ AI Y F YGD L+
Sbjct: 289 IFPPYEFSVADAMLVNFQFPYSTLLMLASAFGGYDQVMGAYKEAIKGEYMFGPYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|297183447|gb|ADI19579.1| s-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured Acidobacteria bacterium
HF0770_27F21]
Length = 355
Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats.
Identities = 124/367 (33%), Positives = 184/367 (50%), Gaps = 22/367 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FD+ LP IA P RD +RL+ + S++ +++P L D ++
Sbjct: 1 MRIELFDYHLPADLIAQSPPERRDESRLLSLIR--GVTDKPSEYRFAEVPELLREGDVLI 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV------SPNSWSVYARPSKVIKKGDI 114
N+ V +L R + L + W R K ++ G+I
Sbjct: 59 VNDAMVAPQRLYAQR-----TTGGAVEILLLDDAGASVGSQGSVWEAMIRGGKRLRPGEI 113
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L+ D + L K + L + E+ G +PLPPYI R R +
Sbjct: 114 LYL--DDCATHLVIHGETKKGRHLVELPANYRAEEVL---DRWGQMPLPPYIRRYRGDEH 168
Query: 175 --RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT YA+ G+VAAPTAGLHFT LL ++ G+K+ +TL VG GTF PV+V
Sbjct: 169 GTIDRERYQTVYAREPGAVAAPTAGLHFTQALLEKIERDGVKIETLTLKVGTGTFQPVRV 228
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINP-WS 290
+H M SE + A+ + K++ GR++ VGTT +R LE A DGI N +
Sbjct: 229 GQVAEHRMESESYVLPDQCVSAIVAAKAKQGRVIGVGTTVVRTLEHAARASDGIENAAGA 288
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G +IFI PG+RF VD +++NFHLP+ST +++ +AF G E + Y+ A+ +RFYSY
Sbjct: 289 GKADIFIYPGFRFHVVDAMLTNFHLPRSTPILMAAAFAGRERLLQAYEFAVRQRFRFYSY 348
Query: 351 GDTSLLF 357
GD L+
Sbjct: 349 GDAMLIT 355
>gi|206889691|ref|YP_002248710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226713854|sp|B5YKE5|QUEA_THEYD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|206741629|gb|ACI20686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 345
Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats.
Identities = 130/362 (35%), Positives = 186/362 (51%), Gaps = 22/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + E ++ LP IA +P+ RD +RL+V+H N I + ++ +LN D ++
Sbjct: 1 MKITELNYTLPTDLIAQKPLSERDKSRLLVLHKNTG---EIEHRIFYEIVEYLNEGDILI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L + I W V + S +
Sbjct: 58 INNTKVIPARLIAEKPSGGKIEILLIKEK-KCSSQNVVWEVMTKGS-----------YEG 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + G ++ +++ ++ I+ G +PLPPYI R D DY
Sbjct: 106 EVFIDEFIAELRNNCDGRYIVFKNMTSPKVRNLINEKGFMPLPPYIK--RKPIQSDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK+ GS+AAPTAGLHFT LL +IS G+K+ +TLHVG GTF P+KV+ +H M
Sbjct: 164 QTVYAKMNGSIAAPTAGLHFTKELLETIISKGVKLREITLHVGVGTFKPIKVDKLQEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-----EDGIINPWSGFTNI 295
E ID + + ++K G RI SVGTT+ R LE + G T+I
Sbjct: 224 DPEYFEIDKTLIEEIYAIKKAGKRIFSVGTTTTRALEGYASGKYEDRGSDNYKIKGSTDI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P + F+ VD L++NFHLPKST L +V AFC +++ KK Y+ AI YRF+SYGD L
Sbjct: 284 FIYPEFSFKIVDALITNFHLPKSTPLAMVYAFCEMQKVKKAYREAIEKGYRFFSYGDAML 343
Query: 356 LF 357
+
Sbjct: 344 II 345
>gi|15604084|ref|NP_220599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
prowazekii str. Madrid E]
gi|7674179|sp|Q9ZDV6|QUEA_RICPR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|3860775|emb|CAA14676.1| S-ADENOSYLMETHIONINE:tRNA RIBOSYLTRANSFERASE-ISOMERASE (queA)
[Rickettsia prowazekii]
gi|292571808|gb|ADE29723.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Rickettsia
prowazekii Rp22]
Length = 383
Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats.
Identities = 144/404 (35%), Positives = 214/404 (52%), Gaps = 67/404 (16%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP + IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFNLPSALIAQYPSSERDNSDLLI------AGTKHIKTKFYNIIDYLKKGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+L+ K I+ L+ ++S N W +A+P++ + GD +F
Sbjct: 55 FNNSKVIKAKLH---------LGKNITINLNKKLSDNCWIAFAKPARKLNIGDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP--------- 171
+ + +K GEI + F + I + + + G IPLP YI R P
Sbjct: 103 ---DTHKIIITEKLAIGEIKVKFMLDNISIIKFLDKYGEIPLPFYIKRPSPVCYSNMALC 159
Query: 172 ------------------------------------IDARDYVDYQTTYAKIQGSVAAPT 195
D YQT Y++I+GSVAAPT
Sbjct: 160 CKPENTLKIKSIPHNMSKIVTNNSNTVNLRSNDGIIDSTNDNDRYQTIYSQIEGSVAAPT 219
Query: 196 AGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQAL 255
AGLHFT N+L +L + G+ FVTLHVGAGTF+PVK E+ +H MH+E I TA+ +
Sbjct: 220 AGLHFTKNILDKLKTKGVHTAFVTLHVGAGTFLPVKTENIHEHKMHTEYCSITTETAEII 279
Query: 256 NSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHL 315
N K G I++VGTT+LR +E+A +GI+ + T+IFITPG+ F+ VD+L++NFH
Sbjct: 280 NKTKQEGRSIIAVGTTTLRTIESAC-NNGIVRAGNFETDIFITPGFNFQVVDMLLTNFHF 338
Query: 316 PKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
PKSTL +L+ AF G +E +Y++AI RF+SYGD +LL++K
Sbjct: 339 PKSTLFILICAFAGFKEMHALYKYAIKEKMRFFSYGDATLLYRK 382
>gi|300726827|ref|ZP_07060257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
gi|299775940|gb|EFI72520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
Length = 387
Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats.
Identities = 120/393 (30%), Positives = 180/393 (45%), Gaps = 42/393 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP-----------------VFPRDSARLMVVHPNLSCPLVISD 43
M + +F F LP +IAL P V RD +LMV+H +
Sbjct: 1 MKLSQFKFKLPQDQIALYPHQVEKTIKTSSGEKTFTVTRRDECKLMVLHKKSETIDIFKK 60
Query: 44 HL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHM 92
++ + + D V N+TKV A+L G + + + +I L
Sbjct: 61 DSNGNDIQGEYLDFRNVLDYFDDGDTFVLNDTKVFPARLYGTK----EKTDAKIEVFLLR 116
Query: 93 RVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISGI 148
++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 ELNEEMRLWDVLVEPARKIRIGNKLFF---DDSGSMVAEVIDNTTSRGRTLRFLYDSPHE 173
Query: 149 ELERQISLVGTIPLPPYIARKRPIDA---RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLL 205
E ++ + +G PLP Y+ R D D+Q +AK +G+V AP GLHF+ L+
Sbjct: 174 EFKQNLYALGEAPLPRYVIDSREDHHATVDDLDDFQCVFAKNEGAVTAPATGLHFSRELM 233
Query: 206 SRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRI 265
R+ GI F+TLH G G F ++VED H M SE I +N K G R+
Sbjct: 234 KRMEIKGINTAFITLHCGLGNFHDIEVEDLTKHKMDSEQMIIGREACDLVNDTKKAGHRV 293
Query: 266 VSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVS 325
+VGT+ ++ ETA DG + + G+TN FI P Y F D +++NF+ P+STLLM +
Sbjct: 294 CAVGTSVVKATETAVGTDGFLKEYDGWTNKFIFPPYDFGLADSMLANFYHPESTLLMETA 353
Query: 326 AFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
AF G + + Y A+ + Y+F YGD L+
Sbjct: 354 AFGGYDLVMEAYHKALENGYKFGCYGDAMLILN 386
>gi|33519694|ref|NP_878526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Blochmannia floridanus]
gi|46576954|sp|Q7VQB2|QUEA_BLOFL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33517357|emb|CAD83742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Blochmannia floridanus]
Length = 353
Score = 338 bits (867), Expect = 8e-91, Method: Composition-based stats.
Identities = 127/360 (35%), Positives = 197/360 (54%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F LP I+ P R RL+V I+ H SDLP LN D ++
Sbjct: 1 MRTSDFKFQLPKKLISRYPNLKRSECRLLVFDRLT---TKITHHFFSDLPEILNPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + K++ + ++ + S++++ G+ S
Sbjct: 58 FNDTRVIPARLYGY-----SVTGKKVEILIERILNDYQAVAHIYSSELVQLGEKFILGSN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + +I +I+ + ++ +G IP+PPY R + DY Y
Sbjct: 113 LNIYIYVIKIYYSYKLFKIYFD-NINYNNVLSLLNDIGHIPIPPYF--HRLDEIIDYELY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y GS+AAPTAGLHF + L++RL+++GI++ F+TLH+G+ TF PV+V + H+M
Sbjct: 170 QTVYGSKLGSIAAPTAGLHFDTLLINRLLNLGIEISFITLHIGSATFQPVRVTLIEHHVM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG---IINPWSGFTNIFI 297
H E + T +++ K R R+++VGTT ++ LETA II +SG++ IFI
Sbjct: 230 HDEYIEVSQSTIESILRCKERKNRVIAVGTTVVKALETAAMNTKSLSIIESFSGYSRIFI 289
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF+ VD L++NFHLP+STL+MLV+AF G ++Y AI Y+F SYGD+ +
Sbjct: 290 FPGYRFKIVDSLITNFHLPESTLIMLVAAFAGYRNILRVYNAAIDLNYKFLSYGDSMFIT 349
>gi|78186439|ref|YP_374482.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
gi|91207390|sp|Q3B5E2|QUEA_PELLD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78166341|gb|ABB23439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
Length = 341
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 128/360 (35%), Positives = 187/360 (51%), Gaps = 22/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R S RL+V+ +S +L FL D +V
Sbjct: 1 MRVADFDYPLPEERIAKYPPLQRGSTRLLVICREGGT---VSHARYRELDTFLRKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L + I L + V R +K+GD L
Sbjct: 58 LNNTRVVKARLMAEKS-----TGAAIELMLLEKHGQEQSLVLFR--GRVKQGDRLR---S 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ++D L G ++ +P+PPY+ +RP + D Y
Sbjct: 108 HGHEFLVEEIVDHGVARLSL----PEGRSIQPVFEAHAEVPIPPYL--RRPAEPVDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GSVAAPTA L+ T LL RL G++ +TLHVG GTF+P++V+ ++H+M
Sbjct: 162 QTVFAEHAGSVAAPTASLNMTPELLLRLRDGGVETSSITLHVGLGTFLPIRVDSMEEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGIINPWSGFTNIFI 297
H E I A T + + + K+ GGRI+++GTT R LE A + P G +IFI
Sbjct: 222 HREFYSIPAATIEKIRATKASGGRIIALGTTVTRALEHAALSLSGHSGPGPLEGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG FR +D L++NFH P+ST+LML +AF G + ++ Y+ A+ YRF SYGD++L+
Sbjct: 282 YPGCSFRLIDALLTNFHAPRSTVLMLTAAFAGPDLLRRAYREALDKEYRFLSYGDSTLIL 341
>gi|187735219|ref|YP_001877331.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Akkermansia
muciniphila ATCC BAA-835]
gi|187425271|gb|ACD04550.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Akkermansia
muciniphila ATCC BAA-835]
Length = 329
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 132/362 (36%), Positives = 187/362 (51%), Gaps = 38/362 (10%)
Query: 1 MMVK----EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M + +FD+ LP IA RP+ R ++R+MV+H + +I DLP ++
Sbjct: 1 MHLAVRTIDFDYPLPEELIADRPLPDRSASRMMVIHRDTG---MIEHRHFCDLPEYVREG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D + N+T+V+ A+ + I ++P W RP + +K G +
Sbjct: 58 DHFILNDTRVVPARYF--------SNDGSIEIVRAEVLNPLLWKCMVRPGRKMKLGRTVA 109
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G++ ID+ G L+ F E G + LP Y+ R D D
Sbjct: 110 V----GEAVGTVEGIDE--EGYRLIRFDREVDE-----EKYGRLALPHYMN--RESDPSD 156
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ +G++AAPTAGLHFT LL+ + F+TLHVG GTF PVK + +
Sbjct: 157 RERYQTVYARHEGAIAAPTAGLHFTPELLASV-----PHDFLTLHVGVGTFRPVKADRIE 211
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-NPWSGFTNI 295
DH MH+E F+ + R+++VGTTS+R+LE T +G+ SG TNI
Sbjct: 212 DHQMHTEHFFLPEAA----ARAVNNARRVIAVGTTSVRVLEHVATAEGLPLRECSGSTNI 267
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y ++ VD L++NFHLP+STLLMLVSAF G E K Y AI YRF+SYGD L
Sbjct: 268 FIYPPYNYKVVDALITNFHLPQSTLLMLVSAFAGRELVMKAYLEAIRERYRFFSYGDCML 327
Query: 356 LF 357
+
Sbjct: 328 IL 329
>gi|51473411|ref|YP_067168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
typhi str. Wilmington]
gi|81610818|sp|Q68XF6|QUEA_RICTY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51459723|gb|AAU03686.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Rickettsia
typhi str. Wilmington]
Length = 375
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 141/396 (35%), Positives = 214/396 (54%), Gaps = 59/396 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF++P + IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFNVPNALIAQYPSSERDNSDLLI------AGTKHIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+L+ K I+ L+ ++S N W +A+P++ + GD +F
Sbjct: 55 FNNSKVIKAKLH---------LGKNITINLNKKLSDNCWGAFAKPARKLNIGDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI-------------- 166
+ + +K GEI + F ++ I + + + G +PLP YI
Sbjct: 103 ---DTHKIIITEKLAMGEIKVKFILNNISMIKFLDKYGEMPLPFYIKRTSSVCCSNMALF 159
Query: 167 -----------------------ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSN 203
D YQT Y++I+GSVAAPTAGLHFT +
Sbjct: 160 CDHDNTLKITSISHNSNTVNFRSTDSMIDSTNDNDRYQTIYSQIEGSVAAPTAGLHFTKD 219
Query: 204 LLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGG 263
+L +L + GI FVTLHVGAGTF+PVK E+ H MH+E I A TA+ +N K +G
Sbjct: 220 ILDKLKTKGINTAFVTLHVGAGTFLPVKTENIHKHKMHTEYCSITAETAEIINKTKQKGR 279
Query: 264 RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLML 323
I++VGTT+LR LE+ + +GI+ + T+IFITPG+ F+ VD+L++NFH PKSTL +L
Sbjct: 280 DIIAVGTTTLRTLES-SCNNGIVKAGNFETDIFITPGFNFQIVDMLLTNFHFPKSTLFIL 338
Query: 324 VSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ AF G +E +Y++AI RF+SYGD +LL++K
Sbjct: 339 ICAFAGFKEMHALYKYAIKEKMRFFSYGDATLLYRK 374
>gi|302036375|ref|YP_003796697.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Nitrospira defluvii]
gi|300604439|emb|CBK40771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Nitrospira defluvii]
Length = 346
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 135/356 (37%), Positives = 194/356 (54%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ EFDF P +A PV PRD ARL+V+ L V+DLP+ L S D +V
Sbjct: 1 MLLSEFDFPFDPVLVADHPVIPRDRARLLVLDRQGGERL---HRQVADLPSLLQSGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A++ + + + + W V + + G ++ F
Sbjct: 58 VNNTKVMPARV----PAQVRSNGRLLDLLFVEDLGQGLWEVLIK--GRFRPGAVIEFPGG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+E + + V + + GT+PLPPYI R A D Y
Sbjct: 112 GTGEIVERSRLRTT-------VRVWGVTSVYELMQATGTMPLPPYIK--REPSADDQEWY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G++AAPTAGLHFT L+ L GI++ VTLHVG GTF VK E +DH M
Sbjct: 163 QTMFAQHEGAIAAPTAGLHFTRELVQALTGKGIELAEVTLHVGPGTFRSVKTERIEDHRM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
+E + A T + + V+ RG R+V+VGTT +R LETA I P+ G +FITPG
Sbjct: 223 LAERIEVSAQTVEQIRRVRERGHRVVAVGTTVVRALETAGRGGRGIEPFQGQAELFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ +D +++NFHLP++TLLMLVSAF G++ + Y+ A++ YRFYSYGD L+
Sbjct: 283 FEFQVIDAMVTNFHLPRTTLLMLVSAFVGVQPLRAAYEEAVAERYRFYSYGDAMLI 338
>gi|194333528|ref|YP_002015388.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
gi|194311346|gb|ACF45741.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
Length = 341
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 129/359 (35%), Positives = 192/359 (53%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP S IAL P R + RL V+ I+ +DL FL D +V
Sbjct: 1 MNVSDFDYELPESSIALYPPAERGTTRLEVLCRETGS---ITHARYADLHRFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L + + +I L + + V R +K+GDIL
Sbjct: 58 LNNTRVILARLFASK-----KTGAKIELVLLEKHERDQNLVMYR--GRLKRGDILI---S 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L +++ L SG ++ +P+PPY+ +R + D Y
Sbjct: 108 HGEELLVDSLVGNGIASVSCL----SGRQIASFFQEFAEVPIPPYL--RRDAEEVDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+I GSVAAPTA L+ T L+ L G+++ +TLHVG GTFMP++V+D H+M
Sbjct: 162 QTVFAEIPGSVAAPTASLNMTPELIDTLRLKGVQIASITLHVGLGTFMPIRVDDLASHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINPWSGFTNIFI 297
H E I A+ + R R+++VGTT R LE A+ + P G +IFI
Sbjct: 222 HREYYDIPVSVVSAIRDARDRRKRVIAVGTTVTRALEHASQTVLHTNPVMPVRGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ +D L++N+H P+ST+LML +AF G + +K YQ A+ + YRF SYGD+ L+
Sbjct: 282 YPGYQFQTIDALVTNYHAPRSTVLMLTAAFAGWDLLRKGYQEALQNDYRFLSYGDSMLI 340
>gi|302335516|ref|YP_003800723.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Olsenella
uli DSM 7084]
gi|301319356|gb|ADK67843.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Olsenella
uli DSM 7084]
Length = 387
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 120/393 (30%), Positives = 186/393 (47%), Gaps = 44/393 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP S IA P PRD+ RL+V+ + +DL +L D +V
Sbjct: 1 MRTDDFDYPLPDSLIAQVPCEPRDACRLLVLDRKDGS---VEHRRFTDLVDYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM-RVSPNSWSVYARPSKVIKKGDILHFFS 119
N T+V+ A+L G + E + + W +P K +K+G ++ +
Sbjct: 58 ANRTRVLPARLMGHKRGTGGVSETLLLARREDVDALGHVWECLVKPGKRLKQGAVVEYRE 117
Query: 120 QDGQSRLEA---------TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+ ++ +D+ G ++ + G+ L+ I G +PLPPYI
Sbjct: 118 GGIHAPMDWPVVLTGEVIDYVDESRGGRLVRFEPVGGLSLDEAIHRAGHVPLPPYITDY- 176
Query: 171 PIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D YQT Y+ + + S AAPTAGLHFT L+ R+ I V L VG TF
Sbjct: 177 ---EGDPERYQTVYSMREEHSAAAPTAGLHFTPELIKRIRGRDIDFRTVELEVGIDTFRL 233
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG----- 284
V+ +D H MH+E + A+++ K+ G R+++VGTTS+R LE+A D
Sbjct: 234 VEEDDPTQHAMHTERYHVGRGVVDAVHATKAAGHRVIAVGTTSVRSLESAFDPDVPAWGT 293
Query: 285 --IINPWSGF-------------------TNIFITPGYRFRAVDILMSNFHLPKSTLLML 323
+ G T++++ PG F VD +++NFH+P+STL+ML
Sbjct: 294 PVCARRFEGARDSARLLGRGDIVERVDATTDLYLMPGSTFHVVDAMITNFHVPRSTLMML 353
Query: 324 VSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VSAF E+ YQ A++ YRF S+GD L+
Sbjct: 354 VSAFATREQIMGAYQAAMNEGYRFLSFGDAMLI 386
>gi|28895709|ref|NP_802059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes SSI-1]
gi|28810958|dbj|BAC63892.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes SSI-1]
Length = 305
Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats.
Identities = 137/317 (43%), Positives = 189/317 (59%), Gaps = 14/317 (4%)
Query: 41 ISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS 100
+ D + LN DA+V NNT+V+ A+L G + + L + W
Sbjct: 1 MVDSHFDHIIDQLNPGDALVMNNTRVLPARLYGEKP----DTHGHVELLLLKNTQGDQWE 56
Query: 101 VYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
V A+P+K +K G ++F G L+AT+ID+ G ++ FS GI + +G +
Sbjct: 57 VLAKPAKRLKVGSQVNF----GDGHLKATIIDELEHGGRIVEFSYDGI-FLEVLESLGEM 111
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPYI K YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TL
Sbjct: 112 PLPPYIHEKLED----AERYQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTL 167
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVG GTF PV V++ D+H MHSE + AQ L VK GGR+V+VGTTS+R LET
Sbjct: 168 HVGLGTFRPVSVDNLDEHDMHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIG 227
Query: 281 TE-DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
++ G I SG+TNIFI PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+H
Sbjct: 228 SKFQGDIQADSGWTNIFIKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRH 287
Query: 340 AISHAYRFYSYGDTSLL 356
A+ YRF+S+GD +
Sbjct: 288 AVDEKYRFFSFGDAMFV 304
>gi|328955738|ref|YP_004373071.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Coriobacterium glomerans PW2]
gi|328456062|gb|AEB07256.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Coriobacterium glomerans PW2]
Length = 403
Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats.
Identities = 128/410 (31%), Positives = 190/410 (46%), Gaps = 62/410 (15%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPN-------LSCPLVISDHLVSDLPAFL 53
M +FD+DLP IA PV PRDS R++V+H I SD+ +L
Sbjct: 1 MRTDDFDYDLPEELIAQAPVEPRDSCRMLVMHRRVASAAAAADARGDIEHRRFSDIIDYL 60
Query: 54 NSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVYARPSKV 108
D +V N T+V+ A+L G + L R + W P +
Sbjct: 61 APGDLLVANETRVMPARLVGTK----RETGGVAETLLLKRREDLDALGSVWECLVSPGRR 116
Query: 109 IKKGDILHFFSQDGQSRLEATVIDKWN--------TGEILLVFSISGIE-------LERQ 153
++ G ++ + + + ++A + G L+ F G E L+
Sbjct: 117 LRPGSVIEYRAGGLHAPVQAPPVLIGQIEAFVENSKGGRLVRFHPVGSEALDGPCTLDAA 176
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIG 212
I G +PLPPYI D +YQT Y+ + + S AAPTAGLHFT L+ RL + G
Sbjct: 177 IHAAGHVPLPPYITSY----EGDPENYQTVYSMREEHSAAAPTAGLHFTEELIDRLRAKG 232
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
+ V L VG TF V+ +D DH+MH+E + A +A+ + K+ GGR+V+VGTT+
Sbjct: 233 VGWKTVELEVGIDTFRLVQEDDPTDHVMHTERYHVSADVIEAVRATKAGGGRVVAVGTTA 292
Query: 273 LRLLETAT------------------TEDGIINPWSGF--------TNIFITPGYRFRAV 306
+R LE+A D +G T++++ PG F V
Sbjct: 293 VRSLESAFDTMRPASQPPVVARLFENAPDSAAVCCAGDLVERRDATTSLYLMPGSTFHVV 352
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
D L++NFH+P+STL+MLVSAF E+ Y A+ YRF S+GD +
Sbjct: 353 DALITNFHVPRSTLMMLVSAFASREQIMDAYAQAVRERYRFLSFGDAMFI 402
>gi|289523146|ref|ZP_06440000.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503689|gb|EFD24853.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 313
Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats.
Identities = 129/331 (38%), Positives = 178/331 (53%), Gaps = 20/331 (6%)
Query: 29 MVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISC 88
MV++ C + ++ +L D +VFN+TKVI A+ G + ++
Sbjct: 1 MVLNRRERC---LEHACFYEIIKYLRRGDVLVFNDTKVIPARFLGQK-----PTGAKVEV 52
Query: 89 TLHMRVS--PNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS 146
L W RP K ++ GD + V+D+ + G L+
Sbjct: 53 LLVKPKDSAWEHWEAMVRPGKRLESGDEVVI-----DDEASILVLDRLSQGMRLVRIK-G 106
Query: 147 GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLS 206
I G +PLPPYI YQT YA++ GSVAAPTAG HFT LL
Sbjct: 107 KDTPYNIIEKKGKVPLPPYIRGNGRAS----EYYQTVYARVDGSVAAPTAGFHFTEELLD 162
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
L S GI++ +VTLHVG GTF PVKV+D H MH E I + TA+ +N K G RI+
Sbjct: 163 ELRSCGIELAYVTLHVGPGTFRPVKVDDVRKHEMHCEDYHISSDTAETINRAKKEGRRII 222
Query: 267 SVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSA 326
+VGTT +R LE+++ E+G + G T++FI PGY+F+ VD +++NFHLPKSTLLMLVSA
Sbjct: 223 AVGTTVVRCLESSSDEEGFVLFGKGSTDLFIFPGYKFKVVDGMVTNFHLPKSTLLMLVSA 282
Query: 327 FCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F G + + Y+ AI YRFYS+GD L+
Sbjct: 283 FAGYDFVMEAYKVAIERRYRFYSFGDAMLII 313
>gi|297517232|ref|ZP_06935618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli OP50]
Length = 319
Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats.
Identities = 124/319 (38%), Positives = 180/319 (56%), Gaps = 14/319 (4%)
Query: 41 ISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS 100
++ +DL LN D +VFNNT+VI A+L G + +I + +
Sbjct: 1 MTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRIL 55
Query: 101 VYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
+ R SK K G L + G + V + ++ +G +
Sbjct: 56 AHIRASKAPKPGAELLLGDDE-----SINATMTARHGALFEVEFNDERSVLDILNSIGHM 110
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPYI RP + D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTL
Sbjct: 111 PLPPYI--DRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTL 168
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVGAGTF PV+V+ +DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A
Sbjct: 169 HVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAA 228
Query: 281 --TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
++ +I P+ T IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+
Sbjct: 229 QAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYK 288
Query: 339 HAISHAYRFYSYGDTSLLF 357
A+ YRF+SYGD +
Sbjct: 289 AAVEEKYRFFSYGDAMFIT 307
>gi|298531020|ref|ZP_07018421.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfonatronospira thiodismutans ASO3-1]
gi|298509043|gb|EFI32948.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfonatronospira thiodismutans ASO3-1]
Length = 360
Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats.
Identities = 120/362 (33%), Positives = 193/362 (53%), Gaps = 19/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++L P+RIA P R +RL+++ + + ++ L +V N
Sbjct: 9 LENYDYELDPARIASWPTPDRSESRLLMLDRQGG---ELQEDRFENIDQHLEPGSLLVVN 65
Query: 63 NTKVITAQLNGVRFCHINRR------EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
N+KV+ A+L G + + IS + R R S+ + GD ++
Sbjct: 66 NSKVLPARLMGHKESSGSVEFLLLTPLPLISPAMENREKKARVECLVRASRRPRPGDWVY 125
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F + ++ + G +G +L G +PLPPYI R + +D
Sbjct: 126 FAE-----NVRFRLVQDLDQGRAKGDLFWTG-DLGDFFVRYGHVPLPPYIK--RQDEPQD 177
Query: 177 YVDYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA QGSVAAPTAG+HFT L RL +G V L+VG GTF PVK D
Sbjct: 178 VNRYQTVYAHPDKQGSVAAPTAGMHFTPKLCHRLEDLGCMWAEVCLYVGYGTFSPVKSAD 237
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H+MH E + + A+++ + +++G ++V+VGTT++R LE+ G + P++G+++
Sbjct: 238 IRQHVMHPEYIEVGSQAAESIRAARAQGRKVVAVGTTTVRTLESVCRMKGRVEPFTGWSD 297
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
++I PG++F AVD L++NFHLPKS+LL++VSAF G + YQ+A +RF+SYGD
Sbjct: 298 LYIYPGFKFEAVDQLITNFHLPKSSLLIMVSAFAGRRKILHSYQYAREKGFRFFSYGDAM 357
Query: 355 LL 356
+
Sbjct: 358 FI 359
>gi|194335961|ref|YP_002017755.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
gi|238693403|sp|B4SEZ1|QUEA_PELPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194308438|gb|ACF43138.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 341
Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats.
Identities = 125/359 (34%), Positives = 183/359 (50%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++L +IA P R S RL+V++ + + + L FL D +V
Sbjct: 1 MRTGDFDYELSEEKIAKYPPAERGSTRLLVLNRHSGA---VVHASYASLDLFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L + I L + V R +KKGD L Q
Sbjct: 58 LNNTRVLRARLYASKS-----TGARIELMLLEKHQEEQNRVLYR--GKLKKGDKLMAHDQ 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L ++D + L G +P+PPY+ R + D Y
Sbjct: 111 E---LLVTDIVDHGIARIAV----CGERSLSDLFERFGGVPIPPYLK--RDAEEVDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A++ GSVAAPTA L+ TS LL L G+ + +TLHVG GTF+PV+ + ++H+M
Sbjct: 162 QTVFAELPGSVAAPTASLNMTSELLDTLRRKGVDMVTLTLHVGLGTFLPVRADALEEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN---PWSGFTNIFI 297
H E I A + + VK+ GGR+++VGTT R LE A P +G +IFI
Sbjct: 222 HREYYSIPATLVEKIRKVKTTGGRVIAVGTTVTRALEHAGERMETFTGDAPLTGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+FR +D L++NFH P+ST+LML +AF G + + YQ A+ YRF SYGD+ +
Sbjct: 282 YPGYQFRIIDCLLTNFHAPRSTVLMLTAAFAGPDHLRNAYQKALEEGYRFLSYGDSMFI 340
>gi|257784681|ref|YP_003179898.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Atopobium
parvulum DSM 20469]
gi|257473188|gb|ACV51307.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Atopobium
parvulum DSM 20469]
Length = 387
Score = 335 bits (858), Expect = 9e-90, Method: Composition-based stats.
Identities = 126/398 (31%), Positives = 189/398 (47%), Gaps = 52/398 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP RIA P PRDS RL+V+H I +D+ +L+ D +V
Sbjct: 1 MRTDDFDYNLPEERIAQTPAEPRDSCRLLVLHREDG---RIEHKRFTDIVEYLDPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVYARPSKVIKKGDIL 115
N T+V+ A+L G + L R + W P K +K G ++
Sbjct: 58 VNQTRVMPARLVGKK----QNTGGVSETLLLKRREDIDALGSVWECLVNPGKRLKPGAVI 113
Query: 116 HFFSQDGQS------RLEATVID--KWNTGEILLVFSISGI-ELERQISLVGTIPLPPYI 166
+ + + L T++D N G L+ F G L+ I G +PLPPYI
Sbjct: 114 EYRAGGLHAPDSAPVVLTGTIVDFVDDNRGGRLVRFEAQGERTLDEAIHEAGHVPLPPYI 173
Query: 167 ARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ D YQT YA + + S AAPTAGLHFT L+ + + G++ V L VG
Sbjct: 174 TQY----EGDPEKYQTVYAMQDEHSAAAPTAGLHFTPKLIETIKAKGVQWASVELEVGID 229
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-------- 277
TF V +D H++H+E + +A+ + K+ G +++++GTTS+R LE
Sbjct: 230 TFRLVTEDDPTKHVIHTERYHVAPEVVEAVKATKAAGHKVIAIGTTSVRSLESTWDSQLP 289
Query: 278 -----------------TATTEDGIINPWS-GFTNIFITPGYRFRAVDILMSNFHLPKST 319
A T G + TN+++ PG F VD +++NFH+P+ST
Sbjct: 290 ADEPPVVAHRFEEAEDSAAVTHKGDMVARENATTNLYLMPGSTFHVVDTMVTNFHVPRST 349
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L+MLVSAF E+ YQ AI YRF S+GD ++
Sbjct: 350 LMMLVSAFATREQIMNAYQSAIDEKYRFLSFGDAMIII 387
>gi|78188896|ref|YP_379234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
gi|78171095|gb|ABB28191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
Length = 346
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 117/359 (32%), Positives = 180/359 (50%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F ++LP +IA PRD+ +LMV++ I D+ ++L D +V
Sbjct: 1 MRLSNFRYNLPRHKIANELCEPRDNCKLMVLNRRK---KEIEHKQFEDIASYLKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYARPSKVIKKGDILHFF 118
NN+KV A++ G + + + +I L W V P++ ++ G+ ++F
Sbjct: 58 LNNSKVFPAKIFGQK----EKTDAKIEVFLLRVLNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I + + +GTIPLPPY R D
Sbjct: 113 ----EEDVVAEVVDNTTSRGRTIRFLNPDINVFELVDRIGTIPLPPYFN--RAPRPSDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A G+V AP AGLHFT L + +G+K+ +TLH TF ++VED H
Sbjct: 167 HYQTVFASEIGAVVAPMAGLHFTMPQLQAIQKMGVKILPITLHPSLSTFSAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K R+++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFHIPYQTAMEINETKLSKSGRVIAVGTTTCRVLEANATVDGKIKFGKGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++ F LP++TL+M VSAF Y+ A+ Y+F +YGD +
Sbjct: 287 YPPYQFKVTDCLLTTFQLPETTLMMAVSAFADHRLLMDAYKIALKEDYQFLAYGDMMFI 345
>gi|294674502|ref|YP_003575118.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
ruminicola 23]
gi|294471740|gb|ADE81129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
ruminicola 23]
Length = 354
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 122/361 (33%), Positives = 186/361 (51%), Gaps = 13/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P F RD +LMV+H D ++ + + +DA +
Sbjct: 1 MKLSQFKFKLPEEQIALEPPFHRDECKLMVLHRKSKRIESGLD--FRNILDYFDEDDAFI 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + + +I L ++ + W V P++ I+ G+ L F
Sbjct: 59 FNDTKVFPARLYGTK----EKTDAKIEVFLLRELNADQRLWDVLVEPARKIRIGNKLFFE 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVF--SISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ A VID + L F E ++ + +G PLP YI +RP D
Sbjct: 115 E---DGPMVAEVIDNTTSRGRTLRFLYDCPHDEFKQMLFGLGEAPLPRYIIDRRPATEED 171
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
++QT YAK +G+V AP GLHF+ L+ R+ GI F+TLH G G F ++VED
Sbjct: 172 MTNFQTIYAKNEGAVTAPATGLHFSRELMKRMEIKGINFAFITLHCGLGNFDAIEVEDLT 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI A + +N K G R+ VG ++ R E+A DG++ + G+TN F
Sbjct: 232 KHKMSSEQMFIPAEACEIVNKAKEEGHRVCCVGVSTARATESAVGTDGMLKEFEGWTNKF 291
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + L+ NF+ P+S ++M ++F G + + YQ A+ Y+F YGD L+
Sbjct: 292 IFPPYEFGLCNALIGNFYHPESPMMMTEASFAGYDLLYEGYQRALKEGYKFGCYGDALLM 351
Query: 357 F 357
Sbjct: 352 L 352
>gi|145219412|ref|YP_001130121.1| queuosine biosynthesis protein [Prosthecochloris vibrioformis DSM
265]
gi|189038873|sp|A4SDR0|QUEA_PROVI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145205576|gb|ABP36619.1| Queuosine biosynthesis protein [Chlorobium phaeovibrioides DSM 265]
Length = 341
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 128/360 (35%), Positives = 189/360 (52%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R + RL+V++ + + S+L AFL D +V
Sbjct: 1 MKVSDFDYSLPEERIAKYPPDNRGATRLLVLNRHTGS---VQHARYSNLEAFLGYGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L V+ + I L + R +KKGD L
Sbjct: 58 INTTKVVRARLFAVK-----QTGAAIELMLLEKHEGPQNLALYR--GRLKKGDRLLAHGH 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ +I + G+ + S+ GIE + +P+PPY+ R +A D
Sbjct: 111 E--------LIVEELAGQGVARLSVEGIESVHALFQNHAEVPIPPYLK--RDAEAVDRER 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ GSVAAPTA L+ T LL +L G+ +TLHVG GTF+P++ E ++H+
Sbjct: 161 YQTVFAEHPGSVAAPTASLNMTPELLLKLEKGGVATAVMTLHVGLGTFLPIRTETMEEHV 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE---DGIINPWSGFTNIF 296
MH E I A T + ++ + GGR+V++GTT R LE A T +P G +IF
Sbjct: 221 MHREFYSIPARTIEQIHETRRSGGRVVALGTTVTRALEHAATRISAFSGSDPLVGEADIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ +D L++NFH P+ST+LML +AF G + + Y+ A+ Y F SYGD+ L+
Sbjct: 281 IHPGYSFQTIDALLTNFHAPRSTVLMLTAAFAGADHLRAAYREAVEKRYDFLSYGDSMLI 340
>gi|288929542|ref|ZP_06423386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 317 str. F0108]
gi|288329047|gb|EFC67634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 317 str. F0108]
Length = 388
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 125/394 (31%), Positives = 186/394 (47%), Gaps = 43/394 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F+F LP IAL P + RD RLMV+H +
Sbjct: 1 MKLSQFNFKLPQELIALYPNSVYHEIKNEKGEKEMSRLTRRDECRLMVLHKKSGTIDLFR 60
Query: 43 DH-----------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ + + D +FN+TKV A+L G++ + + +I L
Sbjct: 61 KDKKGKPIKGDFLQFRDVIDYFDEGDTFIFNDTKVFPARLYGMK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DDSGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPI---DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R + +G PLP YI KR D D+QT YA +G+V AP GLHF+ L
Sbjct: 174 DEFKRSLFALGESPLPRYIIDKRENHHGTEEDMEDFQTIYAANEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
L R+ GI F+TLH G G F ++VED H + SE I A +N K+ G R
Sbjct: 234 LKRMEIRGINSAFITLHCGLGNFHDIEVEDLTKHKVDSESMHIGAEACAIVNKTKAEGRR 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ ++GT+ ++ ETA DG++ ++G+TN FI P Y F D +M+NF+ P STLLM
Sbjct: 294 VCAIGTSVVKATETAVGTDGMLKEYTGWTNRFIFPPYDFGLADTMMANFYHPLSTLLMST 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+AF G + + Y+ A+ + Y+F +GD L+
Sbjct: 354 AAFGGYDLVMEAYRLAVENEYKFGCFGDALLILN 387
>gi|300871265|ref|YP_003786138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brachyspira
pilosicoli 95/1000]
gi|300688966|gb|ADK31637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brachyspira
pilosicoli 95/1000]
Length = 358
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 197/360 (54%), Gaps = 19/360 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
++F LP + IA P + RD +LM ++ N + + SD+ +LN ND +V N++K
Sbjct: 10 YNFYLPENLIATTPNYERDHCKLMTINKNTG---EVEHKIFSDIINYLNKNDILVLNDSK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--FSQDGQ 123
VI A++ + N EI S + W + K IK+ DIL+ +
Sbjct: 67 VIPARIYAKKNTGGN---AEILLLNKFNNSEDLWECLIK-GKNIKENDILYLDYSHIENI 122
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP------IDARDY 177
+EA++I K N L+ FS + +G IPLPPYI + R + +D
Sbjct: 123 GIIEASII-KDNISTKLIKFSKPLTS--NILDTIGKIPLPPYIIQSRKKKGEEEYNDKDK 179
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ YAK +GS+A+PT+GLHFT LL ++ S+GI + +VTLHVG TF P+K ED
Sbjct: 180 EFYQNVYAKNEGSIASPTSGLHFTKELLEKIKSLGITICYVTLHVGFSTFNPIKEEDLKK 239
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH E I TA + + K G RIVS GTT R+LE+ D N G TNIFI
Sbjct: 240 HVMHEEKFSIPKETASIIINAKKDGRRIVSCGTTVARVLESEY-NDFNFNRLEGSTNIFI 298
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y+F+ VD L++NFH P STLL +VSAF G + Y+ A+ + Y F+SYGD + L+
Sbjct: 299 YPPYKFKCVDALITNFHTPHSTLLAMVSAFAGYDNIMNAYKIAVENNYHFFSYGDATFLY 358
>gi|260654964|ref|ZP_05860452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Jonquetella
anthropi E3_33 E1]
gi|260630279|gb|EEX48473.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Jonquetella
anthropi E3_33 E1]
Length = 361
Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats.
Identities = 130/351 (37%), Positives = 189/351 (53%), Gaps = 18/351 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+ +DLP +IA PV PRDS RLM + + + DL L +D +V N+T+
Sbjct: 28 YQYDLPQEQIAQVPVSPRDSCRLMTLDRRTG---RVGHKVFRDLLDLLRPDDLLVRNDTR 84
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ +L G + E+ L + N+W RP + + G + D Q
Sbjct: 85 VLAGRLTGRKISGT----AEVEVLLLRQEKENTWQALVRPGRRLPPGTEV-----DLQGA 135
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ + G L+ FS G++++ L G +PLPPYI + + DYQT YA
Sbjct: 136 IAVVGPSISDDGVRLVTFS-EGLDVKVWCDLHGQMPLPPYITSRESKND----DYQTVYA 190
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
K S AAPTAGLHFT LL+ + G+++ VTL VG GTF PV D H+MHSE
Sbjct: 191 KDANSAAAPTAGLHFTEGLLAAIREKGVQILDVTLEVGLGTFRPVSEPDIRRHVMHSERC 250
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
+ A T +A+ + KS G R+++VGTT +R LE + + + W T +FI PG+ ++
Sbjct: 251 RVPAATLEAIRAAKSTGRRVIAVGTTVVRTLEGLWSTGKVDDRWF-ETQLFIYPGFHYQV 309
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L++NFHLP STL+MLVSAF G E Y+ A++ YRF+S+GD +
Sbjct: 310 VDGLITNFHLPGSTLMMLVSAFGGYEPVMAAYREAVAKGYRFFSFGDAMFI 360
>gi|189500747|ref|YP_001960217.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
gi|189496188|gb|ACE04736.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
Length = 341
Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats.
Identities = 123/364 (33%), Positives = 189/364 (51%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ + LP S IA+ P R + RL V+ I+ L +DL F+ D +V
Sbjct: 1 MKVSDYAYLLPESSIAIYPPRDRGATRLEVLDRRTGA---ITHALYADLDRFVGPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKV-----IKKGDIL 115
NN+KV+ A+L + + L + + V R + +G L
Sbjct: 58 LNNSKVVNARLFAQK-----TTGARVELVLLEKHGEHQELVMYRGRLKSGDVLLSQGCRL 112
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S +G+ + D G + + G +P+PPY+ R ++
Sbjct: 113 FVESVEGEGVARISCSD--------------GRTVPDFFAEHGEVPIPPYLK--RDVEEV 156
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT +A+I GSVAAPTA L+ T LL+ L S G+++ +VTLHVG GTF+P++ +D
Sbjct: 157 DRERYQTVFAEIPGSVAAPTASLNMTGQLLNSLQSKGVELAYVTLHVGLGTFLPIRGDDL 216
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINPWSGF 292
+ H+MH E ++ + T + + +VK GGR+++VGTT R LE A + G +G
Sbjct: 217 EAHVMHREHYYLPSETVRKIQNVKKEGGRVIAVGTTVTRSLEHAASGINAPGDPKEITGE 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IFI PG F +D L++N+H P+ST+LML +AF G + KK Y A+ YRF SYGD
Sbjct: 277 ADIFIYPGCSFSVIDGLLTNYHAPRSTVLMLTAAFAGWDNLKKAYDEALEKGYRFLSYGD 336
Query: 353 TSLL 356
+ L+
Sbjct: 337 SMLI 340
>gi|325971231|ref|YP_004247422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Spirochaeta
sp. Buddy]
gi|324026469|gb|ADY13228.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Spirochaeta
sp. Buddy]
Length = 346
Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats.
Identities = 132/357 (36%), Positives = 196/357 (54%), Gaps = 13/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +KE+ FDLP IA P+ R RL+V+ + I D ++ ++L +V
Sbjct: 1 MTIKEYSFDLPEHLIAQTPIDRRGEDRLLVLDKHSGT---IIDEQMTHFASYLQEGSILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV A++ I+ + + +SW+V +K G F +
Sbjct: 58 VNNSKVRKARVFA-----ISETKSRVEFLFLEENLDHSWNVMVTKTKKQHVGKHYTFCTA 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + G + F+ E +G +PLPPYI R+ D Y
Sbjct: 113 DQSYVRTGCITKANEDGTRTITFNHVLDE--DFFLKLGHVPLPPYIKREDCF--ADENRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHFT +L+ + + G + VTLHVG GTF+PV+ ++ +DH M
Sbjct: 169 QTIYAQKEGSVAAPTAGLHFTQEILASIRAKGCTIVPVTLHVGPGTFLPVRTDNLEDHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
H E I+ +A+ +N K++G +IV+ GTTS+R LE+A TE G++ G TN+FI P
Sbjct: 229 HYESYEIEEESARIINQAKAQGRKIVATGTTSVRTLESAFNTETGLLESGQGRTNLFIRP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFH P+STLL+LVS F G E+ + Y+HA+ +YRF+SYGD +
Sbjct: 289 PYTFKIVDQLLTNFHTPESTLLVLVSTFAGKEKIDRAYRHAVEQSYRFFSYGDAMFI 345
>gi|78778786|ref|YP_396898.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9312]
gi|123554578|sp|Q31CD3|QUEA_PROM9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78712285|gb|ABB49462.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9312]
Length = 378
Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats.
Identities = 121/361 (33%), Positives = 184/361 (50%), Gaps = 10/361 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R +RLM+V ++ +++ +L D +V
Sbjct: 13 KLEAYDYFLDPSLIASKPSAIRHESRLMIVRNSVLEEDCLTNKFTKNLLDEFREGDLVVV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L + NR + + R W A+P+K +K L S
Sbjct: 73 NNTKVMKARL---KVELENRTL--VELLVLERSDECVWLCLAKPAKKLKINRKLKLKSPS 127
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQI---SLVGTIPLPPYIARKRPIDARDYV 178
Q TG + F + +L G IPLPPYI ++
Sbjct: 128 EQDINLMVDGVDEETGGRFIKFPENITDLNSMNNLLDKYGEIPLPPYIKNSEE-ESFHEN 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYAINPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLTNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+H E ++ + + +K RI+++GTTS+R LE+ + + P + + ++ I
Sbjct: 247 KLHKEWVSVNKEVVEEIKRIKKTDRRIIAIGTTSVRALESCYSHEINDFIPIAKYVDLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+FR VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 307 KPGYKFRVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYGDAMYIS 366
Query: 358 Q 358
Sbjct: 367 P 367
>gi|308233810|ref|ZP_07664547.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae DSM 15829]
gi|328943700|ref|ZP_08241165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae DSM 15829]
gi|327491669|gb|EGF23443.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae DSM 15829]
Length = 389
Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats.
Identities = 118/393 (30%), Positives = 186/393 (47%), Gaps = 44/393 (11%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD+ LP RIA P+ PRD+ +L+V+H I D+ ++ D IV
Sbjct: 4 RTDDFDYVLPQERIAQHPIEPRDACKLLVLHRTTG---EIEHRHFRDIADYMQEGDLIVA 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN-SWSVYARPSKVIKKGDILHFFSQ 120
N T+V+ A+L G++ E + W P K +K G + + +
Sbjct: 61 NKTRVLPARLVGLKHGGSAACETLLLKRREDLDPMGSVWECLVNPGKRLKLGACIDYRAG 120
Query: 121 DGQSRLEAT---------VIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
+ A ++ G ++ G+ L+ I G +PLPPYI
Sbjct: 121 GLHAPATADVVLRAEIMDYLENNRGGRLVKFTPAQGLSLDEAIHQAGHVPLPPYITNY-- 178
Query: 172 IDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D YQT Y+ K + S A+PTAGLHFT L+ R+ G++ V L VG TF V
Sbjct: 179 --EGDPEKYQTVYSMKEEHSAASPTAGLHFTPELIERIKQKGVQWKTVELEVGIDTFRLV 236
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---------- 280
+ +D H+MH+E + A+++ K+ G +++++GTTS+R LE+A
Sbjct: 237 EEDDPTQHVMHTERYHVSQDVVDAVHATKAAGHKVIAIGTTSVRSLESAFDCNATCSEPA 296
Query: 281 --------TEDGIINPWSGF--------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+D + G T+++I PGY + VD +++NFH+P+STL+M+V
Sbjct: 297 LCALNFEHAQDSCLLTHRGDIVKRENATTDLYIMPGYTWHVVDCMVTNFHVPRSTLMMMV 356
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
S+F E K YQ AI H YRF S+GD ++
Sbjct: 357 SSFASRELIMKAYQEAIEHEYRFLSFGDAMIML 389
>gi|291514902|emb|CBK64112.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alistipes
shahii WAL 8301]
Length = 336
Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats.
Identities = 126/346 (36%), Positives = 184/346 (53%), Gaps = 16/346 (4%)
Query: 16 ALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVR 75
A P RD +RLMV++ I + D+ + + D VFN+TKV A+L G +
Sbjct: 3 AKYPADNRDESRLMVINRAKGT---IEHRIFKDIIEYFDEKDLFVFNDTKVFPARLYGNK 59
Query: 76 FCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDK 133
+ EI L ++ W V P++ I+ G+ L+F D L A VID
Sbjct: 60 ----EKTGAEIEIFLLRELNRELRLWDVLVDPARKIRIGNKLYFGDDD---LLVAEVIDN 112
Query: 134 WNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSV 191
+ L F G E + + +G PLP + ++ D YQT +A+ +G+V
Sbjct: 113 TTSRGRTLRFLFDGSYEEFKHALFALGETPLPK--WVREKVEPEDAERYQTIFAEKEGAV 170
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPT 251
AAPTAG+HF+ +L+ R+ GI FVTLHVG G F V VED H M SE F++
Sbjct: 171 AAPTAGMHFSKHLMKRMEIKGIDKTFVTLHVGLGNFRTVDVEDLSKHKMDSEQFFVEEAA 230
Query: 252 AQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMS 311
A+A+N+ K + ++V++GTT +R +ETA + +G+I P G+TN FI Y F D +++
Sbjct: 231 AEAVNAAKRQERKVVAIGTTVMRTIETAVSTNGMIKPMEGWTNKFIFAPYEFTVADAMVT 290
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
N HLP ST LM+V+AF G E Y+ A YRF +YGD L+
Sbjct: 291 NLHLPYSTQLMMVAAFGGYETVMNAYKVAKEEGYRFGTYGDAMLIL 336
>gi|78189254|ref|YP_379592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
gi|91207418|sp|Q3AR26|QUEA_CHLCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78171453|gb|ABB28549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
Length = 341
Score = 331 bits (850), Expect = 7e-89, Method: Composition-based stats.
Identities = 128/359 (35%), Positives = 192/359 (53%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R S RL+V++ ++ L + L FL + D ++
Sbjct: 1 MQVADFDYHLPEERIAKYPPLERGSTRLLVLNRQSGA---LTHSLYAHLDTFLQAGDLLL 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L R I L R V R +K G++L
Sbjct: 58 LNNTRVVPARLFATRA-----TGATIELMLLERHHHREQLVLYR--GQLKAGEML----- 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
QS ++++ + + G +L + + G++P+PPY+ R +A D Y
Sbjct: 106 --QSHGHTLLVEEVLPQGLARLALADGGDLHQFFTQFGSVPIPPYLK--RNAEAVDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A GSVAAPTA L+ T LL RL + G+++ +TLHVG GTF+P++ E ++H+M
Sbjct: 162 QTVFAAHSGSVAAPTASLNMTPELLQRLKNNGVEIAHITLHVGLGTFLPIRTESLEEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGIINPWSGFTNIFI 297
H E + A + AL VK+ GGR+V+VGTT R LE + + G +IFI
Sbjct: 222 HRESYLLPAESVAALQRVKADGGRVVAVGTTVTRALEHSAPRILQSSAHAEIEGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF+ VD+L++NFH P+ST+LML +A G + + Y A+ Y F SYGD+ L+
Sbjct: 282 YPGYRFQMVDLLLTNFHAPRSTVLMLTAACAGTDNLRAAYSEAVLQGYNFLSYGDSMLI 340
>gi|262195614|ref|YP_003266823.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Haliangium
ochraceum DSM 14365]
gi|262078961|gb|ACY14930.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Haliangium
ochraceum DSM 14365]
Length = 368
Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats.
Identities = 128/377 (33%), Positives = 187/377 (49%), Gaps = 31/377 (8%)
Query: 1 MMV-KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M + ++ FDLP +IA P RD + L D D+ L ++ +
Sbjct: 1 MRLRSDYHFDLPDGQIAQLPSAQRDDS----RLLLLRAGAAAEDRGFRDIIDLLPADAVL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L + + + +R W R SK +++G L +
Sbjct: 57 VVNDTRVLPARLRARKHSGGAVELLFLE-RVEVRGVSEQWRCMGRSSKPLREGAQLRVLA 115
Query: 120 QDGQSRL------EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
D + L + ++ G +L+ + G + G +PLPPYIAR +
Sbjct: 116 SDAEGVLAETGDTVSIAGERGEDGTLLVDIAGDG---RLLLERAGELPLPPYIARPEGPE 172
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A+ G+VAAPTAGLHFT +L L + G + +TLHVG GTF+PV+ E
Sbjct: 173 TLDSERYQTIFARAPGAVAAPTAGLHFTPAILDALQAKGAAIAPLTLHVGPGTFLPVRTE 232
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP----- 288
+ H MH E + TA + + G +V+VGTT +R LE+A
Sbjct: 233 EIAAHHMHLERYEVPETTAALV----ASGRPVVAVGTTCVRALESAARAAARDQDRDRDD 288
Query: 289 -------WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
G T++FITPGYRFRAVD +++NFHLP+STLLMLV AF G Y+HA+
Sbjct: 289 GARRLAVGPGQTDLFITPGYRFRAVDWMVTNFHLPESTLLMLVCAFAGYRRVLDSYRHAV 348
Query: 342 SHAYRFYSYGDTSLLFQ 358
YRF+SYGD L+ +
Sbjct: 349 DAGYRFFSYGDAMLVER 365
>gi|157825416|ref|YP_001493136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
akari str. Hartford]
gi|166216746|sp|A8GMK3|QUEA_RICAH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157799374|gb|ABV74628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
akari str. Hartford]
Length = 371
Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 139/393 (35%), Positives = 213/393 (54%), Gaps = 56/393 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF+LP IA P RD++ L++ + ++ +L D +V
Sbjct: 1 MKLSAFDFNLPSELIAQSPSSERDNSDLLI------AAMPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KVI A+L+ + ++ L+ ++S +SWS +A+P++ + D +F
Sbjct: 55 LNNSKVIKAKLHLWK---------NVTINLNQKLSDDSWSAFAKPTRKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA------ 174
+ + +K GEI + F + I + + G +PLP YI R +
Sbjct: 103 ---DNHKVIITEKLVMGEIKVKFDLDNISVFEFLDKYGEMPLPVYIRRSHSLYHTTSTLC 159
Query: 175 ----------------------------RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLS 206
D YQT Y++I+GSVAAPTAGLHFT+++L
Sbjct: 160 HTRENGYSEKLDAFFRRNDIKDKDNDIVYDNERYQTIYSQIEGSVAAPTAGLHFTNDILD 219
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
+L + GI F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K RI+
Sbjct: 220 KLKTKGIHTAFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPETAEIINKAKQERRRII 279
Query: 267 SVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSA 326
+VGTT+LR +E+ +GII S T+IFITPG++F+ D+L++NFH PKSTL ML+ A
Sbjct: 280 AVGTTTLRTVESFC-NNGIIKAGSFETDIFITPGFKFQTADMLLTNFHFPKSTLFMLICA 338
Query: 327 FCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F G +E ++Y++AI RF+SYGD +LL++K
Sbjct: 339 FAGFKEMHELYKYAIKEKMRFFSYGDATLLYRK 371
>gi|123967993|ref|YP_001008851.1| queuosine biosynthesis protein [Prochlorococcus marinus str.
AS9601]
gi|229619923|sp|A2BPN3|QUEA_PROMS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123198103|gb|ABM69744.1| Queuosine biosynthesis protein [Prochlorococcus marinus str.
AS9601]
Length = 374
Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 120/361 (33%), Positives = 183/361 (50%), Gaps = 10/361 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R ++RLM+V + +++ ++L D +V
Sbjct: 13 KLEAYDYLLDPSLIASKPSAIRHASRLMIVRNSFLEEDCLTNKFTNNLLDEFREGDLVVV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L +K + + R W A+P+K +K L S
Sbjct: 73 NNTKVMKARLK-----VELENKKLVELLVLERSHECVWLCLAKPAKKLKINRKLKLKSPL 127
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQIS---LVGTIPLPPYIARKRPIDARDYV 178
Q TG + F + L G IPLPPYI D+
Sbjct: 128 EQEINLIVDGVDEETGGRFIKFPENITCLNSMNELLDKYGEIPLPPYIKNSEE-DSFHEK 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLSNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+H E ++ + +K +I+++GTTS+R LE+ + + P + + N+ I
Sbjct: 247 KLHKEWVSVNKEVVNEIKRIKKTDRKIIAIGTTSVRALESCYSHEINDFIPIAKYVNLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ VD L++NFHLPKS+LL+LVSA G E ++Y+ AI +RF+SYGD +
Sbjct: 307 KPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLELYKKAIKEKFRFFSYGDAMYIS 366
Query: 358 Q 358
Sbjct: 367 P 367
>gi|260909536|ref|ZP_05916239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
gi|260636384|gb|EEX54371.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
Length = 388
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 124/394 (31%), Positives = 184/394 (46%), Gaps = 43/394 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F+F LP IAL P + RD RLMV+H + +
Sbjct: 1 MKLSQFNFKLPQELIALYPHSVYHEIENEKGEKEMSRLTRRDECRLMVLHKKSNTIDLFK 60
Query: 43 DH-----------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ + + D +FN+TKV A+L G++ + + +I L
Sbjct: 61 KDKKGKPIKGEFIQFRDIIDYFDEGDTFIFNDTKVFPARLYGMK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DDSGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPI---DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R + +G PLP YI R D D+QT YA +G+V AP GLHF+ L
Sbjct: 174 DEFKRSLFALGESPLPRYIIDARENHHGTEEDMEDFQTIYAANEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
L R+ GI +TLH G G F ++VED H + SE I + +N KS G
Sbjct: 234 LKRMEIRGINSAAITLHCGLGNFHDIEVEDLTKHKVDSESMHIGSEACAIVNKAKSEGKH 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
I +VGT+ ++ ETA DG++ +SG+TN FI P Y F D +++NF+ P STLLM
Sbjct: 294 ICAVGTSVVKATETAVGTDGMLKEYSGWTNRFIFPPYDFGLADTMVANFYHPLSTLLMST 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+AF G + + Y+ A+ + Y+F +GD L+
Sbjct: 354 AAFGGYDLVMEAYRLAVENEYKFGCFGDALLILN 387
>gi|313887406|ref|ZP_07821096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
gi|312923174|gb|EFR33993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
gi|332177882|gb|AEE13572.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Porphyromonas asaccharolytica DSM 20707]
Length = 357
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 111/360 (30%), Positives = 172/360 (47%), Gaps = 13/360 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ FD+ LP IA P RD +R+MV+H I D+ + D VF
Sbjct: 6 KLSHFDYKLPEELIAQYPTTFRDQSRMMVLHRTDGS---IEHKNFVDIIDYFGEKDTFVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFS 119
N+TKV A+L G++ + + +I L ++ W V P++ I+ G+ L F
Sbjct: 63 NDTKVFPARLYGLK----EKNQAKIEVFLLRELNESLRLWDVLVDPARKIRIGNKLEFGE 118
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDY 177
+ G L A VID + +L F G + + + +G PLP KRP + D
Sbjct: 119 EGGAPVLVAEVIDNTISRGRILRFLYDGSHEDFLKDLYSLGEAPLPE--EIKRPAEPSDL 176
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +AK G+V AP A LHF+ +L +L G + F+TLH ++ ++VE
Sbjct: 177 ERYQSVFAKHIGAVCAPAASLHFSDIILHKLRLQGCNLAFLTLHHNLSSYQEIEVEAISK 236
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+ + +E +I A +N + +IV+VG T +R LET + DG + +SG+TN FI
Sbjct: 237 YKVENEEMYISAECCDIVNQARDDKAQIVAVGATVMRALETGVSTDGYLKEFSGWTNEFI 296
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y +++NF+ PKS LM + G + A+ YRF YGD L+
Sbjct: 297 YPPYHIHLPTAMLTNFNAPKSINLMCAATMGGEKNVMNAMNVAVKEKYRFGCYGDALLIM 356
>gi|126695763|ref|YP_001090649.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9301]
gi|229892795|sp|A3PBC3|QUEA_PROM0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126542806|gb|ABO17048.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9301]
Length = 374
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 116/361 (32%), Positives = 179/361 (49%), Gaps = 10/361 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R +RLM+V + +++ +L D ++
Sbjct: 13 KLEAYDYLLDPSLIASKPSAIRHESRLMIVRNSFLEEDCLTNKFTKNLLDEFREGDLVIV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L + + + R W A+P+K +K L S
Sbjct: 73 NNTKVMKARLK-----VELENKTLVELLVLERSHECIWLCLAKPAKKLKINRKLKLKSPL 127
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQIS---LVGTIPLPPYIARKRPIDARDYV 178
Q TG + F + L G IPLPPYI ++
Sbjct: 128 AQDINLIVDGVDEETGGRFIKFPENITCLNSMNELLDKYGEIPLPPYIKNSEE-ESFHEK 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLSNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+H E ++ + + +K +I+++GTTS+R LE+ + + P + + ++ I
Sbjct: 247 KLHKEWVSVNKEVVEEIKRIKKTDRKIIAIGTTSVRALESCYSHEINDFIPIAKYVDLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 307 KPGYEFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYGDAMYIS 366
Query: 358 Q 358
Sbjct: 367 P 367
>gi|288799662|ref|ZP_06405121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
gi|288332910|gb|EFC71389.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
Length = 388
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 119/394 (30%), Positives = 184/394 (46%), Gaps = 43/394 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP-VFPR-----------------DSARLMVVHPNLSCPLVIS 42
M + +F F LP ++AL P F R D +RLMV+H +
Sbjct: 1 MKLSQFKFKLPAEQVALYPHCFEREYTDKDGKKETFKITRQDESRLMVLHKKSGTIDLFQ 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDENGNPIEGKYIEFRNIVEYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGSMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPIDARDYVD---YQTTYAKIQGSVAAPTAGLHFTSNL 204
E ++++ +G PLP YI R D +Q +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKKELYALGESPLPRYIIDNREETHATQEDLENFQCIFAKNEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
L R+ GI ++TLH G G F ++VED H M SE ++A + +N K G +
Sbjct: 234 LKRMEIKGINNAYITLHCGLGCFNDIEVEDLTKHKMDSEQMVVNAEACKIVNDTKRNGKK 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ +VGT+ ++ ETA DG++ + G+TN FI P Y F + +++NF+ P STLLM
Sbjct: 294 VCAVGTSVVKATETAVGTDGMLKEFEGWTNKFIFPPYDFGLSNTMVTNFYHPYSTLLMET 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+AF G E + Y A+ H Y F +GD+ L+
Sbjct: 354 AAFGGYELVMEAYDLAVKHGYMFGCFGDSLLILN 387
>gi|33860963|ref|NP_892524.1| queuosine biosynthesis protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|46576939|sp|Q7V2R3|QUEA_PROMP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33639695|emb|CAE18865.1| Queuosine biosynthesis protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 374
Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats.
Identities = 119/361 (32%), Positives = 184/361 (50%), Gaps = 10/361 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L + IA +P R +RLM+V + ++ +L L D +V
Sbjct: 13 KLEAYDYILDETLIANKPSKVRHESRLMIVRDSSLEEDFTTNKYTKNLLDELRKGDLVVV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+L K + + + ++W ARP+K +K L+ S
Sbjct: 73 NDTKVMKARLK-----VELENGKLVELLVLEKADQSTWLCLARPAKKLKINSQLNLKSSL 127
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQI---SLVGTIPLPPYIARKRPIDARDYV 178
+ TG + F + +L + G PLPPYI ++
Sbjct: 128 AKDIKLHISGTDKETGGRFIKFPENINDLISMNNLLDIYGETPLPPYIKSAEE-ESFHEN 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L GI V +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYASNPGAVAAPTAGLHLSKSLISNLKKKGILVMPITLHVGYGTFKPIDQEDLSNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
+H E + + + + VK R++++GTTS+R LE+ + E G + P + ++ I
Sbjct: 247 KLHKEWVRVSSEVVEEIKRVKKTDRRVIAIGTTSVRALESCYSYEMGDLIPIDKYVDLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 307 KPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLNLYKKAIREKFRFFSYGDAMYIS 366
Query: 358 Q 358
Sbjct: 367 P 367
>gi|301166843|emb|CBW26420.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteriovorax marinus SJ]
Length = 348
Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats.
Identities = 124/362 (34%), Positives = 185/362 (51%), Gaps = 25/362 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +DFDLP +A RP+ R +++L+V I +L +L + +V N
Sbjct: 8 LSNYDFDLPKELVASRPIAGRHNSKLLVYKVKSG---EIIHEHFYNLANYLPEDSLLVLN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLH--MRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
+KV +L G + + L S + + S GD F +
Sbjct: 65 QSKVFPCRLIGKK-----PTGGKCEVFLLESYPNSNGEYKSLIKTSSKKSVGDEFFFEDE 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I++ + G + F+ L ++ IP+PPYI D D DY
Sbjct: 120 ------LVAKIERIDEGNFYISFNR--ENLAEYLNEYAKIPIPPYIRNGES-DELDKSDY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GSVAAPTAGLHFT ++ L I+ +VTLHVG GTF PVK ++ DH M
Sbjct: 171 QTVFAKNIGSVAAPTAGLHFTEDVFKSLQEKNIERAYVTLHVGLGTFAPVKTDNLQDHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS--GFTNIFIT 298
HSE FID + + I +VGTTSLR+LE++ + + T+IF+
Sbjct: 231 HSENYFIDTENKEKI----LSKKEIFAVGTTSLRVLESSHNGENFDIEANEIKETDIFLH 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG +++ L++NFHLPKSTLLMLVS+ G E+T ++Y+ AI++ YRF+SYGD+ L+ +
Sbjct: 287 PGVDVHSINGLITNFHLPKSTLLMLVSSLIGREKTLELYKEAIANEYRFFSYGDSMLILR 346
Query: 359 KR 360
+
Sbjct: 347 DQ 348
>gi|323344442|ref|ZP_08084667.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
gi|323094569|gb|EFZ37145.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
Length = 388
Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats.
Identities = 124/393 (31%), Positives = 190/393 (48%), Gaps = 43/393 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F LP ++AL P V RD +RLMV+H +
Sbjct: 1 MKLSQFKFKLPEEQVALYPHSFERKFKNEDGTKETFRVTRRDESRLMVLHKKTQAIEMFK 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDKKGKPIEGDYLDFRNILDYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
++ W V P++ I+ G+ L F D S + A VID + L F
Sbjct: 117 RELNEEMRLWDVLVEPARKIRIGNKLFF---DDTSTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPIDARDYVD---YQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP YI R D +Q +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKRELFALGEAPLPRYIIDNRENHHAVKEDLENFQCIFAKHEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI F+TLH G G F ++VED H M SE IDA + +N+ K G R
Sbjct: 234 MKRMEIRGINFAFITLHCGLGNFHEIEVEDLTKHKMDSEQMIIDAEACEVVNATKKGGHR 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
I +VGT+ ++ ETA DG++ +SG+TN FI P Y F + +++NF+ P STLLM
Sbjct: 294 ICAVGTSVVKATETAVGTDGMLKEFSGWTNKFIFPPYDFGLANTMIANFYHPLSTLLMQT 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+AF G + + Y+ A+ + Y+F +GD+ L+
Sbjct: 354 AAFGGYDLVMQAYEMAVENGYKFGCFGDSLLIL 386
>gi|282880083|ref|ZP_06288803.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
gi|281305956|gb|EFA97996.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
Length = 388
Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats.
Identities = 121/394 (30%), Positives = 184/394 (46%), Gaps = 43/394 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+LP IAL P + RD +RLMV+H +
Sbjct: 1 MKLSQFKFNLPEELIALYPHSVYHEIKNAHGKKEISRMTRRDESRLMVLHRKSQTIDMFQ 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDKKGKDIKGQYLEFRHVLDYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKR---PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E + ++ +G PLP YI +R DA D DYQT +AK +G+V AP+ GLHF+ +
Sbjct: 174 DEFKHELFALGETPLPRYIINRREVPHADAHDQEDYQTIFAKHEGAVRAPSTGLHFSREM 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
L R+ GI ++TLH F ++VED H M SE IDA + +N K G
Sbjct: 234 LKRMEIKGIHDTYITLHCSLSAFNSIEVEDLTKHKMDSEQMKIDAKVCEIVNRTKQEGHH 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ +VGT+ ++ ETA DG++ + G+T+ FI P Y F D +++NF+ S LLM
Sbjct: 294 VCAVGTSVVKATETAVGTDGLLKEYDGWTSKFIFPPYDFGLADTMIANFYHSMSPLLMET 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+AF G E + Y A+ + Y+F YGD+ L+
Sbjct: 354 AAFGGYELVMEAYDLAVKNGYKFGCYGDSMLILN 387
>gi|228470898|ref|ZP_04055743.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
gi|228307295|gb|EEK16309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
Length = 357
Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats.
Identities = 110/360 (30%), Positives = 171/360 (47%), Gaps = 13/360 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ FD+ LP IA P RD +R+MV+H I D+ + D VF
Sbjct: 6 KLSHFDYKLPEELIAQYPTTFRDQSRMMVLHRTDGS---IEHKNFVDILDYFGEKDTFVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFS 119
N+TKV A+L G++ + + +I L ++ W V P++ I+ G+ L F
Sbjct: 63 NDTKVFPARLYGLK----EKNQAKIEVFLLRELNESLRLWDVLVDPARKIRIGNKLEFGE 118
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDY 177
+ G L A VID + +L F G + + + +G PLP KRP + D
Sbjct: 119 EGGAPVLVAEVIDNTISRGRILRFLYDGSHEDFLKDLYSLGEAPLPQ--EIKRPAEPSDL 176
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +AK G+V AP A LHF+ +L +L G + F+TLH ++ ++VE
Sbjct: 177 ERYQSVFAKHIGAVCAPAASLHFSDIILHKLRLQGCNLAFLTLHHNLSSYQEIEVEAISK 236
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+ + +E +I +N + +IV+VG T +R LET + DG + +SG+TN FI
Sbjct: 237 YKVENEEMYIPLECCDIVNQARDDNAQIVAVGATVMRALETGVSTDGYLKEFSGWTNEFI 296
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y +++NF+ PKS LM + G + A+ YRF YGD L+
Sbjct: 297 YPPYHIHLPTAMLTNFNAPKSINLMCAATMGGEKNVMNAMNVAVKEKYRFGCYGDALLIM 356
>gi|329850831|ref|ZP_08265676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Asticcacaulis biprosthecum C19]
gi|328841146|gb|EGF90717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Asticcacaulis biprosthecum C19]
Length = 356
Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats.
Identities = 165/342 (48%), Positives = 216/342 (63%), Gaps = 9/342 (2%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IALRP PR+SARL+ + ++D V D+ AFL S D +V N+TKV+ AQL+G+
Sbjct: 15 IALRPAEPRESARLLRIDAQGG----LTDARVGDIAAFLKSGDLLVVNDTKVLPAQLHGI 70
Query: 75 RFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKW 134
R I TL W + +P + ++ GD LHF S +L+ATV K
Sbjct: 71 RRRDGADV--AIEATLIKATGATQWQAFLKPGRKVRIGDDLHFGSDI---KLQATVAAKA 125
Query: 135 NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAP 194
G L F + L ++ ++G +PLPPYI KR D +D DYQT +A +GSVAAP
Sbjct: 126 EDGRYTLDFHHTPEVLVERLHVIGAMPLPPYIRSKRREDDQDKRDYQTVFANEEGSVAAP 185
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
TAGLHFTS LL L S G+ + +TLHVGAGTF+P+KVEDT DHIMH+E+G I A +A
Sbjct: 186 TAGLHFTSQLLEVLQSQGVGIERITLHVGAGTFLPMKVEDTRDHIMHAELGVISAESAAR 245
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFH 314
+N+ + GGRIV VGTTSLRLLE+A G I+ ++ T IFITPG R+ D++++NFH
Sbjct: 246 INAARIAGGRIVCVGTTSLRLLESACDPQGTIHAFASETAIFITPGVVVRSCDLVLTNFH 305
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
LPKSTL MLVSA G + K Y+HAI YRF+SYGD L+
Sbjct: 306 LPKSTLFMLVSALAGTDTMKAAYRHAIETGYRFFSYGDACLI 347
>gi|302342503|ref|YP_003807032.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfarculus baarsii DSM 2075]
gi|301639116|gb|ADK84438.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfarculus baarsii DSM 2075]
Length = 365
Score = 328 bits (842), Expect = 7e-88, Method: Composition-based stats.
Identities = 123/357 (34%), Positives = 177/357 (49%), Gaps = 12/357 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+DLPP +A +P R ARLM + + V+ L L D +V N
Sbjct: 17 LADYDYDLPPELVAQKPAPRRVQARLMALGRDGGPA---RHLRVAHLCKLLRPGDILVLN 73
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRV---SPNSWSVYARPSKVIKKGDILHFFS 119
+TKV+ A+L + ++ L + R + ++ G L
Sbjct: 74 DTKVVPARLLVGKESGGRAEVFLLNPALPLERLVDGRERHQALVRAHRPVRPGQRLSLAG 133
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG +++ G+ ++ + L G PLPPYI R D
Sbjct: 134 ADGPWIFV---LERGQRGQAVVELPSGALGLA---QRFGQAPLPPYIRRPNGPSDDDVRR 187
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA G+VAAPTAGLH + LL+ L G+ + +TLHVG GTF ED
Sbjct: 188 YQTVYAAKAGAVAAPTAGLHLSHELLAALQRRGVNIARLTLHVGYGTFAEPAPEDLARGR 247
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
+H+E ID QA+ + ++ GGR+++VGTTS+R LE G P G+ +I I P
Sbjct: 248 LHAEWVEIDEAACQAVATARAAGGRVIAVGTTSMRALEWLAGPGGAPRPRRGWCDILIQP 307
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+RFRA D L++NFHLP++TLLMLV+A G E Y A+ YRFYS+GD L+
Sbjct: 308 GHRFRAADGLLTNFHLPRTTLLMLVAALIGRERVLAAYAEAVRQRYRFYSFGDGMLI 364
>gi|187250918|ref|YP_001875400.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Elusimicrobium minutum Pei191]
gi|186971078|gb|ACC98063.1| S-Adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Elusimicrobium minutum Pei191]
Length = 341
Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats.
Identities = 130/350 (37%), Positives = 189/350 (54%), Gaps = 27/350 (7%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IA P PRDSA+LMV++ + I + D+ + D +V N+TKV A+L
Sbjct: 12 IARTPATPRDSAKLMVLNRDGQ---KIEHRIFRDISQYFTPGDCLVINDTKVFPAKLFAK 68
Query: 75 RFCHINRREKEISCTLHMRVS-PNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDK 133
+ ++ L + PN W+ R K+G L F L+A + +
Sbjct: 69 K-----PTGGKVEVLLVRPLEKPNEWTALMRDY---KEGIELSFSED-----LKAVMDFR 115
Query: 134 WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID------ARDYVDYQTTYAKI 187
GE++L F+ ++ G +PLP YI + R D D YQT YA+
Sbjct: 116 NENGEVILKFN--NDDVLGYACENGLMPLPQYIEKARKHDGLSASIETDKERYQTVYAQF 173
Query: 188 QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFI 247
QGS+AAPTAG HFT LL ++ G+K+ VTLH+G GTF P+K D +H M +E G +
Sbjct: 174 QGSIAAPTAGFHFTPELLKKIEDKGVKIARVTLHIGWGTFKPLKT-DPKEHKMLAEYGTV 232
Query: 248 DAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVD 307
++ +N ++ GGRI SVGTTS R LE+ TE+GI +T++FI PGY+F+A+D
Sbjct: 233 SEEASKKINEARASGGRIFSVGTTSTRTLESF-TENGITKSGGRWTDLFIYPGYKFKAID 291
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L++NFH P ST L + SAF + K Y A+ + YRFYS+GD+ L+
Sbjct: 292 CLITNFHFPDSTPLCMASAFASEDFIFKAYNEAVENNYRFYSFGDSMLIL 341
>gi|307702043|ref|ZP_07639050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis NCTC 12261]
gi|307616530|gb|EFN95720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis NCTC 12261]
Length = 294
Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats.
Identities = 132/306 (43%), Positives = 178/306 (58%), Gaps = 14/306 (4%)
Query: 53 LNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
L DA+V N+T+V+ A+L G + + L + + W V A+P+K +K G
Sbjct: 2 LEPGDALVMNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVG 57
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ F G RL A V ++ G ++ F GI + +G +PLPPYI K
Sbjct: 58 TRVSF----GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD 112
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
YQT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V
Sbjct: 113 ----RERYQTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSV 168
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSG 291
++ D+H MHSE + A L SVK GR+++VGTTS+R LET ++ DG I SG
Sbjct: 169 DNLDEHEMHSEFYQLSEEAAATLRSVKENSGRVIAVGTTSIRTLETIGSKFDGQIQADSG 228
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+TNIFI PGY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+G
Sbjct: 229 WTNIFIKPGYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFG 288
Query: 352 DTSLLF 357
D ++
Sbjct: 289 DAMFIY 294
>gi|303232835|ref|ZP_07319519.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae PB189-T1-4]
gi|302481025|gb|EFL44101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae PB189-T1-4]
Length = 387
Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats.
Identities = 123/394 (31%), Positives = 193/394 (48%), Gaps = 44/394 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA PV PRDS +L+V+H + I D+ + + D IV
Sbjct: 1 MRTDDFDYELPEDHIAQAPVTPRDSCKLLVLHRDTG---EIEHKHFFDIIDYFDEGDLIV 57
Query: 61 FNNTKVITAQLNGVR-FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N T+V+ A+L G + I + + + W P + +K G L +
Sbjct: 58 ANKTRVLPARLIGKKKPSGITCETLLLRRREDLDPMGSIWECLVNPGRRMKPGVCLEYRE 117
Query: 120 QDGQS------RLEATVID--KWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKR 170
+ L A ++D + N G L+ F+ + G+ L+ I G +PLPPYI R
Sbjct: 118 GGLHAPDSAPVVLTARMLDFIEENRGGRLVKFTPAAGLSLDSAIHKAGHVPLPPYITRY- 176
Query: 171 PIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D YQT Y+ + S A+PTAGLHFT+ L+ R+ G++ V L VG TF
Sbjct: 177 ---EGDPEKYQTVYSMHEEHSAASPTAGLHFTNELIERIKQKGVQWKTVELEVGIDTFRL 233
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE------- 282
V+ +D H MH+E + A+++ K+ G R++++GTTS+R LE+A
Sbjct: 234 VEEDDPTQHEMHTERYHVPQDVVDAVHATKAAGKRVIAIGTTSVRSLESAFDTTCACATP 293
Query: 283 -----------DGIINPWSGF--------TNIFITPGYRFRAVDILMSNFHLPKSTLLML 323
D G T+++I PGY + VD +++NFH+P+STL+M+
Sbjct: 294 PVCAQRFESCPDAAAVCGHGDIVACANATTSLYIMPGYTWHVVDCMVTNFHVPRSTLMMM 353
Query: 324 VSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
VS+F ++ Y +AI H YRF S+GD ++
Sbjct: 354 VSSFASRDQIMDAYANAIEHNYRFLSFGDAMIML 387
>gi|219681507|ref|YP_002467892.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. 5A (Acyrthosiphon pisum)]
gi|257471188|ref|ZP_05635187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. LSR1 (Acyrthosiphon pisum)]
gi|254764269|sp|B8D8T3|QUEA_BUCA5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219624350|gb|ACL30505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. 5A (Acyrthosiphon pisum)]
Length = 357
Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 132/362 (36%), Positives = 198/362 (54%), Gaps = 16/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP S I+ P F R + RLMV++ + +I ++ +NS D I+
Sbjct: 1 MQLSDFSFDLPKSLISFHPYFIRSTCRLMVMYGHTG---MIFHKRFFNIIDEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+ G + ++ + + N+ + SK I G + F +
Sbjct: 58 LNNTQVIPARFFGKKES-----GGKVEVLVEKILGINNILASIKNSKNINIGSKIFFGYK 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +++ +V+D N+ + F + I+ +G IPLPPYI R R D Y
Sbjct: 113 D---KIKGSVVDCKNSFFEIF-FHDNIDSAIDIINNIGEIPLPPYIKRFRNKLDVDL--Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS+AAPTAGLHF LL L + G+ + ++TLH+G+GTF P++ ++HIM
Sbjct: 167 QTVYKKKTGSIAAPTAGLHFDLPLLEALHNKGVDIDYITLHIGSGTFQPIRRVQIEEHIM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPWSGFTNIFIT 298
HSE + + Q + S K +GGRI++VGT++LR LE+A + TNIFI
Sbjct: 227 HSESVEVSSSVIQKIKSCKKKGGRIIAVGTSTLRALESAYRSSKWSDSKDFISDTNIFIY 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + Y F+SYGD +
Sbjct: 287 PGYKHNIVDALITNFHFPESTLIMLVCSFLGYKNTMNAYNTAIVNKYSFFSYGDAMYITH 346
Query: 359 KR 360
+
Sbjct: 347 NK 348
>gi|194477169|ref|YP_002049348.1| Queuosine biosynthesis protein [Paulinella chromatophora]
gi|171192176|gb|ACB43138.1| Queuosine biosynthesis protein [Paulinella chromatophora]
Length = 373
Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 124/362 (34%), Positives = 192/362 (53%), Gaps = 15/362 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + F LP IA P PR +AR+++V V DL L +ND ++
Sbjct: 9 QLSSYSFQLPKEHIAQIPAEPRHNARMLMVPLLGQKSN---HGRVWDLINQLQTNDLLIV 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A + + + L + +W A+PSK+ + G ++ +
Sbjct: 66 NNTKVLRA-----KLIVKSESGPKGELLLLESLGRGTWLCLAKPSKIFQPGKQVNIEALG 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQI---SLVGTIPLPPYIARKRPIDARDYV 178
+ +TG L++F + G IP+PPYI ++ ID
Sbjct: 121 KPPLAIKILDIDKSTGGRLVLFPTHFDNFNSIAPLLEIYGNIPMPPYITKQNCIDD---E 177
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLHF+ +LS L I + VTLH+G GTF P++ E+ ++
Sbjct: 178 RYQTRYADKVGAVAAPTAGLHFSDEMLSALYKKNIHIAKVTLHIGLGTFRPIRQENLEEL 237
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
+H+E I T A+ S +++GGR++++GTT++R LE ++ +G + P+ G NI I
Sbjct: 238 KLHTEWVEISRETVNAVKSCQTKGGRVIAIGTTTVRALEGSSQLNNGELKPFIGPVNIVI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ VD L +NFH P S+LL +VSAF G + ++YQ AI YRF+SYGD+ +
Sbjct: 298 KPGYQFKVVDALFTNFHFPDSSLLFMVSAFIGRVQLLQLYQEAIGLGYRFFSYGDSMWIS 357
Query: 358 QK 359
+
Sbjct: 358 PQ 359
>gi|91070343|gb|ABE11260.1| queuosine biosynthesis protein [uncultured Prochlorococcus marinus
clone HF10-88F10]
Length = 374
Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats.
Identities = 116/361 (32%), Positives = 179/361 (49%), Gaps = 10/361 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R +RLM+V + +++ +L D ++
Sbjct: 13 KLEAYDYLLDPSLIASKPSAIRHESRLMIVRNSFLEEDCLTNKFTKNLLDEFREGDLVIV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L + + + R W A+P+K +K L S
Sbjct: 73 NNTKVMKARLK-----VELENKTLVELLVLERSHECVWLCLAKPAKKLKINRKLKLKSPL 127
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQIS---LVGTIPLPPYIARKRPIDARDYV 178
Q TG + F + L G IPLPPYI ++
Sbjct: 128 AQDINLIVDGVDEETGGRFIKFPENITCLNSMNELLDKYGEIPLPPYIKNSEE-ESFHEK 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+ L G+ + +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYATNPGAVAAPTAGLHLSKSLIFNLKKKGVIILPITLHVGYGTFKPIDQEDLSNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
+H E ++ + + +K +I+++GTTS+R LE+ + E P + + ++ I
Sbjct: 247 KLHKEWVSVNKEVVEEIKRIKKTDRKIIAIGTTSVRALESCYSYEIDDFIPIAKYVDLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 307 KPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLNLYKKAIKEKFRFFSYGDAMYIS 366
Query: 358 Q 358
Sbjct: 367 P 367
>gi|224373166|ref|YP_002607538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nautilia
profundicola AmH]
gi|223589238|gb|ACM92974.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nautilia
profundicola AmH]
Length = 336
Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats.
Identities = 130/366 (35%), Positives = 189/366 (51%), Gaps = 42/366 (11%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V +D++LP + IA PV PRDSA+L+V I+ + ++ F+ +FN
Sbjct: 2 VSSYDYNLPENLIARYPVTPRDSAKLLVYDRKT---DRITHTVFRNILDFVGE-SHFIFN 57
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKVI A++ G + ++ L+ +K G L F
Sbjct: 58 NTKVIKARIFGTKE-----TGGKVELLLNRPYRDGY---LVYIRGKVKPGSRLFF----- 104
Query: 123 QSRLEATVIDKWNTGEILLVF-----------SISGIELERQISLVGTIPLPPYIARKRP 171
L A V++ + G ++ F I ++L + + +G +PLPPYI R
Sbjct: 105 DKGLMAEVVELLDDGSRVVKFKVKSEKCKTEKEIDFLQLVKILEEIGHVPLPPYIK--RE 162
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D +YQT +AK +G+VAAPTA LHFT LL+++ ++TLHVGAGTF PV
Sbjct: 163 DEKIDEKEYQTVFAKKEGAVAAPTASLHFTDELLNKIDKKS----YLTLHVGAGTFKPVD 218
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
VED +H MHSE I TA+ L IV+VGTT R +E SG
Sbjct: 219 VEDIREHKMHSEFFEIPEDTARVL----DGSEEIVAVGTTVTRTVEYYARTGK----LSG 270
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
++F+ P V+ L++NFHLPKSTL+MLV+AF G ++T ++Y+ AI + YRFYSYG
Sbjct: 271 ECDLFLNPLNPPIRVNHLLTNFHLPKSTLIMLVAAFIGRKKTLELYEEAIKNEYRFYSYG 330
Query: 352 DTSLLF 357
D L+
Sbjct: 331 DAMLII 336
>gi|219682063|ref|YP_002468447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|254764270|sp|B8D737|QUEA_BUCAT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219621796|gb|ACL29952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|311085876|gb|ADP65958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. LL01 (Acyrthosiphon pisum)]
gi|311086446|gb|ADP66527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. TLW03 (Acyrthosiphon pisum)]
Length = 357
Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats.
Identities = 132/362 (36%), Positives = 198/362 (54%), Gaps = 16/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP S I+ P F R + RLMV++ + +I ++ +NS D I+
Sbjct: 1 MQLSDFSFDLPKSLISFHPYFIRSTCRLMVMYGHTG---MIFHKRFFNIIDEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+ G + ++ + + N+ + SK I G + F +
Sbjct: 58 LNNTQVIPARFFGKKES-----GGKVEVLVEKILGINNILASIKNSKNINIGSKIFFGYK 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +++ +V+D N+ + F + I+ +G IPLPPYI R R D Y
Sbjct: 113 D---KIKGSVVDCKNSFFEIF-FHDNIDSAIDIINNIGEIPLPPYIKRFRNKLDVDL--Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS+AAPTAGLHF LL L + G+ + ++TLH+G+GTF P++ ++HIM
Sbjct: 167 QTVYKKKTGSIAAPTAGLHFDLPLLEALHNKGVDIDYITLHIGSGTFQPIRRVQIEEHIM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPWSGFTNIFIT 298
HSE + + Q + S K +GGRI++VGT++LR LE+A + TNIFI
Sbjct: 227 HSESVEVSSSVIQKIKSCKKKGGRIIAVGTSTLRALESAYHSSEWSDSKDFISDTNIFIY 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + Y F+SYGD +
Sbjct: 287 PGYKHNIVDALITNFHFPESTLIMLVCSFLGYKNTMNAYNTAIVNKYSFFSYGDAMYITH 346
Query: 359 KR 360
+
Sbjct: 347 NK 348
>gi|15616752|ref|NP_239964.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. APS (Acyrthosiphon pisum)]
gi|11134530|sp|P57232|QUEA_BUCAI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|25318227|pir||B84945 hypothetical protein queA [imported] - Buchnera sp. (strain APS)
gi|10038815|dbj|BAB12850.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. APS (Acyrthosiphon pisum)]
Length = 357
Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats.
Identities = 132/362 (36%), Positives = 198/362 (54%), Gaps = 16/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP S I+ P F R + RLMV++ + +I ++ +NS D I+
Sbjct: 1 MQLSDFSFDLPKSLISFHPYFIRSTCRLMVMYGHTG---MIFHKRFFNIIDEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+ G + ++ + + N+ + SK I G + F +
Sbjct: 58 LNNTQVIPARFFGKKES-----GGKVEVLVEKILGINNILASIKNSKNINIGSKIFFGYK 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +++ +V+D N+ + F + I+ +G IPLPPYI R R D Y
Sbjct: 113 D---KIKGSVVDCKNSFFEIF-FHDNIDSAIDIINNIGEIPLPPYIKRFRNKLDVDL--Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS+AAPTAGLHF LL L + G+ + ++TLH+G+GTF P++ ++HIM
Sbjct: 167 QTVYKKKTGSIAAPTAGLHFDLPLLEALHNKGVDIDYITLHIGSGTFQPIRRVQIEEHIM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS--GFTNIFIT 298
HSE + + Q + S K +GGRI++VGT++LR LE+A + TNIFI
Sbjct: 227 HSESVEVSSSVIQKIKSCKKKGGRIIAVGTSTLRALESAYHSSEWSDSQDFISDTNIFIY 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + Y F+SYGD +
Sbjct: 287 PGYKHNIVDALITNFHFPESTLIMLVCSFLGYKNTMNAYNTAIVNKYSFFSYGDAMYITH 346
Query: 359 KR 360
+
Sbjct: 347 NK 348
>gi|114326953|ref|YP_744110.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulibacter bethesdensis CGDNIH1]
gi|114315127|gb|ABI61187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulibacter bethesdensis CGDNIH1]
Length = 361
Score = 325 bits (832), Expect = 8e-87, Method: Composition-based stats.
Identities = 154/365 (42%), Positives = 214/365 (58%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +F FDLPP RIA P PR+SARL+ V + + DH + DLP L D +V
Sbjct: 6 LDIADFTFDLPPERIAHEPARPRESARLLHVP---AGEEGVHDHHIRDLPDLLRPGDVLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL R + I TL+ + SW V AR ++ ++ GD L F
Sbjct: 63 ANDTRVIPAQLTAWR------GQARIGLTLNRPLPDGSWHVLARNARRLRAGDRLRFTEH 116
Query: 121 DGQ-------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
D Q L A V+ + G +L F + + ++ G + LPPYI R +
Sbjct: 117 DTQSTHTQPTGMLAAEVVARDEDGGAILRF--VAEDFDAALAQYGALALPPYIDRPQGPT 174
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A+D DYQT +A+ +G+VAAPTAGLHFT LL RL + GI+ +TLHVGAGTF+P++ +
Sbjct: 175 AQDAKDYQTVFARHRGAVAAPTAGLHFTPALLDRLAAKGIERVTITLHVGAGTFLPMRDD 234
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ H +H+E G I A +N+ K R+++VGTTSLRLLE+A G + P+ T
Sbjct: 235 TIEAHRLHAERGVITPEAASRINAAK----RVIAVGTTSLRLLESAADAAGGVRPFDAET 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG+RFR L++NFHLP+STL MLV AF G + Y +AI+ AYRFYSYGD
Sbjct: 291 DIFIKPGHRFRTAHALLTNFHLPRSTLFMLVCAFAGTARMRAAYAYAIAEAYRFYSYGDA 350
Query: 354 SLLFQ 358
L+ +
Sbjct: 351 CLIER 355
>gi|319651691|ref|ZP_08005818.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase [Bacillus
sp. 2_A_57_CT2]
gi|317396758|gb|EFV77469.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase [Bacillus
sp. 2_A_57_CT2]
Length = 286
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 125/298 (41%), Positives = 174/298 (58%), Gaps = 14/298 (4%)
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + I L ++ +SW +P+K +K+G + F
Sbjct: 2 LNDTKVLPARLFGEK----TGTGANIEVLLLKQLEGDSWETLVKPAKRVKEGTEITF--- 54
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A + G +L F GI + +G +PLPPYI + Y
Sbjct: 55 -GNGNLTAVCTGTSDHGGRVLEFKYDGI-FYEVLEELGEMPLPPYIKEQLDD----RDRY 108
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +GS AAPTAGLHFT LL + +G+ + F+TLHVG GTF PV V+D ++H M
Sbjct: 109 QTVFARERGSAAAPTAGLHFTEQLLEEIKEMGVHIAFITLHVGLGTFRPVSVDDLNEHEM 168
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN V+ +GGRI+SVGTTS R LET A+ +G SG+T+IFI P
Sbjct: 169 HAEFYQVTEGTARLLNEVREQGGRIISVGTTSTRTLETIASMHNGRFEEASGWTDIFIYP 228
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKSTL+MLVSA G E Y A+ YRF+S+GD L+
Sbjct: 229 GYEFKAIDGMITNFHLPKSTLIMLVSALAGRENVLNAYNQAVEEHYRFFSFGDAMLII 286
>gi|254527222|ref|ZP_05139274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9202]
gi|221538646|gb|EEE41099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9202]
Length = 374
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 118/361 (32%), Positives = 182/361 (50%), Gaps = 10/361 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R +RLM+V ++ +++ +L D +V
Sbjct: 13 KLEAYDYFLDPSLIASKPCAIRHESRLMIVRNSVLEENCLTNKFTKNLLDEFRKGDLLVV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L + + R W A+P+K +K + S
Sbjct: 73 NNTKVMKARLK-----VQLENRTLVELLVLERSHECVWLCLAKPAKKLKINRKIILKSPS 127
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQIS---LVGTIPLPPYIARKRPIDARDYV 178
Q TG + F + +L G IPLPPYI ++
Sbjct: 128 AQDINLMVDGVDEETGGRFIKFPENITDLNSMNDLLNKYGEIPLPPYIKNSEE-ESFHEN 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED D
Sbjct: 187 SYQTEYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLSDL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+H E ++ + + +K RI+++GTTS+R LE+ +++ P + + ++ I
Sbjct: 247 KLHKEWVSVNEEVVEEIKKIKKTDRRIIAIGTTSVRALESCYSKEINDFIPIAKYVDLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 307 KPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYGDAMYIS 366
Query: 358 Q 358
Sbjct: 367 P 367
>gi|303235950|ref|ZP_07322553.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
gi|302483823|gb|EFL46815.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
Length = 394
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 122/400 (30%), Positives = 185/400 (46%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+LP ++AL P V RD ARLMV+H + +
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSERVLNRADGTSQVFKVTRRDEARLMVLHKKSGTIDMYN 60
Query: 43 DH-----------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ + + D VFN+TKV A+L G + + + +I L
Sbjct: 61 KEVKGEPTEEDYIRFKDVVNYFDEGDTFVFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGSMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKR---------PIDARDYVDYQTTYAKIQGSVAAPTAGL 198
E ++++ +G PLP YI R DA D ++QT +AK +G+V AP L
Sbjct: 174 EEFKKELYALGEAPLPRYIIDNREKEAGEDFAHADAADLENFQTVFAKHEGAVTAPGTNL 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +L+ L GI F+TLH G G F ++VED H M SE I+A Q +N
Sbjct: 234 HFSEHLMKMLEIKGIHSAFITLHCGLGNFHNIEVEDLTKHKMDSEEMHINAEACQIVNDT 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K R+ ++G + ++ ETA DG++ + G+TN FI P Y F + ++ NF+ P S
Sbjct: 294 KLANHRVCAIGASVVKATETAVGTDGMLKEYDGWTNKFIFPPYDFGLANSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ Y+F +GD L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKGGYQFGCFGDALLILN 393
>gi|157412818|ref|YP_001483684.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9215]
gi|238686829|sp|A8G3B7|QUEA_PROM2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157387393|gb|ABV50098.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9215]
Length = 374
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 116/361 (32%), Positives = 181/361 (50%), Gaps = 10/361 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R +RLM+V ++ +++ +L D +V
Sbjct: 13 KLEAYDYFLDPSLIASKPCAIRHESRLMIVRNSVLEENCLTNKFTKNLLDEFRKGDLLVV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L + + R W A+P+K +K + S
Sbjct: 73 NNTKVMKARLK-----VQLENRTLVELLVLERSHECVWLCLAKPAKKLKINRKIILKSPY 127
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQIS---LVGTIPLPPYIARKRPIDARDYV 178
Q TG + F + +L G IPLPPYI ++
Sbjct: 128 AQDINLMVDGVDEETGGRFIKFPENITDLNSMNDLLNKYGEIPLPPYIKNSEE-ESFHEK 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLSNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+H E ++ + + +K +I+++GTTS+R LE+ + + P + + ++ I
Sbjct: 247 KLHKEWVSVNEEVVEEIKRIKKTDRKIIAIGTTSVRALESCYSHEINDYVPIAKYVDLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 307 KPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYGDAMYIS 366
Query: 358 Q 358
Sbjct: 367 P 367
>gi|152992047|ref|YP_001357768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sulfurovum
sp. NBC37-1]
gi|151423908|dbj|BAF71411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sulfurovum
sp. NBC37-1]
Length = 350
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 128/362 (35%), Positives = 180/362 (49%), Gaps = 26/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ K +D++LP IA PV PRD A+L+V ++ L FL I
Sbjct: 10 LLTKNYDYELPEGFIATEPVHPRDEAKLLVYDRRNDT---VTHTTFRHLLDFLPQTCDIF 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A++ G + + ++ + + + + V R +K G L F
Sbjct: 67 LNDTRVIKARIFGHKLSTDGQGGGKVELLFNKPLDAHHYLVLIR--GKVKTGTQLLF--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG-----IELERQISLVGTIPLPPYIARKRPIDAR 175
L ATV G ++ F+ G EL + + +G IPLPPY+ R+ +
Sbjct: 122 --DDSLMATVTTLNKDGSRIVTFTRHGKEIRFEELVQILDEIGHIPLPPYMQREDKAED- 178
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
DYQT +AK G+VAAPTA LHFT L L VTLHVGAGTF PV+ E
Sbjct: 179 -EKDYQTLFAKNAGAVAAPTASLHFTPELFETLQQRHKTHK-VTLHVGAGTFKPVEAEKI 236
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MHSE I A+ L I+++GTT R +E G ++
Sbjct: 237 LDHPMHSEYFDIPPEAAKVL----DSDTEILAIGTTVTRTIEYYVRTGKT----EGECDL 288
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + V L++NFHLPKSTL+MLVSAF G E+T ++Y+ AI YRF+SYGD L
Sbjct: 289 FLNPHNPPQRVTHLLTNFHLPKSTLIMLVSAFIGREKTLQLYKEAIEKNYRFFSYGDAML 348
Query: 356 LF 357
+
Sbjct: 349 IL 350
>gi|297181292|gb|ADI17484.1| s-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured beta proteobacterium
HF0130_04F21]
Length = 364
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 126/361 (34%), Positives = 194/361 (53%), Gaps = 14/361 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++FD++LP + IA P R +RL+ V + L + DL + L +D ++F
Sbjct: 6 RLEDFDYELPDNLIAQYPAKTRSESRLLNVDLSDKKNLNFEELSFVDLASKLKKDDLLIF 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++VI A+LN V+ + + + + + +PSK I G L
Sbjct: 66 NNSRVIPAKLNCVKSTGGSVEILITNKLQTEKENIFLCNAMLKPSKKIFLGQKLKI---K 122
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G S + + + ++ + I+ + G +PLPPYI R + +DY DYQ
Sbjct: 123 GSSETLTIIENNLKSENNFVIEFKNPIDHILKN--FGIVPLPPYIK--RHPEKQDYTDYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
+A GS+A PTAGLHF + + +L G+K FVTLHVG GTF P++V D H MH
Sbjct: 179 NIFATTPGSIAVPTAGLHFDNLVFKKLAEKGVKYEFVTLHVGIGTFQPIRVVDISRHEMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-------PWSGFTN 294
SE + A+A+N RI++VGTTSLR+LE+ + + P S TN
Sbjct: 239 SEFCSVSNNCAKAINKATRENRRIIAVGTTSLRVLESLASIEIQEKSHIKSVSPRSWRTN 298
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ PG++F+ V L++NFHLPKSTLL+LVS F G E ++Y+ AI ++F+S+GD
Sbjct: 299 LFVKPGFKFQMVSGLITNFHLPKSTLLILVSTFLGHETCMRVYKEAIKKEFKFFSFGDAM 358
Query: 355 L 355
+
Sbjct: 359 M 359
>gi|307721623|ref|YP_003892763.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurimonas autotrophica DSM 16294]
gi|306979716|gb|ADN09751.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurimonas autotrophica DSM 16294]
Length = 342
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 129/362 (35%), Positives = 184/362 (50%), Gaps = 30/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +DF LP IA P PRD A+L+V I+ +L FL A++
Sbjct: 6 LLTSSYDFTLPDELIASYPASPRDHAKLLVYDRATDT---ITHTFFYNLEEFLPKECALI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + +I ++ ++ +VY R +K G + F
Sbjct: 63 FNDTKVIKARLFGQKPS-----GGKIELLINRALNACDVNVYIR--GKVKAGSEIFF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG-----IELERQISLVGTIPLPPYIARKRPIDAR 175
+ L+A V + G + F + +L I +G IPLPPYI R +
Sbjct: 113 --EDNLKAKVTKLNDDGSREVNFYQNDTLLRFEDLLPIIDKIGHIPLPPYIQ--RADEDE 168
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +YQ+ +A +G+VAAPTA LHFT R+ K +VTLHVG+GTF PV+ +
Sbjct: 169 DANEYQSVFACQEGAVAAPTASLHFTPAQHERIC-KNHKHAYVTLHVGSGTFKPVEADII 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I L IVSVGTTS R +E G N+
Sbjct: 228 TEHPMHSEYYDISPQAQAIL----DSNIPIVSVGTTSTRTIEFYARHKEQTK---GEANL 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + V+ L++NFHLPKSTLLMLV++F G+++T+++Y AI YRFYSYGD L
Sbjct: 281 FLHPNNKPLRVNHLLTNFHLPKSTLLMLVASFVGLQKTQELYAEAIKEKYRFYSYGDAML 340
Query: 356 LF 357
+
Sbjct: 341 IL 342
>gi|113954197|ref|YP_729837.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CC9311]
gi|123132691|sp|Q0ICI5|QUEA_SYNS3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113881548|gb|ABI46506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase(Queuosine
biosynthesis protein queA) [Synechococcus sp. CC9311]
Length = 369
Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats.
Identities = 136/362 (37%), Positives = 195/362 (53%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP RIA PV PR ARL+VV P + V D L D +V
Sbjct: 7 LQLSSYDYVLPEDRIAQAPVEPRHDARLLVVPPAERSLSELRHQRVWDWQQELQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R W ARP+K ++ GD L +
Sbjct: 67 VNDTRVLKARLRVRRSGGGLGELLV-----LEPRGEGRWLCLARPAKRMRPGDQLWLEAL 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDY 177
+ + A + + +G ++ F ++ LE + G +PLPPYI R D+ D
Sbjct: 122 EQEPLSLAVLANDAASGGRIVQFPPDCVDALSLEGLLERYGEVPLPPYITRH---DSSDQ 178
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + LL+ + G+ + VTLHVG GTF PV+ ED D
Sbjct: 179 ERYQTRYATRPGAVAAPTAGLHLSDALLAAIAERGVALAHVTLHVGLGTFRPVETEDLSD 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+HSE + A +A+ + ++RGGR+++VGTTS+R LE A G + P G ++ I
Sbjct: 239 LTLHSEWVEVRAEVVEAVLACRARGGRVIAVGTTSVRALEAAAAGGGGLQPLKGPVDLVI 298
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF+ V L++NFHLPKS+LL+LVSA G ++ ++Y AI YRFYSYGD +
Sbjct: 299 QPGYRFQVVQGLLTNFHLPKSSLLLLVSALIGRDQLLQIYNAAIEEMYRFYSYGDAMWIA 358
Query: 358 QK 359
+
Sbjct: 359 PE 360
>gi|282858550|ref|ZP_06267721.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
gi|282588675|gb|EFB93809.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
Length = 394
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 118/400 (29%), Positives = 189/400 (47%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSC----P 38
M + +F F+LP ++AL P V RD RLMVVH
Sbjct: 1 MKLSQFKFNLPEEQVALYPHSSERVLKRADGSEQKFTVVRRDEGRLMVVHRKSGKIDMFK 60
Query: 39 LVISDH-------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
I+D D+ + D +FN+TKV A+L G + + + +I L
Sbjct: 61 GDITDKPKEEDYIRFRDVLDYFGEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNAEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPIDARDY---------VDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + + ++Q+ +AK +G+V+AP +
Sbjct: 174 EEFKRELFALGEAPLPRYIIDNRPKEEGEEFAHATADDLENFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + G+K FVTLH G G+F ++VED H M SE I+A + +N
Sbjct: 234 HFSEHMMKMMEIKGLKSAFVTLHCGLGSFHDIEVEDLTKHKMDSEEMHINAEACEIVNKT 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G ++ +VG + ++ E++ DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KLGGHKLCAVGASVVKACESSVGTDGLLKEYDGWTNKFIFPPYNFGLADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
LLM +AF G + + Y A+ + Y F S+GD+ L+
Sbjct: 354 VLLMETAAFGGYDLIMEAYDLAVKNGYMFGSFGDSMLILN 393
>gi|256027761|ref|ZP_05441595.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D11]
gi|289765718|ref|ZP_06525096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D11]
gi|289717273|gb|EFD81285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D11]
Length = 313
Score = 322 bits (825), Expect = 7e-86, Method: Composition-based stats.
Identities = 120/329 (36%), Positives = 181/329 (55%), Gaps = 16/329 (4%)
Query: 29 MVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISC 88
M+++ I ++ +L D +V N TKVI A++ G + +
Sbjct: 1 MLINRKTGS---IEHKHFYNIVDYLQKGDVLVRNATKVIPARIFGHKD-----TGGVLEI 52
Query: 89 TLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI 148
L R++ ++W +P+K +K G L+ L A +++ G +L F G
Sbjct: 53 LLIKRITLDTWECLLKPAKKLKLGQKLYIGENK---ELIAELLEIKKDGNRILKFYHEG- 108
Query: 149 ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
E + +G++PLPPYI RK + YQT YA+ SVAAPTAGLHFT LL ++
Sbjct: 109 SFEEILDKLGSMPLPPYITRK----LENKDRYQTVYAQRGESVAAPTAGLHFTEELLKKI 164
Query: 209 ISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSV 268
+ G+++ + L VG GTF PV+ + +H MH E I A+ +N K+ G RI+SV
Sbjct: 165 LDKGVEIVDIFLEVGLGTFRPVQTVNVLEHKMHEESFEISEKAAKIINEAKTEGRRIISV 224
Query: 269 GTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC 328
GTT+ R LE++ E+G + T IFI PGY+F+ VD L++NFHLPKSTLLMLVSAF
Sbjct: 225 GTTATRALESSVDENGKLIGQEKDTGIFIYPGYKFKIVDALITNFHLPKSTLLMLVSAFY 284
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLLF 357
E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 285 DREKMLEIYNLAVKEKYHFFSFGDSMFIY 313
>gi|281422487|ref|ZP_06253486.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
gi|281403470|gb|EFB34150.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
Length = 394
Score = 321 bits (823), Expect = 9e-86, Method: Composition-based stats.
Identities = 118/400 (29%), Positives = 186/400 (46%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP-----------------VFPRDSARLMVVHPNLSCPLVISD 43
M + +F+F LP ++AL P + RD +RLMV+H +
Sbjct: 1 MKLSQFNFKLPKDQVALYPHKAKHVVKTASGERTFEITRRDESRLMVLHKKSETIEMYKK 60
Query: 44 H----------------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEIS 87
D+ + D +FNNTKV A+L G + + + +I
Sbjct: 61 DENGKDMVDADGNPVFLQFKDIVNYFEEGDTFIFNNTKVFPARLYGTK----EKTDAKIE 116
Query: 88 CTLHMRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSI 145
L ++P W V P++ I+ G+ L F D + + A VID + L F
Sbjct: 117 VFLLRELNPEMRLWDVLVEPARKIRIGNKLFF---DDVNEMVAEVIDNTTSRGRTLRFLY 173
Query: 146 ----SGIELERQISLVGTIPLPPYIARKR---PIDARDYVDYQTTYAKIQGSVAAPTAGL 198
+ +R + +G PLP Y+ R D D+Q +A+++G+V AP GL
Sbjct: 174 DEDGNHDVFKRSLFALGEAPLPRYVIDAREDHHATEDDMDDFQCVFAEVEGAVTAPATGL 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ L+ R+ GI ++TLH G G F ++VED H M SE I +N
Sbjct: 234 HFSRELMKRMEINGINEAYITLHCGLGNFHDIEVEDLTKHKMDSEQMMISQEACDLVNKT 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G R+ ++GT+ ++ ETA DG++ + G+TN FI P Y F D ++NF+ P+S
Sbjct: 294 KLAGHRVCAIGTSVMKATETAVGTDGMMKAFDGWTNKFIFPPYDFGLADCAVANFYHPES 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TL+M +AF G + + Y+ A+ + Y F YGD+ L+
Sbjct: 354 TLMMSTAAFGGYDLVYEAYKMAVKNGYMFGCYGDSLLMLP 393
>gi|298373549|ref|ZP_06983538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroidetes oral taxon 274 str. F0058]
gi|298274601|gb|EFI16153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroidetes oral taxon 274 str. F0058]
Length = 351
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 122/362 (33%), Positives = 182/362 (50%), Gaps = 16/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA RD +L+V+H + + D+ ++ + D V
Sbjct: 1 MKLSQFKFDLPEKSIAQYLPKNRDDCKLLVLHKKS---EKVEHKKLIDILSYFDDKDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNT+V A + G++ + E I L ++P W V P++ I+ G+ L+F
Sbjct: 58 FNNTQVFPALMTGIK----EKTEAVIEVFLLRELNPLTKLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
L A VID + L F G E ++ + +G LP YI RP++ D
Sbjct: 114 EDQS---LVAEVIDNTTSRGRTLRFLYDGTHEEFKKALFALGRTSLPAYIK--RPVEDAD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A +G+V AP G+HF+ L+ ++ GI+ F+TLH F + VED
Sbjct: 169 TEAYQTVFASEEGAVVAPFTGIHFSRELMKKMQIKGIEAGFITLHCSLSMFRSIDVEDLQ 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H + SE + AQ N + G +I ++GT+ L LETA T G I +SG+TN F
Sbjct: 229 KHKLDSEQMEVKPEFAQLFNKKSAEGRKICAIGTSVLLTLETAATVPGKIKEYSGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ V L+S FHLP ST+LM ++F G + T + Y AI Y+F +GD L+
Sbjct: 289 IFPPYEFQTVGSLLSTFHLPYSTMLMNQASFAGYDLTMQTYNTAIKKGYKFGCFGDLLLI 348
Query: 357 FQ 358
Sbjct: 349 LN 350
>gi|116071115|ref|ZP_01468384.1| queuosine biosynthesis protein [Synechococcus sp. BL107]
gi|116066520|gb|EAU72277.1| queuosine biosynthesis protein [Synechococcus sp. BL107]
Length = 364
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 131/356 (36%), Positives = 185/356 (51%), Gaps = 12/356 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+ LPP RIA PV PR ARL++ + V +L L D +V
Sbjct: 8 QLSSYDYHLPPERIAQAPVEPRHDARLLISPGQADGVRAVRHQKVWNLLEELRPGDLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L R + W ARP+K ++ GD+L
Sbjct: 68 NDTRVLKARLKVRRSG-----GGASELLVLEPRGEGQWLCLARPAKRMRPGDLLTIEGTA 122
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
R+ + +E ++ G +PLPPYI R P DA YQ
Sbjct: 123 ITLRVLHEDPASGGRIVQFPLDCRDAESIEALLNQCGEVPLPPYIDRHDPADA---ERYQ 179
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED +H
Sbjct: 180 TRYADRPGAVAAPTAGLHFSDELLAGLQRKGVGLARITLHVGLGTFRPVETEDLTQLELH 239
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITPG 300
SE ++A +A+ + R+++VGTTS+R LE A + G++ P++G N+ I PG
Sbjct: 240 SEWIEVNASVVEAIQQCRG---RVIAVGTTSVRALEGAAQLQGGVLKPFTGPVNLVIQPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF V L++NFHLPKS+LL+LVSA G E+ +Y AI H YRF+SYGD +
Sbjct: 297 YRFAVVQGLLTNFHLPKSSLLLLVSALIGREKLLALYAEAIDHEYRFFSYGDAMWI 352
>gi|257457753|ref|ZP_05622914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
vincentii ATCC 35580]
gi|257444803|gb|EEV19885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
vincentii ATCC 35580]
Length = 354
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 130/346 (37%), Positives = 172/346 (49%), Gaps = 15/346 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FDFDLP IA P R + RL+V++ ++D + SDLP FL + +V
Sbjct: 1 MFTKDFDFDLPKELIAQYPSAERGNDRLLVLNRRTGA---LTDAVFSDLPDFLPPDCLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHFFS 119
FNNTKV A+L E L + W + +K ++G F
Sbjct: 58 FNNTKVRHARLYAR------TGSGEAEFLLIEPLDEGFVWKTIVKRAKRQREGKEYIFDD 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + + F + R + G IPLPPYI R D
Sbjct: 112 GTRAVLIPPPSPNAAEADCKYIRFDRCIDD--RWLEANGHIPLPPYIK--RGDTDEDAER 167
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GSVAAPTAGLHFT +L L I VTLHVG GTF+PV+ E ++H
Sbjct: 168 YQTVYAKNTGSVAAPTAGLHFTEPILQELDKRHIARTAVTLHVGLGTFLPVRTEVVEEHT 227
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFIT 298
MHSE FI TA A+ I++VGTTS+R LE+A D ++ T+IFI
Sbjct: 228 MHSEKFFISDETAAAVEEAHRTEKTILAVGTTSVRTLESAWKSDTQQLSRGMHATDIFIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
PG+RF L++NFH P+S+L+MLVSAF G + Y+HAI
Sbjct: 288 PGFRFGLTGALLTNFHTPQSSLVMLVSAFAGRDNIFAAYRHAIEKN 333
>gi|282877728|ref|ZP_06286543.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
gi|281300300|gb|EFA92654.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
Length = 388
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 120/393 (30%), Positives = 185/393 (47%), Gaps = 43/393 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+LP +AL P + RD +RLMV+H +
Sbjct: 1 MKLSQFKFNLPEELVALYPHSVYHEIVDDKGEKHLSRMTRRDESRLMVLHRKSQTIDMFQ 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ + + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KNKKGKPVEGQYLEFRHVLDYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNREMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKR---PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP YI +R DA D D+QT +AK +G+V A GLH + +
Sbjct: 174 EEFKRELFALGEAPLPRYILNQREVPHADAHDMEDFQTIFAKNEGAVTAAATGLHVSREM 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI ++TLH G F ++VED H M SE IDA + +N K G R
Sbjct: 234 MKRMEIKGIHFAYITLHCGLSAFNNIEVEDLTKHKMDSEPMKIDAQACKIVNKAKQEGHR 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ +VGT+ ++ ETA DG++ + G+T+ FI P Y F D +++NF+ S LLM
Sbjct: 294 VCAVGTSVVKATETAVGTDGLLKEYDGWTSKFIFPPYDFGLADTMIANFYHSMSPLLMET 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+AF G E + Y A+ H Y+F YGD+ L+
Sbjct: 354 AAFGGYELVMEAYNLAVKHGYKFGCYGDSLLIL 386
>gi|319956387|ref|YP_004167650.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitratifractor salsuginis DSM 16511]
gi|319418791|gb|ADV45901.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitratifractor salsuginis DSM 16511]
Length = 343
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 128/361 (35%), Positives = 181/361 (50%), Gaps = 31/361 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + +D+ LPP +IA +PV P D+AR++V I DL FL S A+
Sbjct: 9 LTQSYDYTLPPKQIATQPVEPPDAARMLVFDRRDGS---IHHARFRDLERFLPSETALFL 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L+ + N + R +++G L F
Sbjct: 66 NDTRVIKARLYGTKA-----TGGRVELLLNKPLPDNEYLAMIR--GRVREGTRLSF---- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDARD 176
L+A V G + F EL+ +G +PLPPY+ R+ +
Sbjct: 115 -DEGLQAEVRALLPDGARRVRFYQEDKELDFSRLVEILERIGHVPLPPYMNREDTPEDTR 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ+ +A+ G+VAAPTA LHFT L RL S Y +TLHVGAGTF PV+ E
Sbjct: 174 --HYQSLFAREAGAVAAPTASLHFTPEQLERLKS-THPCYTLTLHVGAGTFKPVESEKIL 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE I A+ +++VGTT R +E G ++F
Sbjct: 231 EHPMHSEYFRIPPEAAE----YLRGDAPLLAVGTTVTRTVEYFARTSRT----EGECDLF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG R V+ L++NFHLPKSTL+MLVSAF G E+T ++Y+ AI YRFYSYGD L+
Sbjct: 283 LHPGNPPRRVNHLLTNFHLPKSTLIMLVSAFIGREKTLELYREAIREGYRFYSYGDAMLI 342
Query: 357 F 357
Sbjct: 343 L 343
>gi|254432744|ref|ZP_05046447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanobium
sp. PCC 7001]
gi|197627197|gb|EDY39756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanobium
sp. PCC 7001]
Length = 392
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 135/364 (37%), Positives = 190/364 (52%), Gaps = 13/364 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +DF LP RIA RPV PR +ARL+VV P C V DL L D +V
Sbjct: 20 LKLSSYDFPLPQERIAQRPVEPRHAARLLVVDPEPDC----RHRQVWDLQQELRPGDLLV 75
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R + + W ARP K + GD L +
Sbjct: 76 VNDTRVLRARLQARRPSGGAVELLVLEPWTGPGAAAGQWLCLARPGKRLHPGDGLEVVA- 134
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISL----VGTIPLPPYIARKRPIDARD 176
+GQ L TV+ + ++ + + G IPLPPYI P D+
Sbjct: 135 EGQPPLTVTVVARDGDTGGRVIQFPPDCDHAATLEPLLVRYGAIPLPPYIHEHHPSDS-- 192
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA G+VAAPTAGLH + LL+ + G+++ TLHVG GTF PV+ ED
Sbjct: 193 -DRYQTRYASRPGAVAAPTAGLHLSDELLAAIRRRGVEIATTTLHVGLGTFRPVETEDLR 251
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNI 295
+HSE + A+ + ++RGGR++++GTTS+R LE A G + P +G N+
Sbjct: 252 GLELHSEWVEVSHELVAAVQACRARGGRVIAIGTTSVRSLEGVAALHGGELKPHTGPVNL 311
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
I PG+RF V L++NFHLPKS+LL+LVSA G + +Y AI+ YRF+SYGD
Sbjct: 312 VIQPGFRFAVVQGLLTNFHLPKSSLLLLVSALLGRQRLLALYAEAIAREYRFFSYGDAMW 371
Query: 356 LFQK 359
+ +
Sbjct: 372 IAPE 375
>gi|123965702|ref|YP_001010783.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9515]
gi|229892796|sp|A2BV65|QUEA_PROM5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123200068|gb|ABM71676.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9515]
Length = 373
Score = 320 bits (819), Expect = 3e-85, Method: Composition-based stats.
Identities = 118/361 (32%), Positives = 183/361 (50%), Gaps = 10/361 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L S IA +P R +RLM+V + ++ DL A L D +V
Sbjct: 13 KLEAYDYCLDESLIAGKPSKVRHESRLMIVRDSSLKEDYSTNKYTKDLLAELREGDLVVI 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+L + + + + ++W A+P+K +K L+ S
Sbjct: 73 NDTKVMKARLK-----VELENGQLVELLVLEKSDQSTWLCLAKPAKKLKINKQLNLKSPF 127
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQI---SLVGTIPLPPYIARKRPIDARDYV 178
+ TG + F + +L + G IP+PPYI ++
Sbjct: 128 AKDIKLKISGIDDETGGRFIKFPENINDLISMNKLLDIFGEIPIPPYIKSSEE-ESFHEN 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L GI V +TLHVG GTF P+ ED D
Sbjct: 187 SYQTEYACNPGAVAAPTAGLHLSKSLISNLKKKGILVMPITLHVGYGTFKPIDQEDLSDL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
+H E + + + +K R++++GTTS+R LE+ + P + + ++ I
Sbjct: 247 KLHKEWVSVSKKVVEEIKRIKKTDRRVIAIGTTSVRALESCYSYAMKDFIPIAKYVDLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+AVD L++NFHLPKS+LL+LVSA G E +Y+ A +RF+SYGD +
Sbjct: 307 KPGYKFKAVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKATKEKFRFFSYGDAMYIS 366
Query: 358 Q 358
Sbjct: 367 P 367
>gi|152990890|ref|YP_001356612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitratiruptor sp. SB155-2]
gi|166216732|sp|A6Q446|QUEA_NITSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151422751|dbj|BAF70255.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitratiruptor sp. SB155-2]
Length = 340
Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats.
Identities = 131/362 (36%), Positives = 189/362 (52%), Gaps = 31/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +D+ LPP IA PV P D A+L++ I+ + +LP FL IV
Sbjct: 5 LKVDSYDYHLPPHLIAKEPVQPADRAKLLIYDRKTDT---ITHTIFKNLPQFLPQKTHIV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I ++ + ++V+ R +K G LHF
Sbjct: 62 FNDTKVIKARIFGHKSS-----GGKIELLINRPLENERFNVFIR--GKVKVGTTLHFSQG 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI-----ELERQISLVGTIPLPPYIARKRPIDAR 175
L+A V + G ++ F EL + +G+IPLPPYI R
Sbjct: 115 -----LQAIVEELIEDGTRIVTFYHDEKRLSFHELLPILDTIGSIPLPPYI--DRAAKKE 167
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +YQ +AK G+VAAPTA LHFT +L+ + + +FVTLHVGAGTF PV+
Sbjct: 168 DETNYQPIFAKKAGAVAAPTASLHFTEQMLNSM-AKEFPFHFVTLHVGAGTFKPVEANLI 226
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I T + + ++++VGTT R +E G ++
Sbjct: 227 TEHAMHSEYYEIPKDTIEVI----ESDEKVLAVGTTVTRTIEYYVRTKKSF----GECDL 278
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + VD L++NFHLPKSTL+MLV++F G+E TK++YQ AI YRFYSYGD L
Sbjct: 279 FLNPLNPPKRVDHLLTNFHLPKSTLIMLVASFIGLETTKRVYQEAIEKEYRFYSYGDAML 338
Query: 356 LF 357
+
Sbjct: 339 IL 340
>gi|304382488|ref|ZP_07364983.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
gi|304336319|gb|EFM02560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
Length = 439
Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats.
Identities = 121/404 (29%), Positives = 186/404 (46%), Gaps = 53/404 (13%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F+F L ++AL P V RD +LMV+H +
Sbjct: 42 MKLSQFNFKLTDDKVALYPHTDEHRVTNAEGKKSVFKVKRRDECKLMVLHRKSQKIDMYK 101
Query: 43 DHL----------------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEI 86
++ + + DA +FN+TKV A+L G + + + +I
Sbjct: 102 TDKDGKPLKDKKKKPVFLDFRNILDYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKI 157
Query: 87 SCTLHMRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF- 143
L + W V P++ I+ G+ L F D + A VID + L F
Sbjct: 158 EVFLLRELNAEMRLWDVLVEPARKIRIGNKLFF---DDSGTMVAEVIDNTTSRGRTLRFL 214
Query: 144 -SISGIELERQISLVGTIPLPPYIARKRPID--------ARDYVDYQTTYAKIQGSVAAP 194
E +R++ +G PLP YI + D D+ D+Q +AK +G+V AP
Sbjct: 215 YDCPHEEFKRELYALGEAPLPRYIIDHKDKDGNPDRPTLEEDFEDFQCVFAKNEGAVTAP 274
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
GLHF+ L+ R+ GI F+TLH G G F ++VED H M SE +I A +
Sbjct: 275 ATGLHFSRELMKRMEIKGINFAFITLHCGLGNFNNIEVEDLTKHKMESEQMYIGAEACRT 334
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFH 314
+N K G RI +VG++ ++ ETA DG + + G+T+ FI P Y F D +++NF+
Sbjct: 335 VNEAKKTGHRICAVGSSVIKATETAVGPDGQLKEYDGWTSKFIFPPYEFGLADTMVANFY 394
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
P STLLM +AF G + + Y A+ + Y+F YGD L+
Sbjct: 395 HPLSTLLMATAAFGGYDLVMEAYDLALKNDYKFGCYGDAMLILN 438
>gi|149193933|ref|ZP_01871031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Caminibacter mediatlanticus TB-2]
gi|149135886|gb|EDM24364.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Caminibacter mediatlanticus TB-2]
Length = 340
Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats.
Identities = 128/368 (34%), Positives = 183/368 (49%), Gaps = 43/368 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND-AI 59
++V +D+DLP IA P+ PRD A+L+V I ++ F+ D
Sbjct: 5 LLVSNYDYDLPEELIAKYPITPRDEAKLLVYDRKK---DKIIHTKFKNILDFV--GDKRF 59
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+FN+TKVI A++ G + + L+ + + +K+G L F
Sbjct: 60 IFNDTKVIKARIFGKKES-----GGRVELLLNRPFNNDF---LVYIRGKVKRGTKLFF-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSIS----------GIELERQISLVGTIPLPPYIARK 169
L A V + G ++ F + EL + +G IPLPPYI
Sbjct: 110 ---DRGLVAEVKELLEDGSRVVDFKLRMEYGEWKILDFYELVNILEEIGHIPLPPYIK-- 164
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
R + D +YQT +AK +G+VAAPTA LHFT NLL ++ ++TLHVGAGTF P
Sbjct: 165 RKDEEIDEKEYQTIFAKKEGAVAAPTASLHFTKNLLDKIEKKA----YLTLHVGAGTFKP 220
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VED H MHSE I TA+ L IV+VGTT+ R +E
Sbjct: 221 VEVEDIRFHKMHSEFFEIPKNTAEIL----DSNEEIVAVGTTATRTIEYYART----KKL 272
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G +F+ P V+ L++NFHLPKSTL+MLV++F G ++T ++Y+ A YRFYS
Sbjct: 273 KGECGLFLNPLNPPIRVNHLITNFHLPKSTLIMLVASFIGRKKTLEIYEIAKKEKYRFYS 332
Query: 350 YGDTSLLF 357
YGD L+
Sbjct: 333 YGDAMLII 340
>gi|315637225|ref|ZP_07892445.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri JV22]
gi|315478497|gb|EFU69210.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri JV22]
Length = 340
Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 190/363 (52%), Gaps = 33/363 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +D++LP ++IA PV P DSA+L++ + + I D+ FL ND +
Sbjct: 5 LKTSSYDYNLPKNQIATYPVTPADSAKLLIFNRST---NTIIHSTFKDILEFL-PNDLSI 60
Query: 61 F-NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
F N+TKVI A++ GV+ +I L+ + + + V R ++ G L F
Sbjct: 61 FLNDTKVIKARIFGVKDS-----GGQIELLLNKPLFMDRYLVMIR--GKVRVGTKLLF-- 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGI-----ELERQISLVGTIPLPPYIARKRPIDA 174
L A V + G ++ F L ++ +G +PLPPY+ R +
Sbjct: 112 ---DENLSAIVEEVNEDGSRIVEFFQDEKKLDFLSLVEILNKIGHLPLPPYMN--REDEK 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+D +YQT +AK G+VAAPTA LHFT LL L + ++TLHVGAGTF PV VED
Sbjct: 167 QDEQNYQTLFAKNYGAVAAPTASLHFTPELLKNLEEK-YGLNYLTLHVGAGTFKPVDVED 225
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MHSE I + ++++VGTT R +E + I G +
Sbjct: 226 ILSHPMHSEYFEIGIDA----KKNLDKANKVLAVGTTVTRTIEYYARTNKI----QGECD 277
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + VD L++NFHLPKSTL+MLV++F G+E+T ++Y+ AI YRFYSYGD
Sbjct: 278 LFLNPANKPIKVDYLLTNFHLPKSTLIMLVASFIGLEKTLEIYETAIKENYRFYSYGDGM 337
Query: 355 LLF 357
L+
Sbjct: 338 LII 340
>gi|157737500|ref|YP_001490183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri RM4018]
gi|167016402|sp|A8EU90|QUEA_ARCB4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157699354|gb|ABV67514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri RM4018]
Length = 340
Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 190/363 (52%), Gaps = 33/363 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +D++LP ++IA PV P DSA+L++ + + I D+ FL ND +
Sbjct: 5 LKTSSYDYNLPKNQIATYPVTPADSAKLLIFNRST---NTIIHSTFKDILEFL-PNDLSI 60
Query: 61 F-NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
F N+TKVI A++ GV+ +I L+ + + + V R ++ G L F
Sbjct: 61 FLNDTKVIKARIFGVKDS-----GGQIELLLNKPLFMDRYLVMIR--GKVRVGTKLLF-- 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGI-----ELERQISLVGTIPLPPYIARKRPIDA 174
L A V + G ++ F L ++ +G +PLPPY+ R +
Sbjct: 112 ---DENLSAIVEEVDEDGSRIVEFFQDEKKLDFLSLVEILNKIGHLPLPPYMN--REDEK 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+D +YQT +AK G+VAAPTA LHFT LL L + ++TLHVGAGTF PV VED
Sbjct: 167 QDEQNYQTLFAKNYGAVAAPTASLHFTPELLKNLEEK-YGLNYLTLHVGAGTFKPVDVED 225
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MHSE I + ++++VGTT R +E + I G +
Sbjct: 226 ILSHPMHSEYFEIGIDA----KKNLDKANKVLAVGTTVTRTIEYYARTNKI----QGECD 277
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + VD L++NFHLPKSTL+MLV++F G+E+T ++Y+ AI YRFYSYGD
Sbjct: 278 LFLNPANKPIKVDYLLTNFHLPKSTLIMLVASFIGLEKTLEIYETAIKENYRFYSYGDGM 337
Query: 355 LLF 357
L+
Sbjct: 338 LII 340
>gi|260592691|ref|ZP_05858149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
gi|260535461|gb|EEX18078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
Length = 394
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 118/400 (29%), Positives = 188/400 (47%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVI- 41
M + +F F+LP ++AL P + RD +RLMVVH +
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSKRVLTRSDGSTQTFTITRRDESRLMVVHRKSGKIDMFK 60
Query: 42 --------SDH--LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D D+ + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEVNGDPTEDDYIRFKDVFDYFEEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPIDARDY---------VDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + + ++Q+ +A+ +G+V+AP +
Sbjct: 174 EEFKRELFALGEAPLPRYIIDNRPKEEGEEFAHATKEDMENFQSVFARNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G G F ++VED H M SE I+A + N+
Sbjct: 234 HFSEHMMKMMEIRGIKKSFITLHCGLGNFHDIEVEDLTKHKMDSEEMHINAEACEIANNA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G + +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KKAGHHLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYQPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLIMEAYDKAVKNGYMFGCFGDSLLILN 393
>gi|78777854|ref|YP_394169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurimonas denitrificans DSM 1251]
gi|91207333|sp|Q30PZ7|QUEA_SULDN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78498394|gb|ABB44934.1| Queuosine biosynthesis protein [Sulfurimonas denitrificans DSM
1251]
Length = 342
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 126/362 (34%), Positives = 188/362 (51%), Gaps = 30/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +DF LP IA +P PRDSA+L+V IS D F+ N A++
Sbjct: 6 LLTSSYDFTLPEELIATQPANPRDSAKLLVYDR---ASDEISHVHFYDFEKFIPKNCALI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + L + + ++ +++ +K G + F +
Sbjct: 63 FNDTKVIKARLFGQKESGGK-------IELLINRALDAHNIHVFTRGKVKIGTKISFGLE 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFS-----ISGIELERQISLVGTIPLPPYIARKRPIDAR 175
L A +I+ G ++ F + E+ I +G IPLPPYI R +
Sbjct: 116 -----LFAKIIELLEDGSRVVNFYKNDSILRFEEILPIIDKIGHIPLPPYIQ--REDNKD 168
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D ++YQ+ +AK +G+VAAPTA LHFT R+ + ++TLHVG+GTF PV+ E
Sbjct: 169 DEIEYQSVFAKEEGAVAAPTASLHFTKEQHERVCTK-FTHAYITLHVGSGTFKPVECEKI 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I + L I+SVGTTS R +E G N+
Sbjct: 228 LEHTMHSEYYDISDRAKELL----DSKVSILSVGTTSTRTIEFYARNK---EHQRGEANL 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + VD +++NFHLPKSTLLMLV++F G+++ +++Y+ AI YRFYSYGD L
Sbjct: 281 FLHPKNKPLRVDHILTNFHLPKSTLLMLVASFVGVDKAQELYKIAIEKEYRFYSYGDAML 340
Query: 356 LF 357
+
Sbjct: 341 IL 342
>gi|33865206|ref|NP_896765.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. WH 8102]
gi|46576935|sp|Q7U8E8|QUEA_SYNPX RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33638890|emb|CAE07187.1| Queuosine biosynthesis protein [Synechococcus sp. WH 8102]
Length = 366
Score = 316 bits (811), Expect = 3e-84, Method: Composition-based stats.
Identities = 137/363 (37%), Positives = 193/363 (53%), Gaps = 18/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP RIA P PR SAR+++V P +V DL L D +V
Sbjct: 7 LQLSSYDYPLPQERIAQVPAEPRHSARMLMVPPATQALEAARHGVVWDLLEELQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L R + W ARP+K ++ GD+L
Sbjct: 67 VNNTRVLKARLKVRRSG-----GGLSELLVLEPRGEGRWLCLARPAKRMRPGDVLTI--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDY 177
DG S + D +G L+ F + +E ++ G +PLPPYI R P D
Sbjct: 119 DGTSIGLTVLEDDAASGGRLVQFPTDCRDAETIETLLNQWGEVPLPPYIDRHDPDDV--- 175
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLHF+ LL+ L G+++ +TLHVG GTF PV+ D
Sbjct: 176 ERYQTRYADRPGAVAAPTAGLHFSDELLAGLQLKGVELARITLHVGLGTFRPVETNDLTR 235
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-NPWSGFTNIF 296
+HSE + A +A+ + R+++VGTTS+R LE A ++G + P++G N+
Sbjct: 236 LELHSEWVEVSAAVVEAIQRCRG---RVIAVGTTSVRALEGAAQQNGGVLQPFTGPVNLV 292
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGYRF V LM+NFHLPKS+LL+LVSA G E+ +Y AI YRF+SYGD +
Sbjct: 293 IQPGYRFAVVQGLMTNFHLPKSSLLLLVSALIGREKLLAIYTEAIERNYRFFSYGDAMWI 352
Query: 357 FQK 359
+
Sbjct: 353 APE 355
>gi|88809266|ref|ZP_01124775.1| Queuosine biosynthesis protein [Synechococcus sp. WH 7805]
gi|88787208|gb|EAR18366.1| Queuosine biosynthesis protein [Synechococcus sp. WH 7805]
Length = 374
Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats.
Identities = 132/363 (36%), Positives = 190/363 (52%), Gaps = 12/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ LP IA RPV PR +ARL++V + V D + L D +V
Sbjct: 7 LLLSAYDYQLPAECIAQRPVEPRHAARLLMVPALEESSSQVRHATVWDWQSELQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R W ARP+K ++ GD + +
Sbjct: 67 VNDTRVLQARLRVRRSGGGLGELLV-----LEPRGEGRWLCLARPAKKLRPGDQVWLEAL 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDY 177
+ S + +G ++ F + + +E + G +PLPPYI R D D
Sbjct: 122 EQDSLPLQVLASDSASGGRIVQFPPTYNDAIAIEALLQRYGEVPLPPYITRH---DDSDQ 178
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + +LL + + G+ + VTLHVG GTF PV+ ED D
Sbjct: 179 ERYQTRYASRPGAVAAPTAGLHLSDDLLQAIRARGVTIASVTLHVGLGTFRPVETEDLRD 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
+HSE + + A+ + RGGR+++VGTTS+R LE A G + P G ++
Sbjct: 239 LSLHSEWVEVSSELVAAVEACHRRGGRVIAVGTTSVRALEGAAQAGGGKLQPLKGPVDLV 298
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGYRF V L++NFHLPKS+LL+LVSA G E +Y A+ + YRFYSYGD +
Sbjct: 299 IQPGYRFSVVQGLLTNFHLPKSSLLLLVSALIGRERLLSLYAQAVENHYRFYSYGDAMWI 358
Query: 357 FQK 359
K
Sbjct: 359 APK 361
>gi|78213525|ref|YP_382304.1| queuosine biosynthesis protein [Synechococcus sp. CC9605]
gi|123577715|sp|Q3AI33|QUEA_SYNSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78197984|gb|ABB35749.1| queuosine biosynthesis protein [Synechococcus sp. CC9605]
Length = 366
Score = 316 bits (809), Expect = 4e-84, Method: Composition-based stats.
Identities = 139/364 (38%), Positives = 201/364 (55%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LPP RIA PV PR SARL++V P + V DL L D +V
Sbjct: 7 LQLSSYDYPLPPERIAQAPVEPRHSARLLMVPPQGEPSTDAAHGQVWDLLEQLQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R + W ARP+K ++ GDIL
Sbjct: 67 VNDTRVLKARLAVRRSG-----GGLSELLVLEPRGEGRWLCLARPAKRMRPGDILTI--- 118
Query: 121 DGQSRLEATVI-DKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARD 176
DG + + TV+ + +G L+ F + +E ++ VG +PLPPYI R P D++
Sbjct: 119 DGSTSISLTVLAEDPASGGRLVQFPSDCRDAETIEGLLNDVGEVPLPPYIERHDPSDSQ- 177
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED
Sbjct: 178 --RYQTRYADRPGAVAAPTAGLHFSDELLAGLQQKGVDLARITLHVGLGTFRPVETEDLT 235
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNI 295
+HSE + +A+ + + R+++VGTTS+R LE A G++ P++G ++
Sbjct: 236 ALELHSEWVDVSPAVVEAVQACRG---RVIAVGTTSVRALEGAAQAHGGVLKPYTGPVDL 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
I PGYRF V L++NFHLPKS+LL+LVSA G E+ ++Y AI YRF+SYGD
Sbjct: 293 VIQPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGREKLLELYHEAIERDYRFFSYGDAMW 352
Query: 356 LFQK 359
+ +
Sbjct: 353 IAPE 356
>gi|72383576|ref|YP_292931.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. NATL2A]
gi|91207392|sp|Q46H06|QUEA_PROMT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|72003426|gb|AAZ59228.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Prochlorococcus marinus str. NATL2A]
Length = 365
Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 126/362 (34%), Positives = 190/362 (52%), Gaps = 11/362 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +++DLP IA P R A+LM+V L L + V D+ L D +V
Sbjct: 8 LLSSYNYDLPNELIAQSPTKSRHDAKLMIVKDGLDDSLNLVHAKVWDIKDILKPADLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L L W RP++ ++ GD L
Sbjct: 68 NNTRVVKARLK-----IRLSGGGAGELLLMEPRGDGRWLCLGRPARRMRGGDQLWLDMSR 122
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARDYV 178
S + + TG ++ FS +++ G +PLPPYI + + D
Sbjct: 123 DNSLILKVIDKDERTGGRIIQFSNEFTSWTEMENILDLCGEVPLPPYIDKDKSSD--HEE 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A G++AAPTAGLH + L+ L + GIK+ +TLHVG GTF P++ ED
Sbjct: 181 SYQTRFASKPGAIAAPTAGLHLSDELIENLKTRGIKIAQITLHVGLGTFRPLEKEDLSQL 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+HSE + T +A+ + K GG++ +VGTTS+R LE A G + P+ G ++ I
Sbjct: 241 HLHSEWIEVTEETIKAITNCKEDGGKVFAVGTTSVRALEAAYLSGRGALKPYEGKVDLVI 300
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F +D L++NFHLPKS+LL+LVSA G + K+Y+ AIS+ YRF+SYGD L+
Sbjct: 301 KPGFKFSVIDGLLTNFHLPKSSLLLLVSALIGRKRMLKLYKQAISNKYRFFSYGDAMLIT 360
Query: 358 QK 359
+
Sbjct: 361 PE 362
>gi|307565541|ref|ZP_07628021.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
gi|307345700|gb|EFN91057.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
Length = 394
Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 119/399 (29%), Positives = 188/399 (47%), Gaps = 49/399 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVI- 41
M + +F F LP ++AL P V RD RLMVVH +
Sbjct: 1 MKLSQFKFSLPEDQVALYPHSSERILKRADGSEQKFTVVRRDEGRLMVVHRKSGKIDMFK 60
Query: 42 ---------SDH-LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEVTGEPKEEDYIRFRDVLNYFDDGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
++ + W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNADMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKR---------PIDARDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI R D +Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELFSLGEAPLPRYIIDNRPKKEGEDFAHATEDDLEYFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G+F ++VED H M SE I+A +NS
Sbjct: 234 HFSEHMMKMMEIKGIKSAFITLHCALGSFHDIEVEDLTKHKMDSEEMHINAEACAVVNST 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G ++ +VG + ++ ETA DG++ + G+TN FI P Y+F D ++ NF+ P S
Sbjct: 294 KKDGHKVCAVGASVVKACETAVGTDGLLKEYDGWTNKFIFPPYKFGLADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
LLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 VLLMETAAFGGYDLIMQAYDLAVKNGYMFGCFGDSMLIL 392
>gi|78184240|ref|YP_376675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CC9902]
gi|123581889|sp|Q3AZ46|QUEA_SYNS9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78168534|gb|ABB25631.1| queuosine biosynthesis protein [Synechococcus sp. CC9902]
Length = 364
Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats.
Identities = 133/361 (36%), Positives = 192/361 (53%), Gaps = 18/361 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + + LPP RIA PV PR ARL++ V DL L S D +V
Sbjct: 8 QLSSYAYHLPPERIAQAPVEPRHDARLLIAPGQTDGVQAARHQKVWDLLEELRSGDLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A++ R + W ARP+K ++ GD+L D
Sbjct: 68 NDTRVLKARIKVRRSG-----GGVSELLVLEPRGDGQWLCLARPAKRMRPGDLLTL---D 119
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDYV 178
G + + + +G ++ F + + +E ++ G +PLPPYI R D D
Sbjct: 120 GTAITLRVLHEDPASGGRIVQFPLDCRDAESIEALLNQCGEVPLPPYIDRH---DPGDAE 176
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED
Sbjct: 177 RYQTRYADRPGAVAAPTAGLHFSDELLAALQGKGVGLARITLHVGLGTFRPVETEDLTQL 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
+HSE ++A +A+ + R+++VGTTS+R LE A + G++ P++G N+ I
Sbjct: 237 ELHSEWIEVNASVVEAIQQCRG---RVIAVGTTSVRALEGAAQLQGGVLKPFTGPVNLVI 293
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF V L++NFHLPKS+LL+LVSA G E+ +Y AI H YRF+SYGD +
Sbjct: 294 QPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGREKLLALYAEAIDHEYRFFSYGDAMWIS 353
Query: 358 Q 358
Sbjct: 354 P 354
>gi|317503918|ref|ZP_07961926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
gi|315664944|gb|EFV04603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
Length = 388
Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats.
Identities = 121/392 (30%), Positives = 182/392 (46%), Gaps = 43/392 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+L ++AL P V RD RLMV+H +
Sbjct: 1 MKLSQFKFNLAKEQVALYPHSFTRVFENEDGTKGSFQVTRRDECRLMVLHKRSGQIDMFK 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDADGNPIEGEYLDFRNILDYFDKGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DETGSMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKR---PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP Y+ R D VD+QT +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKRELFALGEAPLPRYVIDNRTEPHATPDDLVDFQTVFAKKEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI ++TLH G G F ++VED H M SE IDA +N K G
Sbjct: 234 MKRMEIRGIHDAYLTLHCGLGNFNSIEVEDLTKHKMDSEQMVIDAEACAKVNQAKREGHH 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+++VG + ++ ETA DG++ + G+TN FI P Y F D +++NF+ P STLLM
Sbjct: 294 VLAVGVSVVKATETAVGTDGMLKEYDGWTNKFIFPPYDFHLADSMVANFYHPYSTLLMTT 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+AF G + + Y A + Y F YGD L+
Sbjct: 354 AAFGGYDAVMECYNLASENGYMFGCYGDALLI 385
>gi|159902945|ref|YP_001550289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9211]
gi|238687195|sp|A9BE25|QUEA_PROM4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|159888121|gb|ABX08335.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9211]
Length = 375
Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats.
Identities = 132/361 (36%), Positives = 191/361 (52%), Gaps = 12/361 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++L IA +P+ PR ARLMVV + L +S V +L L + D +V N
Sbjct: 10 LSSYDYELDSKLIAQKPLNPRHDARLMVVSKDNGPNLCVSHLKVWNLLDELRAGDLLVIN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L + L W A+P+K GD + + +
Sbjct: 70 NTRVLKARL-----RVRLKSGAMAELLLLEPHGDGRWLCLAKPAKKFLPGDYVWMEALEQ 124
Query: 123 QSRLEATVIDKWNTGEILLVFSISGI---ELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+S + TG ++ F +E + G +PLPPYI R D D
Sbjct: 125 ESLKLQVLTKDLETGGRIVQFPQEFSNRKSIENLLERYGEVPLPPYI---RQHDPSDADR 181
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A GSVAAPTAGLH + +L+ LI GI+ VTLHVG GTF P++ ED +
Sbjct: 182 YQTRFASTPGSVAAPTAGLHLSDEILNALIQRGIEKASVTLHVGLGTFRPIEEEDLTNLK 241
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFIT 298
+HSE + A+ + +SRGGRI +VGTT++R LE + G + + G ++ I
Sbjct: 242 LHSEWVEVGEEVVSAVQACRSRGGRIFAVGTTTVRSLEASFLLGGGSMKAFQGLVDLVIK 301
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+F V+ L++NFHLPKS+LL+LVSA G E ++YQ AI YRF+SYGD +
Sbjct: 302 PGYQFGVVNGLLTNFHLPKSSLLLLVSALIGRERLLELYQEAIERKYRFFSYGDAMFITP 361
Query: 359 K 359
+
Sbjct: 362 E 362
>gi|224417922|ref|ZP_03655928.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter canadensis MIT 98-5491]
Length = 346
Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats.
Identities = 120/365 (32%), Positives = 183/365 (50%), Gaps = 30/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++++ +D+DLP IAL P+ P+++ARL+V I+ D FL +V
Sbjct: 4 LLLESYDYDLPKELIALNPIMPQENARLLVYDRK---DHSITHTTFRDFAKFLPKETLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I H + N + + + +K G+I+ F
Sbjct: 61 FNDTKVIPARIYGKKLQKEALGGGKIEALFHKEIMENLYLMQLK--GRLKIGNIVEFVG- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--------ELERQISLVGTIPLPPYIARKRPI 172
+ A ++ G + F E + G IPLPPYI R
Sbjct: 118 -----VFAKILKDCGMGFKEVSFFRDEKCLLPLSRQEFFDFLEQFGHIPLPPYIK--RED 170
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D V+Y + +AK G++AAPTA LHF L + FVTLHVGAGTF+ V
Sbjct: 171 NQEDRVNYNSVFAKNVGAIAAPTASLHFNQEAFKALQ-RDFESAFVTLHVGAGTFIGVST 229
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E+ +H MH E I + + + V I ++GTT+ R++E G
Sbjct: 230 ENILEHKMHQETFVIPKESVEKIKKVSH----ITAIGTTATRVVEYFART----KQTQGE 281
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
++F+ P + + L++NFHLPK+TLLMLV++F G+EETK++Y+ AI YRFYSYGD
Sbjct: 282 CDLFLHPQNKPIITNALLTNFHLPKTTLLMLVASFVGLEETKRIYKQAIEEKYRFYSYGD 341
Query: 353 TSLLF 357
L+
Sbjct: 342 GMLVL 346
>gi|126642933|ref|YP_001085917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 17978]
Length = 305
Score = 315 bits (807), Expect = 8e-84, Method: Composition-based stats.
Identities = 115/314 (36%), Positives = 163/314 (51%), Gaps = 18/314 (5%)
Query: 46 VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP 105
+D+ D +V N+TKV+ A+L G R I + ++ + + +
Sbjct: 2 FTDIIDLFEEGDLLVLNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKA 56
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
S K G L + + + + L + + G +P+PPY
Sbjct: 57 SNSPKAGAELFVGADNIPVIVRGRHEN--------LFVVEFSQPILPVLEQYGQLPIPPY 108
Query: 166 IARKRPIDARDYVDYQTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
R + D YQT + + SVAAPTA LHF LL++L G+K FVTLHVG
Sbjct: 109 FN--REAEEIDTERYQTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVG 166
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TE 282
AGTFMPV+ +D +H+MHSE + T + + K+RG ++++VGTT+ R LE+A
Sbjct: 167 AGTFMPVRTDDITNHVMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAH 226
Query: 283 DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
G I W+G T IFI PGY F VD L++NFHLP+STLLMLVSA E Y+HA+
Sbjct: 227 GGKIAAWTGDTQIFIYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVK 286
Query: 343 HAYRFYSYGDTSLL 356
YRF+SYGD L+
Sbjct: 287 DRYRFFSYGDAMLI 300
>gi|253827261|ref|ZP_04870146.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Helicobacter canadensis MIT 98-5491]
gi|253510667|gb|EES89326.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Helicobacter canadensis MIT 98-5491]
Length = 351
Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 120/365 (32%), Positives = 183/365 (50%), Gaps = 30/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++++ +D+DLP IAL P+ P+++ARL+V I+ D FL +V
Sbjct: 9 LLLESYDYDLPKELIALNPIMPQENARLLVYDRK---DHSITHTTFRDFAKFLPKETLLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I H + N + + + +K G+I+ F
Sbjct: 66 FNDTKVIPARIYGKKLQKEALGGGKIEALFHKEIMENLYLMQLK--GRLKIGNIVEFVG- 122
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--------ELERQISLVGTIPLPPYIARKRPI 172
+ A ++ G + F E + G IPLPPYI R
Sbjct: 123 -----VFAKILKDCGMGFKEVSFFRDEKCLLPLSRQEFFDFLEQFGHIPLPPYIK--RED 175
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D V+Y + +AK G++AAPTA LHF L + FVTLHVGAGTF+ V
Sbjct: 176 NQEDRVNYNSVFAKNVGAIAAPTASLHFNQEAFKALQ-RDFESAFVTLHVGAGTFIGVST 234
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E+ +H MH E I + + + V I ++GTT+ R++E G
Sbjct: 235 ENILEHKMHQETFVIPKESVEKIKKVSH----ITAIGTTATRVVEYFART----KQTQGE 286
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
++F+ P + + L++NFHLPK+TLLMLV++F G+EETK++Y+ AI YRFYSYGD
Sbjct: 287 CDLFLHPQNKPIITNALLTNFHLPKTTLLMLVASFVGLEETKRIYKQAIEEKYRFYSYGD 346
Query: 353 TSLLF 357
L+
Sbjct: 347 GMLVL 351
>gi|283954143|ref|ZP_06371668.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 414]
gi|283794422|gb|EFC33166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 414]
Length = 342
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 183/363 (50%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ LP IA P P++ ARL+V + I +L FL N AI
Sbjct: 5 LLLSNYDYTLPNKLIANYPANPKEDARLLVFNRKN---KQIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ S + +KK +ILHF
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSKSPLFLVQIKGRVKKDEILHFKQ 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGI-----ELERQISLVGTIPLPPYIARKRPIDA 174
L+A +++ + G + F + L + +G IPLPPYI R +
Sbjct: 116 -----NLKAQIVELLDDGLRKVQFFQNDKILDTSNLYNLLDKIGHIPLPPYIK--REDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSKTMLENLRKKHEIY-HLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + + I+ VGTT R +E SGF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEII----DSKQAILGVGTTVTRTIEYYART----KTKSGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLYPQNQPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|313141463|ref|ZP_07803656.1| ribosyltransferase-isomerase [Helicobacter canadensis MIT 98-5491]
gi|313130494|gb|EFR48111.1| ribosyltransferase-isomerase [Helicobacter canadensis MIT 98-5491]
Length = 342
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 120/363 (33%), Positives = 181/363 (49%), Gaps = 30/363 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IAL P+ P+++ARL+V I+ D FL +VFN
Sbjct: 2 LESYDYDLPKELIALNPIMPQENARLLVYDRK---DHSITHTTFRDFAKFLPKETLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + +I H + N + + + +K G+I+ F
Sbjct: 59 DTKVIPARIYGKKLQKEALGGGKIEALFHKEIMENLYLMQLK--GRLKIGNIVEFVG--- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGI--------ELERQISLVGTIPLPPYIARKRPIDA 174
+ A ++ G + F E + G IPLPPYI R +
Sbjct: 114 ---VFAKILKDCGMGFKEVSFFRDEKCLLPLSRQEFFDFLEQFGHIPLPPYIK--REDNQ 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D V+Y + +AK G++AAPTA LHF L + FVTLHVGAGTF+ V E+
Sbjct: 169 EDRVNYNSVFAKNVGAIAAPTASLHFNQEAFKALQ-RDFESAFVTLHVGAGTFIGVSTEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MH E I + + + V I ++GTT+ R++E G +
Sbjct: 228 ILEHKMHQETFVIPKESVEKIKKVSH----ITAIGTTATRVVEYFART----KQTQGECD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + + L++NFHLPK+TLLMLV++F G+EETK++Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNKPIITNALLTNFHLPKTTLLMLVASFVGLEETKRIYKQAIEEKYRFYSYGDGM 339
Query: 355 LLF 357
L+
Sbjct: 340 LVL 342
>gi|124025170|ref|YP_001014286.1| queuosine biosynthesis protein [Prochlorococcus marinus str.
NATL1A]
gi|166216736|sp|A2C0L1|QUEA_PROM1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123960238|gb|ABM75021.1| Queuosine biosynthesis protein [Prochlorococcus marinus str.
NATL1A]
Length = 365
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 126/362 (34%), Positives = 189/362 (52%), Gaps = 11/362 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +++DLP IA P R A+LM++ L L + V D+ L D +V
Sbjct: 8 LLSSYNYDLPKDLIAQSPTRSRHDAKLMIIKDGLDDSLNLVHAKVWDIKDILKPADLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L + W RP++ ++ GD L +
Sbjct: 68 NNTRVVKARLK-----IRLSGGGAGELLIMEPRGDGRWLCLGRPARRMRGGDQLWLDTSR 122
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQI---SLVGTIPLPPYIARKRPIDARDYV 178
S + + TG ++ FS L G +PLPPYI + R +
Sbjct: 123 DNSLILKVIDKDEKTGGRIIQFSNEFTSWTEMENLLDLCGEVPLPPYIDKDR--SSGHEE 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT +A G++AAPTAGLH + L+ L GI++ +TLHVG GTF P++ ED
Sbjct: 181 NYQTRFASKPGAIAAPTAGLHLSDELIENLKIRGIRIAQITLHVGLGTFRPLEKEDLSQL 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+HSE + T +A+ + K GG++ +VGTTS+R LE A G + P+ G N+ I
Sbjct: 241 HLHSEWIEVTEETIKAITTCKEEGGKVFAVGTTSVRALEAAYLSGRGALKPYEGKVNLVI 300
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F +D L++NFHLPKS+LL+LVSA G K+Y+HAIS+ YRF+SYGD L+
Sbjct: 301 KPGFKFSVIDGLLTNFHLPKSSLLLLVSALIGRNRMLKLYKHAISNKYRFFSYGDAMLIT 360
Query: 358 QK 359
+
Sbjct: 361 PE 362
>gi|260436284|ref|ZP_05790254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. WH 8109]
gi|260414158|gb|EEX07454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. WH 8109]
Length = 366
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 132/357 (36%), Positives = 188/357 (52%), Gaps = 12/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LPP RIA PV PR SARL++V P + V DL L D +V
Sbjct: 7 LQLSSYDYPLPPERIAQAPVEPRHSARLLMVPPQEEPSTDAAHGQVWDLIEQLQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R + W ARP+K ++ GD L
Sbjct: 67 VNDTRVLKARLAVRRSG-----GGLSELLVLEPRGEGRWLCLARPAKRMRPGDSLTIDGT 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A +E ++ VG +PLPPYI R P D++ Y
Sbjct: 122 SISLTVLAEDPASGGRVVQFPSDCRDAETIEGLLNDVGEVPLPPYIERHDPSDSQ---RY 178
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED +
Sbjct: 179 QTRYADRPGAVAAPTAGLHFSDELLAGLQQKGVDLARITLHVGLGTFRPVETEDLTALEL 238
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + +A+ + + R+++VGTTS+R LE A G++ P++G N+ I P
Sbjct: 239 HSEWVDVSPAVVEAVQACRG---RVIAVGTTSVRALEGAAQAHGGVLKPYTGPVNLVIQP 295
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ + L++NFHLPKS+LL+LVSA G E K+Y AI +YRF+SYGD +
Sbjct: 296 GYQFKVIQALLTNFHLPKSSLLLLVSALIGRETLLKLYAEAIERSYRFFSYGDAMWI 352
>gi|281423716|ref|ZP_06254629.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
gi|299141219|ref|ZP_07034356.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
gi|281402268|gb|EFB33099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
gi|298577179|gb|EFI49048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
Length = 388
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 121/392 (30%), Positives = 181/392 (46%), Gaps = 43/392 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+L ++AL P V RD RLMV+H +
Sbjct: 1 MKLSQFKFNLAEEQVALYPHSFTRVFENEDGTKDSFQVTRRDECRLMVLHKRSGQIEMFK 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDSKGNPIEGEYLDFRNILDYFGEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
++P W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNPEMRLWDVLVEPARKIRIGNKLFF---DETGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKR---PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP YI R D D+QT +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKRELFALGEAPLPRYIIDNREEPHATPEDLEDFQTVFAKNEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI ++TLH G G F ++VED H M SE + A Q +N K
Sbjct: 234 MKRMEIRGIHDAYITLHCGLGNFNSIEVEDLTKHKMDSEQMIVSAEACQRVNQTKRERHH 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+++VG + ++ ETA DG++ + G+TN FI P Y F D +++NF+ P STLLM
Sbjct: 294 VLAVGVSVVKATETAVGTDGMLKEYDGWTNKFIFPPYDFDLADSMVANFYHPYSTLLMTT 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+AF G E + Y A + Y F YGD L+
Sbjct: 354 AAFGGYEAVMECYNLAAENGYMFGCYGDALLI 385
>gi|57168187|ref|ZP_00367326.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli RM2228]
gi|57020561|gb|EAL57230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli RM2228]
Length = 341
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 130/366 (35%), Positives = 183/366 (50%), Gaps = 34/366 (9%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M + +D+ LP IA PV P++ A+L+V IS +L FL +
Sbjct: 1 MKDLLLSSYDYTLPNELIATYPVHPKEDAKLLVFERKN---NQISHTTFKNLQDFL-PDC 56
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSW-SVYARPSKVIKKGDILH 116
A+ FN+TKVI A++ G + +I LH + A+ +KK +IL
Sbjct: 57 ALFFNDTKVIKARIYGNKSS-----GGKIELFLHQPCLDSQDSLFLAQIKGRVKKDEILS 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRP 171
F + L+ VI+ + G + F + L +G IPLPPYI R
Sbjct: 112 F-----EQNLKVKVIELLDDGLRKVQFFQNDEVLNTFKLYELLDTIGHIPLPPYIK--RS 164
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D DYQ+ +AK G+VAAPTA LHF+ N+L L ++Y +TLHVGAGTF V+
Sbjct: 165 DEKSDLEDYQSIFAKNLGAVAAPTASLHFSENMLENL-KKRHEIYHLTLHVGAGTFKSVE 223
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
E+ ++H MHSE I +A+ +I+ VGTT R +E G
Sbjct: 224 CENLENHKMHSEFFDIPKKACEAI----DSQKKILGVGTTVTRTIEYYART----KQNQG 275
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
F ++F+ P D L++NFHLPKSTL+MLVSAF G + K+Y AI YRFYSYG
Sbjct: 276 FCDLFLHPHNPPLRQDYLLTNFHLPKSTLIMLVSAFIGRQNCLKLYDIAIKEKYRFYSYG 335
Query: 352 DTSLLF 357
D L+
Sbjct: 336 DAMLIL 341
>gi|288926585|ref|ZP_06420502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae D17]
gi|288336662|gb|EFC75031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae D17]
Length = 393
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 124/398 (31%), Positives = 185/398 (46%), Gaps = 48/398 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F L +IAL P V R+ +RLMV+H +
Sbjct: 1 MKLSQFKFKLSEEQIALYPHTAEHVITRKDGTQSTFHVTRREESRLMVLHKKSERIDMYK 60
Query: 43 DH----------------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEI 86
D+ + D +FN+TKV A+L G + + + +I
Sbjct: 61 TDETGEPLKDAEGRPQYIQFRDIVDYFGDGDTFIFNDTKVFPARLYGTK----EKTDAKI 116
Query: 87 SCTLHMRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF- 143
L ++ W V P++ I+ G+ L F D S + A VID + L F
Sbjct: 117 EVFLLRELNEEMRLWDVLVEPARKIRIGNKLFF---DDTSTMVAEVIDNTTSRGRTLRFL 173
Query: 144 -SISGIELERQISLVGTIPLPPYIARKR---PIDARDYVDYQTTYAKIQGSVAAPTAGLH 199
S E ++ + +G PLP YI +R D D+QT +AK +G+V AP GLH
Sbjct: 174 YDSSHDEFKQNLYALGESPLPRYIIDRRESHHATPEDMDDFQTVFAKNEGAVTAPATGLH 233
Query: 200 FTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVK 259
F+ LL R+ GI ++TLH G G F ++VED H M SE I A + +N K
Sbjct: 234 FSRELLKRMEIYGINFAYITLHCGLGNFHDIEVEDLTKHKMDSEQMKISAEACKVVNEAK 293
Query: 260 SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKST 319
G I +VGT+ ++ ETA DG++ + G+TN FI P Y F D +++NF+ P ST
Sbjct: 294 RAGNHICAVGTSVVKATETAVGTDGMLKEFDGWTNKFIFPPYDFGLADCMVANFYHPLST 353
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
LLM +AF G + + Y A + Y+F +GD+ L+
Sbjct: 354 LLMSTAAFGGYDMVMECYNRAAADGYKFGCFGDSLLIL 391
>gi|315606288|ref|ZP_07881304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae ATCC 33574]
gi|315251979|gb|EFU31952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae ATCC 33574]
Length = 393
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 123/398 (30%), Positives = 184/398 (46%), Gaps = 48/398 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F L +IAL P V R+ +RLMV+H +
Sbjct: 1 MKLSQFKFKLSEEQIALYPHTAEHVITRKDGTQSTFHVTRREESRLMVLHKKSERIDMYK 60
Query: 43 DH----------------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEI 86
D+ + D +FN+TKV A+L G + + + +I
Sbjct: 61 TDETGEPLKDAEGRPQYIQFRDIVDYFGDGDTFIFNDTKVFPARLYGTK----EKTDAKI 116
Query: 87 SCTLHMRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF- 143
L ++ W V P++ I+ G+ L F D S + A VID + L F
Sbjct: 117 EVFLLRELNEEMRLWDVLVEPARKIRIGNKLFF---DDTSTMVAEVIDNTTSRGRTLRFL 173
Query: 144 -SISGIELERQISLVGTIPLPPYIARKR---PIDARDYVDYQTTYAKIQGSVAAPTAGLH 199
E ++ + +G PLP YI +R D D+QT +AK +G+V AP GLH
Sbjct: 174 YDSPHDEFKQNLYALGESPLPRYIIDRRESHHATPEDMDDFQTVFAKNEGAVTAPATGLH 233
Query: 200 FTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVK 259
F+ LL R+ GI ++TLH G G F ++VED H M SE I A + +N K
Sbjct: 234 FSRELLKRMEIYGINFAYITLHCGLGNFHDIEVEDLTKHKMDSEQMKISAEACKVVNEAK 293
Query: 260 SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKST 319
G I +VGT+ ++ ETA DG++ + G+TN FI P Y F D +++NF+ P ST
Sbjct: 294 RAGNHICAVGTSVVKATETAVGTDGMLKEFDGWTNKFIFPPYDFGLADCMVANFYHPLST 353
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
LLM +AF G + + Y A + Y+F +GD+ L+
Sbjct: 354 LLMSTAAFGGYDMVMECYNRAAADGYKFGCFGDSLLIL 391
>gi|148238920|ref|YP_001224307.1| S-adenosylmethionine:tRNA-ribosyltransferase-isom erase
[Synechococcus sp. WH 7803]
gi|166218751|sp|A5GJ95|QUEA_SYNPW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|147847459|emb|CAK23010.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Synechococcus sp. WH 7803]
Length = 370
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 133/362 (36%), Positives = 195/362 (53%), Gaps = 12/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D++LP +RIA RPV PR +A+L++V P + L V D L S D +V
Sbjct: 7 LQLSAYDYELPEARIAQRPVEPRHAAKLLMVPPLEASSLQGRHGTVWDWQNELRSGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R W ARP K ++ GD + +
Sbjct: 67 VNDTRVLQARLRVRRSGGGLGELLV-----LEPRGEGRWLCLARPGKKLRPGDQVWLEAL 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDY 177
+ + +G ++ F + ++ +E + G +PLPPYI D D
Sbjct: 122 EQDPLPLQVLASDPASGGRIVQFPPAFVDAMAIEALLQRYGEVPLPPYITCH---DDSDQ 178
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + +LL + + G+++ VTLHVG GTF PV+ ED +
Sbjct: 179 ERYQTRYASRPGAVAAPTAGLHLSDDLLQAIRARGVQMSSVTLHVGLGTFRPVETEDLSE 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-NPWSGFTNIF 296
+HSE + +A+ + + RGGR+++VGTTS+R LE A G P G ++
Sbjct: 239 LSLHSEWVEVSTQLVEAVQACRQRGGRVIAVGTTSVRALEGAAAAGGGDLQPLKGPVDLV 298
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+FR VD L++NFHLPKS+LL+LVSA G E +Y AI++ YRFYSYGD +
Sbjct: 299 IQPGYQFRVVDGLLTNFHLPKSSLLLLVSALIGRERLLDLYALAIANDYRFYSYGDAMWI 358
Query: 357 FQ 358
Sbjct: 359 AP 360
>gi|224534863|ref|ZP_03675432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
spielmanii A14S]
gi|224513803|gb|EEF84128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
spielmanii A14S]
Length = 346
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 127/361 (35%), Positives = 191/361 (52%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ IV
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQE--IYHENSVNNILKYINSDTFIV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ + ++ + ++ + ++ SK G + F
Sbjct: 59 FNNSKVRKSRIYAE-----SELGSDVEFLILDKIDTDLFTALISKSKKQIVGSVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++ K + +L + G + G +P+PPYI R D D Y
Sbjct: 114 -----LIGKILSKNGSEIVLKFDNDVGED---YFEKHGFVPIPPYIK--RDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 QTIYSKYVGSAASATAGLHFSRDLFTFFEKNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L K G +I+S+GTT+LR LE++ ++ TN+FI P
Sbjct: 224 HFETFLIKDCVADRLEKAKFLGKKILSIGTTTLRALESSYDDELKKFKTGQQSTNLFIYP 283
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVSAF G + Y+ AI Y+F+SYGD L+
Sbjct: 284 GKNYCFKFVDMLFTNFHTPQSTLLMLVSAFAGKDFVFSSYEEAIKKGYKFFSYGDAMLVL 343
Query: 358 Q 358
Sbjct: 344 N 344
>gi|288803047|ref|ZP_06408483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
melaninogenica D18]
gi|288334564|gb|EFC73003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
melaninogenica D18]
Length = 394
Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats.
Identities = 120/400 (30%), Positives = 188/400 (47%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVI- 41
M + +F F+LP ++AL P V RD RLMV+H +
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSERVLTRTDGSTQTFTVTRRDEGRLMVLHRKSGKIDMFK 60
Query: 42 ---------SDH-LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEINGEPKEEDYIRFKDVFNYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPIDARDY---------VDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + + +Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELFTLGEAPLPRYIIDNRPKEEGEEFAHATADDMEHFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G G F ++VED H M SE I+A + N
Sbjct: 234 HFSEHMMKMMDIKGIKKAFITLHCGLGNFHDIEVEDLTKHKMDSEEMHINADACRIANGA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G R+ +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHRLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKNGYMFGCFGDSLLILN 393
>gi|261879604|ref|ZP_06006031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
gi|270333753|gb|EFA44539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
Length = 397
Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats.
Identities = 115/400 (28%), Positives = 185/400 (46%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F LP +AL P V RD +RLMV+H +
Sbjct: 1 MKLSQFKFKLPEELVALYPHSFMREFTNDDGTKGSIRVTRRDESRLMVLHRTTGEIEMYR 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+L + + +D + N+TKV A+L G + + + +I +
Sbjct: 61 KDAKGNPIEGEYLDFRNLLDYFDEHDTFILNDTKVFPARLYGTK----EKTDAKIEVFIL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE 149
++ + W V P++ I+ G+ L FF + G E + ++ S +
Sbjct: 117 RELNRETHLWDVLVEPARKIRIGNKL-FFDEVGTMVAEVYDNTTSRGRSLRFLYDCSHEQ 175
Query: 150 LERQISLVGTIPLPPYIARKRPIDAR-------------DYVDYQTTYAKIQGSVAAPTA 196
+ +G +PLP YI RP D +Q YAK +G+V AP
Sbjct: 176 FREDLFALGEMPLPTYILNGRPEHPEMKGMHVRSRALPEDSEYFQCVYAKNEGAVTAPAT 235
Query: 197 GLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALN 256
GLHF+ L+ R+ GI F+TLH G G F P++VED H M SE I +N
Sbjct: 236 GLHFSRELMKRMEIKGIHTAFITLHCGLGNFTPIEVEDLTKHKMDSEQMIITKKACDIVN 295
Query: 257 SVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLP 316
+ G R+ ++GT+ L+ ETA DG++ ++G+T+ FI P Y F D +++NF+ P
Sbjct: 296 RTRKEGHRLCAIGTSVLKATETAVGTDGMLKEYNGWTSKFIFPKYDFGLADSMVANFYHP 355
Query: 317 KSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ST++M +AF G E+ + Y A+ H Y+F +GD+ L+
Sbjct: 356 ESTMVMATAAFGGYEKVMECYDLAVKHGYKFGCFGDSLLI 395
>gi|193214235|ref|YP_001995434.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
gi|193087712|gb|ACF12987.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
Length = 339
Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats.
Identities = 125/360 (34%), Positives = 179/360 (49%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP +IA P R + +L+ ++ + L L AFL D +V
Sbjct: 1 MNVSDFDYTLPDEQIAKYPPKERGTTKLLALNRKTG---EVQHSLYRSLDAFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L + + L + IK G+ L
Sbjct: 58 LNNTKVIKARLQANKPTGAS-------VELLLLEKHEGPQQIVMYGGKIKAGNTLLVGED 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E V + G + + + L + G +P+PPY+ R + D + Y
Sbjct: 111 ------EVLVEEILGNGLAKV---SAAVPLLSLVEKYGNVPIPPYLN--RKAEKSDEMRY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK QGSVAAPTA L+FT +L +L G+++ F+TLHVG GTFMP++ E H M
Sbjct: 160 QTVFAKEQGSVAAPTASLNFTESLEKKLKEKGVQLAFLTLHVGLGTFMPIRTETLSAHEM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS--GFTNIFIT 298
H E I TA A+ K+ R+V++GTT R +E A+ P G +IFI
Sbjct: 220 HREFYHISHETAAAIRLAKAEKRRVVALGTTVTRAIEHASARLLAHEPAELAGEADIFIY 279
Query: 299 PG-YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG Y F+ VD L++NFH P+ST+LML +AF G K Y+ A+ + Y F SYGD+ +F
Sbjct: 280 PGGYEFQIVDALLTNFHAPRSTVLMLAAAFAGAAHLKAAYEAALQNDYHFLSYGDSMFIF 339
>gi|302345240|ref|YP_003813593.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
gi|302149702|gb|ADK95964.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
Length = 394
Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats.
Identities = 120/400 (30%), Positives = 188/400 (47%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVI- 41
M + +F F+LP ++AL P V RD RLMV+H +
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSERVLTRTDGSTQTFTVTRRDEGRLMVLHRKSGKIDMFK 60
Query: 42 ---------SDH-LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEINGEPKEEDYIRFKDVFNYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPIDARDY---------VDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + + +Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELFALGEAPLPRYIIDNRPKEDGEEFAHATADDMEHFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G G F ++VED H M SE I+A + N
Sbjct: 234 HFSEHMMKMMDIKGIKKAFITLHCGLGNFHDIEVEDLTKHKMDSEEMHINADACRIANGA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G R+ +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHRLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKNGYMFGCFGDSLLILN 393
>gi|305431668|ref|ZP_07400837.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli JV20]
gi|304445263|gb|EFM37907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli JV20]
Length = 341
Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats.
Identities = 128/366 (34%), Positives = 183/366 (50%), Gaps = 34/366 (9%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M + +D+ LP IA PV P++ A+L+V IS +L FL +
Sbjct: 1 MKDLLLSSYDYTLPNELIATYPVHPKEDAKLLVFEQKN---NQISHTTFKNLQDFL-PDC 56
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSW-SVYARPSKVIKKGDILH 116
A+ FN+TKVI A++ G + +I LH + A+ +KK +IL
Sbjct: 57 ALFFNDTKVIKARIYGNKSS-----GGKIELFLHQPCLDSQDSLFLAQIKGRVKKDEILS 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRP 171
F + L+A VI+ + G + F + L +G +PLPPYI R
Sbjct: 112 F-----EQNLKAKVIELLDDGLRKVQFFQNDEVLNTFKLYELLDTIGHVPLPPYIK--RS 164
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D DYQ+ +AK G+VAAPTA LHF+ N+L L ++Y +TLHVGAGTF V+
Sbjct: 165 DEKSDLEDYQSIFAKNLGAVAAPTASLHFSENMLENL-KKRHEIYHLTLHVGAGTFKSVE 223
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
E+ ++H +HSE I + + +I+ VGTT R +E G
Sbjct: 224 CENLENHKIHSEFFDIPKKACEVI----DSQKKILGVGTTVTRTIEYYART----KQNQG 275
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
F ++F+ P D L++NFHLPKSTL+MLVSAF G + K+Y AI YRFYSYG
Sbjct: 276 FCDLFLHPHNPPLRQDYLLTNFHLPKSTLIMLVSAFIGRQNCLKLYDIAIKEKYRFYSYG 335
Query: 352 DTSLLF 357
D L+
Sbjct: 336 DAMLIL 341
>gi|206603316|gb|EDZ39796.1| Putative queuosine biosynthesis protein [Leptospirillum sp. Group
II '5-way CG']
Length = 385
Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats.
Identities = 114/357 (31%), Positives = 171/357 (47%), Gaps = 18/357 (5%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
E+D+DLP RI L P R +RL+V P + D FL D +V N+
Sbjct: 39 DEYDYDLPEDRIRLYPPPTRGESRLLVAGRESGVPYF---GTMEDFSRFLFPGDLLVLND 95
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++V+ A++ ++I P+ + G G
Sbjct: 96 SRVLPARVF-----LRAPTGRKIELLFLNPQDPSPVRFLGKG-----IGSSSTLSLPGGG 145
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
+ + K + + L + G +PLPPYI + R D YQT
Sbjct: 146 KVRDILYLPKEGCFQGI---YEGEEGLLSWLESHGEMPLPPYIRKARDHHPSDRDRYQTV 202
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+++ GSVAAPTAGLHFT LL +L G++ VTLHVG GTF P+ D H+MH+E
Sbjct: 203 FSRHPGSVAAPTAGLHFTETLLEKLKDKGVETATVTLHVGIGTFRPLGPGGIDQHVMHAE 262
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ T+Q + + RG R+ +VGTT +R LET + + +T +FI PG+ F
Sbjct: 263 RFLVPEETSQKIEDARRRGNRVFAVGTTVMRTLET-WGQHPVRAAVPTWTRLFIRPGFPF 321
Query: 304 RAVDILMSNFHLPKSTLLMLVSAF-CGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R VD L++NFH P+STL++LV +F G + +Y+ A+ + F SYGD L+ +
Sbjct: 322 RVVDGLLTNFHQPRSTLVVLVDSFLGGRGRWRSLYRQALEEGFMFLSYGDAMLIVPE 378
>gi|219684851|ref|ZP_03539793.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii PBr]
gi|219671796|gb|EED28851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii PBr]
Length = 346
Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats.
Identities = 128/361 (35%), Positives = 189/361 (52%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ + I + R+ + ++ SK G++ F
Sbjct: 59 FNNSKVRKSRMYAE-----SEMGNNIEFLILDRIGTDLFTALISKSKKQIVGNVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L + +L F + E G +P+PPYI R D D Y
Sbjct: 114 LMGEILSKNNSEI------VLKFDNNVDE--DYFEKHGFVPIPPYIK--RDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 QTVYSKYVGSAASATAGLHFSRDLFSAFEKNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I+ A L + K G +I+S+GTT+LR LE++ TN+FI P
Sbjct: 224 HFETFLIENSVAARLENAKFLGKKILSIGTTTLRALESSYDNKLKKFKTGQQSTNLFIYP 283
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 284 GKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFFSYGDAMLVL 343
Query: 358 Q 358
Sbjct: 344 N 344
>gi|261415143|ref|YP_003248826.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261371599|gb|ACX74344.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302327078|gb|ADL26279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 348
Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 121/360 (33%), Positives = 173/360 (48%), Gaps = 19/360 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSAR----LMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
+ +++F+ P IA R + + ++ N ++ ++ D
Sbjct: 4 HLSDYNFEFPKELIAS-----RTAGKGKTHILYCPKNGGERRIMKA---PEIVDLFRPGD 55
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V NNTKVI A+L G + + P K + G L
Sbjct: 56 CLVVNNTKVIPARLYGETQFGGQVEVLLVQALNPSEAGEARFEAKVHPGKAFQVGRELKL 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G +L F + E+E ++ G +PLPPYI RP D D
Sbjct: 116 AGVR-----TFVEEVHEEDGNRVLRFEKTPAEMEEVMNKEGHVPLPPYI--DRPDDEDDK 168
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +AK G+VAAPTA LHF+ +L L + G+ V VTLHVG GTF + VED
Sbjct: 169 KAYQTIFAKYAGAVAAPTASLHFSEQMLEDLKAKGVYVAEVTLHVGPGTFQNISVEDFTQ 228
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A +N K GGRIV+VGTTS R++ET +G + P G T F
Sbjct: 229 HKMHGEHYELTKENADIINKAKREGGRIVTVGTTSTRVIETVADANGFLKPQKGVTYAFF 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ VD L++NFH PKS+L++LVSAF G E T Y+ A+ + + +SYGD L+
Sbjct: 289 YPGYKYKIVDGLLTNFHWPKSSLILLVSAFYGRENTLDAYKMAVENKLKLFSYGDGMLIL 348
>gi|94987231|ref|YP_595164.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine
synthetase) [Lawsonia intracellularis PHE/MN1-00]
gi|94731480|emb|CAJ54843.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lawsonia intracellularis PHE/MN1-00]
Length = 366
Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 131/375 (34%), Positives = 186/375 (49%), Gaps = 37/375 (9%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + F LP ++IA P R +RL+V+ I S + +L +N ++
Sbjct: 10 LLSSYMFSLPKTQIAQYPYE-RGKSRLLVL---TKKNSTIIHTDFSKIEHYLPNNSLLIA 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVS------------PNSW-----SVYAR 104
NN++V A++ + ++ I L +S +W R
Sbjct: 66 NNSRVFPARIF------CSYDKRNIEVFLLTPISFLEIQAKSSDEHYGAWSTAIGECLIR 119
Query: 105 PSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPP 164
P+K + G L+ Q LE V+ K + G ++ G L G IP PP
Sbjct: 120 PAKRVNIGSKLYL-----QQELEIEVLKKEDFGRHIVKLCWKG-SLSNIFFSYGDIPHPP 173
Query: 165 YIARKRPIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
YI + + YQT Y++ GSVAAPTAGLHF+ + ++L GI +TLHV
Sbjct: 174 YIHQSNKVQD--KERYQTVYSRLDKLGSVAAPTAGLHFSETIRNKLQKNGISWAEITLHV 231
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
G GTF PV+ D HIMHSE + T QA+ + G I ++GTT +R LE +T
Sbjct: 232 GYGTFSPVRCNDIRKHIMHSEFVEVPETTVQAIKKARFEGRPIFAIGTTVVRALEGVSTI 291
Query: 283 DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
G + P++GF NIFI+PGY+F VD L++NFHLP STLLMLVSAF Y AI
Sbjct: 292 CGSLQPYTGFINIFISPGYKFSYVDGLVTNFHLPGSTLLMLVSAFTKRSIMINTYNKAIE 351
Query: 343 HAYRFYSYGDTSLLF 357
YRF+SYGD L+
Sbjct: 352 LGYRFFSYGDAMLII 366
>gi|254457318|ref|ZP_05070746.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacterales bacterium GD 1]
gi|207086110|gb|EDZ63394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacterales bacterium GD 1]
Length = 342
Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 126/362 (34%), Positives = 187/362 (51%), Gaps = 30/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +DF LP IA P PRD A+L+V + I D ++ + A++
Sbjct: 6 LLTSSYDFILPDELIATHPASPRDHAKLLVYNRRT---NEIKHCHFYDFEKYIPKDCALI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + +I ++ + N+ +VY R +K + F
Sbjct: 63 FNDTKVIKARLYGHKLS-----GGKIELLINKPLDANNINVYIR--GKVKDETKILF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG-----IELERQISLVGTIPLPPYIARKRPIDAR 175
LEA V+ + G ++ F ++ I +G IPLPPYI R +A
Sbjct: 113 --DEDLEAVVLKLNDDGSRVVNFFQKNKLLRFEDILPIIDRIGHIPLPPYIQ--REDNAE 168
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +YQ+ +A+ +G+VAAPTA LHFT R+ F+TLHVG+GTF PV+ +
Sbjct: 169 DASEYQSVFARQEGAVAAPTASLHFTEEQHERVC-KNHDHAFITLHVGSGTFKPVEAQTI 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MHSE I + L I+S+GTTS R +E G N+
Sbjct: 228 TDHPMHSEYYEISNKAKELL----DSDKPILSIGTTSTRTVEFYAR---HKEMQRGEANL 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + V+ L++NFHLPKSTLLMLV++F G+E+ +++Y +AI + YRFYSYGD L
Sbjct: 281 FLHPNNKPIRVNYLLTNFHLPKSTLLMLVASFVGVEKAQQLYANAIKNNYRFYSYGDAML 340
Query: 356 LF 357
+
Sbjct: 341 IL 342
>gi|148242891|ref|YP_001228048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. RCC307]
gi|166218752|sp|A5GUY6|QUEA_SYNR3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|147851201|emb|CAK28695.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Synechococcus sp. RCC307]
Length = 363
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 138/362 (38%), Positives = 198/362 (54%), Gaps = 16/362 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++LP + IA RP+ PR +ARL++V P C D V DL L D +V
Sbjct: 9 LLSSYDYELPEACIAQRPLEPRHAARLLMVEPEAGC----RDRQVWDLLEELEPGDLLVV 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L R W ARP+K ++ GD + +
Sbjct: 65 NDTRVLRARLQVRRAGGGLGELLV-----LQPQGQGQWLCLARPAKRLRPGDSIALVADG 119
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + ++G L+ F ++ LE + G +PLPPYI ++ D D
Sbjct: 120 EPDLPLQVLAVEESSGGRLIQFPPECVDAASLEPLLLRYGVMPLPPYIHQQ---DESDNA 176
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A G+VAAPTAGLH + LL+ L GI+ VTLHVG GTF PV+ ED
Sbjct: 177 RYQTCFASKPGAVAAPTAGLHLSEELLAALTQKGIERASVTLHVGLGTFRPVETEDLSQL 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFI 297
+HSE + QA+ + + RGGR+++VGTTS+R LE A G++ P+ G N+ I
Sbjct: 237 ELHSEWVEVSEALVQAVAACRKRGGRVIAVGTTSVRSLEGVAALHGGVLQPFRGPVNLVI 296
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+RF V L++NFHLPKS+LL+LVSA G E ++YQHAI+ YRFYSYGD +
Sbjct: 297 QPGFRFAVVQGLLTNFHLPKSSLLLLVSALIGRERLLQLYQHAITAGYRFYSYGDAMWIP 356
Query: 358 QK 359
+
Sbjct: 357 PE 358
>gi|154175322|ref|YP_001408005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter curvus 525.92]
gi|112803352|gb|EAU00696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter curvus 525.92]
Length = 343
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 124/360 (34%), Positives = 185/360 (51%), Gaps = 31/360 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+DLP IA PV P++ ARL+V I DL + + A+VFN
Sbjct: 10 ISSYDYDLPKELIANEPVLPKEQARLLVYFRQTGN---IEHLKFKDLCELIPGDTAVVFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + L+ + +S Y + + G IL F
Sbjct: 67 DTKVIKARILGHKRS-----GGACEVMLNQPLGDAKFSCYVK--GRVSAGKILEFADG-- 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDARDY 177
+ A +++ + G ++ FS +G+ L+ + +G IPLPPYI R D
Sbjct: 118 ---VSAEILELNSDGTRIVEFSKNGVSLDTAMLFKELEKIGHIPLPPYIK--RADTKEDE 172
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +A G+VAAPTA LHF+ ++L R+ + ++TLHVGAGTF V+ ED
Sbjct: 173 SWYQSVFAAHSGAVAAPTASLHFSEDMLKRIKAKHES-AYLTLHVGAGTFKGVECEDIRS 231
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MHSE I T + +N +I+ VGTT R +E SGF +F+
Sbjct: 232 HVMHSEFYEIPQDTQELIN----SDKKILGVGTTVTRCVEEFARS----KNASGFCKLFL 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ L++NFHLPKSTL+MLV++F G++ET ++Y+ AI YRFYSYGD L+
Sbjct: 284 NLNNPPIRQNYLLTNFHLPKSTLIMLVTSFIGLDETMRIYKAAIEEKYRFYSYGDGMLVL 343
>gi|318042183|ref|ZP_07974139.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CB0101]
Length = 372
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 131/362 (36%), Positives = 193/362 (53%), Gaps = 14/362 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + FDLP + IA PV PR +ARL+VV P P DL L D +V
Sbjct: 9 RLSSYVFDLPETFIAQSPVEPRHAARLLVVDP--GQPSGCRHRTAWDLQDELKPGDLLVV 66
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L R + + + W ARP+K +K G++L
Sbjct: 67 NNTRVLKARLQARRPS-----GGSVELLVLEPAGESDWLCLARPAKRLKPGELLQLEHHG 121
Query: 122 GQSR-LEATVIDKWNTGEILLVFSIS--GIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ LE ID+ G ++ +E ++ G++PLPPYI ++ D
Sbjct: 122 QPAIGLEIVAIDEETGGRVVRFPEECTSPEAIETLLARYGSMPLPPYIQQQNDDDD---T 178
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + L++ + + G+++ VTLHVG GTF PV+ ED +
Sbjct: 179 RYQTRYASRPGAVAAPTAGLHLSDELIAAIRARGVEMAEVTLHVGLGTFRPVETEDLNQL 238
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
+HSE + +A+ + ++RGGR+++VGTTS+R LE G + +G N+ I
Sbjct: 239 ELHSEWVEVSPVLVEAVAACRARGGRVIAVGTTSVRSLEAVAQLHGGTLQSHAGPVNLVI 298
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF V L++NFHLPKS+LL+LVSA G +Y+ A + YRF+SYGD +
Sbjct: 299 QPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGRTRLLDLYEQAKAEGYRFFSYGDAMWIA 358
Query: 358 QK 359
+
Sbjct: 359 PE 360
>gi|226329117|ref|ZP_03804635.1| hypothetical protein PROPEN_03020 [Proteus penneri ATCC 35198]
gi|225202303|gb|EEG84657.1| hypothetical protein PROPEN_03020 [Proteus penneri ATCC 35198]
Length = 307
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 117/300 (39%), Positives = 176/300 (58%), Gaps = 14/300 (4%)
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K+G L
Sbjct: 8 FNNTRVIPARIYGRKAS-----GGKIEVLVERMLDEHRVLAHVRASKSPKEGAALVLGED 62
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 63 ES---VQATMVAR--HDTLFEIRFDDERDVLTILNSIGHMPLPPYI--DRPDEESDKELY 115
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V++ ++H M
Sbjct: 116 QTVYNERPGAVAAPTAGLHFDEPLLQALKEKGVEMAFVTLHVGAGTFQPVRVDNIEEHTM 175
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A T D +I P+ T IFI
Sbjct: 176 HSEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAKATNDALIAPFFDDTQIFIY 235
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ +D L++NFHLP+STL+MLVSAF G T Y+ A+ YRF+SYGD + +
Sbjct: 236 PGYQYQVIDALITNFHLPESTLIMLVSAFAGYRNTMNAYKEAVEQEYRFFSYGDAMFITR 295
>gi|51598284|ref|YP_072472.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
garinii PBi]
gi|81610282|sp|Q662Z1|QUEA_BORGA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51572855|gb|AAU06880.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
garinii PBi]
Length = 346
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 128/361 (35%), Positives = 189/361 (52%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ + I + R+ + ++ SK G++ F
Sbjct: 59 FNNSKVRKSRMYAE-----SELGNNIEFLILDRIGTDLFTALISKSKKQIVGNVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L + +L F + E G +P+PPYI R D D Y
Sbjct: 114 LMGEILSKNNSEI------VLKFDNNVDE--DYFEKHGFVPIPPYIK--RDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 QTVYSKYVGSAASATAGLHFSRDLFSTFEKNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I+ A L + K G +I+S+GTT+LR LE++ TN+FI P
Sbjct: 224 HFETFLIEDCVATRLENAKFLGKKILSIGTTTLRALESSYDNKLKKFKTGQQSTNLFIYP 283
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 284 GKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFFSYGDAMLVL 343
Query: 358 Q 358
Sbjct: 344 N 344
>gi|119952827|ref|YP_945036.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Borrelia turicatae 91E135]
gi|119861598|gb|AAX17366.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Borrelia turicatae 91E135]
Length = 345
Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats.
Identities = 127/360 (35%), Positives = 188/360 (52%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R +RLMV+ + + ++D+ ++NSN +V
Sbjct: 1 MDTKEFYFDLPCKLIAQYPSEKRGLSRLMVLD--SGNQKIYHNDSINDIFKYINSNTFLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++V +++ I + R++ + ++ +K G + F
Sbjct: 59 FNDSRVRKSRIYAK-----TEHGGSIEFLILDRLAGDEFTSLISKAKKQNIGKVYMFPQG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A +I K + E ++ F+ E G IPLPPYI R D D Y
Sbjct: 114 -----LLAQIISKTDN-EFIIKFNKCVSE--SYFEQHGLIPLPPYIK--RNYDRADEERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
+T Y+K GS A+ TAGLHF+ L S+L I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 RTIYSKYIGSSASATAGLHFSEELFSKLDENNIEYDFITLHVGLGTFLPVRTKTIEEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP- 299
H E I A L K+ G +I+++GTT+LR LE+A + TN+FI P
Sbjct: 224 HFESFSIKNSVALRLEESKALGKKILAIGTTTLRALESAYDKQKGFVRGEQKTNLFIYPG 283
Query: 300 -GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY F+ VD+L +NFH P+STLLMLVS+F G + Y+ A+ Y+F+SYGD +L
Sbjct: 284 KGYEFKFVDMLFTNFHTPESTLLMLVSSFGGKDFVFSAYREAVKMNYKFFSYGDATLFLN 343
>gi|124516476|gb|EAY57984.1| putative queuosine biosynthesis protein [Leptospirillum rubarum]
Length = 385
Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats.
Identities = 114/357 (31%), Positives = 167/357 (46%), Gaps = 18/357 (5%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
E+D+DLP RI L P R +RL+VV + P + S FL D +V N+
Sbjct: 39 DEYDYDLPEDRIRLFPPKNRGESRLLVVGRDSGGPYFGTMEEFS---RFLFPGDLLVLND 95
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++V+ A++ ++I P+ + G G
Sbjct: 96 SRVLPARVF-----IRAPTGRKIELLFLNPQDPSPVRFLGKG-----IGSSSTLSLPGGG 145
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
I L + G +PLPPYI + R D YQT
Sbjct: 146 ---RVRDIRYLPEEGCFQGVYEGEETLLSWLESHGEMPLPPYIRKARDHHPSDRERYQTV 202
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+++ GSVAAPTAGLHFT LL L G++ VTLHVG GTF P+ H+MH+E
Sbjct: 203 FSRHAGSVAAPTAGLHFTEALLEHLKDKGVETATVTLHVGIGTFRPLGPGGVGQHVMHAE 262
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ T Q + + RG R+ +VGTT +R LET + + + +T +FI PG+ F
Sbjct: 263 RFLVPDETVQKIEDARRRGSRVFAVGTTVMRTLET-WGQHPVRDAVPAWTRLFIRPGFPF 321
Query: 304 RAVDILMSNFHLPKSTLLMLVSAF-CGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R VD L++NFH P+STL++LV +F G + +Y+ A+ + F SYGD L+ +
Sbjct: 322 RVVDGLLTNFHQPRSTLVVLVDSFLGGNGRWRSLYRQALEEGFMFLSYGDAMLIVPE 378
>gi|24217263|ref|NP_714746.1| queuosine biosynthesis protein [Leptospira interrogans serovar Lai
str. 56601]
gi|24202323|gb|AAN51761.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leptospira
interrogans serovar Lai str. 56601]
Length = 352
Score = 310 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 129/356 (36%), Positives = 185/356 (51%), Gaps = 16/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+KEF+F L RIA PV RD +RLMV+ N S+ ++ ++L D +V N
Sbjct: 6 LKEFEFILSEERIARYPVANRDESRLMVLDVNTGTIS--SEPSFKNVISYLKEGDLLVAN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV ++ ++ + I + + + W R SK +K G+ L D
Sbjct: 64 HTKVSKRRVY-----LRSKTKARIHEAMFLEEKESLWKCKIRNSKKLKMGEQLC----DE 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+++ I++ + L S E +G IP+PPY+ R D+ D + YQT
Sbjct: 115 KTKQILFTIERKEEEFVFLKPKHSLQE--EDFQQIGEIPIPPYLK--RNADSEDEIRYQT 170
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK GSVAAPTAGLHF+ N+ L I+ + L VG GTF P+ E+ + +H
Sbjct: 171 LFAKTPGSVAAPTAGLHFSENIFKTLKEKKIQFCTLELKVGYGTFQPLTEENFQNQKLHK 230
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E F++ +AQ LN K RI S+GTT+LR LE+A G T +FI P
Sbjct: 231 EEFFLEESSAQMLNLAKKERRRIFSIGTTTLRALESAYDPVTNTFCSGPGVTELFILPEN 290
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R ++ L++NFHLP S+LL+LVSAF G E K YQ AI +RFYSYGD L+
Sbjct: 291 RLQSCQGLITNFHLPGSSLLLLVSAFAGKELILKAYQKAIQEKFRFYSYGDAMLIL 346
>gi|33239854|ref|NP_874796.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|46576945|sp|Q7VDH4|QUEA_PROMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33237380|gb|AAP99448.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 370
Score = 310 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 130/362 (35%), Positives = 190/362 (52%), Gaps = 12/362 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++L S IA P+ PR +AR++ V L V DL A L + D +V
Sbjct: 9 LLSSYDYELNSSLIAQEPIEPRHNARMLHVSKRSGEGLKAFHLKVWDLLAELRAGDLLVM 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L R + L W A+P+K ++ GD + S
Sbjct: 69 NDTRVLKARLK-----VRLRNGTFVELFLLEPKGQGRWLCLAKPAKKLRAGDCIWMESSG 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDYV 178
+S + +TG ++ F + +E + G IPLPPYI R D
Sbjct: 124 EESIPLKIIDQDISTGGRIVQFPELFSDRRKIEPLLEKFGEIPLPPYINRCDFKDV---N 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + L L GIK VTLHVG GTF P+ E+ +
Sbjct: 181 RYQTRYASTPGAVAAPTAGLHLSDQFLEALSQQGIKDAKVTLHVGLGTFRPLVEENLANL 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+HSE + A+ + RGGR++++GTT++R LE + DG + P+ G ++ I
Sbjct: 241 HLHSEWVEVKEEVVSAIKECRDRGGRVIAIGTTTVRSLEASFLAGDGCLKPFKGEVDLVI 300
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F VD L++NFHLPKS+LL+LVSA G E ++Y+ AI YRF+SYGD +
Sbjct: 301 KPGYKFGIVDGLLTNFHLPKSSLLLLVSALIGRENLLELYKEAIDQKYRFFSYGDAMFIS 360
Query: 358 QK 359
+
Sbjct: 361 PE 362
>gi|254672411|emb|CBA05734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha275]
Length = 312
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 127/313 (40%), Positives = 176/313 (56%), Gaps = 18/313 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYIE--RAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNF 313
YRF VD L++NF
Sbjct: 293 YRFNVVDRLVTNF 305
>gi|45655741|ref|YP_003550.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45602712|gb|AAS72187.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 352
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 129/356 (36%), Positives = 185/356 (51%), Gaps = 16/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+KEF+F L RIA PV RD +RLMV+ N S+ ++ ++L D +V N
Sbjct: 6 LKEFEFILSEERIARYPVANRDESRLMVLDVNTGTIS--SEPSFKNVISYLKEGDLLVAN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV ++ ++ + I + + + W R SK +K G+ L D
Sbjct: 64 HTKVSKRRVY-----LRSKTKARIHEAMFLEEKESLWKCKIRNSKKLKMGEQLC----DE 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+++ I++ + L S E +G IP+PPY+ R D+ D + YQT
Sbjct: 115 KTKQILFTIERKEEEFVFLKPKHSLQE--EDFQQIGEIPIPPYLK--RNADSEDEIRYQT 170
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK GSVAAPTAGLHF+ N+ L I+ + L VG GTF P+ E+ + +H
Sbjct: 171 LFAKTPGSVAAPTAGLHFSENIFKTLKEKKIQFCTLELKVGYGTFQPLTEENFQNQKLHR 230
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E F++ +AQ LN K RI S+GTT+LR LE+A G T +FI P
Sbjct: 231 EDFFLEESSAQMLNLAKKERRRIFSIGTTTLRALESAYDPVTNTFCSGPGVTELFILPEN 290
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R ++ L++NFHLP S+LL+LVSAF G E K YQ AI +RFYSYGD L+
Sbjct: 291 RLQSCQGLITNFHLPGSSLLLLVSAFAGKELILKAYQKAIQEKFRFYSYGDAMLIL 346
>gi|242309356|ref|ZP_04808511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pullorum MIT 98-5489]
gi|239523927|gb|EEQ63793.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pullorum MIT 98-5489]
Length = 347
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 116/356 (32%), Positives = 176/356 (49%), Gaps = 19/356 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+D++LP IA +P+ P++ A+L+V + I D FL +VFN+T
Sbjct: 8 SYDYELPKELIATQPITPKEDAKLLVYNRK---DRSIIHSTFRDFMQFLPKETLLVFNDT 64
Query: 65 KVITAQLNGVR-FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
KVI A++ GV+ F + + +I H + N + + R +K+G + F
Sbjct: 65 KVIPARIYGVKIFQNTQQEGGKIEALFHKEIGENLYLMQFR--GRLKEGSRVKFEGGIFA 122
Query: 124 SRLEATVIDKWNTGEILL--VFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++ + + + E + G PLPPYI R +D +Y
Sbjct: 123 KIIKDCGMGFKEASFFRIDDESPLDKQEFFGFLDSCGHTPLPPYIK--REASQQDREEYN 180
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
+ +AK G++AAPTA LHF+ +L FVTLHVGAGTF+ V VE+ +H MH
Sbjct: 181 SVFAKNLGAIAAPTASLHFSQESFQQLQ-REFNNAFVTLHVGAGTFLGVSVENILEHKMH 239
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I + Q + I ++GTT+ R +E G ++F+
Sbjct: 240 KESFIIPQESIQKIQEATH----ITAIGTTAARTIEYFART----KQAQGECDLFLHLQN 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ D L++NFHLPK+TLLMLV++F G+EETK++YQ AI YRFYSYGD L+
Sbjct: 292 KPILTDALLTNFHLPKTTLLMLVASFVGLEETKRIYQEAIKKKYRFYSYGDGMLVL 347
>gi|325269367|ref|ZP_08135984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
multiformis DSM 16608]
gi|324988288|gb|EGC20254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
multiformis DSM 16608]
Length = 394
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 121/399 (30%), Positives = 187/399 (46%), Gaps = 49/399 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+LP ++AL P V RD RLM++H +
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSDRVLTRSDGSTQTFTVTRRDEGRLMILHRKSGRIDMFK 60
Query: 43 DH-----------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GDVKGEPKEEDFIRFKDVLDYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPID---------ARDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + A D ++Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELYALGEAPLPRYIIDNRPKEKGAEFAHASADDMENFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ ++ + GIK F+TLH G GTF ++VED H M SE I+A + N
Sbjct: 234 HFSEQMMKMMDIRGIKKAFITLHCGLGTFHDIEVEDLTKHKMDSEEMHINADACRIANGA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G + +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHHLCAVGASVVKATETAVGTDGMMKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TLLM +AF G E + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYELVMEAYDKAVKNGYMFGCFGDSLLIL 392
>gi|325854969|ref|ZP_08171685.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
gi|327313347|ref|YP_004328784.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
gi|325483947|gb|EGC86887.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
gi|326946042|gb|AEA21927.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
Length = 394
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 121/400 (30%), Positives = 189/400 (47%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSC----- 37
M + +F F+LP ++AL P V RD RLMV+H
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSDRVLTRSDGSTQTFTVTRRDEGRLMVLHRTSGKIDMFK 60
Query: 38 ------PLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
P D+ ++ + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEVKGEPKETDFIRFKDVLSYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVF--SISG 147
+ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPIDARDY---------VDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + + ++Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELYALGEAPLPRYIIDNRPKEKGEEFAHATADDMENFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G GTF ++VED H M SE I+A + NS
Sbjct: 234 HFSEHMMKMMDIRGIKKAFITLHCGLGTFHDIEVEDLTKHKMDSEEMHINADACRIANSA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G + +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHHLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKNGYMFGCFGDSLLILN 393
>gi|283955989|ref|ZP_06373478.1| LOW QUALITY PROTEIN: S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Campylobacter jejuni
subsp. jejuni 1336]
gi|283792465|gb|EFC31245.1| LOW QUALITY PROTEIN: S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Campylobacter jejuni
subsp. jejuni 1336]
Length = 342
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 125/363 (34%), Positives = 180/363 (49%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPANPKEDARLLVFDRKN---KEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFRE 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDA 174
L+ V++ + G + F + L+ +G IPLPPYI R +
Sbjct: 116 D-----LKVRVVELLDDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYIK--REDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIY-HLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MHSE I + + I+ VGTT R +E +GF +
Sbjct: 228 IQKHKMHSEFFNIPQQACEII----DSKQAILGVGTTVTRTIEYYART----KTKNGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|86151533|ref|ZP_01069747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 260.94]
gi|86153214|ref|ZP_01071418.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni HB93-13]
gi|121612914|ref|YP_001000278.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81-176]
gi|167005231|ref|ZP_02270989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81-176]
gi|315124097|ref|YP_004066101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|229598024|sp|A1VYT7|QUEA_CAMJJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85841162|gb|EAQ58410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 260.94]
gi|85842940|gb|EAQ60151.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni HB93-13]
gi|87250015|gb|EAQ72973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81-176]
gi|315017819|gb|ADT65912.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni ICDCCJ07001]
Length = 342
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 125/363 (34%), Positives = 181/363 (49%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL + AI
Sbjct: 5 LLLSSYDYTLANELIANYPANPKEDARLLVFDRKN---KEIFHTTFKNLKDFL-PDCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFKE 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDA 174
L+A V++ + G + F + L+ +G IPLPPYI R +
Sbjct: 116 D-----LKARVVELLDDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYIK--REDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ + L +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMFENLRKKHKIY-HLTLHVGAGTFKGVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + + I+ VGTT R +E SGF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEII----DSKQAILGVGTTVTRTIEYYART----KTKSGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYKLAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|111114843|ref|YP_709461.1| S-adenosylmethionine: tRNA ribosyltransferase- isomerase [Borrelia
afzelii PKo]
gi|216264010|ref|ZP_03436004.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia afzelii ACA-1]
gi|123145808|sp|Q0SPE3|QUEA_BORAP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110890117|gb|ABH01285.1| S-adenosylmethionine: tRNA ribosyltransferase- isomerase [Borrelia
afzelii PKo]
gi|215980054|gb|EEC20876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia afzelii ACA-1]
Length = 346
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 124/361 (34%), Positives = 183/361 (50%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ IV
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFIV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ + + + R+ + ++ SK G++ F
Sbjct: 59 FNNSKVRKSRMYAE-----SEMGSNVEFLILDRIGTDLFTALISKSKKQIVGNVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L + + G +P+PPYI R D D Y
Sbjct: 114 LMGKILSKNSSEIVLKFNDDVREDY--------FEKHGFVPIPPYIK--RDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 QTIYSKYVGSAASATAGLHFSRDLFSAFEKNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G +++S+GTT+LR LE++ TN+FI P
Sbjct: 224 HFETFLIKDCVANRLENAKFLGKKVLSIGTTTLRALESSYDNKLKKFKTGQQSTNLFIYP 283
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVSAF G + Y+ I+ Y+F+SYGD L+
Sbjct: 284 GKNYCFKFVDMLFTNFHTPQSTLLMLVSAFAGKDFVFSSYEEGINKGYKFFSYGDAMLVL 343
Query: 358 Q 358
Sbjct: 344 N 344
>gi|83815574|ref|YP_445772.1| queuosine biosynthesis protein [Salinibacter ruber DSM 13855]
gi|294507669|ref|YP_003571727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salinibacter ruber M8]
gi|83756968|gb|ABC45081.1| Queuosine biosynthesis protein [Salinibacter ruber DSM 13855]
gi|294343997|emb|CBH24775.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salinibacter ruber M8]
Length = 349
Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats.
Identities = 120/361 (33%), Positives = 186/361 (51%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF +D+P +A P P DS+R+MV+ D DLP + + D +V
Sbjct: 1 MKRSEFSYDVPEELVAEYPADPPDSSRMMVLDRESHDIN--HDKHFHDLPEYFSEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + +I L ++P W V P++ I+ G+ L+F
Sbjct: 59 VNDTKVYPARLYGQK----KKTGADIQVFLLRELNPESRLWDVVVDPARKIRIGNKLYF- 113
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
L A VID + I F L ++I +G PLPPYI R ++ D
Sbjct: 114 ----DDDLIAEVIDNTTSRGRTIRFSFDDVNEALYQKIRDIGETPLPPYI--DREVEEED 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ +G+VAAP + LHFT ++L RL G+ V +TLH+G G PV VED
Sbjct: 168 RDRYQTIFAENRGAVAAPKSTLHFTEDVLERLKEKGVHVVPITLHIGRGKSKPVDVEDLS 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGR-IVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H SE I TA+A+N + + + GTT R LE++ + D + P +T++
Sbjct: 228 KHRTDSEEYDIPEETAEAVNRALASDENTVTACGTTVARALESSLSADETVKPDHSWTDL 287
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P Y F+ V+ +++NFH P+S L+M+ +AF G + + Y+ A YR +++GD
Sbjct: 288 FVYPEYEFKIVERMITNFHRPESMLMMMGAAFAGYDFLFEAYEEAFEEEYRLFAFGDAIF 347
Query: 356 L 356
+
Sbjct: 348 I 348
>gi|257461414|ref|ZP_05626510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter gracilis RM3268]
gi|257441137|gb|EEV16284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter gracilis RM3268]
Length = 339
Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats.
Identities = 134/358 (37%), Positives = 188/358 (52%), Gaps = 32/358 (8%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+D++LP IA PV P+ SARL++ I+ DL L D I+FN+T
Sbjct: 9 SYDYELPSELIASAPVMPKQSARLLIYDR---AKQQITHAHFGDLADALPPCD-IIFNDT 64
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + +I L+ + N +S Y R S +K G L F QS
Sbjct: 65 RVIKARLFGHK-----NSGGKIELLLNSPLEGNKFSAYIRGS--VKVGSELKF-----QS 112
Query: 125 RLEATVIDKWNTGEILLVFSISGI-----ELERQISLVGTIPLPPYIARKRPIDARDYVD 179
LEA V + G ++ F G ++ +G +PLPPYI R +D
Sbjct: 113 GLEARVCELMEGGLRIVQFECGGKALNTHDVFEICERIGHVPLPPYIK--RADTKQDVSW 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQ+ +A+ QG+VAAPTA LHF +L+ L ++YF+TLHVGAGTF PV+V D +H
Sbjct: 171 YQSIFAREQGAVAAPTASLHFNDAMLNDLR-KRHEIYFITLHVGAGTFKPVEVADLREHK 229
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E+ I T Q L +I+ VGTT R +E SG +F+ P
Sbjct: 230 MHGELYSIPPQTTQILK----SERKILGVGTTVTRTIENFARNGQS----SGICELFLHP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G + L++NFHLPKSTL+MLV++F G+E T ++Y+ A+ YRFYSYGD L+
Sbjct: 282 GNPPIRQNFLLTNFHLPKSTLIMLVASFIGLERTLELYRIAVEKRYRFYSYGDGMLVL 339
>gi|157414859|ref|YP_001482115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81116]
gi|229598023|sp|A8FL01|QUEA_CAMJ8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157385823|gb|ABV52138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81116]
gi|307747496|gb|ADN90766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni M1]
Length = 342
Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats.
Identities = 127/363 (34%), Positives = 181/363 (49%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKN---KEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKVS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFKK 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDA 174
L+ V++ N G + F + L+ +G IPLPPYI R +
Sbjct: 116 D-----LKIRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYIK--REDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIY-HLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + + I+ VGTT R +E SGF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEII----DSKQAILGVGTTVTRTIEYYART----KTKSGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|229093489|ref|ZP_04224592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-42]
gi|228689960|gb|EEL43764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-42]
Length = 287
Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats.
Identities = 124/291 (42%), Positives = 169/291 (58%), Gaps = 14/291 (4%)
Query: 67 ITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRL 126
+ A+L+GV+ I L + + W +P+K +K+G ++ F G+ +L
Sbjct: 1 MPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF----GEGKL 52
Query: 127 EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK 186
+AT + G L FS GI + +G +PLPPYI YQT YAK
Sbjct: 53 KATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKETLED----RDRYQTVYAK 107
Query: 187 IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H MH+E
Sbjct: 108 EIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHMHAEYYH 167
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRA 305
+ TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ PGY F+A
Sbjct: 168 MSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYPGYEFKA 227
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 228 IDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 278
>gi|57238227|ref|YP_178692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni RM1221]
gi|81557544|sp|Q5HVJ3|QUEA_CAMJR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57167031|gb|AAW35810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni RM1221]
gi|315057991|gb|ADT72320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni S3]
Length = 342
Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats.
Identities = 126/363 (34%), Positives = 180/363 (49%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKN---KEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ + A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHDPLFLAQIKGRVKKDEILYFKD 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDA 174
L+ V++ N G + F + L+ +G IPLPPYI R +
Sbjct: 116 D-----LKVRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYIK--REDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIY-HLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + + I+ VGTT R +E +GF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEII----DSKQAILGVGTTVTRTIEYYART----KTKNGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|296273412|ref|YP_003656043.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Arcobacter
nitrofigilis DSM 7299]
gi|296097586|gb|ADG93536.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Arcobacter
nitrofigilis DSM 7299]
Length = 345
Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats.
Identities = 123/358 (34%), Positives = 185/358 (51%), Gaps = 22/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +D+ LP IA +P++P DSARL+V + N I+ L FL N I
Sbjct: 9 LKTSSYDYFLPKELIASKPLYPADSARLLVYNRNSDT---ITHTTYKYLLDFLPENLDIF 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A++ G + + + + + + V + ++KG L F
Sbjct: 66 LNDTKVIKARIYGKKDS-----GGKTELLFNKPLFMDRYQVMIK--GKVQKGTKLFFDEN 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG-IELERQISLVGTIPLPPYIARKRPIDARDYVD 179
LE D T + + L ++ +G +PLP Y+ R + D D
Sbjct: 119 LSAEVLELNNEDGTRTVKFFKDEKQLDFLSLIDILNKIGHLPLPHYMN--REDEKEDEKD 176
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +AK G+VAAPTA LHFT LL +L + + ++TLHVGAGTF PV ED +H
Sbjct: 177 YQTLFAKNYGAVAAPTASLHFTDELLEKLHNK-HNINYLTLHVGAGTFKPVDAEDILNHP 235
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE I + +AL + ++VGTT R +E + I G ++F+ P
Sbjct: 236 MHSEYFEISRESLEALKE----KNKTLAVGTTVTRTIEYYARTNKI----QGECDLFLNP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ VD L++NFHLPKSTL+ML+++F G+E+T ++Y+ A+ YRF+SYGD L+
Sbjct: 288 ANKPIKVDHLLTNFHLPKSTLIMLIASFVGLEKTLEIYETAVKDKYRFFSYGDGMLII 345
>gi|205355427|ref|ZP_03222198.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8421]
gi|205346661|gb|EDZ33293.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8421]
Length = 342
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 182/363 (50%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKN---KEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ IKK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRIKKDEILYFKD 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDA 174
L+ V++ N G + F + L+ +G IPLPPYI R +
Sbjct: 116 D-----LKVRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYIK--REDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIY-HLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + + I+ VGTT R +E T +GF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEII----DSKQAILGVGTTVTRTIEYYTRT----KTKNGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|86149907|ref|ZP_01068136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CF93-6]
gi|88597013|ref|ZP_01100249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 84-25]
gi|218562228|ref|YP_002344007.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|21263926|sp|Q9PHT9|QUEA_CAMJE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85839725|gb|EAQ56985.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CF93-6]
gi|88190702|gb|EAQ94675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 84-25]
gi|112359934|emb|CAL34723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|284925838|gb|ADC28190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni IA3902]
gi|315927313|gb|EFV06657.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315928649|gb|EFV07936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 305]
Length = 342
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 182/363 (50%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKN---KEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ IKK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRIKKDEILYFKE 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDA 174
L+ V++ N G + F + L+ +G IPLPPYI R +
Sbjct: 116 D-----LKVRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYIK--REDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIY-HLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + + I+ VGTT R +E T +GF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEII----DSKQAILGVGTTVTRTIEYYTRT----KTKNGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|187917904|ref|YP_001883467.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
hermsii DAH]
gi|119860752|gb|AAX16547.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
hermsii DAH]
Length = 348
Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats.
Identities = 122/360 (33%), Positives = 184/360 (51%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP + IA P R +RLMV+ + + ++D+ +++SN +V
Sbjct: 4 MDTKEFYFDLPHNLIAQYPSEKRGLSRLMVLD--SGKQKIYHNDSINDIFKYIDSNTFLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++V +++ + + R++ ++++ +K G +
Sbjct: 62 FNDSRVRKSRIYAK-----TDHGGSVEVLILDRLTGDTFTSLISKAKKQSIGRVYTLPQG 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A +I K L G IPLPPYI R D D Y
Sbjct: 117 -----LLAQIISKSGNEFTLKFNKCVDES---YFEQHGLIPLPPYIK--RNYDREDEDRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
+T Y+K GS A+ TAGLHF+ L S+L I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 167 RTIYSKYIGSSASATAGLHFSEELFSKLDEKNIEYDFITLHVGLGTFLPVRTKTIEEHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP- 299
H E I A L K+ G +I++VGTT+LR LE+A + + TN+FI P
Sbjct: 227 HFESFSIKDSVALRLEEAKALGKKILAVGTTTLRALESAYYKQRGLIRGDQKTNLFIYPG 286
Query: 300 -GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY F+ +D+L +NFH P+STLLMLVS+F G + Y+ A+ Y+F+SYGD +L
Sbjct: 287 KGYEFKFIDMLFTNFHTPESTLLMLVSSFGGKDFVFTAYREAVKMNYKFFSYGDATLFLN 346
>gi|222823668|ref|YP_002575242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter lari RM2100]
gi|222538890|gb|ACM63991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter lari RM2100]
Length = 342
Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats.
Identities = 130/362 (35%), Positives = 195/362 (53%), Gaps = 32/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D++LP IA P+ P+++A+L+V C IS DL L I+
Sbjct: 8 LLLSSYDYNLPNELIANFPILPKENAKLLVYER---CKDQISHLHFKDLAKILPP-CEII 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I ++ + N + V R +K+G IL+F
Sbjct: 64 FNDTKVIKARIYGNKES-----GSKIELFINHPLKNNDFLVQIR--GKVKEGQILYF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDAR 175
++ L+A + + G + F EL +G IPLPPYI R +A+
Sbjct: 114 --ENSLKAKIKKLHDDGTREVEFFNDEKELNHHEVFEILEKIGHIPLPPYIK--RADEAQ 169
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D ++YQ+ +AK QG+VAAPTA LHF +++ L ++ +TLHVGAGTF V+ ED
Sbjct: 170 DNINYQSIFAKNQGAVAAPTASLHFDETMINEL-KKNHNIHTITLHVGAGTFKGVECEDI 228
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE ID T + +I+ VGTT R +E + GF ++
Sbjct: 229 RNHKMHSEFFHIDDETCVLI----DSSKKILGVGTTVTRCIEYYHRK----KIKEGFCDL 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + +D L++NFHLPKSTL+MLV+AF G E+T K+Y AI + YRFYSYGD L
Sbjct: 281 FLHPQNTPQRLDYLLTNFHLPKSTLIMLVAAFIGREKTLKLYHEAIENNYRFYSYGDGML 340
Query: 356 LF 357
+
Sbjct: 341 II 342
>gi|203283951|ref|YP_002221691.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia duttonii Ly]
gi|201083394|gb|ACH92985.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia duttonii Ly]
Length = 352
Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 129/360 (35%), Positives = 187/360 (51%), Gaps = 20/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R A+LMV+ C + V+D+ ++ SN +V
Sbjct: 7 METKEFYFDLPHHLIAQYPSERRGLAKLMVLD--SICQKIYHTDSVNDILKYIGSNTFLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++V +++ + + + R++ ++++ +K K G + F
Sbjct: 65 FNDSRVRKSRIYAK-----TDYDGNVEFLILNRLTGDTFTSLISKAKRQKVGKVYRFPQD 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A +I K + + G IPLPPYI R D D Y
Sbjct: 120 -----LSAQIISKLDNEFTIKFNRYVDES---YFEQYGFIPLPPYIK--RDYDKEDEDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ L S+ I+ F+TLHVG GTF+PV+ + + H M
Sbjct: 170 QTIYSKYIGSSASATAGLHFSEELFSKFAQNNIEYDFITLHVGLGTFLPVRTKTIEKHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L KS G +I++VGTT+LR LE+A + G TN+FI P
Sbjct: 230 HFESFSIRDSVACRLERAKSLGKKILAVGTTTLRALESAYDKQKGRFTRGEQKTNLFIYP 289
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y+F++VD+L +NFH P+STLLMLVS+F G + Y+ A++ YRF+SYGD +L
Sbjct: 290 GKNYKFKSVDMLFTNFHTPESTLLMLVSSFGGKDFVFNAYREAVTMNYRFFSYGDATLFL 349
>gi|115379876|ref|ZP_01466938.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
gi|115363113|gb|EAU62286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
Length = 331
Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 125/339 (36%), Positives = 176/339 (51%), Gaps = 19/339 (5%)
Query: 29 MVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEI-- 86
M V + +DLP+ L D +V N+ +VI A+L G + R E +
Sbjct: 1 MTVSRSTKAC---EHLRFADLPSLLRPGDVLVVNDARVIPARLLGAKVGTGGRVELLVVR 57
Query: 87 -------SCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEI 139
S L + W + SK +K G + F + +
Sbjct: 58 PAASTMTSAALSLAAEAMDWICLGQASKGLKPGAQVAFGGG----LVGEVLEGLGGGEYR 113
Query: 140 LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLH 199
+ + G L+ + G +PLPPYI R DA D YQT YA+ G+VAAPTAGLH
Sbjct: 114 VRFQAPPGGSLQALLEQAGRLPLPPYIT--REPDAADAERYQTLYARAPGAVAAPTAGLH 171
Query: 200 FTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVK 259
F+ + L + G++ VTL VG GTF+PV+ E+ D H MH E + TA +N+ +
Sbjct: 172 FSEAIFEALDARGVRRVTVTLDVGPGTFLPVREEELDRHKMHPERYGVPEQTAAEVNAAR 231
Query: 260 SRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
+ G R+V+VGTT +R LE AT G++ +G T +FI PGY FR VD++++NFHLP+S
Sbjct: 232 AEGRRVVAVGTTVVRTLEAATDPATGLLRAGTGETVLFIRPGYAFRQVDLMLTNFHLPRS 291
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TL+MLVSA G E T YQ A+ YRF+SYGD L+
Sbjct: 292 TLVMLVSALLGREHTLAAYQEAVREGYRFFSYGDAMLVT 330
>gi|203287494|ref|YP_002222509.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia recurrentis A1]
gi|201084714|gb|ACH94288.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia recurrentis A1]
Length = 352
Score = 306 bits (785), Expect = 3e-81, Method: Composition-based stats.
Identities = 129/360 (35%), Positives = 187/360 (51%), Gaps = 20/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R A+LMV+ C + V+D+ ++ SN +V
Sbjct: 7 METKEFYFDLPHHLIAQYPSERRGLAKLMVLD--SICQKIYHTDSVNDILKYIGSNTFLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++V +++ + + + R++ ++++ +K K G + F
Sbjct: 65 FNDSRVRKSRIYAK-----TDYDGNVEFLILNRLTGDTFTSLISKAKRQKVGKVYRFPQD 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A +I K + + G IPLPPYI R D D Y
Sbjct: 120 -----LSAQIISKLDNEFTIKFNRYVDES---YFEQYGFIPLPPYIK--RDYDKEDEDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ L S+ I+ F+TLHVG GTF+PV+ + + H M
Sbjct: 170 QTIYSKYIGSSASATAGLHFSEELFSKFAQNNIEYDFITLHVGLGTFLPVRTKTIEKHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L KS G +I++VGTT+LR LE+A + G TN+FI P
Sbjct: 230 HFESFSIRDSVACRLERAKSLGKKILAVGTTTLRALESAYDKQKGRFTRGEQKTNLFIYP 289
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y+F++VD+L +NFH P+STLLMLVS+F G + Y+ A++ YRF+SYGD +L
Sbjct: 290 GKNYKFKSVDMLFTNFHTPESTLLMLVSSFGGKDFVFDAYREAVTMNYRFFSYGDATLFL 349
>gi|313674814|ref|YP_004052810.1| s-adenosylmethionine/tRNA-ribosyltransferase isomerase [Marivirga
tractuosa DSM 4126]
gi|312941512|gb|ADR20702.1| S-adenosylmethionine/tRNA-ribosyltransferase isomerase [Marivirga
tractuosa DSM 4126]
Length = 406
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 130/413 (31%), Positives = 194/413 (46%), Gaps = 75/413 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++ ++LP RIA P+ RD ++L+V I D+ + L N +++FN
Sbjct: 12 LNKYQYELPEERIAKFPLEKRDHSQLLVYQKGN-----IQHQHFYDIKSHLPENSSLIFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-------------NSWSVYARPSKVI 109
NTKVI A+++ + + +I L + P W K
Sbjct: 67 NTKVIPARIHFQK-----QSGAKIEIFLLSPLEPTPEVAQAMLAKKKCIWHCMVGNRKRW 121
Query: 110 KKGDILH--FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
K D L F ++ G+ ++ AT D + I + + + L+GT PLPPY+
Sbjct: 122 KIQDQLERFFETEYGKIQVTATYAD-YEQNHIQFEWDNDAVPFVEIVELMGTTPLPPYLN 180
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R D YQT Y+K +G+VAAPTAGLHFT +L + ++ +TLHVGAGTF
Sbjct: 181 --RTATDEDKPRYQTVYSKNEGAVAAPTAGLHFTDTILKDIQ-KSHSIHELTLHVGAGTF 237
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-------- 279
P+K E+ +H MH E ID T + L I +VGTTS+R LE+A
Sbjct: 238 QPIKAENVLEHDMHCEQIQIDKSTIEFLAQ---SENPITAVGTTSIRSLESAYWFGVQLI 294
Query: 280 ----------------------------------TTEDGIINPWSGFTNIFITPGYRFRA 305
+ + G T IFI PGY F+
Sbjct: 295 NKEARTFHITKLYPYEKGFDELPRRKESFQAILNYMKAENVESLHGDTEIFIFPGYEFQV 354
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V+ L++NFH P+STL++L++AF G E+ +K+Y A+ + YRF SYGD+SLL
Sbjct: 355 VNGLITNFHQPESTLILLIAAFIG-EKWQKVYDEALKNDYRFLSYGDSSLLLP 406
>gi|153951843|ref|YP_001398182.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. doylei 269.97]
gi|152939289|gb|ABS44030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. doylei 269.97]
Length = 343
Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats.
Identities = 126/363 (34%), Positives = 182/363 (50%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 6 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKN---KEIFHTTFKNLQDFL-PNCAIF 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 62 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFKE 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDA 174
L+A +++ N G + F + L+ +G IPLPPYI R +
Sbjct: 117 D-----LKAYIVELLNEGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYIK--REDEK 169
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L +TLHVGAGTF V+ E+
Sbjct: 170 SDLKDYQSIFAKNLGAVAAPTASLHFSEIMLENLRKKHEIY-HLTLHVGAGTFKGVECEN 228
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + + I+ VGTT R +E +GF +
Sbjct: 229 IQEHKMHSEFFNIPKRACEII----DSKQAILGVGTTVTRTIEYYART----KTKNGFCD 280
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 281 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 340
Query: 355 LLF 357
L+
Sbjct: 341 LIL 343
>gi|315638562|ref|ZP_07893738.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis JV21]
gi|315481406|gb|EFU72034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis JV21]
Length = 339
Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 125/357 (35%), Positives = 184/357 (51%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP IA P P+++ARL++ I+ ++L FL + AI
Sbjct: 5 LKLSNYDYFLPKELIATHPAQPKEAARLLIYEREK---DKITHSTFANLEQFL-PDCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I LH VS ++ R +KKG+ILHF
Sbjct: 61 FNDTKVIKARIYGKKES-----GGKIELFLHSSVSECEFNAQIR--GRVKKGEILHFKEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LE ++ +L + +G IPLPPYI R +D DY
Sbjct: 114 LSAEILELYADGLRKVCFKQDENLLNTPKLYALLEKIGHIPLPPYIK--RADTLKDTQDY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q+ +AK G+VAAPTA LHF+ +L L +++ +TLH+GAGTF V+ ED +H M
Sbjct: 172 QSIFAKNLGAVAAPTASLHFSEAMLKSL-KKRHEIHTITLHIGAGTFKSVECEDIREHQM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ + I+ VGTT+ R +E SG ++F+ P
Sbjct: 231 HSEFFHINEAA----KACIDSKKAILGVGTTATRSIEYYARTGLC----SGACDLFLHPF 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ + L++NFHLPKSTL+MLVS+F G E+T +Y+ A+S YRFYSYGD L+
Sbjct: 283 NKPLRQNFLLTNFHLPKSTLIMLVSSFIGREKTLALYKEAVSLRYRFYSYGDAMLIL 339
>gi|168699707|ref|ZP_02731984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemmata
obscuriglobus UQM 2246]
Length = 341
Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 130/353 (36%), Positives = 179/353 (50%), Gaps = 16/353 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FD+ LP IA P RD+ARL+VV + I H+ DLP L+ D +V N+T+
Sbjct: 4 FDYHLPEHLIAQHPAAERDAARLLVVRRDTQ---RIQHHIFRDLPELLSPGDLVVLNDTR 60
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A++ G R + W + A+ + G + +
Sbjct: 61 VLPARVVGRR----EATGGKWEGLFLRATETGLWEMLAQTRGYPEVGTVFV-----TDTG 111
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
L + + L+ G +S G IPLPPYI + R DA D YQT YA
Sbjct: 112 LRLVLRGRTADRHWLMQPEAEGTP-PEILSTYGHIPLPPYIRKGRE-DAGDRERYQTVYA 169
Query: 186 KIQGSVAA-PTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A PTAGLHFT + RL + GI VTLHVG GTF PVK +D H +H E
Sbjct: 170 GAAAGSVAAPTAGLHFTPAVFDRLTARGIGTARVTLHVGLGTFAPVKEDDPTKHAIHHEW 229
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ T + K+RGGR+V++GTT+ R LE+A DG+ + G T +FI + FR
Sbjct: 230 CAVPQGTVDTIRDTKARGGRVVAIGTTTTRTLESAARPDGL-RSFCGETGLFIHEPFEFR 288
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
AVD L++NFHLP++TLL+LV A G E + Y A++ YRF+SYGD L+
Sbjct: 289 AVDALVTNFHLPRTTLLLLVGALAGDELLARAYAEAVTCEYRFFSYGDAMLVL 341
>gi|189219693|ref|YP_001940334.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Methylacidiphilum infernorum V4]
gi|189186551|gb|ACD83736.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Methylacidiphilum infernorum V4]
Length = 337
Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats.
Identities = 130/366 (35%), Positives = 186/366 (50%), Gaps = 38/366 (10%)
Query: 1 MM-VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M + + FDLP IAL P+ RD +LMVV H +L FL+ D +
Sbjct: 1 MNFIDHYSFDLPSELIALDPLPSRDGCKLMVVDRKTQ---RFYHHRFYELALFLSKEDLL 57
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-- 117
V NN+KVI A +++ + + P W V A P K +K G I+
Sbjct: 58 VLNNSKVIPA--------FFQSADEKTTFLFVQSLDPLHWKVMASPGKHLKMGSIIPIKC 109
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP------ 171
+Q+ S + A + K + +L F + E ++ +G PLPPYI + R
Sbjct: 110 PTQNPNSPITARLSSKLQSAYYVLEF-----DEEPKLEWLGLPPLPPYIRKLRKKKNRVE 164
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
I+ +D YQT +A+ GS+AAPTAGLHF+ +L + F+TLHVG GTF P+
Sbjct: 165 IEQKDREYYQTVFAQHPGSIAAPTAGLHFSKEMLEQF-----STAFITLHVGPGTFRPLS 219
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
E + +E ID+ L G RIV+VGTT +R+LET + P G
Sbjct: 220 TEQLATGRLEAEYYSIDSS----LKEKYKPGRRIVAVGTTVVRVLETI----KNLEPQQG 271
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+T++FI P + F+ + L++NFHLP+S+L +L AF G E KK Y AI +YRFYSYG
Sbjct: 272 WTDLFIFPPFTFKRTNALITNFHLPRSSLFLLTCAFAGTELLKKAYAEAIQKSYRFYSYG 331
Query: 352 DTSLLF 357
D L+
Sbjct: 332 DAMLII 337
>gi|237752961|ref|ZP_04583441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter winghamensis ATCC BAA-430]
gi|229375228|gb|EEO25319.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter winghamensis ATCC BAA-430]
Length = 361
Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats.
Identities = 116/368 (31%), Positives = 182/368 (49%), Gaps = 25/368 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +++ LP IA P+ P+++A+L+V + +I+ + FL + +VFN
Sbjct: 6 LSSYNYTLPKECIATEPITPKEAAKLLVFNRK---DCIITHSTFRNFANFLPKDTLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRR-----EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NTKV+ A++ G + + +I H +S N + + + +K G I+ F
Sbjct: 63 NTKVLPARIYGKKILQNLKNDSNLCGAKIEALFHKEISENRYLMQFK--GRLKAGSIISF 120
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVF------SISGIELERQISLVGTIPLPPYIARKRP 171
S + I + +S + G IPLPPYI R
Sbjct: 121 GSVYARILGNLANIGIGFKEAEFFILKENKEIPLSRDAFFAFLEHSGHIPLPPYIK--RD 178
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D DYQ+ +AK G++AAPTA LHF+ + + +TLH GAGTF+ V
Sbjct: 179 DTQADKQDYQSVFAKHLGAIAAPTASLHFSKEAY-KYLKEHFSTTEITLHTGAGTFLGVN 237
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPW 289
E+ +H MH+E FI +A+ + I ++GTT+ R +ET +
Sbjct: 238 TENILEHKMHTESFFIPQDSAKKMKVASH----ITAIGTTAARTIETYARSEAFKEGKAL 293
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG ++F+ P +A L++NFHLPK+TLLMLV++F G+E+T K+YQ AI+ YRFYS
Sbjct: 294 SGECDLFLHPQNPPKATSALLTNFHLPKTTLLMLVASFIGLEQTLKLYQEAIAKNYRFYS 353
Query: 350 YGDTSLLF 357
YGD L+
Sbjct: 354 YGDGMLIL 361
>gi|154149256|ref|YP_001406649.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter hominis ATCC BAA-381]
gi|153805265|gb|ABS52272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter hominis ATCC BAA-381]
Length = 340
Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 185/356 (51%), Gaps = 22/356 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V+ +D++LP IA PV P+++ARL+V + IS DL L + AI+F
Sbjct: 7 LVESYDYELPRELIANAPVMPKEAARLLVYNRANG---EISHLHFGDLAEIL-PDCAIIF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A++ G + +I L+ + +SVY R S +K G IL F
Sbjct: 63 NDTKVIKARIFGHKDS-----GGKIELLLNSPLGEGKFSVYVRGS--VKIGAILEFDKNL 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
LE + EL + + +G +PLPPYI R D YQ
Sbjct: 116 KAEILELFDDGLRVARFSQNSHILETHELFKILDEIGHVPLPPYIK--RADTKDDESWYQ 173
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +AK +G+VAAPTA LHF+ +L+ L + ++TLHVGAGTF PV+V + DH MH
Sbjct: 174 TIFAKNEGAVAAPTASLHFSDEMLADLKAKHDIY-YLTLHVGAGTFKPVEVANIKDHKMH 232
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I TA+ L I+ VGTT R +E I G +F+ P
Sbjct: 233 GEYYSIPERTAKLL----DSEREILGVGTTCTRTIEFYARTHKIG----GICELFLHPNN 284
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ L++NFHLPKSTL+MLV++F G+E+T ++Y+ A+ YRFYSYGD L+
Sbjct: 285 PPIRQNHLLTNFHLPKSTLIMLVASFIGLEKTLELYKIAVEKKYRFYSYGDGMLIL 340
>gi|83309697|ref|YP_419961.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase
[Magnetospirillum magneticum AMB-1]
gi|82944538|dbj|BAE49402.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase
[Magnetospirillum magneticum AMB-1]
Length = 291
Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats.
Identities = 153/300 (51%), Positives = 199/300 (66%), Gaps = 12/300 (4%)
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKVI A+L G R + TLH R + W +ARP+K +K GD + F
Sbjct: 1 MVFNDTKVIPARLLGRR------GLAGVELTLHQRTGLSQWKAFARPAKKLKPGDRVDFA 54
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
A V +K GE+ L F SG +L + G +PLPPYI R+ D RD
Sbjct: 55 EG-----FSAVVAEKGEMGEVTLDFDRSGEDLMVALETHGHLPLPPYI-RQGTADERDKG 108
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTAGLHFT LL+ L + G+K VTLHVGAGTF+PVKV+DTDDH
Sbjct: 109 DYQTVFAREKGAVAAPTAGLHFTPELLAALDARGVKRVTVTLHVGAGTFLPVKVDDTDDH 168
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH EIG + TA A+N+ ++ GGR+V+VGTTS RLLE+A G ++P+ G T+IFIT
Sbjct: 169 RMHQEIGVVTPETAAAVNAARAAGGRVVAVGTTSARLLESAADPLGTLHPFDGATDIFIT 228
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR VD+L++NFHLP+STL ML+SAF G+E K Y+HA + YRFYSYGD LL +
Sbjct: 229 PGHVFRQVDVLLTNFHLPRSTLFMLISAFAGLERMKAAYEHAKAAGYRFYSYGDCCLLER 288
>gi|313681725|ref|YP_004059463.1| s-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Sulfuricurvum kujiense DSM 16994]
gi|313154585|gb|ADR33263.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Sulfuricurvum kujiense DSM 16994]
Length = 340
Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats.
Identities = 121/357 (33%), Positives = 177/357 (49%), Gaps = 21/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +++ LP IA P+ PRD ARL+V + + I+ L +FL N I+
Sbjct: 5 LLTSSYEYTLPEELIATHPIHPRDHARLLVYNRSDKT---ITHARFDALESFLPENCGII 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + L + +++++ +K G IL F
Sbjct: 62 FNDTKVIKARLYGKKESGGA-------IELLINRPHDAYAINVYIKGRVKTGTILLFDDT 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ I EL + +G IPLPPY+ R D+ D +Y
Sbjct: 115 LHAKVIQLHDDGSREVNFYHHENLIRFEELLPILEKIGHIPLPPYL--GREDDSEDEREY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q+ +A +G+VAAPTA LHFT L + S FVTLHVG+GTF PV+ E DH M
Sbjct: 173 QSVFAHHEGAVAAPTASLHFTDELFDAVCS-SHPHAFVTLHVGSGTFKPVEAEVITDHPM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I + ++ +GTTS R +E G N+F+ P
Sbjct: 232 HSEYFHISTDAQNLIR----SDLPLLCIGTTSTRTVEYHVRA----KETQGEANLFLHPN 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++ L++NFHLP+STLLMLV++F G+EET ++Y+ AI YRF+SYGD L+
Sbjct: 284 NPPLRINHLLTNFHLPQSTLLMLVASFVGLEETHRIYREAIDQNYRFFSYGDAMLIL 340
>gi|32395561|gb|AAP58353.1| QueA [Pseudomonas syringae]
Length = 299
Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 124/319 (38%), Positives = 174/319 (54%), Gaps = 20/319 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKST 319
VD L++NFHLP+ST
Sbjct: 281 RPSHVVDALVTNFHLPEST 299
>gi|32266986|ref|NP_861018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter hepaticus ATCC 51449]
gi|46576948|sp|Q7VG37|QUEA_HELHP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|32263038|gb|AAP78084.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Helicobacter hepaticus ATCC 51449]
Length = 365
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 113/365 (30%), Positives = 177/365 (48%), Gaps = 24/365 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LP S IA P PR+ A+L++ + I F+ + +VFN
Sbjct: 15 LSSYDYTLPFSAIAQNPANPRERAKLLIYQRDSG---RIIHSDFYHFCDFVPKDTLLVFN 71
Query: 63 NTKVITAQLNGVRFCHINRR--EKEISCTLHMRVSPN---SWSVYARPSKVIKKGDILHF 117
+T+VI A++ + ++ +K H + + +K GD L
Sbjct: 72 DTRVIKARIYAHKLDCNTQKLSDKTFEIFYHKPLQSTSSAIPLFLVQIKGRVKCGDKLLI 131
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELER-----QISLVGTIPLPPYIARKRPI 172
+ L A V + + G ++ F + LE + G PLPPYI R
Sbjct: 132 NTDSTNPFLIAQVQECLDNGLRVVSFMQNEHALEYIQVLDMLEKYGHTPLPPYIK--RED 189
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+D YQ+ ++K GS+AAPTA LHF+ + + + + F+TLH+GAGTFM V+
Sbjct: 190 SCQDAHFYQSVFSKQLGSIAAPTASLHFSKESIESIKAQ-FETCFLTLHIGAGTFMNVES 248
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
D H++H E + +A A+ +++ +GTTS R +E G
Sbjct: 249 ADIRHHLIHKEFFSLSPQSAAAI----QNAHKVLCIGTTSARCVEYYAR----YKILQGE 300
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ P F+ VD L++NFHLPKSTL+MLVSA G E+ ++Y+ A+ YRFYSYGD
Sbjct: 301 CDIFLYPSKSFKRVDYLLTNFHLPKSTLMMLVSAMVGREKCLELYKLALEKGYRFYSYGD 360
Query: 353 TSLLF 357
L+
Sbjct: 361 GMLIL 365
>gi|224531909|ref|ZP_03672541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
valaisiana VS116]
gi|224511374|gb|EEF81780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
valaisiana VS116]
Length = 346
Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 126/361 (34%), Positives = 184/361 (50%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPHSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ + + + R+ ++ SK ++ F
Sbjct: 59 FNNSKVRKSRMYAE-----SEIGSNVEFLILDRIGTAMFTALISKSKKQIVDNVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L + +L F E G +P+PPYI R D D Y
Sbjct: 114 LIGKILSKNGSEI------VLKFDADVGE--DYFEKHGFVPIPPYIK--RDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AA TAGLHF +L S I+ FVTLHVG GTF+PV+ + ++H M
Sbjct: 164 QTVYSKYIGSAAAATAGLHFGKDLFSVFEKNNIEYDFVTLHVGLGTFLPVRSKRIEEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G +I+S+GTT+LR LE++ TN+FI P
Sbjct: 224 HFETFLIKDSVADRLENAKFLGKKILSIGTTTLRALESSYDHKLRKFKTGQQSTNLFIYP 283
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ A++ +Y+F+SYGD L+
Sbjct: 284 DQNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFNSYKEAVNQSYKFFSYGDAMLVL 343
Query: 358 Q 358
Sbjct: 344 N 344
>gi|224438516|ref|ZP_03659436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter cinaedi CCUG 18818]
gi|313144943|ref|ZP_07807136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter cinaedi CCUG 18818]
gi|313129974|gb|EFR47591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter cinaedi CCUG 18818]
Length = 373
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 125/373 (33%), Positives = 184/373 (49%), Gaps = 31/373 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP S IA P PR+SA+L+V I+ F+ + +VF
Sbjct: 15 LLSSYDYALPQSAIAQSPSIPRESAKLLVYERKS---DKITHSDFYHFSDFIPKDTLLVF 71
Query: 62 NNTKVITAQLNGVRF-CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A++ + K + H + + V + +K GD L S
Sbjct: 72 NNTKVINARIYAHKLNSQAKPNPKRMEIFFHKALDSFRFLVQIK--GRVKSGDRLILESH 129
Query: 121 DGQSR-LEATVIDKWNTGEILLVFS-------------ISGIELERQISLVGTIPLPPYI 166
+R + A V++ G ++ F ++ E+ + G IPLPPYI
Sbjct: 130 KAFTRPIIAQVLECCEDGMRIVEFMESTKTHSSQENRILNDKEVFELFNNHGYIPLPPYI 189
Query: 167 ARKRPIDARDYV--DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
R YQ+ +AK GSVAAPTA LHF+ L L + FVTLH+GA
Sbjct: 190 KRDEANQNLQEDSVFYQSVFAKELGSVAAPTASLHFSKQSLESLQ-KSFQTCFVTLHIGA 248
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTF+ V+ ED +H +H E I + +A+A+ + +++ VGTTS R +E
Sbjct: 249 GTFINVESEDIRNHAIHKEYFSISSSSAKAI----THAKKVLCVGTTSARCVEYMMR--- 301
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
G +IF+ PG F+ VD L++NFHLPKSTL+MLVSA G E+ ++Y A+
Sbjct: 302 -YKVLCGECDIFLYPGVEFKRVDYLLTNFHLPKSTLIMLVSAMVGREKCLELYNIALEKG 360
Query: 345 YRFYSYGDTSLLF 357
Y+FYSYGD L+
Sbjct: 361 YKFYSYGDGILIL 373
>gi|188994845|ref|YP_001929097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
gi|188594525|dbj|BAG33500.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
Length = 405
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 144/413 (34%), Positives = 190/413 (46%), Gaps = 73/413 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA + RD+ +L+V I D + S L L S +V N
Sbjct: 9 IADYDYPLPEERIAKHALPQRDACKLLVYDKG-----EIKDAVFSRLSEVLPSGSMLVRN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NT+VI A+L + I VSP W +K +
Sbjct: 64 NTRVIRARLLFHKS-----TGATIEVFCLEPVSPAQYELSLTARGSCVWHCMVGNAKRWR 118
Query: 111 KGDI-LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
GD+ + S G S L D G I + + + G +P+PPY+
Sbjct: 119 SGDLQMEIPSPQGGSILLTASHDPAADGCIRFSWENDHYTFGEILEMAGILPIPPYLN-- 176
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
R + D YQT YAK QGSVAAPTAGLHFT RL + G V VTLHVGAGTF P
Sbjct: 177 RDTEEEDLETYQTVYAKNQGSVAAPTAGLHFTEEEFERLRAQGTPVIDVTLHVGAGTFRP 236
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------- 278
VK E +H MH E+ I+ + +AL + GRIV+VGTTS+R LE+
Sbjct: 237 VKSETIGEHRMHRELIVIERSSLEALRDWQ---GRIVAVGTTSVRTLESLYWLGRSLSTA 293
Query: 279 --ATTEDGIINPWSGF-------------------------------TNIFITPGYRFRA 305
+ E +N W + T I I PGYR+R
Sbjct: 294 SHTSQESLKVNQWEAYENEDAALSRSEAIRIILAWMDEQGVETLIFPTKILIAPGYRYRM 353
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
VD +++NFH P+STLL+LVSAF G + K +Y HA+ YRF SYGD SLL
Sbjct: 354 VDAMITNFHQPRSTLLLLVSAFIGED-WKAVYHHALESGYRFLSYGDGSLLIP 405
>gi|294055283|ref|YP_003548941.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Coraliomargarita akajimensis DSM 45221]
gi|293614616|gb|ADE54771.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Coraliomargarita akajimensis DSM 45221]
Length = 361
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 129/377 (34%), Positives = 183/377 (48%), Gaps = 36/377 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LP IA P RD++RLMV++ + ++ +D+ FL +N
Sbjct: 1 MDASLFDFHLPNECIAQEPAATRDASRLMVINRSTR---EVNHVHFADIGGFLPTNARFF 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN-SWSVYARPSKVIKKGDILHFFS 119
NN V+ A++ G R ++ C L +W R G
Sbjct: 58 RNNAAVLKARIYGQRPS-----GGKVECLLLQPAEDALTWWCLLR------PGKKAAQTG 106
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPPYI--ARKRPIDARD 176
+ A V++ + G + F + + +G +PLPPYI + P A D
Sbjct: 107 FEMDGEYRAEVLEAGSNGNYKVRFHLERNETVTDLSERLGIMPLPPYIAREQDDPRRAAD 166
Query: 177 YVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA + +VAAPTAGLHFT L+ +L G + + +TL VG GTF P++VE
Sbjct: 167 NERYQTVYADYAKRVAVAAPTAGLHFTPELIDQLSQAGAEFHDLTLQVGIGTFHPIQVEQ 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW----- 289
+DH +H E I + Q+L S G R+ +VGTTS+R +E A +
Sbjct: 227 IEDHNIHHEWYEIPSAAFQSL-QDSSSGPRV-AVGTTSVRSIEDALSRTQQSPESCLTPT 284
Query: 290 ---SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHA 340
+IFI P +F AVD +++NFHLPKSTLL LVSAF GI+ K++Y A
Sbjct: 285 GSVQAEADIFIYPPAKFAAVDHMITNFHLPKSTLLCLVSAFLTPGSTDGIDWLKELYADA 344
Query: 341 ISHAYRFYSYGDTSLLF 357
I+ YRFYSYGD L+
Sbjct: 345 IARKYRFYSYGDAMLIL 361
>gi|57242389|ref|ZP_00370328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis RM3195]
gi|57017069|gb|EAL53851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis RM3195]
Length = 339
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 122/357 (34%), Positives = 183/357 (51%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP IA P P+++ARL++ ++ ++L FL + AI
Sbjct: 5 LQLSNYDYTLPKELIATHPAQPKEAARLLIYEREK---DRVTHSTFANLEQFL-PDCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I LH VS ++ R +KKG+ILHF
Sbjct: 61 FNDTKVIKARIYGTKES-----GGKIELFLHSSVSECEFNAQIR--GKVKKGEILHFKEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LE ++ L + +G IPLPPYI R +D DY
Sbjct: 114 LSAKILELYADGLRKVCFKQDENLLNTPTLYALLEKIGHIPLPPYIK--RADTLKDTQDY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q+ +AK G+VAAPTA LHF+ +L L +++ +TLH+GAGTF V+ ED +H M
Sbjct: 172 QSIFAKNLGAVAAPTASLHFSEAMLESL-KKRHEIHTITLHIGAGTFKSVECEDIREHQM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ + I+ VGTT+ R +E SG ++F+ P
Sbjct: 231 HSEFFHINQVA----KACIDSKKAILGVGTTATRSIEYYARTGLC----SGACDLFLHPF 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ + L++NFHLPKSTL+MLVS+F G ++T +Y+ A++ YRFYSYGD L+
Sbjct: 283 NKPLRQNFLLTNFHLPKSTLIMLVSSFIGRKKTLALYKEAVTLRYRFYSYGDAMLIL 339
>gi|332178598|gb|AEE14287.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Thermodesulfobium narugense DSM 14796]
Length = 335
Score = 302 bits (773), Expect = 7e-80, Method: Composition-based stats.
Identities = 127/354 (35%), Positives = 187/354 (52%), Gaps = 27/354 (7%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+ ++ LP +IA P+ PRD+A+L+VV L D +V DLP FLN D I+ NN
Sbjct: 9 NDLNYFLPNEKIAQNPIEPRDNAKLLVVDRKK---LSFEDCIVRDLPNFLNEGDLIILNN 65
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
TKVI A+L I ++ L ++ + +P K +KKG + S+
Sbjct: 66 TKVIKARLYA-----ITDTSAKVEMLLIKKLDNKTGLFMTKPGKRLKKGKEIIINSKK-- 118
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
V D G ++ E+++ I G IP+PPY+ + YQT
Sbjct: 119 ---MGIVRDIDLQGRRIIELY---DEIDKVIEEFGMIPIPPYVKKFSKDFN---EKYQTK 169
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A + GSVAAPTAGLHFT +LL L G+ + F+TLHVG GTF + E + ++ E
Sbjct: 170 FANVPGSVAAPTAGLHFTESLLESLREKGVLIKFITLHVGPGTFKSISNE--GEVLLEPE 227
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
I ++ K +I+ VGTT++R +E+ + P+SG+ + I PGY F
Sbjct: 228 WVDISQDVCDSIKKAKGNN-KILVVGTTTMRTVEST-----NLEPYSGYIDTVILPGYNF 281
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ D+ M+NFHLP ++LL L AF GIE KK Y++AI + YRFYS+GD L+
Sbjct: 282 KVPDMFMTNFHLPMTSLLALTMAFGGIELIKKAYKYAIENDYRFYSFGDAMLIL 335
>gi|116075044|ref|ZP_01472304.1| Queuosine biosynthesis protein [Synechococcus sp. RS9916]
gi|116067241|gb|EAU72995.1| Queuosine biosynthesis protein [Synechococcus sp. RS9916]
Length = 371
Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 185/363 (50%), Gaps = 12/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP RIA PV PR +ARL++V P + + V D L + D +V
Sbjct: 7 LQLGSYDYVLPEERIAQSPVEPRHAARLLMVPPADAPLEQVRHQQVWDWQQELRAGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+ + R + + W ARP+K ++ GD +
Sbjct: 67 VNDTR-----VLRARLRVRRSGGGQAELLVLEPRGEGQWLCLARPAKKLRPGDQVWLEGL 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDY 177
+ +S V TG ++ F + +E + G +PLPPYIAR D
Sbjct: 122 EQESVALQVVAVDQATGGRVMQFPSGCDDAVAIEGLLQRYGEVPLPPYIARHDADDQ--- 178
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + LL L G+ + VTLHVG GTF PV+ ED
Sbjct: 179 TRYQTRYASKPGAVAAPTAGLHLSDALLDCLREKGVTIAHVTLHVGLGTFRPVETEDLTQ 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
+HSE + +A+ + RGGR+++VGTTS+R LE A G + P G ++
Sbjct: 239 LTLHSEWVEVTPEVVRAVEECRQRGGRVMAVGTTSVRALEGAAQAGGGQLQPLKGSVDLV 298
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGYRF V L++NFHLPKS+LL+LVSA G E +Y AI AYRFYSYGD +
Sbjct: 299 IQPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGRERLLALYGVAIEEAYRFYSYGDAMWI 358
Query: 357 FQK 359
+
Sbjct: 359 APE 361
>gi|34540718|ref|NP_905197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis W83]
gi|34397032|gb|AAQ66096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Porphyromonas gingivalis W83]
Length = 405
Score = 301 bits (772), Expect = 9e-80, Method: Composition-based stats.
Identities = 142/413 (34%), Positives = 188/413 (45%), Gaps = 73/413 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA + RD+ +L+V I D + S L L S +V N
Sbjct: 9 IADYDYPLPEERIAKHALPQRDACKLLVYDKG-----EIKDAVFSQLSEVLPSGSMLVRN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NT+VI A+L + I VSP +W +K +
Sbjct: 64 NTRVIRARLLFRKS-----TGATIEVFCLEPVSPAQYELSLTARGSCTWHCMVGNAKRWR 118
Query: 111 KGDI-LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
D+ + S G S L D G I L + + + G +P+PPY+
Sbjct: 119 SDDLQMEIPSPQGGSILLTASHDPAADGCIRLSWENDHYTFGEILEMAGILPIPPYLN-- 176
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
R + D YQT YAK GSVAAPTAGLHFT RL + G V VTLHVGAGTF P
Sbjct: 177 RDTEEEDLETYQTVYAKNLGSVAAPTAGLHFTEEEFERLRAQGTPVVDVTLHVGAGTFRP 236
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------- 278
VK E +H MH E+ I+ + +AL + IV+VGTTS+R LE+
Sbjct: 237 VKSETIGEHRMHRELIVIERSSLEALRDWQGS---IVAVGTTSVRTLESLYWLGRSLSSA 293
Query: 279 --ATTEDGIINPWSGF-------------------------------TNIFITPGYRFRA 305
+ E +N W + T I I PGYR+R
Sbjct: 294 SHTSQESLKVNQWEAYENEDVALSRSETIRIILDWMDEQGVETLIFPTEILIAPGYRYRM 353
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
VD +++NFH P+STLL+LVSAF G E K +Y HA+ YRF SYGD SLL
Sbjct: 354 VDAMITNFHQPRSTLLLLVSAFIG-ENWKAVYHHALESGYRFLSYGDGSLLIP 405
>gi|255321392|ref|ZP_05362552.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter showae RM3277]
gi|255301545|gb|EET80802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter showae RM3277]
Length = 342
Score = 301 bits (772), Expect = 9e-80, Method: Composition-based stats.
Identities = 126/359 (35%), Positives = 190/359 (52%), Gaps = 32/359 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+DLPP IA P FP+++ARL+V IS DLP L D I+FN
Sbjct: 10 LDAYDYDLPPELIANFPTFPKENARLLVYER---ASEKISHLKFGDLPKILPPCD-IIFN 65
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A++ G + E L+ ++ +SVY + ++ G IL+F
Sbjct: 66 DTKVVKARIFGKKDS-----GGETELLLNSPLADAKFSVYIK--GKVRAGSILNFGE--- 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGI-----ELERQISLVGTIPLPPYIARKRPIDARDY 177
L A V + + G + FS +G L + +S +G +PLPPYI R D
Sbjct: 116 --NLTAEVCELFEDGSRTVKFSQNGELLDTAALYKILSHIGHVPLPPYIK--RSDTKDDE 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +AK +G+VAAPTA LHF+ +++RL + ++ ++TLHVGAGTF V+ ED
Sbjct: 172 SWYQSVFAKNEGAVAAPTASLHFSDEMIARL-AKDREIAYLTLHVGAGTFKGVESEDITQ 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E I T + I+ VGTT R +E SG +F+
Sbjct: 231 HKMHAEFYDIPQDTQNLIR----SNRPILGVGTTVTRCVEEFARSGKS----SGECRLFL 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ + L++NFHLPKSTL+MLV++F G+ +T ++Y+ A+ Y+FYSYGD L+
Sbjct: 283 NLNNKPIRQNYLLTNFHLPKSTLIMLVTSFVGLRQTMRIYKTAVEQKYKFYSYGDAMLV 341
>gi|182413854|ref|YP_001818920.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Opitutus
terrae PB90-1]
gi|177841068|gb|ACB75320.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Opitutus
terrae PB90-1]
Length = 398
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 128/401 (31%), Positives = 184/401 (45%), Gaps = 60/401 (14%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
FD++LPP IA P RD +RL+V+ ++ H ++LP FL + D + N
Sbjct: 12 TDLFDYELPPRLIAQTPAERRDRSRLLVIDRATR---KLAHHTFAELPKFLRAGDTLFRN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHM---------------------------RVS 95
N V+ A+L+ R E+ C L R
Sbjct: 69 NAAVLPARLHARR-----PTGGEVECFLLQQEPTAGSGTGVPPVIQPAEAIQSSRAGRPC 123
Query: 96 PNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSI-SGIELERQI 154
W +P + + G S+ +++K G + F+ +
Sbjct: 124 HEIWRCLIKPGRRLAVGATFAHPSKA----FTGEILEKHADGTAQVRFTTSDHRPITAVA 179
Query: 155 SLVGTIPLPPYIARKRPIDARDYVD------YQTTYAK--IQGSVAAPTAGLHFTSNLLS 206
+ +G +PLPPYI R D YQT YA Q +VAAPTAGLHFT LL+
Sbjct: 180 NELGDVPLPPYIERDPHAPDHDRQRQLDLSRYQTVYANAARQVAVAAPTAGLHFTPELLA 239
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
L ++G++ VTLHVG GTF P+ ++H +H E+ I A T +AL + GR +
Sbjct: 240 ALTAMGVRTADVTLHVGLGTFQPISTATIEEHRIHRELYEIPASTQRALFPPLT--GRRI 297
Query: 267 SVGTTSLRLLETATTEDGIINPWSG----FTNIFITPGYRFRAVDILMSNFHLPKSTLLM 322
+VGTTS+R +E ++ P IFI P F VD L++NFH P+STLL
Sbjct: 298 AVGTTSVRTIEDFLSQHSTPRPEEAAHVAEAGIFIYPPREFCGVDALITNFHQPRSTLLC 357
Query: 323 LVSAFC------GIEETKKMYQHAISHAYRFYSYGDTSLLF 357
LVSAF GI +++Y AI+ YRF+SYGD L+
Sbjct: 358 LVSAFLTPGSTDGIAWIREIYAEAIAREYRFFSYGDAMLIL 398
>gi|254442307|ref|ZP_05055783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Verrucomicrobiae bacterium DG1235]
gi|198256615|gb|EDY80923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Verrucomicrobiae bacterium DG1235]
Length = 357
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 135/372 (36%), Positives = 181/372 (48%), Gaps = 30/372 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M F + LP RIA P RD++RL+VVH + I SDLP FL + D+I
Sbjct: 1 MDSSLFAYHLPDERIAQEPASARDASRLLVVHRS---ERRIEHRRFSDLPEFLGARDSIF 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFF 118
NN +V+ A+L R + + C L S + W RP K + G
Sbjct: 58 RNNARVLPARLYAQR-----QTGGAVECLLLRPASNDGLEWWTLIRPGKKLPVGSTF--- 109
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPPYI--ARKRPIDAR 175
A+V++K E + FS+ + +G +PLPPYI + D
Sbjct: 110 --ARDGFFSASVVEKNEKAEYRVRFSLERHASVPALADELGKMPLPPYIARDKSDDRDDS 167
Query: 176 DYVDYQTTYAKIQGSVAA--PTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YA SVAA PTAGLHFT ++ +L + G + + LHVG GTF P++ E
Sbjct: 168 DKERYQTVYAAADKSVAAAAPTAGLHFTPAIVEKLAAQGATFHDLALHVGMGTFKPIQCE 227
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS--G 291
+DH +H EI I T A+ R V VGTTS+R +E + I + G
Sbjct: 228 RVEDHQIHREIYEIPESTQNAIR--TPNSRRRVCVGTTSVRSIEDYLAKSTTIQTGNFVG 285
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAISHAY 345
+IFI P FR VD L++NFH P STLL LVS+F GI K++Y AI+ Y
Sbjct: 286 EADIFIYPPRDFRGVDALITNFHQPHSTLLCLVSSFLDPNGTDGIAWLKEIYAEAINMKY 345
Query: 346 RFYSYGDTSLLF 357
RF SYGD L+
Sbjct: 346 RFLSYGDAMLIL 357
>gi|251771668|gb|EES52243.1| Queuosine biosynthesis protein [Leptospirillum ferrodiazotrophum]
Length = 356
Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 131/357 (36%), Positives = 184/357 (51%), Gaps = 14/357 (3%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++D++LP RI L P RD +RL VV V+ LP+ L D +V N+
Sbjct: 10 DYDYELPEERIRLVPPPRRDLSRLAVVPRRGDGGRPPFLASSVAHLPSLLAPGDLLVAND 69
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++V+ A+ R + I + + K +K L F G+
Sbjct: 70 SRVVPAR-----TRARTSRGRAIDLLVLGPFDSGTAGTVRFLGKGLKGEKRLALFG--GR 122
Query: 124 SRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+ D+ G E L + G +PLPPYIAR+R D D YQT
Sbjct: 123 GVLDGICYDEALEC---FSGEYRGEEALVALLEAQGEMPLPPYIARRRSADGSDRERYQT 179
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA++ GSVAAPTAGLH LL RL G++ VTLHVG GTF + +DH MH
Sbjct: 180 VYARVPGSVAAPTAGLHLGEELLDRLREKGVERASVTLHVGVGTFRGLSEGPVEDHRMHE 239
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW-SGFTNIFITPGY 301
E + TA+A+ ++RGGR+V+VGTTSLR LE+A I +G+T +++ PGY
Sbjct: 240 EWYVVPRETAEAIARTRARGGRVVAVGTTSLRALESAFALGEIPPEGRAGWTRLYVRPGY 299
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIE-ETKKMYQHAISHAYRFYSYGDTSLLF 357
RF A D L +NFH P+STLL+LV AF G + +++Y+ A+ + F SYGD L+
Sbjct: 300 RFLAADALFTNFHTPRSTLLVLVDAFLGGDGRWREIYRRALEEGFFFLSYGDALLIL 356
>gi|224026756|ref|ZP_03645122.1| hypothetical protein BACCOPRO_03513 [Bacteroides coprophilus DSM
18228]
gi|224019992|gb|EEF77990.1| hypothetical protein BACCOPRO_03513 [Bacteroides coprophilus DSM
18228]
Length = 405
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 128/409 (31%), Positives = 197/409 (48%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L+V +S+ + LP +L + + ++F
Sbjct: 8 KISDYNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSETRFTSLPDYLEAGELMIF 62
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + S +W K K+G +
Sbjct: 63 NNTKVIQARLHFRKETGALIEIFCLEPIQPNDYVLNFQQTSHAAWLCMIGNLKKWKEGSL 122
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G + L AT + T + + I + + G +P+PPY+ R
Sbjct: 123 HKEMNVKGHTITLTATRGECRGTSHWVDFTWDNPEITFADILEVFGELPIPPYLN--RET 180
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L L G+ + VTLHVGAGTF PVK
Sbjct: 181 QESDKETYQTVYSKIKGSVAAPTAGLHFTERVLQALRDKGVDLEEVTLHVGAGTFKPVKS 240
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E ++ T + L + GG+ ++VGTTS+R LE+ A
Sbjct: 241 EEIEGHEMHTEYISVNRQTIEKLIA---HGGKAIAVGTTSVRTLESLYYIGVTIASHPDA 297
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
E+ + W + T I I PGY + V +
Sbjct: 298 GQEELHVRQWQPYETHPTMTTVESLQQILDYMKRHELEALHTSTQIIIAPGYTYHIVQKM 357
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 358 VTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 405
>gi|311746512|ref|ZP_07720297.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
gi|311302533|gb|EFQ79227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
Length = 405
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 133/418 (31%), Positives = 199/418 (47%), Gaps = 78/418 (18%)
Query: 1 MM-----VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNS 55
M +K +++ LP RIA P+ RDS++L++ I ++P + S
Sbjct: 3 MKIPEIDLKAYEYTLPEDRIAKFPLEKRDSSKLLLYKNKS-----IQHLQFYNIPELIPS 57
Query: 56 NDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRV-------------SPNSWSVY 102
+V+N+TKVI A+L R I L V P +W
Sbjct: 58 ESLLVYNDTKVIPARLIFQRV-----TGARIEIFLLQPVAPTTVIPEIMLAKHPVTWETM 112
Query: 103 ARPSKVIKKGDILH--FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
+K K+G+ LH D +L A ++DK N + + I + G +
Sbjct: 113 IGNAKKWKEGETLHGLVTLGDKNIKLSAQLVDK-NQRRVTFSWDDPEISFVDVVEGSGEV 171
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPY+ RK D YQT Y++ +G+VAAPTAGLHFT+ +LS+L G++ VTL
Sbjct: 172 PLPPYLNRKPVEDD--KNRYQTVYSEKEGAVAAPTAGLHFTNEILSKLKEKGVQTEQVTL 229
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HV AGTF P+K E +H MHSE I A+ + G+I++VGTTS+R LE+
Sbjct: 230 HVSAGTFQPIKAEKITEHPMHSEQVHIP---IGAIKNFIKHAGQIIAVGTTSVRTLESLY 286
Query: 281 -----------------------------------------TEDGIINPWSGFTNIFITP 299
E ++ G T IFI P
Sbjct: 287 WFGVRLIRKETLEFFIPKLYPYENIENLPSSVEAFQSILEHMEKHNLDTLVGSTEIFIFP 346
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+++ V L++NFH P STL++L++ G ++ KK+Y+ A+++ YRF SYGD+SLL+
Sbjct: 347 GYQYKVVKGLITNFHQPGSTLILLIATILG-DDWKKVYEEALNNNYRFLSYGDSSLLW 403
>gi|198276273|ref|ZP_03208804.1| hypothetical protein BACPLE_02465 [Bacteroides plebeius DSM 17135]
gi|198270715|gb|EDY94985.1| hypothetical protein BACPLE_02465 [Bacteroides plebeius DSM 17135]
Length = 422
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 127/409 (31%), Positives = 195/409 (47%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L+V IS+ + LP +L ++F
Sbjct: 25 KISDYNYPLPDERIAKFPLPVRDQSKLLVYQHG-----QISETHFTSLPDYLEPGTLMIF 79
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K+G +
Sbjct: 80 NNTKVIQARLHFRKETGALIEIFCLEPIKPNDYVLNFQQTQHAAWLCMIGNLKKWKEGPL 139
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G++ L AT + T + + + + G +P+PPY+ R
Sbjct: 140 HKEMTVKGKTLTLTATRGECHGTSHWIDFTWDNPEVTFADILEFFGELPIPPYLN--RET 197
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L+ L G+ + VTLHVGAGTF PVK
Sbjct: 198 QESDKETYQTVYSKIKGSVAAPTAGLHFTERVLNALKEKGVDLEEVTLHVGAGTFKPVKS 257
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E ++ T + L + GG V+VGTTS+R LE+ A
Sbjct: 258 EEIEGHEMHTEYISVNRGTIEKLLA---HGGEAVAVGTTSVRTLESLYYIGVTLSQHPDA 314
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
+ ++ + W + T I I PGY + V +
Sbjct: 315 SQQELHVQQWQPYETHPELSTTEALQQILDYMNRNQLDALHTSTQIIIAPGYNYHIVKKM 374
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 375 VTNFHQPQSTLLLLVSAFV-KGNWRPIYDYALAHDFRFLSYGDSSLLIP 422
>gi|189463178|ref|ZP_03011963.1| hypothetical protein BACCOP_03889 [Bacteroides coprocola DSM 17136]
gi|189430157|gb|EDU99141.1| hypothetical protein BACCOP_03889 [Bacteroides coprocola DSM 17136]
Length = 405
Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats.
Identities = 126/409 (30%), Positives = 198/409 (48%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L+V +S+ + + LP ++ +VF
Sbjct: 8 KISDYNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSETVFTSLPDYMEPGMLMVF 62
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K+G +
Sbjct: 63 NNTKVIQARLHFRKETGALIEIFCLEPIQPNDYVLNFQQTHHAAWLCMIGNLKKWKEGPL 122
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G++ L AT + T + + + + + G +P+PPY+ R
Sbjct: 123 HKEMTVKGKTITLTATRGECHGTSHWVDFTWDNPEVTFADILEVFGELPIPPYL--DRET 180
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L+ L G+ + VTLHVGAGTF PVK
Sbjct: 181 QESDKETYQTVYSKIKGSVAAPTAGLHFTERVLASLKEKGVDLEEVTLHVGAGTFKPVKS 240
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E ++ T + L + + V+VGTTS+R LE+ A
Sbjct: 241 EEIEGHEMHTEYISVNKSTIEKLIAHRGE---AVAVGTTSVRTLESLYYIGVTISQNPDA 297
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
+ E+ + W + T I I PGY ++ V +
Sbjct: 298 SQEELHVKQWQPYESDVTLSTIESLQCILDYMNRHNLDALHTSTQIIIAPGYEYKIVKRM 357
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF + K+Y +A++H +RF SYGD+SLL
Sbjct: 358 VTNFHQPQSTLLLLVSAFVKGD-WHKIYDYALAHDFRFLSYGDSSLLIP 405
>gi|29349381|ref|NP_812884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|298384910|ref|ZP_06994469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
gi|29341290|gb|AAO79078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|298262054|gb|EFI04919.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
Length = 406
Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats.
Identities = 129/409 (31%), Positives = 194/409 (47%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L+V +S+ + + LP +L +VF
Sbjct: 9 HISEYNYPLPDERIAKFPLAVRDQSKLLVYRHG-----EVSEDVFTSLPDYLPKGSLMVF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K G +
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGAL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G L AT + T + + + + + G +P+PPY+ R
Sbjct: 124 KREMTVKGFPITLTATRGECRGTSHWIDFSWDNPEVTFADILEVFGELPIPPYLN--RDT 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF PVK
Sbjct: 182 EESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLEALQEKGIDLEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E ++ T + L G V+VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVNRATIKKL---IDHDGCAVAVGTTSVRTLESLYHIGVTLAENPDA 298
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T E+ + W + T I I PGY+++ V +
Sbjct: 299 TEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHSSTQIIIAPGYQYKIVKAM 358
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 359 VTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|205374301|ref|ZP_03227100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
coahuilensis m4-4]
Length = 322
Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats.
Identities = 121/305 (39%), Positives = 172/305 (56%), Gaps = 17/305 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R +RLMV+ I + D+ L+ D +V
Sbjct: 1 MKVEDFDFYLPEELIAQTPLEERSKSRLMVIDKITGD---IKHRVFEDILYDLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ C L + + W +P+K +K G +L F
Sbjct: 58 LNDTRVLPARLYGVK----EETGAKVECLLLKQEEGDEWETLIKPAKRVKVGTVLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A + + + G ++ F GI + +G +PLPPYI Y
Sbjct: 111 -GDGRLKAECVAEKDHGGRMMRFIYDGI-FYEVLEELGEMPLPPYIRETLDD----RDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS AAPTAGLHFT +LL ++ G+ + F+TLHVG GTF PV VE ++H M
Sbjct: 165 QTVFAKERGSAAAPTAGLHFTEDLLKKIGEKGVHIAFITLHVGLGTFRPVSVESIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN VK RGGRI++VGTTS R LET A+ DG + SG+T+IFI P
Sbjct: 225 HAEFYQMTEGTARLLNEVKERGGRIITVGTTSTRTLETIASKYDGEFHEESGWTDIFIYP 284
Query: 300 GYRFR 304
GY F+
Sbjct: 285 GYEFK 289
>gi|154493611|ref|ZP_02032931.1| hypothetical protein PARMER_02951 [Parabacteroides merdae ATCC
43184]
gi|154086821|gb|EDN85866.1| hypothetical protein PARMER_02951 [Parabacteroides merdae ATCC
43184]
Length = 427
Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 125/409 (30%), Positives = 195/409 (47%), Gaps = 64/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++FD+ LP RIA P+ RD ++L++ +S+ + + +L +VF
Sbjct: 30 RIEDFDYPLPDERIAKFPLPKRDESKLLLY-----KEGKVSESIFKHITDYLPEGSLMVF 84
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+L + + E + + W+ K K+G +
Sbjct: 85 NNTRVIQARLLFQKETGAKIEIFCLEPVEPHDYALVFQQTECCRWTCLVGNLKKWKEGLL 144
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPI 172
DG++ + + L+ F+ + G +P+PPY+ R
Sbjct: 145 KKEVQLDGETVILKAEKLQTCGDSYLIEFTWDHPTCTFADLLDAAGVLPIPPYLN--RET 202
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L+ + ++GI +TLHVGAGTF PVK
Sbjct: 203 EKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLAAIDALGIGREELTLHVGAGTFKPVKS 262
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E + H MH+E + + + + + G+I++VGTTS+R LE+ A
Sbjct: 263 ETIEGHEMHTEFISVRRSSIERIKNNL---GKIIAVGTTSVRTLESLYYMGVTLASNPDA 319
Query: 280 TTEDGIINPWSGF-------------------------------TNIFITPGYRFRAVDI 308
T ++ I+ W + T I I PGY F+ V
Sbjct: 320 TADELIVKQWMPYEETNNRLTADEALQNILDYLDRHQADKLVTATRIIIAPGYEFKIVRG 379
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF K +Y +A+ H +RF SYGD+SLL
Sbjct: 380 IVTNFHQPKSTLLLLISAFV-KGNWKNIYDYALRHDFRFLSYGDSSLLL 427
>gi|315920175|ref|ZP_07916415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
gi|313694050|gb|EFS30885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
Length = 406
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 128/414 (30%), Positives = 194/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 RISEYNYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDIFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G++ + G L A + T + + + + + G +P+PPY+
Sbjct: 119 KDGELKREMTVKGFPITLTAVRGECKGTSHWVDFSWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 --RDTEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGVILA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY+++
Sbjct: 294 DHPDATEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHTSTQIIIAPGYQYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRAIYDYALAHDFRFLSYGDSSLLMP 406
>gi|325300339|ref|YP_004260256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
gi|324319892|gb|ADY37783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
Length = 406
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 126/410 (30%), Positives = 196/410 (47%), Gaps = 63/410 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +++++LP RIA P+ RD ++L+V IS+ + LP ++ ++F
Sbjct: 8 HISDYNYNLPDERIAKFPLPVRDQSKLLVYR-----NGDISETRFTSLPDYVEPGTLMIF 62
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K+G +
Sbjct: 63 NNTKVIQARLHFRKETGALIEIFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKWKEGTL 122
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSI--SGIELERQISLVGTIPLPPYIARKRPI 172
+ GQ A + + F+ G+ + + G +P+PPY+ R
Sbjct: 123 TRRMTVKGQDITLAATRGEARGTSHWVDFTWDNPGVTFADILEMFGELPIPPYLN--RET 180
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L L + G + VTLHVGAGTF PVK
Sbjct: 181 QESDKETYQTVYSKIKGSVAAPTAGLHFTQRVLDALRAKGADLEEVTLHVGAGTFKPVKS 240
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + + + L + + G+ ++VGTTS+R LE+ A
Sbjct: 241 EEIEGHEMHTEYISVSKGSIEKLIAHE---GKALAVGTTSVRTLESLYYIGVTLSQHPDA 297
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
D + W + T I I PGY ++ V +
Sbjct: 298 QEADLHVRQWQPYETHPTLSTTEALKHILHYMERHRLDALHTSTQIIIAPGYEYKVVKRM 357
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
++NFH P+STLL+LVSAF + K++Y +A+SH +RF SYGD+SLL +
Sbjct: 358 ITNFHQPQSTLLLLVSAFVKGD-WKRIYDYALSHDFRFLSYGDSSLLINE 406
>gi|260171863|ref|ZP_05758275.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
Length = 417
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 125/409 (30%), Positives = 194/409 (47%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 20 RISEYNYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDIFTSLPEYLPQGSLMIF 74
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K G++
Sbjct: 75 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKWKDGEL 134
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G L A + T + + + + + G +P+PPY+ R
Sbjct: 135 KREMTVKGFPITLTAVRGECKGTSHWVDFSWDNPEVTFADILEVFGELPIPPYLN--RDT 192
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF PVK
Sbjct: 193 EESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGAGTFKPVKS 252
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E ++ T + L G ++VGTTS+R LE+ A
Sbjct: 253 EEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGVILADHPDA 309
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T E+ + W + T I I PGY+++ V +
Sbjct: 310 TEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHTSTQIIIAPGYQYKIVKAM 369
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 370 VTNFHQPQSTLLLLVSAFV-KGNWRAIYDYALAHDFRFLSYGDSSLLMP 417
>gi|223039644|ref|ZP_03609930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter rectus RM3267]
gi|222879027|gb|EEF14122.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter rectus RM3267]
Length = 342
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 123/360 (34%), Positives = 187/360 (51%), Gaps = 32/360 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LP IA P P++ ARL+V IS DLP L D I+FN
Sbjct: 10 LDAYDYELPQGLIANFPTLPKEDARLLVYER---AGEKISHLKFGDLPEILPPCD-IIFN 65
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A++ G + E L+ ++ +SVY + ++ G IL+F
Sbjct: 66 DTKVVKARIFGKKQS-----GGETELLLNSPLADGKFSVYIK--GKVRAGSILNFSE--- 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISG-----IELERQISLVGTIPLPPYIARKRPIDARDY 177
L A V + + G + FS +G L + +S +G +PLPPYI R D
Sbjct: 116 --NLTAEVCELFKDGSRTVKFSQNGRLLDAAALYKILSHIGHVPLPPYIK--RSDTKDDE 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +AK +G+VAAPTA LHF+ +++ L + ++ ++TLHVGAGTF V+ ED
Sbjct: 172 SWYQSVFAKNEGAVAAPTASLHFSDEMIAGL-AKDREIAYLTLHVGAGTFKGVESEDITR 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E I T +N ++ VGTT R +E SG +F+
Sbjct: 231 HKMHAEFYDIPQDTQNLIN----SDKPLLGVGTTVTRCVEEFARSGKA----SGECRLFL 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R + L++NFHLPKSTL+MLV++F G+ +T ++Y+ A+ Y+FYSYGD L+
Sbjct: 283 NLNNRPIRQNYLLTNFHLPKSTLIMLVTSFVGLRQTMRIYKTAVEQKYKFYSYGDAMLVI 342
>gi|294673506|ref|YP_003574122.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella ruminicola 23]
gi|294472055|gb|ADE81444.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella ruminicola 23]
Length = 405
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 126/408 (30%), Positives = 193/408 (47%), Gaps = 62/408 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L+V +S + +LP +L +VF
Sbjct: 9 RISDYNYPLPDERIAKFPIAQRDHSKLLVYR-----QGQVSHDVFYNLPEYLPKGALMVF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+++ + + + + +W K K+G +
Sbjct: 64 NNTKVIQARMHFRKDTGALIEVFLLEPAQPSDYELIFQTSEKCAWYCLVGNLKKWKEGTL 123
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISG-IELERQISLVGTIPLPPYIARKRPID 173
GQ + + + F +G I +G +P+PPY+ R
Sbjct: 124 RREIEIKGQQVVVTATRGPIHGTSHRIDFEWTGGFSFAEIIDAMGELPIPPYLN--RETQ 181
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI+ +TLHVGAGTF PVK E
Sbjct: 182 ESDKTTYQTVYSKIKGSVAAPTAGLHFTPEVLAAVDAHGIEREELTLHVGAGTFKPVKSE 241
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------AT 280
+ H MH+E + T + L + G ++VGTTS+R LE+ A+
Sbjct: 242 EIQGHEMHTEYISVRRDTIRKLLA---HDGCAIAVGTTSVRTLESLYYMGLKVMQNPEAS 298
Query: 281 TEDGIINPWSGF------------------------------TNIFITPGYRFRAVDILM 310
+D +N W + T I I PGY + V +L+
Sbjct: 299 EDDLHVNQWEPYDTDTQVSTVESLTALGAWMDAHGLEVLHSSTQIIIAPGYNYHIVKMLV 358
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+NFH P+STLL+LVSAF + K+Y +A+++ +RF SYGD+SLL
Sbjct: 359 TNFHQPQSTLLLLVSAFVKGD-WHKIYDYALANDFRFLSYGDSSLLIP 405
>gi|257439751|ref|ZP_05615506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
gi|257197771|gb|EEU96055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
Length = 274
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 113/278 (40%), Positives = 155/278 (55%), Gaps = 8/278 (2%)
Query: 80 NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEI 139
L +V + W A+P K ++ G + F G L A V + G
Sbjct: 5 QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF----GDGTLTAVVDETLEDGNK 60
Query: 140 LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLH 199
+ F L ++ G +PLPPYI ++ ++ YQT YAK GS AAPTAGLH
Sbjct: 61 FVTFYYDTETLYEKLDEFGKMPLPPYITKQLEDQSQ----YQTVYAKELGSAAAPTAGLH 116
Query: 200 FTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVK 259
FT L+ + S G+ + VTLHVG GTF PV+ ++ DH MHSE I TAQ + K
Sbjct: 117 FTPELMDTIRSKGVGIAEVTLHVGLGTFRPVQEDEISDHKMHSEWYSISEETAQRIRETK 176
Query: 260 SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKST 319
+ G R+++VGTTS R LE A + G I SG T+IF+ PG +F +D L++NFHLP+ST
Sbjct: 177 AAGHRVIAVGTTSCRTLEAAAAKYGEIKACSGNTSIFLYPGVKFNCIDGLITNFHLPEST 236
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L+MLVSA G E+T Y+ A+ YRF+S+GD L+
Sbjct: 237 LIMLVSALYGYEKTMAAYKVAVEEKYRFFSFGDAMLIL 274
>gi|110639383|ref|YP_679592.1| S-adenosylmethionine/tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
gi|110282064|gb|ABG60250.1| S-adenosylmethionine/tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
Length = 413
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 132/416 (31%), Positives = 187/416 (44%), Gaps = 73/416 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +++DLP RIA P+ RD ++L+V ISD S + L N +VF
Sbjct: 7 NIETYNYDLPVERIAEYPLAERDQSKLLVY-----KDDHISDKTFSSIVDELPRNTLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN-------------SWSVYARPSKV 108
NNT+V+ A+ + + W + +K
Sbjct: 62 NNTRVVQARFLFQ-----TPTGATVEIFSLEPAEGHGGPAESMSARGKVIWKCFVGNAKR 116
Query: 109 IKKGDILHFFSQDGQSRLEATVIDKWNTGEIL---LVFSISGIELERQISLVGTIPLPPY 165
K+ +++ + S L + +++ I SL+G +PLPPY
Sbjct: 117 WKQPELIREVQLENGSMLSFHARQIEQKADYYLIGFSWNLEDITFSEIFSLLGDLPLPPY 176
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ R +A D YQT YAK +GSVAAPTAGLHFT ++ RL GI+ VTLHVGAG
Sbjct: 177 MK--RKTEASDKERYQTVYAKHEGSVAAPTAGLHFTDAIMQRLAEKGIQKQEVTLHVGAG 234
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------- 278
TF PVK + +H MHSE ++ T + L + ++ VGTTS+R LE+
Sbjct: 235 TFKPVKTDSIKEHTMHSEYIHVNRATVELLK--NADNLQVTPVGTTSMRTLESLYWLGCK 292
Query: 279 ------------------------------------ATTEDGIINPWSGFTNIFITPGYR 302
N S T + I PGY
Sbjct: 293 LCSKAALTGKLLELTQWDAYELPALSLREAMEELLKYINTSSDKNALSAKTALLIKPGYE 352
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ D +++NFH PKSTLL LVSAF GIE K+Y A+ + YRF SYGD+SLLF+
Sbjct: 353 FKVCDAIITNFHQPKSTLLCLVSAFIGIESMNKVYHFALENDYRFLSYGDSSLLFK 408
>gi|291515347|emb|CBK64557.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Alistipes shahii WAL 8301]
Length = 403
Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats.
Identities = 131/413 (31%), Positives = 193/413 (46%), Gaps = 72/413 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ FD+DLP RIA P+ R +++L+V I++ +D+ L + + +VFN
Sbjct: 7 ISRFDYDLPDERIAKFPLAERSASKLLVWRGG-----EIAEKRFADIGDVLPAGELLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NTKVI A++ + I P +WS K K
Sbjct: 62 NTKVIRARIVMHKPS-----GARIEVFCLEPHDPADYERAFAVTGGCTWSCIVGNRKKWK 116
Query: 111 KGDI-LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+G + ++F L A +++ ++ + + + + +G IP+PPY+
Sbjct: 117 EGYVEINFERGGCAEHLRAWIVEDHGRECVVRFEWTAPMTFGQLLEYLGRIPIPPYLN-- 174
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
R + D YQT Y+K +GSVAAPTAGLHFT L+ + + G VTLHVGAGTF+P
Sbjct: 175 RESEEIDNTRYQTVYSKFEGSVAAPTAGLHFTPELIGEMKARGFAFEEVTLHVGAGTFLP 234
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------- 278
VK ED H MH+E + T L I +VGTTS+R LE+
Sbjct: 235 VKDEDAARHPMHTEHFEVRRATVVRLLEKWGH---ITAVGTTSVRTLESLAALAWRIRTA 291
Query: 279 ----ATTEDGIIN------PWSG---------------------FTNIFITP-GYRFRAV 306
A G +SG T I ITP Y FR V
Sbjct: 292 GTPDAGRVVGQWELYDIPAEFSGREALQELSGYMEREGLDRLKASTQIMITPLDYEFRIV 351
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+++NFH PKSTLL+LVSAF G + +++Y +A+ H +RF SYGD+S+L ++
Sbjct: 352 HNIVTNFHQPKSTLLLLVSAFVG-DGWRRIYDYALGHGFRFLSYGDSSVLLRE 403
>gi|167752859|ref|ZP_02424986.1| hypothetical protein ALIPUT_01120 [Alistipes putredinis DSM 17216]
gi|167659928|gb|EDS04058.1| hypothetical protein ALIPUT_01120 [Alistipes putredinis DSM 17216]
Length = 405
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 132/412 (32%), Positives = 191/412 (46%), Gaps = 72/412 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ FD+DLP RIA P+ R +++L+V IS+ D+ L +VFN
Sbjct: 10 IDRFDYDLPDERIAKYPLEERSASKLLVYERG-----EISERRFRDIGDILPEGTLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NTKVI A++ + I P WS K K
Sbjct: 65 NTKVIRARIIMHKPS-----GARIEVFCLEPHDPADYERAFAVKGSCRWSCIVGNLKKWK 119
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARK 169
+G ++ F +G++ + E ++ F + + + + +G IP+PPY+
Sbjct: 120 EGPLVIDFEYEGRAERMLAWREGEGGREQIVRFEWTADLTFGQLLEHLGRIPIPPYLN-- 177
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
R D YQT Y+K +GSVAAPTAGLHFT L+ R+ + G VTLHVGAGTF+P
Sbjct: 178 RESQEIDNTRYQTVYSKFEGSVAAPTAGLHFTPELIERMRTQGFSFEEVTLHVGAGTFLP 237
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------- 278
VK D H MH+E I + + L I +VGTTS+R LE+
Sbjct: 238 VKDRDAAAHPMHTEHFEIRRSSVERLLEKWDN---ITAVGTTSVRTLESLTALAWRIRTS 294
Query: 279 ----ATTEDGIINPWS---------------------------GFTNIFITP-GYRFRAV 306
A+ G + T I ITP GYRFR V
Sbjct: 295 GAPDASRVIGQWELYDLPEVFTGREALQVLSDYMVREGIEKLKAATQIMITPLGYRFRIV 354
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH PKSTLL+LVSA+ G ++ ++Y +A++H +RF SYGD+S+L +
Sbjct: 355 RNIVTNFHQPKSTLLLLVSAYVG-DDWHRIYDYALTHDFRFLSYGDSSVLMR 405
>gi|189463863|ref|ZP_03012648.1| hypothetical protein BACINT_00196 [Bacteroides intestinalis DSM
17393]
gi|189438813|gb|EDV07798.1| hypothetical protein BACINT_00196 [Bacteroides intestinalis DSM
17393]
Length = 409
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 132/412 (32%), Positives = 196/412 (47%), Gaps = 66/412 (16%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +S+ + LP++L + ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSEDRFTSLPSYLPAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + E + +W K K+G +
Sbjct: 64 NNTKVIQARLHFRKDTGALIEVFCLEPIEPNDYVLNFQQTEHAAWLCMIGNLKKWKEGTL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ GQ L AT + T + ++ I + + G +P+PPY+ R
Sbjct: 124 KREMTVKGQPITLTATRGECHGTSHWVDFRWNNPEITFADILEVFGELPIPPYLN--RDT 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF PVK
Sbjct: 182 QESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALKEKGIDLEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + T + L + G+ ++VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVSRGTIEKLIA---HDGKAIAVGTTSVRTLESLYHIGVTLLKNPDA 298
Query: 280 TTEDGIINPWSGF---------------------------------TNIFITPGYRFRAV 306
T E+ + W + T I I PGY ++ V
Sbjct: 299 TEEELHVRQWQPYETAEEAANITSVKALQAILDYLNHHKMETLHTSTQIIIAPGYDYKIV 358
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH P+STLL+LVSAF +K+Y A+ H +RF SYGD+SLL
Sbjct: 359 CAMVTNFHQPQSTLLLLVSAFV-KGNWRKIYDFALGHDFRFLSYGDSSLLIP 409
>gi|291276348|ref|YP_003516120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter mustelae 12198]
gi|290963542|emb|CBG39374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter mustelae 12198]
Length = 342
Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats.
Identities = 112/362 (30%), Positives = 175/362 (48%), Gaps = 25/362 (6%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA P+ ++ ARL+V I+ L F+ +
Sbjct: 1 MREFSLQSYDYALPQELIAKYPLERKEDARLLVYDRKSGG---ITHTHFDALFDFIPRDF 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+VFN+TKVI A++ G + +I H + + +K G+ +HF
Sbjct: 58 TLVFNDTKVIKARIFGEKGS-----GGKIELLYHKSLPDG---ALVQIRGRVKVGEHIHF 109
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G S ++D L +L +G IPLPPY+ R ++ D
Sbjct: 110 PH--GYSAKVCALLDHGMRIVEFLYHGRPIRDLAPLFESIGHIPLPPYLK--RADESADE 165
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +A G++AAPTA LHF+ + FVTLHVGAGTF+ V+ ED
Sbjct: 166 QEYQSVFATHHGAIAAPTASLHFSPRM-RDFALQHYPHAFVTLHVGAGTFLGVESEDIRG 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS--GFTNI 295
H +HSE ++ A + +I+ +GTT+LR +E + D + G +I
Sbjct: 225 HEIHSEELWVSAANLSLI----EGAKKILCIGTTALRSVEFLSQRDLLRQEGDYVGDCDI 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ G + L++NFHLPKS+L+MLV++ G++ K +Y AI+ YRFYSYGD L
Sbjct: 281 FLHCGNPPKKASALLTNFHLPKSSLIMLVASMVGLDTCKNLYAEAIAKKYRFYSYGDGML 340
Query: 356 LF 357
+
Sbjct: 341 IL 342
>gi|189913086|ref|YP_001964975.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|189913420|ref|YP_001964649.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
gi|167777762|gb|ABZ96062.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167781488|gb|ABZ99785.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 346
Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats.
Identities = 128/358 (35%), Positives = 178/358 (49%), Gaps = 18/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EFDF LP +IA P RD +RL++V D+ +L D +V+N
Sbjct: 4 LNEFDFHLPEEQIARFPAKNRDESRLLLVDRANETFKEAP--FFRDIRNWLKPGDVLVYN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFFSQ 120
TKV + R + + N WS + ++ G+ L
Sbjct: 62 ETKV-----SYRRVYLQVESGRIHEAIFLDTLEDNANIWSCILKNRAKLRLGENLWPVGF 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + LL + +L+ + GTIP+PPY+ RK D Y
Sbjct: 117 KEFPFV----YESKDNELSLLRSERTITDLD--FEVFGTIPIPPYLKRKAIEDD--KFRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GSVAAPTAGLHFT +L LI +GI+ V L VG GTF P+ E +
Sbjct: 169 QTIFAKKSGSVAAPTAGLHFTDSLKLELIQLGIQFVPVNLQVGYGTFRPLTTEQWQTKTL 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
H E I +A LNS K G RI++VGTTSLR+LET ++ G T+IF++P
Sbjct: 229 HKERYEITDESASQLNSAKKEGRRIIAVGTTSLRVLETVFDSQQQKFKVGLGQTDIFLSP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G +V L++NFHLPKS+LL+LVSAF YQ+A+ + +RFYSYGD+ LF
Sbjct: 289 GDNIESVHGLITNFHLPKSSLLLLVSAFANSRLVMNAYQYALQNQFRFYSYGDSMFLF 346
>gi|255037056|ref|YP_003087677.1| Queuosine biosynthesis protein [Dyadobacter fermentans DSM 18053]
gi|254949812|gb|ACT94512.1| Queuosine biosynthesis protein [Dyadobacter fermentans DSM 18053]
Length = 410
Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats.
Identities = 133/405 (32%), Positives = 185/405 (45%), Gaps = 61/405 (15%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ + +DLP RIA P+ RD ++LMV + +D+ + L +VFN
Sbjct: 11 LQSYTYDLPDDRIAKYPMEVRDQSKLMVYRGG-----ELGHLRFTDISSELPEKTLLVFN 65
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRV--------SPNSWSVYARPSKVIKKGDI 114
+TKVI A+ + + + L RV W K K GD
Sbjct: 66 DTKVIPARAHFKKETGAIIELLLLHPELPTRVINDAMLVTHACVWECMIGNKKRWKAGDS 125
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L Q + V ++ + +G+ + +G IPLPPY+ R +
Sbjct: 126 LSNVIQVNGFEVHLQVSYHDYERNLVRLTWDAGVTFLDLVKALGEIPLPPYLN--RDTEE 183
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA G+VAAPTAGLHFT + L GI F+TLHVGAGTF P+KVE
Sbjct: 184 PDKETYQTVYANHDGAVAAPTAGLHFTPRVFDELEKKGIGKAFLTLHVGAGTFQPIKVEK 243
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-------------- 280
+H MHSE T + +N + IV VGTTSLR LE+
Sbjct: 244 VTEHRMHSEQVVF---TRELINDLVQSVDHIVPVGTTSLRSLESLYWYGVKLFAGETTDF 300
Query: 281 ----------------------------TEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+ G ++ G T IFI PGYRFR +++N
Sbjct: 301 HIEKLYPYPWRETELPTAAQSLQAIADHMDAGGLHEIVGETEIFIFPGYRFRLCRGIITN 360
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+H P STL++LV+AF G + KK+Y A+S+ YRF SYGD+SLL+
Sbjct: 361 YHQPGSTLILLVAAFVGND-WKKIYSEALSNDYRFLSYGDSSLLW 404
>gi|160890857|ref|ZP_02071860.1| hypothetical protein BACUNI_03302 [Bacteroides uniformis ATCC 8492]
gi|317479715|ref|ZP_07938837.1| queuosine biosynthesis protein [Bacteroides sp. 4_1_36]
gi|156859856|gb|EDO53287.1| hypothetical protein BACUNI_03302 [Bacteroides uniformis ATCC 8492]
gi|316904085|gb|EFV25917.1| queuosine biosynthesis protein [Bacteroides sp. 4_1_36]
Length = 409
Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats.
Identities = 131/412 (31%), Positives = 200/412 (48%), Gaps = 66/412 (16%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + LP +L S ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLSVRDQSKLLLYRHG-----EVSEDRFTSLPEYLPSGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K+G +
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMVGNLKKWKEGML 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G+S L A + T + ++ + + + G +P+PPY+ R
Sbjct: 124 RREMTVKGKSLTLTAERGECHGTSHWINFRWNNPEVTFADILEVFGELPIPPYLN--RET 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L L + G+++ +TLHVGAGTF PVK
Sbjct: 182 QESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRNKGVELEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + T + L GG+ V+VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVSRNTLEKL---IVHGGKAVAVGTTSVRTLESLYHIGVTLLNNPEA 298
Query: 280 TTEDGIINPWSGF---------------------------------TNIFITPGYRFRAV 306
T ED ++ W + T I I PGY ++ V
Sbjct: 299 TEEDLHVHQWQPYEMSAKATATSAVEALQAIAAYLDRHSMEALHTSTQIIIAPGYEYKIV 358
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH P+STLL+LVSAF + K+Y +A++H +RF SYGD+SLL
Sbjct: 359 KAMVTNFHQPQSTLLLLVSAFV-HGDWPKIYNYALAHDFRFLSYGDSSLLIP 409
>gi|162447237|ref|YP_001620369.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acholeplasma laidlawii PG-8A]
gi|161985344|gb|ABX80993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acholeplasma laidlawii PG-8A]
Length = 282
Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats.
Identities = 120/296 (40%), Positives = 170/296 (57%), Gaps = 15/296 (5%)
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + I L + N+W +P+K IK G ++ F
Sbjct: 1 MNNTKVIPARLIGEKI----DTHAVIEVLLLKELEKNTWEALTKPAKKIKIGTVVSF--- 53
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ I + G + GI + +GT+PLPPYI K Y
Sbjct: 54 -GDGALKMECIGIKDEGIRIFKAIYEGI-FLEVLDALGTMPLPPYITEKLED----KSRY 107
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G++V +TLHVG GTF PV+V+D +H M
Sbjct: 108 QTVYAKYAGSAAAPTAGLHFTKELLEKIKAKGVQVLEITLHVGLGTFRPVQVDDVLEHQM 167
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I+ TA+ LN K G RI++VGTT++R LE+ + + + TNIFI PG
Sbjct: 168 HYESYEINEETARLLNQYKKEGKRIIAVGTTTVRTLESNYNDG--FHAGNYSTNIFIYPG 225
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ + +++NFHLPKSTL+ML+SAF E+ ++Y+ A+ YRF+S+GD+ +
Sbjct: 226 YQFKIIGAIITNFHLPKSTLIMLISAFYNREKVLEVYEDAVKKNYRFFSFGDSMFI 281
>gi|270295861|ref|ZP_06202061.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
gi|270273265|gb|EFA19127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
Length = 409
Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats.
Identities = 130/412 (31%), Positives = 199/412 (48%), Gaps = 66/412 (16%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + LP +L S ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLSVRDQSKLLLYRHG-----EVSEDRFTSLPEYLPSGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K+G +
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYALNFQQTEHTAWLCMVGNLKKWKEGML 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G+ L A + T + ++ + + + G +P+PPY+ R
Sbjct: 124 RREMTVKGKPLTLTAERGECHGTSHWVNFRWNNPEVTFADILEVFGELPIPPYLN--RET 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L L + G+++ +TLHVGAGTF PVK
Sbjct: 182 QESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRNKGVELEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + T + L GG+ V+VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVSRNTLEKL---IVHGGKAVAVGTTSVRTLESLYHIGVTLLNNPEA 298
Query: 280 TTEDGIINPWSGF---------------------------------TNIFITPGYRFRAV 306
T ED ++ W + T I I PGY ++ V
Sbjct: 299 TEEDLHVHQWQPYEMSAKATATSAVEALQAIVAYLDRHSMEALHTSTQIIIAPGYEYKIV 358
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH P+STLL+LVSAF + K+Y +A++H +RF SYGD+SLL
Sbjct: 359 KAMVTNFHQPQSTLLLLVSAFV-HGDWPKIYNYALAHDFRFLSYGDSSLLIP 409
>gi|118475238|ref|YP_892279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter fetus subsp. fetus 82-40]
gi|261885962|ref|ZP_06010001.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter fetus subsp. venerealis str. Azul-94]
gi|226736735|sp|A0RPZ6|QUEA_CAMFF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|118414464|gb|ABK82884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter fetus subsp. fetus 82-40]
Length = 339
Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats.
Identities = 117/355 (32%), Positives = 177/355 (49%), Gaps = 22/355 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LP IA P P++ ARL+V + +L L AI+FN
Sbjct: 7 LSSYDYKLPQDLIATAPTMPKEEARLLVYDRQK---DSVFHLKFKNLSEILPE-CAIIFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + EI L+ + + +S Y R +K G L F
Sbjct: 63 DTKVIKARIYGRKDS-----GAEIQMLLNQPLQNSLFSCYIR--GKVKVGTKLKFDLGVE 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
LE ++ E+ +S +G +PLPPYI R+ D + YQ+
Sbjct: 116 AEVLELKDDSSRIVKFKKNEQILNTSEIYNILSHIGHVPLPPYIKREDTPDD--EIWYQS 173
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK +G+VAAPTA LHF +L L + + ++TLHVGAGTF V+ D +H MHS
Sbjct: 174 IFAKNEGAVAAPTASLHFNDQMLDDL-NKTHDISYITLHVGAGTFKGVEHCDIREHKMHS 232
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I + +++ VGTT R +E GF ++F+ P +
Sbjct: 233 EFYCISKKAKNII----DSDIKLLGVGTTVTRCIEYYYRT----KQPKGFCDLFLHPDNK 284
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
D L++NFHLPKSTL+MLV++F G+E+T ++Y+ A+ + Y+FYSYGD L+
Sbjct: 285 PLRQDFLLTNFHLPKSTLIMLVASFIGLEKTMEIYKQAVENRYKFYSYGDGMLII 339
>gi|218262646|ref|ZP_03477020.1| hypothetical protein PRABACTJOHN_02699 [Parabacteroides johnsonii
DSM 18315]
gi|218223259|gb|EEC95909.1| hypothetical protein PRABACTJOHN_02699 [Parabacteroides johnsonii
DSM 18315]
Length = 406
Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats.
Identities = 122/409 (29%), Positives = 189/409 (46%), Gaps = 64/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++FD+ LP RIA P+ RD ++L++ +S+ + + +L +VF
Sbjct: 9 RIEDFDYPLPDERIAKFPLSKRDESKLLLY-----KEGKVSESIFKHITDYLPDGSLMVF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+L + + E + + W+ K K+G +
Sbjct: 64 NNTRVIQARLLFQKETGAKIEIFCLEPVEPHDYALVFQQTECCRWTCLVGNLKKWKEGVL 123
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPI 172
++ + + L+ F+ + G +P+PPY+ R
Sbjct: 124 KKEVQFGDETVILKAEKLQTCGDSHLIEFTWDHPTCTFADLLDAAGVLPIPPYLN--RET 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI +TLHVGAGTF PVK
Sbjct: 182 EKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLAAIDARGIGREELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG-------- 284
E + H MH+E + + + + + G+I++VGTTS+R LE+ G
Sbjct: 242 ETIEGHEMHTEFISVRRSSIERIKNNL---GKIIAVGTTSVRTLESLYYMGGTLASNPDA 298
Query: 285 --------IINPWS--------GF--------------------TNIFITPGYRFRAVDI 308
P+ G T I I PGY F+ V
Sbjct: 299 TAEELIVKQWMPYDEMNNKLTAGEALQNILDYLDRHQADKLVTATRIIIAPGYEFKIVRG 358
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF + K +Y +A+ H +RF SYGD+SLL
Sbjct: 359 IVTNFHQPKSTLLLLISAFVKGD-WKNIYDYALGHEFRFLSYGDSSLLL 406
>gi|124002643|ref|ZP_01687495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
gi|123991871|gb|EAY31258.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
Length = 415
Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats.
Identities = 134/414 (32%), Positives = 197/414 (47%), Gaps = 77/414 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L+V I DLP L ++ +VFN
Sbjct: 14 LTDYNYTLPEERIAKSPLMQRDQSKLLVY-----QSGNIQHQHFYDLPQHLPADTMLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVIK 110
NTKVI A+L + I L +P+ W +
Sbjct: 69 NTKVIPARLYFQK-----PTGALIEVFLLKPEAPHEIAAAMHTGNGCIWHCMIGNKRKWN 123
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
KG IL +G L+A + D ++ S + +++ G +PLPPY+ R
Sbjct: 124 KGLILEQVLPNGL-VLKAELTDSEKQWV-RFEWNNSHVSFAEVLAMTGELPLPPYLK--R 179
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+D YQT Y+K +G+VAAPTAGLHFT ++S+L GI+ F+TLHV AGTF PV
Sbjct: 180 KATQKDADQYQTVYSKFEGAVAAPTAGLHFTPEVISQLQDKGIQTEFLTLHVSAGTFQPV 239
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-------TED 283
KVE+ +H MHSE I + + G IV+VGTTS+R+LE+ E+
Sbjct: 240 KVENVIEHDMHSEQLVIHKQN---IEHLLHHSGNIVAVGTTSMRVLESVYWLGVRLLKEN 296
Query: 284 GIINPWS----------------------------------------GFTNIFITPGYRF 303
+ P + G T IFI P Y F
Sbjct: 297 YELLPGTPFQIDKLLPYQWENNDLPTRQEALQAILNYMNRQELGKLWGATEIFIFPRYEF 356
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ L++N+HLPK+TL++LV+AF G + +K+Y A++ YRF SYGD+SLL+
Sbjct: 357 KMCKGLITNYHLPKTTLILLVAAFVGND-WEKIYNEALAKDYRFLSYGDSSLLW 409
>gi|313158857|gb|EFR58237.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Alistipes sp. HGB5]
Length = 403
Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats.
Identities = 135/412 (32%), Positives = 193/412 (46%), Gaps = 72/412 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EFD+DLP RIA P+ R +++L+V I + +D+ L +VFN
Sbjct: 8 INEFDYDLPDGRIAKFPLAERSASKLLVYRGG-----EIGEAHFADIGDVLPEGQLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NTKVI A++ + I P WS K K
Sbjct: 63 NTKVIRARIIMHKPS-----GARIEVFCLEPHDPADYERAFAVVGRCEWSCIVGNLKKWK 117
Query: 111 KGDI-LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+G + ++F + L A +++ + + + + + +G IP+PPY+
Sbjct: 118 EGYVEINFEHEGRPEHLRAWLVENRGREHTVRFEWSAAMTFGQLLEYLGRIPIPPYLN-- 175
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
R + DY YQT Y+K +GSVAAPTAGLHFT L+ + + G VTLHVGAGTF+P
Sbjct: 176 RESEEIDYTRYQTVYSKFEGSVAAPTAGLHFTPELIEGMKARGFGFEEVTLHVGAGTFLP 235
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------- 278
VK +D H MH+E + L GRI +VGTTS+R LE+
Sbjct: 236 VKDDDAARHPMHTEHFEVRRAAVARLLEKW---GRITAVGTTSVRTLESLTALAWRIRTA 292
Query: 279 ----ATTEDGIIN------PWSGF---------------------TNIFITP-GYRFRAV 306
A G +SG T I ITP GY FR V
Sbjct: 293 GTPDAERVVGQWELYDVPAEFSGREALETLLKYMDEKGLERIKAATQIMITPLGYEFRIV 352
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH PKSTLL+LVSAF G + K++Y++A+ H +RF SYGD+S+L +
Sbjct: 353 RNIVTNFHQPKSTLLLLVSAFVGGD-WKRIYEYALGHGFRFLSYGDSSVLMR 403
>gi|153807380|ref|ZP_01960048.1| hypothetical protein BACCAC_01658 [Bacteroides caccae ATCC 43185]
gi|149129742|gb|EDM20954.1| hypothetical protein BACCAC_01658 [Bacteroides caccae ATCC 43185]
Length = 406
Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats.
Identities = 126/409 (30%), Positives = 195/409 (47%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L+V +++ + + LP +L ++F
Sbjct: 9 HISEYNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVTEDIFTSLPEYLPKGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K G +
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGTL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G L AT + T + ++ + + + G +P+PPY+ R
Sbjct: 124 KREMTVKGFPITLTATRGECKGTSHWVDFAWNNPEVTFADILEVFGELPIPPYLN--RNT 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF PVK
Sbjct: 182 EESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLEALQEKGIDLEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E ++ T + L G ++VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVNRNTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGVTLADHPDA 298
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T ++ + W + T I I PGY+++ V +
Sbjct: 299 TEQELHVRQWQPYEKYDQIPPVVSLQKILGYLDRNGLEALHTSTQIIIAPGYQYKIVKAM 358
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 359 VTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALSHDFRFLSYGDSSLLIP 406
>gi|323345330|ref|ZP_08085553.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
gi|323093444|gb|EFZ36022.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
Length = 404
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 135/414 (32%), Positives = 200/414 (48%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L+V +SD L +LP +L +VF
Sbjct: 7 HISDYNYQLPDERIAKFPISQRDHSKLLVY-----KHGEVSDDLFYNLPEYLPKGALMVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNTKVI A+++ + +I L V P SW K
Sbjct: 62 NNTKVIQARIHFRKE-----TGAQIEVFLLEPVDPTDYELMFQTSEHCSWLCMIGNLKKW 116
Query: 110 KKGDILHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + F +G L A +++ TG + ++ + + + VG +P+PPY+
Sbjct: 117 KEGILKRDFEINGHRLTLIAARKEEYGTGHWVDFSWNNNKVSFAEILETVGELPIPPYLN 176
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R D YQT Y+KI+GSVAAPTAGLHFT ++L L + GI +TLHVGAGTF
Sbjct: 177 --RDTQESDKTTYQTVYSKIKGSVAAPTAGLHFTDSVLKDLDTHGIDREELTLHVGAGTF 234
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------A 279
PVK ++ + H MH+E + T + L + ++VGTTS+R LE+ A
Sbjct: 235 KPVKSDEIEGHKMHTEYICVHRQTLEKL---LKHDCQAIAVGTTSVRTLESLYYMGVYLA 291
Query: 280 TTED--------GIINPWS---------------------------GFTNIFITPGYRFR 304
D G P+ T I I PGY ++
Sbjct: 292 AHPDATEEELHVGQWTPYETKAMLTPMEAIKNVLSYLDRNGLSALHSSTQIIIAPGYEYK 351
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +L++NFH P+STLL+LVSAF + + +Y +A+SH +RF SYGD+SLL
Sbjct: 352 IVKMLVTNFHQPQSTLLLLVSAFV-YGDWRTIYNYALSHDFRFLSYGDSSLLIP 404
>gi|34557262|ref|NP_907077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Wolinella
succinogenes DSM 1740]
gi|34482978|emb|CAE09977.1| RIBOSYLTRANSFERASE-ISOMERASE [Wolinella succinogenes]
Length = 343
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 118/369 (31%), Positives = 172/369 (46%), Gaps = 38/369 (10%)
Query: 1 MMVKE------FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M + +D++LP IA P+ P++ ARL+V + I S+ F+
Sbjct: 1 MKSNDPFSLLTYDYELPEELIASHPIHPKNQARLLVYNRKDGS---ILHTHFSEFERFIP 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
IVFN+TKVI A+ G + L + + +K G
Sbjct: 58 QEALIVFNDTKVIKARFFGKKESGGG-------VELLYHKPLGVERFWVQIKGRVKLGQT 110
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISG------IELERQISLVGTIPLPPYIAR 168
L A ++ G + F +L + G +PLPPYI
Sbjct: 111 LLLAEG-----WRAQILALGEGGFREVSFWDERGVKVELAQLLLFLERQGHVPLPPYIK- 164
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
R A D V+YQ+ +AK +G++AAPTA LHF + RL FVTLHVGAGTF+
Sbjct: 165 -RTDTALDEVEYQSVFAKHEGAIAAPTASLHFEETDMVRLKER-FDHAFVTLHVGAGTFL 222
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
V+ ED +H MH E FI +AQ + +I+++GTT+ R +E
Sbjct: 223 GVESEDIRNHSMHKERYFISESSAQKIKQAS----QILAIGTTAARTIEYYVRTSKK--- 275
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
G ++F+ PG L++NFHLP+STLLMLVSAF +E +++Y A+ YRF+
Sbjct: 276 -EGECDLFLHPGNPPLKTTALLTNFHLPQSTLLMLVSAFITPKECQRVYAQALKERYRFF 334
Query: 349 SYGDTSLLF 357
SYGD L+
Sbjct: 335 SYGDGMLIL 343
>gi|212690635|ref|ZP_03298763.1| hypothetical protein BACDOR_00122 [Bacteroides dorei DSM 17855]
gi|237725170|ref|ZP_04555651.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D4]
gi|265754309|ref|ZP_06089498.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
gi|212666735|gb|EEB27307.1| hypothetical protein BACDOR_00122 [Bacteroides dorei DSM 17855]
gi|229436436|gb|EEO46513.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
dorei 5_1_36/D4]
gi|263235018|gb|EEZ20573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
Length = 405
Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats.
Identities = 131/409 (32%), Positives = 196/409 (47%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +++ + + LP +L S + ++F
Sbjct: 8 KISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVNEDVFTSLPQYLESGELMIF 62
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + SW K KKG +
Sbjct: 63 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLSFQQTRRCSWLCMIGNLKKWKKGTL 122
Query: 115 LHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
G Q L AT + T + + I + ++G +P+PPY+ R
Sbjct: 123 SRVVDVKGKQIVLSATRGECRGTSHWIDFSWDDDSITFADLLEVIGELPIPPYLN--RET 180
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +TLHVGAGTF PVK
Sbjct: 181 QESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREELTLHVGAGTFKPVKS 240
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + T + L + G+ ++VGTTS+R LE+ A
Sbjct: 241 EEIEGHEMHTEYISVSKHTIEKLIA---HNGKAIAVGTTSVRTLESLYYIGVLIHHNPDA 297
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
+ + W + T I I PGY+++ V +
Sbjct: 298 AQNELHVQQWMPYEDKNELTPVEALQQILDYLHRHEMEALHSSTQIIIAPGYQYKIVRKM 357
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF +K+Y +A+ H +RF SYGD+SLL
Sbjct: 358 VTNFHQPQSTLLLLVSAFV-RGNWRKIYDYALEHDFRFLSYGDSSLLIP 405
>gi|237709677|ref|ZP_04540158.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
gi|229456313|gb|EEO62034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
Length = 405
Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats.
Identities = 131/409 (32%), Positives = 196/409 (47%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +++ + + LP +L S + ++F
Sbjct: 8 KISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVNEDVFTSLPQYLESGELMIF 62
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + SW K KKG +
Sbjct: 63 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLSFQQTRRCSWLCMIGNLKKWKKGML 122
Query: 115 LHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
G Q L AT + T + + I + ++G +P+PPY+ R
Sbjct: 123 SRVVDVKGKQIVLSATRGECRGTSHWIDFSWDDDSITFADLLEVIGELPIPPYLN--RET 180
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +TLHVGAGTF PVK
Sbjct: 181 QESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREELTLHVGAGTFKPVKS 240
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + T + L + G+ ++VGTTS+R LE+ A
Sbjct: 241 EEIEGHEMHTEYISVSKHTIEKLIA---HNGKAIAVGTTSVRTLESLYYIGVLIHHNPDA 297
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
+ + W + T I I PGY+++ V +
Sbjct: 298 AQNELHVQQWMPYEDKNELTPVEALQQILDYLHRHEMEALHSNTQIIIAPGYQYKIVRKM 357
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF +K+Y +A+ H +RF SYGD+SLL
Sbjct: 358 VTNFHQPQSTLLLLVSAFV-RGNWRKIYDYALEHDFRFLSYGDSSLLIP 405
>gi|253570272|ref|ZP_04847681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
gi|251840653|gb|EES68735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
Length = 406
Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats.
Identities = 128/409 (31%), Positives = 193/409 (47%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ L RIA P+ RD ++L+V +S+ + + LP +L +VF
Sbjct: 9 HISEYNYPLSDERIAKFPLAVRDQSKLLVYRHG-----EVSEDVFTSLPDYLPKGSLMVF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K G +
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGAL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G L AT + T + + + + + G +P+PPY+ R
Sbjct: 124 KREMTVKGFPITLTATRGECRGTSHWIDFSWDNPEVTFADILEVFGELPIPPYLN--RDT 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF PVK
Sbjct: 182 EESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLEALQEKGIDLEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E ++ T + L G V+VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVNRATIKKL---IDHDGCAVAVGTTSVRTLESLYHIGVTLAENPDA 298
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T E+ + W + T I I PGY+++ V +
Sbjct: 299 TEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHSSTQIIIAPGYQYKIVKAM 358
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 359 VTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|15611431|ref|NP_223082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori J99]
gi|7674181|sp|Q9ZM60|QUEA_HELPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|4154891|gb|AAD05941.1| S-ADENOSYLMETHIONINE TRNA RIBOSYLTRANSFERASE-ISOMERASE
[Helicobacter pylori J99]
Length = 345
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 189/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKGNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L ++ G +PLPPYI R
Sbjct: 114 -----DANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQNALEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + ++ +GTT+LR +E S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEILQESQE----VLCIGTTALRSVEYFKRLKNPNQE-SFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|308182554|ref|YP_003926681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori PeCan4]
gi|308064739|gb|ADO06631.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori PeCan4]
Length = 345
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 190/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L ++ G +PLPPYI R
Sbjct: 114 -----DAHYHAEVLELLHNGQRLIAFYGNKTPLNQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHIGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEILQESQE----ILCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|237719212|ref|ZP_04549693.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
gi|229451591|gb|EEO57382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
Length = 406
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 129/414 (31%), Positives = 192/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTVHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 --RDTEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|317013828|gb|ADU81264.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Gambia94/24]
Length = 345
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 190/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + E+ + + + + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTTEVFFHRFFKGN----TALIQIKGKIKAGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
A V++ + G+ L+ F + L ++ G +PLPPYI R
Sbjct: 114 -----DENYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEILQESQE----ILCIGTTALRSVEYFKRLKNPNQE-SFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|319899927|ref|YP_004159655.1| Queuosine biosynthesis protein [Bacteroides helcogenes P 36-108]
gi|319414958|gb|ADV42069.1| Queuosine biosynthesis protein [Bacteroides helcogenes P 36-108]
Length = 409
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 128/412 (31%), Positives = 193/412 (46%), Gaps = 66/412 (16%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + LP +L + ++F
Sbjct: 9 HISEFNYPLPDERIAKFPLSVRDQSKLLIYRHGN-----VSEDTFTSLPEYLTAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + E + +W K K+G +
Sbjct: 64 NNTKVIQARLHFRKDTGALIEVFCLEPIEPNDYALNFQQTEHAAWLCMIGNLKKWKEGVL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
G+ L A + T + + + + + G +P+PPY+ R
Sbjct: 124 KREMEVKGKMITLTAERGECHGTSHWVDFRWDNPEVTFADILEVFGELPIPPYLN--RET 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L L GI+ +TLHVGAGTF PVK
Sbjct: 182 QESDKETYQTVYSKIKGSVAAPTAGLHFTPQVLDALRDKGIETEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + T + L + + G+ ++VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVSRNTLKRLIAHE---GKAIAVGTTSVRTLESLYHIGVTLLNNPDA 298
Query: 280 TTEDGIINPWSGF---------------------------------TNIFITPGYRFRAV 306
D + W + T I I PGY +R V
Sbjct: 299 KETDLHVKQWQPYEIPAEATPILATDALQAIIRYLDRHDMETLHTSTQIIIAPGYEYRIV 358
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH P+STLL+LVSAF + +K+Y +A+ H +RF SYGD+SLL
Sbjct: 359 KAMVTNFHQPQSTLLLLVSAFV-HGDWRKVYNYALEHNFRFLSYGDSSLLIP 409
>gi|226736734|sp|A8Z6M6|QUEA_CAMC1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|158604995|gb|ABW74807.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter concisus 13826]
Length = 340
Score = 293 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 122/360 (33%), Positives = 192/360 (53%), Gaps = 31/360 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LP IA PV P++ ARL+V I + DL + + + A++FN
Sbjct: 7 ISSYDYFLPEMLIAKEPVLPKEEARLLVYLKKT---KEIKHYKFKDLASLIPDDAAVIFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKVI A++ G + L+ + N +SVY R + G +L+F
Sbjct: 64 NTKVIKARILGHKQS-----GGACEVMLNQPLGDNKFSVYVR--GRVSVGSVLNFADD-- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGI-----ELERQISLVGTIPLPPYIARKRPIDARDY 177
++ V++ + G ++ F+ +G+ +L ++ +G +PLPPYI R D
Sbjct: 115 ---IKVNVLELNDDGSRVVNFTKNGVILDTAQLFSELEKIGHVPLPPYIK--RADTKDDE 169
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +AK G+VAAPTA LHF+ +L R+ + + ++TLHVGAGTF V+ ++ +D
Sbjct: 170 SWYQSIFAKNSGAVAAPTASLHFSEQMLERIKAK-HDIAYITLHVGAGTFKGVECQNIND 228
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE + + + S I+ VGTT R +E SGF +F+
Sbjct: 229 HKMHSEFYELSEKAQEII----SSNKPILGVGTTVTRCVEEFARS----KQSSGFCKLFL 280
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ + L++NFHLPKSTL+MLV++F G+EET ++Y+ A+S YRFYSYGD L+
Sbjct: 281 NLNNKPIRQNYLLTNFHLPKSTLIMLVTSFIGLEETMRIYETAVSEKYRFYSYGDGMLVI 340
>gi|294775846|ref|ZP_06741346.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides vulgatus PC510]
gi|294450306|gb|EFG18806.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides vulgatus PC510]
Length = 405
Score = 293 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 131/409 (32%), Positives = 197/409 (48%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +S+ + + LP +L S + ++F
Sbjct: 8 KISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVSEDIFTSLPHYLESGELMIF 62
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + SW K K+G +
Sbjct: 63 NNTKVIQARLHFRKETGALIEVFCLEPVQPNDYVLNFQQTRQCSWLCMIGNLKKWKEGTL 122
Query: 115 LHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G Q L AT + T + + I + + G +P+PPY+ R
Sbjct: 123 SRIVNVKGKQIVLSATRGECKGTSHWIDFSWDDDTITFADLLEVAGELPIPPYLN--RET 180
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +TLHVGAGTF PVK
Sbjct: 181 QESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREELTLHVGAGTFKPVKS 240
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + T + L + G+ ++VGTTS+R LE+ A
Sbjct: 241 EEIEGHEMHTEYISVSKHTIEKLIA---HNGKAIAVGTTSVRTLESLYYIGVLISHNPDA 297
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T ++ + W + T I I PGY ++ V +
Sbjct: 298 TQDELHVQQWMPYEDKNDLTPVEALQQILDYLNRHEMEALHSSTQIIIAPGYTYKIVKKM 357
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF +++Y +A+ H +RF SYGD+SLL
Sbjct: 358 VTNFHQPQSTLLLLVSAFV-KGNWRRIYDYALGHDFRFLSYGDSSLLIP 405
>gi|298480286|ref|ZP_06998484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
gi|298273567|gb|EFI15130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
Length = 406
Score = 293 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 129/414 (31%), Positives = 192/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRE-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 --RDTEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|304382535|ref|ZP_07365030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
gi|304336366|gb|EFM02607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
Length = 406
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 131/414 (31%), Positives = 195/414 (47%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA PV PRD ++L+V I++ LP L +V+
Sbjct: 9 RIADYNYLLPEERIAKYPVTPRDHSKLLVYRHG-----AITEEKFYRLPQLLPQGALMVY 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNTKVI A+++ + +I L ++P +W K
Sbjct: 64 NNTKVIQARIHFRKD-----TGAQIEVFLLEPLTPADYELMFQSRRRCTWLCLVGNLKKW 118
Query: 110 KKGDILHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + S G+ L AT + +G + + + + VG +P+PPY+
Sbjct: 119 KEGTLTRTLSIQGEPFTLTATREEAMRSGHRITFEWDNPRVSFAEILEAVGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R D YQT Y+KI+GSVAAPTAGLHFT+++L L + GI+ VTLHVGAGTF
Sbjct: 179 --RATQESDKQTYQTVYSKIKGSVAAPTAGLHFTNDVLQALDTAGIEREEVTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED---- 283
PVK E+ + H MH+E + T + L K ++VGTTS+R LE+
Sbjct: 237 KPVKAEEIEGHEMHTEYICVHQETLEKLIMHKGH---AIAVGTTSVRTLESLYYIGLKLK 293
Query: 284 ------------GIINPWSGF---------------------------TNIFITPGYRFR 304
P+ T I I PGY ++
Sbjct: 294 ANPQLSEEELHVNQWEPYEQEATLTPVEAIIRVLDYLYRNQLKTLHTSTQIIIAPGYEYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +L++NFH P+STLL+LVSAF + +++Y +A+ H +RF SYGD+SLL
Sbjct: 354 IVKMLITNFHQPQSTLLLLVSAFVKGD-WRRIYDYALDHDFRFLSYGDSSLLIP 406
>gi|217033322|ref|ZP_03438753.1| hypothetical protein HP9810_9g75 [Helicobacter pylori 98-10]
gi|216944263|gb|EEC23688.1| hypothetical protein HP9810_9g75 [Helicobacter pylori 98-10]
Length = 345
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFKHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LIVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DAHYYAEVLELLHNGQRLIAFYNNKTPLNQANILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + ++ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEVLCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNHLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|255690464|ref|ZP_05414139.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides finegoldii DSM 17565]
gi|260623913|gb|EEX46784.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides finegoldii DSM 17565]
Length = 406
Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats.
Identities = 127/409 (31%), Positives = 197/409 (48%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +++ + + LP +L ++F
Sbjct: 9 RISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVNEDIFTSLPDYLPKGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K G++
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGEL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G L AT + T + ++ + + + + G +P+PPY+ R
Sbjct: 124 KREMTVKGFPITLTATRGECRGTSHWVDFTWNNAEVTFADILEVFGELPIPPYLN--RNT 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI++ +TLHVGAGTF PVK
Sbjct: 182 EESDKETYQTVYSKIKGSVAAPTAGLHFTPQVLDALQEKGIELEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E ++ T + L G V+VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVNRSTIKKL---IDHDGCAVAVGTTSVRTLESLYHIGVTLAENPDA 298
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T E+ + W + T I I PGY ++ V +
Sbjct: 299 TEEELHVRQWQPYEKYDQIPPVVALQKILGYLDRHGMETLHTSTQIIIAPGYDYKIVKAM 358
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 359 VTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALSHDFRFLSYGDSSLLIP 406
>gi|167765254|ref|ZP_02437367.1| hypothetical protein BACSTE_03642 [Bacteroides stercoris ATCC
43183]
gi|167696882|gb|EDS13461.1| hypothetical protein BACSTE_03642 [Bacteroides stercoris ATCC
43183]
Length = 409
Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats.
Identities = 129/412 (31%), Positives = 200/412 (48%), Gaps = 66/412 (16%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +++ + + LP +L +N ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLPVRDQSKLLLYRHG-----EVTEDIFTSLPDYLPANSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K+G +
Sbjct: 64 NNTKVIQARLHFHKETGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKWKEGAL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G+ L A T + ++ I + + G +P+PPY+ R
Sbjct: 124 KREITVKGKPLTLTAERGACHGTSHWVDFRWNNPEITFADILEVFGELPIPPYLN--RET 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L L G+ + +TLHVGAGTF PVK
Sbjct: 182 QESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALREKGVALEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E ++ T + L + + G+ ++VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVNRSTLEKLVAHE---GKAIAVGTTSVRTLESLYHIGVTLLHNPNA 298
Query: 280 TTEDGIINPWSGF---------------------------------TNIFITPGYRFRAV 306
T ED + W + T I I PGY +R V
Sbjct: 299 TEEDLHVKQWQPYETALETAATPAVDALQAIIAYLDRHHMETLHSSTQIIIAPGYEYRIV 358
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 359 KAMVTNFHQPQSTLLLLVSAFL-HGDWRKIYDYALAHDFRFLSYGDSSLLIP 409
>gi|87125598|ref|ZP_01081443.1| Queuosine biosynthesis protein [Synechococcus sp. RS9917]
gi|86166898|gb|EAQ68160.1| Queuosine biosynthesis protein [Synechococcus sp. RS9917]
Length = 373
Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats.
Identities = 130/361 (36%), Positives = 181/361 (50%), Gaps = 12/361 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP RIA PV PR +ARL++V P + V D L D +V
Sbjct: 8 LLSSYDYQLPEERIAQAPVEPRHAARLLMVPPVDAPVEEARHRQVWDWQNALQPKDLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+ + R + W A+P K + GD + +Q
Sbjct: 68 NDTR-----VLRARLRVRRSGGGMAELLVLEPRGEGQWLCLAKPGKKLNPGDQVWLEAQV 122
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + +G ++ F + +E + G +PLPPYI R DA D
Sbjct: 123 QEPLPLQVLASDAASGGRIVQFPPGCEDAIAIEALLERYGEVPLPPYIDRH---DASDQE 179
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + LL L GI + VTLHVG GTF PV+ ED +
Sbjct: 180 RYQTRYAARPGAVAAPTAGLHLSDELLEALRGRGIALATVTLHVGLGTFRPVETEDLSEL 239
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII-NPWSGFTNIFI 297
+HSE + +A+ + ++RGGR+++VGTTS+R LE A G P ++ I
Sbjct: 240 SLHSEWVEVSPALVEAVAACRARGGRVIAVGTTSVRALEGAAAAGGGSLIPIRQPVDLVI 299
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF V L++NFHLPKS+LL+LVSA G E ++Y AI YRFYSYGD +
Sbjct: 300 QPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGRERLLQLYDAAIEQRYRFYSYGDAMWID 359
Query: 358 Q 358
Sbjct: 360 P 360
>gi|261837818|gb|ACX97584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 51]
Length = 345
Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats.
Identities = 124/365 (33%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEQVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DANYHAEVLELLHNGQRLIAFYDNKTPLNQANILKLLEQHGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+EI I + + L + I+ +GTT+LR +E
Sbjct: 226 KDIREHQIHTEILRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLKNPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|254884703|ref|ZP_05257413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|319642373|ref|ZP_07997027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
gi|254837496|gb|EET17805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|317385988|gb|EFV66913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
Length = 405
Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats.
Identities = 131/409 (32%), Positives = 196/409 (47%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +S+ + + LP +L S + ++F
Sbjct: 8 KISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVSEDIFTSLPHYLESGELMIF 62
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + SW K K+G +
Sbjct: 63 NNTKVIQARLHFRKETGALIEVFCLEPVQPNDYVLNFQQTRQCSWLCMIGNLKKWKEGTL 122
Query: 115 LHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G Q L AT + T + + I + + G +P+PPY+ R
Sbjct: 123 SRIVNVKGKQIVLSATRGECKGTSHWIDFSWDDDTITFADLLEVAGELPIPPYLN--RET 180
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +TLHVGAGTF PVK
Sbjct: 181 QESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREELTLHVGAGTFKPVKS 240
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + T + L + G ++VGTTS+R LE+ A
Sbjct: 241 EEIEGHEMHTEYISVSKHTIEKLIA---HNGEAIAVGTTSVRTLESLYYIGVLISHNPDA 297
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T ++ + W + T I I PGY ++ V +
Sbjct: 298 TQDELHVQQWMPYEDKNDLTPVEALQQILDYLNRHEMEALHSSTQIIIAPGYTYKIVKKM 357
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF +++Y +A+ H +RF SYGD+SLL
Sbjct: 358 VTNFHQPQSTLLLLVSAFV-KGNWRRIYDYALGHDFRFLSYGDSSLLIP 405
>gi|317180719|dbj|BAJ58505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F32]
Length = 345
Score = 291 bits (746), Expect = 9e-77, Method: Composition-based stats.
Identities = 124/365 (33%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DAHYYAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ VGTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNHLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|260912482|ref|ZP_05919018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
gi|260633401|gb|EEX51555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
Length = 407
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 129/412 (31%), Positives = 191/412 (46%), Gaps = 66/412 (16%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+K++++DLP RIA P+ RD ++L+V + +S + S++ +L +VF
Sbjct: 7 RIKDYNYDLPDERIAKFPLPERDKSKLLVYNHG-----EVSQDVFSNITRYLPQGALMVF 61
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + SW K K G +
Sbjct: 62 NNTKVIQARLHFRKETGSLIEIFLLEPALPADYEQMFQTTGACSWYCLVGNLKKWKSGPL 121
Query: 115 LHFFSQDGQSRLEA-TVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKR 170
GQ ++ D + + F +G + I VG +P+PPY+ R
Sbjct: 122 TTTVEMPGQPSVQLSAERDMSCETALKIDFKWTGDDKLSFAELIDKVGELPIPPYLN--R 179
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D YQT Y+KI+GSVAAPTAGLHFT +L+ + GI +TLHVGAGTF PV
Sbjct: 180 NTQESDKTTYQTVYSKIKGSVAAPTAGLHFTQKVLADIDQHGIDREELTLHVGAGTFKPV 239
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------------ 278
K E+ + H MH+E I T + L V+VGTTS+R LE+
Sbjct: 240 KSEEIEGHAMHTEYVCIRRSTLEKLLQ---HNCEAVAVGTTSVRTLESLYYMGCKVKANP 296
Query: 279 --------------------------------ATTEDGIINPWSGFTNIFITPGYRFRAV 306
A + + T I I PGY+++ V
Sbjct: 297 NVSLDQLHVNQWEPYASTTTTITPAEAIGELIAYMDRNNLPSLHSSTQIIIAPGYQYKIV 356
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
L++NFH P+STLL+LVSAF G + K +Y++A+ + +RF SYGD+S+L
Sbjct: 357 KRLITNFHQPQSTLLLLVSAFVGGD-WKSIYRYALDNDFRFLSYGDSSILIP 407
>gi|237714439|ref|ZP_04544920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|262408269|ref|ZP_06084816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|294645388|ref|ZP_06723097.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CC 2a]
gi|294806152|ref|ZP_06765004.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides xylanisolvens SD CC 1b]
gi|229445603|gb|EEO51394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|262353821|gb|EEZ02914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|292639280|gb|EFF57589.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CC 2a]
gi|294446666|gb|EFG15281.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides xylanisolvens SD CC 1b]
Length = 406
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 130/414 (31%), Positives = 192/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ IS+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EISEDVFTSLPEYLLQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 --RDTEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|308061736|gb|ADO03624.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Cuz20]
Length = 345
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DANYHAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEILQKTQE----ILCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|253566303|ref|ZP_04843757.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
gi|251945407|gb|EES85845.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
Length = 406
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 123/409 (30%), Positives = 188/409 (45%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L + ++F
Sbjct: 9 RISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVSEDVFTSLPEYLPAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K G +
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMVGNLKKWKDGPL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G L AT + T + + + + + G +P+PPY+ R
Sbjct: 124 CREMTVKGFPITLTATRGECRGTSHWIDFRWDNPEVTFADILEVFGELPIPPYLN--RDT 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF PVK
Sbjct: 182 EESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + + + ++VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVSRS---IIKKLIDHDACAIAVGTTSVRTLESLYHIGVTLANNPEA 298
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T E + W + T I I PGY ++ V +
Sbjct: 299 TEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGYDYKIVKAM 358
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 359 VTNFHQPQSTLLLLVSAFV-KGNWHTIYDYALGHDFRFLSYGDSSLLIP 406
>gi|108562810|ref|YP_627126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori HPAG1]
gi|122386664|sp|Q1CUC0|QUEA_HELPH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|107836583|gb|ABF84452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori HPAG1]
Length = 345
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPVLPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKV+ A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVMKARLFGSKHALLPSKTT--EVFFHRFFKDNTALTQIK--GKIKAGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F L ++ G +PLPPYI R
Sbjct: 114 -----DANYHAEVLELLHNGQRLIAFYNHKTPLNQENILKLLEQYGHMPLPPYIK--RTD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+EI I + + L + ++ +GTT+LR +E S
Sbjct: 226 KDIREHQIHTEILHIPKKSQEILRESQE----VLCIGTTALRSVEYFKRLKNSNQE-SFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|315586376|gb|ADU40757.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 35A]
Length = 345
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 124/365 (33%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKNNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DANYYAEVLELLHNGQRLIAFYNNKTPLNQASILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ VGTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|265766996|ref|ZP_06094825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
gi|263253373|gb|EEZ24849.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
Length = 406
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 123/409 (30%), Positives = 188/409 (45%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L + ++F
Sbjct: 9 RISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVSEDVFTSLPEYLPAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + ++ +W K K G +
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQMEHAAWLCMVGNLKKWKDGPL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G L AT + T + + + + + G +P+PPY+ R
Sbjct: 124 CREMTVKGFPITLTATRGECRGTSHWIDFRWDNPEVTFADILEVFGELPIPPYLN--RDT 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF PVK
Sbjct: 182 EESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + + + +VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVSRS---IIKKLIDHDACATAVGTTSVRTLESLYHIGVTLANNPEA 298
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T E + W + T I I PGY ++ V +
Sbjct: 299 TEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGYDYKIVKAM 358
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 359 VTNFHQPQSTLLLLVSAFV-KGNWHTIYDYALGHDFRFLSYGDSSLLIP 406
>gi|301308401|ref|ZP_07214355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
gi|300833871|gb|EFK64487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
Length = 404
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 127/409 (31%), Positives = 193/409 (47%), Gaps = 64/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VF
Sbjct: 7 RIEDYNYSLPDERIAKFPLPKRDESKLLLYR-----NGEISESIFKHITDYLPQNTLMVF 61
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+L + + E + SW+ K K+G +
Sbjct: 62 NNTRVIQARLLFQKETGARIEIFCLEPIEPHDYALIFQETRRCSWTCLVGNLKKWKEGTL 121
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPI 172
Q + K + L+ F+ + G +P+PPY+ R
Sbjct: 122 SKTIFIKDQPVVLTADKKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYL--HRET 179
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI VTLHVGAGTF PVK
Sbjct: 180 EKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLADIDARGIGREEVTLHVGAGTFKPVKS 239
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
+ + H MH+E + + + + S I++VGTTS+R LE+ A
Sbjct: 240 DTIEGHEMHTEFISVRRSSIERIKSNLGN---IIAVGTTSVRTLESLYYMGVILDNNPEA 296
Query: 280 TTEDGIINPWSGF-------------------------------TNIFITPGYRFRAVDI 308
T+ED ++ W + T I I PGY F+ V
Sbjct: 297 TSEDLVVKQWMPYDTNNNRLTAERSLQNILNYLDKHDADTLVTATQIIIAPGYEFKIVKG 356
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 357 IVTNFHQPKSTLLLLISAFV-KGNWKSIYEYALEHDFRFLSYGDSSLLL 404
>gi|60683103|ref|YP_213247.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis NCTC 9343]
gi|60494537|emb|CAH09336.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis NCTC 9343]
gi|301164615|emb|CBW24174.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis 638R]
Length = 407
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 123/409 (30%), Positives = 188/409 (45%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L + ++F
Sbjct: 10 RISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVSEDVFTSLPEYLPAGSLMIF 64
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K G +
Sbjct: 65 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMVGNLKKWKDGPL 124
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G L AT + T + + + + + G +P+PPY+ R
Sbjct: 125 CREMTVKGFPITLTATRGECRGTSHWIDFRWDNPEVTFADILEVFGELPIPPYLN--RDT 182
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF PVK
Sbjct: 183 EESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGAGTFKPVKS 242
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + + + ++VGTTS+R LE+ A
Sbjct: 243 EEIEGHEMHTEYISVSRS---IIKKLIDHDACAIAVGTTSVRTLESLYHIGVTLANNPEA 299
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T E + W + T I I PGY ++ V +
Sbjct: 300 TEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGYDYKIVKAM 359
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 360 VTNFHQPQSTLLLLVSAFV-KGNWHTIYDYALGHDFRFLSYGDSSLLIP 407
>gi|150002930|ref|YP_001297674.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
gi|149931354|gb|ABR38052.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
Length = 405
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 130/409 (31%), Positives = 195/409 (47%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +S+ + + LP +L S + ++F
Sbjct: 8 KISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVSEDIFTSLPHYLESGELMIF 62
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + SW K K+G +
Sbjct: 63 NNTKVIQARLHFRKETGALIEVFCLEPVQPNDYVLNFQQTRQCSWLCMIGNLKKWKEGTL 122
Query: 115 LHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G Q L AT + T + + I + + G +P+PPY+ R
Sbjct: 123 SRIVNVKGKQIVLSATRGECKGTSHWIDFSWDDDTITFADLLEVAGELPIPPYLN--RET 180
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +TLHVGAGTF PVK
Sbjct: 181 QESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREELTLHVGAGTFKPVKS 240
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + T + L + ++VGTTS+R LE+ A
Sbjct: 241 EEIEGHEMHTEYISVSKHTIEKLIAHHGE---AIAVGTTSVRTLESLYYIGVLISHNPDA 297
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T ++ + W + T I I PGY ++ V +
Sbjct: 298 TQDELHVQQWMPYEDKNDLTPVEALQQILDYLNRHEMEALHSSTQIIIAPGYTYKIVKKM 357
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF +++Y +A+ H +RF SYGD+SLL
Sbjct: 358 VTNFHQPQSTLLLLVSAFV-KGNWRRIYDYALGHDFRFLSYGDSSLLIP 405
>gi|308063247|gb|ADO05134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Sat464]
Length = 345
Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DAHYHAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|224535925|ref|ZP_03676464.1| hypothetical protein BACCELL_00789 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522453|gb|EEF91558.1| hypothetical protein BACCELL_00789 [Bacteroides cellulosilyticus
DSM 14838]
Length = 409
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 128/412 (31%), Positives = 195/412 (47%), Gaps = 66/412 (16%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +S+ + LP++L + ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSEDRFTSLPSYLPTGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + E + +W K K+G +
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIEPNDYVLNFQQTEHAAWLCMIGNLKKWKEGTL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ Q L AT + T + + I + + G +P+PPY+ R
Sbjct: 124 KREMTVKEQPITLTATRGECHGTSHWVDFRWDNPEITFADILEVFGELPIPPYLN--RDT 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L+ L G+ + +TLHVGAGTF PVK
Sbjct: 182 QESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLNALKEKGVDLEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
+ + H MH+E + T + L G+ ++VGTTS+R LE+ A
Sbjct: 242 AEIEGHEMHTEYISVSRGTIENL---IVHNGKAIAVGTTSVRTLESLYHIGVTLLKNPNA 298
Query: 280 TTEDGIINPWSGF---------------------------------TNIFITPGYRFRAV 306
T E+ ++ W + T I I PGY ++ V
Sbjct: 299 TEEELHVHQWQPYETAEETASITSVKALQAILDYLNRHDMEALHTSTQIIIAPGYDYKIV 358
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ +++NFH P+STLL+LVSAF + +Y A++H +RF SYGD+SLL
Sbjct: 359 NTMVTNFHQPQSTLLLLVSAFV-KGNWRNIYDFALNHDFRFLSYGDSSLLIP 409
>gi|217031611|ref|ZP_03437116.1| hypothetical protein HPB128_21g169 [Helicobacter pylori B128]
gi|298736674|ref|YP_003729202.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori B8]
gi|216946811|gb|EEC25407.1| hypothetical protein HPB128_21g169 [Helicobacter pylori B128]
gi|298355866|emb|CBI66738.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori B8]
Length = 345
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 121/365 (33%), Positives = 189/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKNNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L ++ G +PLPPYI R
Sbjct: 114 -----DANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQHCLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEILRESQE----ILCIGTTALRSVEYFKRLKNPNQE-SFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+++TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLDKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|307565267|ref|ZP_07627760.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
gi|307345936|gb|EFN91280.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
Length = 423
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 127/425 (29%), Positives = 193/425 (45%), Gaps = 80/425 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP SRIA P+ RD+++L++ I++ + +LP +L S +V N
Sbjct: 10 ISDYNYHLPDSRIAKYPLAKRDNSKLLLY-----KQGKITEDVFYNLPKYLPSGGLMVCN 64
Query: 63 NTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKVI A+++ + + + + SW K K G +
Sbjct: 65 NTKVIQARIHFRKETGALIEIFLLEPADPVDYELMFQTTHNCSWLCMVGNLKKWKDGKLK 124
Query: 116 HFFSQDGQSRLEATVIDKWNTGEIL--------LVFSISGIELERQISLVGTIPLPPYIA 167
F G+ ++K T L + + + +VG +P+PPY+
Sbjct: 125 RKFDIKGEKLTLIASLNKEKTLNTLGGTNHWIDFTWDNENVSFAEILEIVGELPIPPYLN 184
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L + GI +TLHVGAGTF
Sbjct: 185 --RDTEESDKETYQTVYSKIKGSVAAPTAGLHFTPEVLKAIDECGIVRDELTLHVGAGTF 242
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MHSE + T + L ++VGTTS+R LE+
Sbjct: 243 KPVKSEEIEGHNMHSEYVVVQRHTLEQL---LLHDCSAIAVGTTSVRTLESLYYMGIHLE 299
Query: 279 ----ATTEDGIINPWSGF-----------------------------------------T 293
A+ D I W + T
Sbjct: 300 ENPNASEADLHIKQWEPYDLPHNEEGLVIIKGVAITVRKAIENILFYLKKDNLQALHSST 359
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY ++ V L++NFH P+STL++LVSAF + + +Y +A++H +RF SYGD+
Sbjct: 360 QIIIAPGYTYKIVKALITNFHQPQSTLILLVSAFVKGD-WRNIYDYALNHDFRFLSYGDS 418
Query: 354 SLLFQ 358
SLL
Sbjct: 419 SLLIP 423
>gi|317177197|dbj|BAJ54986.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F16]
Length = 345
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 121/365 (33%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D++LP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYNLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHALLPSKTT--EVFFHRFFKDNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DAHYYAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + ++ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEVLCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|288928463|ref|ZP_06422310.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella sp. oral taxon 317 str. F0108]
gi|288331297|gb|EFC69881.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella sp. oral taxon 317 str. F0108]
Length = 407
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 125/412 (30%), Positives = 189/412 (45%), Gaps = 66/412 (16%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+K++++DLP RIA P+ RD ++L+V + +S S++ +L +VF
Sbjct: 7 RIKDYNYDLPDERIAKFPLPQRDKSKLLVYNHG-----EVSQDEFSNITRYLPQGALMVF 61
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + SW K K G +
Sbjct: 62 NNTKVIQARLHFRKETGSLIEIFLLEPALPADYEQMFQTTDACSWYCMVGNLKKWKGGPL 121
Query: 115 LHFFSQDGQSRLEATVIDKWNTGE----ILLVFSISGIELERQISLVGTIPLPPYIARKR 170
GQ ++ + E I ++ + + + G +P+PPY+ R
Sbjct: 122 TTTVEIAGQPAAVQLTAERDMSCETALKIDFKWTGNKLSFAELLDKAGELPIPPYLN--R 179
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D YQT Y+KI+GSVAAPTAGLHFT +L+ + GI +TLHVGAGTF PV
Sbjct: 180 NTQESDKTTYQTVYSKIKGSVAAPTAGLHFTQRVLADIDQHGIDREELTLHVGAGTFKPV 239
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED------- 283
K E+ + H MH+E I T + L + ++VGTTS+R LE+
Sbjct: 240 KSEEIEGHSMHTEYVCIRRTTLEKLLQ---HNCQAIAVGTTSVRTLESLYYMGCKVKANP 296
Query: 284 ---------GIINPWSG----------------------------FTNIFITPGYRFRAV 306
P+ T I I PGY+++ V
Sbjct: 297 NVSLEQLHVNQWEPYEPTPTNITPTEAIGELIAYMDRNNLPSLHSSTQIIIAPGYQYKIV 356
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
L++NFH P+STLL+LVSAF G + K +Y++A+ + +RF SYGD+S+L
Sbjct: 357 KRLVTNFHQPQSTLLLLVSAFVGGD-WKSIYRYALDNDFRFLSYGDSSILIP 407
>gi|261839233|gb|ACX98998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 52]
Length = 345
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFENNRALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DTHYYAEVLELLHNGQRLIAFYDNKTPLNQANILKLLEQHGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEMLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|295086575|emb|CBK68098.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Bacteroides xylanisolvens XB1A]
Length = 406
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 129/414 (31%), Positives = 191/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 --RDTEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQKKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAIVTNFHQPQSTLLLLVSAFV-KGNWHTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|262382395|ref|ZP_06075532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
gi|262295273|gb|EEY83204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
Length = 413
Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats.
Identities = 127/409 (31%), Positives = 193/409 (47%), Gaps = 64/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VF
Sbjct: 16 RIEDYNYSLPDERIAKFPLPKRDESKLLLYR-----NEEISESIFKHITDYLPQNTLMVF 70
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+L + + E + SW+ K K+G +
Sbjct: 71 NNTRVIQARLLFQKETGARIEIFCLEPIEPHDYALIFQETRRCSWTCLVGNLKKWKEGTL 130
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPI 172
Q + K + L+ F+ + G +P+PPY+ R
Sbjct: 131 SKTIFIKDQPVVLTADKKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYL--HRET 188
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI VTLHVGAGTF PVK
Sbjct: 189 EKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLADIDARGIGREEVTLHVGAGTFKPVKS 248
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
+ + H MH+E + + + + S I++VGTTS+R LE+ A
Sbjct: 249 DTIEGHEMHTEFISVRRSSIERIKSNLGN---IIAVGTTSVRTLESLYYMGVILDNNPEA 305
Query: 280 TTEDGIINPWSGF-------------------------------TNIFITPGYRFRAVDI 308
T+ED ++ W + T I I PGY F+ V
Sbjct: 306 TSEDLVVKQWMPYDTNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEFKIVKG 365
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 366 IVTNFHQPKSTLLLLISAFV-KGNWKSIYEYALEHDFRFLSYGDSSLLL 413
>gi|188527195|ref|YP_001909882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Shi470]
gi|238691904|sp|B2USM0|QUEA_HELPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188143435|gb|ACD47852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Shi470]
Length = 345
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A++ G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARIFGSKHAFLPSKTT--EVFFHRFFKDNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DAHYHAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|255012412|ref|ZP_05284538.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides sp. 2_1_7]
Length = 404
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 128/409 (31%), Positives = 194/409 (47%), Gaps = 64/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VF
Sbjct: 7 RIEDYNYSLPDERIAKFPLPKRDESKLLLYR-----NGEISESIFKHITDYLPQNSLMVF 61
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+L + + E + SW+ K K+G +
Sbjct: 62 NNTRVIQARLLFQKETGARIEIFCLEPIEPHDYALIFQETRRCSWTCLVGNLKKWKEGTL 121
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPI 172
Q + K + L+ F+ + G +P+PPY+ R
Sbjct: 122 SKTIFIKDQPVVLTADKKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYL--HRET 179
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFTS +L+ + + GI VTLHVGAGTF PVK
Sbjct: 180 EKSDLQTYQTVYSKIKGSVAAPTAGLHFTSEVLADIDARGIGREEVTLHVGAGTFKPVKS 239
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
+ + H MH+E + + + + S I++VGTTS+R LE+ A
Sbjct: 240 DTIEGHEMHTEFISVRRSSIERIKSNLGN---IIAVGTTSVRTLESLYYMGVILDNNPEA 296
Query: 280 TTEDGIINPWSGF-------------------------------TNIFITPGYRFRAVDI 308
T+ED ++ W + T I I PGY F+ V
Sbjct: 297 TSEDLVVKQWMPYDMNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEFKIVKG 356
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 357 IVTNFHQPKSTLLLLISAFV-KGNWKSIYEYALEHDFRFLSYGDSSLLL 404
>gi|150010325|ref|YP_001305068.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
gi|149938749|gb|ABR45446.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
Length = 404
Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 126/409 (30%), Positives = 192/409 (46%), Gaps = 64/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VF
Sbjct: 7 RIEDYNYSLPDERIAKFPLPKRDESKLLLYR-----NGEISESIFKHITDYLPQNSLMVF 61
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+L + + E + SW+ K K+G +
Sbjct: 62 NNTRVIQARLLFQKETGARIEIFCLEPIEPHDYALIFQETRRCSWTCLVGNLKKWKEGTL 121
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPI 172
+ + K + L+ F + G +P+PPY+ R
Sbjct: 122 SKTIFIKDEPVVLTADKKKSHGDTHLIEFIWDNEAYTFADILDAAGVLPIPPYL--HRET 179
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI VTLHVGAGTF PVK
Sbjct: 180 EKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLADIDARGIGREEVTLHVGAGTFKPVKS 239
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
+ + H MH+E + + + + S I++VGTTS+R LE+ A
Sbjct: 240 DTIEGHEMHTEFISVRRSSIERIKSNLGN---IIAVGTTSVRTLESLYYMGVILDNNPEA 296
Query: 280 TTEDGIINPWSGF-------------------------------TNIFITPGYRFRAVDI 308
T+ED ++ W + T I I PGY F+ V
Sbjct: 297 TSEDLVVKQWMPYDMNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEFKIVKG 356
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 357 IVTNFHQPKSTLLLLISAFV-KGNWKSIYEYALEHDFRFLSYGDSSLLI 404
>gi|218128584|ref|ZP_03457388.1| hypothetical protein BACEGG_00154 [Bacteroides eggerthii DSM 20697]
gi|217989308|gb|EEC55622.1| hypothetical protein BACEGG_00154 [Bacteroides eggerthii DSM 20697]
Length = 409
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 130/420 (30%), Positives = 205/420 (48%), Gaps = 82/420 (19%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + + LP +L ++ ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLPVRDQSKLLLYRHG-----EVSEDVFTSLPDYLPADSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-----------------INRREKEISCTLHMRVSPNSWSVYAR 104
NNTKVI A+L+ + +N ++ E + L M + W
Sbjct: 64 NNTKVIQARLHFHKETGALIEVFCLEPIRPNDYALNFQQTEHAAWLCMIGNLKKWKEGVL 123
Query: 105 PSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPP 164
+++ KG L ++ G + +D ++ I + + G +P+PP
Sbjct: 124 KREMVVKGKPLTLTAERGACHGTSHWVD--------FRWNNPEITFADILEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R D YQT Y+KI+GSVAAPTAGLHFT +L L G+++ +TLHVGA
Sbjct: 176 YLN--RETQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRKKGVELEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E + T + L + + G+ V+VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVSRNTLEKLIAHE---GKAVAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF---------------------------------TNIFIT 298
AT E+ + W + T I I
Sbjct: 291 TLLNSPDATEEELHVKQWQPYELTPEMASVSPVDALQAIVAYLNRHNMETLHTSTQIIIA 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ V +++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 351 PGYEYKIVKAIVTNFHQPQSTLLLLVSAFL-RGDWRKIYDYALAHDFRFLSYGDSSLLIP 409
>gi|317179221|dbj|BAJ57009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F30]
Length = 345
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 124/365 (33%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK D + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNTALTQIK--GKIKVEDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DAHYYAEVLELLHNGQRLIAFYNNKTPLNQANILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D DH +H+E+ I + + L + I+ VGTT+LR +E +
Sbjct: 226 KDIRDHQIHTEVLCIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENPNQETF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|317012224|gb|ADU82832.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Lithuania75]
Length = 345
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LIVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKNNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F L ++ G +PLPPYI R
Sbjct: 114 -----DTNYHAEVLELLHNGQRLIAFYDHKTPLNQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEILQESQE----ILCIGTTALRSVEYFKRLKNPNQE-SFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+++TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLDKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|53715168|ref|YP_101160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
gi|52218033|dbj|BAD50626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
Length = 406
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 123/409 (30%), Positives = 187/409 (45%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ + S+ + + LP +L + ++F
Sbjct: 9 RISEYNYPLPDERIAKFPLPVRDQSKLLIYRHGEA-----SEDVFTSLPEYLPAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K G +
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMVGNLKKWKDGPL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G L AT + T + + + + + G +P+PPY+ R
Sbjct: 124 CREMTVKGFPITLTATRGECRGTSHWIDFRWDNPEVTFADILEVFGELPIPPYLN--RDT 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF PVK
Sbjct: 182 EESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + + + +VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVSRS---IIKKLIDHDACATAVGTTSVRTLESLYHIGVTLANNPEA 298
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T E + W + T I I PGY ++ V +
Sbjct: 299 TEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGYDYKIVKAM 358
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 359 VTNFHQPQSTLLLLVSAFV-KGNWHTIYDYALGHDFRFLSYGDSSLLIP 406
>gi|293372292|ref|ZP_06618677.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CMC 3f]
gi|292632734|gb|EFF51327.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CMC 3f]
Length = 406
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 128/414 (30%), Positives = 191/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDRQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 --RDTEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGINLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|307637081|gb|ADN79531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 908]
gi|325995672|gb|ADZ51077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 2018]
gi|325997268|gb|ADZ49476.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 2017]
Length = 345
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKGNTALTQIK--GKIKAGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
A V++ + G+ L+ F + L ++ G +PLPPYI R
Sbjct: 114 -----DENYYAEVLELLHNGQRLIAFYDNQTPLTQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDVHEYQSVFAKHIGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEILQESQE----ILCIGTTALRSVEYFKRLKNPNQE-SFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LL+LVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNHLLTNFHLPKSSLLILVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|210134580|ref|YP_002301019.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori P12]
gi|226713841|sp|B6JKW1|QUEA_HELP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|210132548|gb|ACJ07539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori P12]
Length = 345
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 120/365 (32%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPVLPKEKAKLLVYDRRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKV+ A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVMKARLFGSKHAFLPSKTT--EVFFHRFFKDNTALTQIK--GKIKAGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
A V++ + G+ L+ F + L ++ G +PLPPYI R
Sbjct: 114 -----DENYCAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQHTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|213023923|ref|ZP_03338370.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 289
Score = 289 bits (740), Expect = 5e-76, Method: Composition-based stats.
Identities = 115/291 (39%), Positives = 167/291 (57%), Gaps = 14/291 (4%)
Query: 69 AQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEA 128
A+L G + +I + + + R SK K G L + + A
Sbjct: 1 ARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDDES---IHA 52
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
T+ + G + V + ++ +G +PLPPYI RP + D YQT Y++
Sbjct: 53 TMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELYQTVYSEKP 108
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIMHSE +
Sbjct: 109 GAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVP 168
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFITPGYRFRAV 306
A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI PGY+++ +
Sbjct: 169 QEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVI 228
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 229 DALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 279
>gi|256371731|ref|YP_003109555.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Acidimicrobium ferrooxidans DSM 10331]
gi|256008315|gb|ACU53882.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Acidimicrobium ferrooxidans DSM 10331]
Length = 349
Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 114/354 (32%), Positives = 177/354 (50%), Gaps = 28/354 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V FD+DLP IA P+ PR +ARL+V ++ V+DL L D +V N
Sbjct: 18 VDAFDYDLPAEAIAHDPIEPRRAARLLVARRG----APVAHARVADLARLLEPGDLVVVN 73
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+ V+ A+L+ R + L ++ + RP++ ++ G+ L DG
Sbjct: 74 ESAVVPARLHLQRSS-----GGAVEVLLLRQLPDGTAEALVRPNRRVRAGERLL---ADG 125
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+E + G + + E +++ +G PLPPY+ R+ YQT
Sbjct: 126 VEVVEVGGALEAVEGMTIRAVRVLDPE---RVASIGVAPLPPYLGRQ----DIPLERYQT 178
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ GSVAAPTAGLH +L+ L + GI V + LHVG GTF PV H MH+
Sbjct: 179 VFARRPGSVAAPTAGLHLDEVVLADLAARGIDVVRIVLHVGLGTFWPVTAATLAGHPMHA 238
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E +D T + R+V++GTT +R LET +G + + I PG+R
Sbjct: 239 ESYEVDPATWARI----EGAKRVVAIGTTVVRTLETVALTG----ELAGESRLLIAPGFR 290
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ VD +++NFH P+STL+ LV+A G + +++Y A++ YRF S+GD L+
Sbjct: 291 LQVVDTVLTNFHQPRSTLIALVAAMVG-DRWRELYSVALAEGYRFLSFGDAMLV 343
>gi|297379606|gb|ADI34493.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori v225d]
Length = 345
Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKKLIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DAHYHAEVLELLHNGQRLIAFYGNKNPLNQANILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+ K++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKIKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|288800160|ref|ZP_06405619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
gi|288333408|gb|EFC71887.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
Length = 404
Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats.
Identities = 126/408 (30%), Positives = 191/408 (46%), Gaps = 63/408 (15%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+K+++++LP RIA P RD +++++ + I + + ++ FL +VFN
Sbjct: 8 IKDYNYELPDERIAKFPKSERDHSKILIYNKGD-----IVEDIFYNIVNFLPEKALMVFN 62
Query: 63 NTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKVI A+L+ + + E + R W K K+G +
Sbjct: 63 NTKVIQARLHFQKQSGAHIEIFLLEPAEPFDYELMFQRKEQCVWVCMIGNLKKWKEGVLT 122
Query: 116 HFFSQDGQSRL--EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+G S + + ++ L + + + I ++G +P+PPY+ R
Sbjct: 123 KEIEINGHSVTIKVERLEQVGASHKVCLSWDDTSLSFAELIDVIGELPIPPYLN--RDTQ 180
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y+KI+GSVAAPTAGLHFT ++LS + GI +TLHVGAGTF PVK E
Sbjct: 181 ESDKTTYQTVYSKIKGSVAAPTAGLHFTKDVLSEIDKKGIVREELTLHVGAGTFKPVKSE 240
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED---------- 283
+H MH+E + T + L ++VGTTS+R LE+
Sbjct: 241 LISEHDMHTEYISVSKSTLETLRKF---NASAIAVGTTSVRTLESLYYIGLKLHKNPHLI 297
Query: 284 ------GIINPWSGFTN---------------------------IFITPGYRFRAVDILM 310
P+ TN I I PGY ++ V +L+
Sbjct: 298 DEELAVKQWEPYEQTTNVTALEAINAIIKYLDENDLDTLHSSTQIMIAPGYEYKIVKMLV 357
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+NFH P+STLL+LVSAF G + K+Y +A+ H +RF SYGD+SLL
Sbjct: 358 TNFHQPQSTLLLLVSAFIG-DNWHKVYNYALEHDFRFLSYGDSSLLIP 404
>gi|254779075|ref|YP_003057180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori B38]
gi|254000986|emb|CAX28930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Helicobacter pylori B38]
Length = 345
Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKVI A+L G + + K H N+ + IK GD + F
Sbjct: 58 LIVLNDTKVIKARLFGSKHAFLPS--KMTEVFFHRFFKDNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F L ++ G +PLPPYI R
Sbjct: 114 -----DANYYAEVLELLHNGQRLIAFYDHKTPLNQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQHGLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEILQESQE----ILCIGTTALRSVEYFKRLKNPNQE-SFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + + L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHANYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|256839172|ref|ZP_05544682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|298374718|ref|ZP_06984676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
gi|256740091|gb|EEU53415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|298269086|gb|EFI10741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
Length = 404
Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats.
Identities = 128/409 (31%), Positives = 194/409 (47%), Gaps = 64/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VF
Sbjct: 7 RIEDYNYSLPDERIAKFPLPKRDESKLLLYR-----NGEISESIFKHITDYLPQNSLMVF 61
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+L + + E + SW+ K K+G +
Sbjct: 62 NNTRVIQARLLFQKETGARIEIFCLEPIEPHDYALIFQETRRCSWTCLVGNLKKWKEGTL 121
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPI 172
Q + K + L+ F+ + G +P+PPY+ R
Sbjct: 122 SKTIFIKDQPVVLTADKKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYL--HRET 179
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFTS +L+ + + GI VTLHVGAGTF PVK
Sbjct: 180 EKSDLQTYQTVYSKIKGSVAAPTAGLHFTSEVLADIDARGIGREEVTLHVGAGTFKPVKS 239
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
+ + H MH+E + + + + S I++VGTTS+R LE+ A
Sbjct: 240 DTIEGHEMHTEFISVRRSSIERIKSNLGN---IIAVGTTSVRTLESLYYMGVILDNNPEA 296
Query: 280 TTEDGIINPWSGF-------------------------------TNIFITPGYRFRAVDI 308
T+ED ++ W + T I I PGY F+ V
Sbjct: 297 TSEDLVVKQWMPYDMNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEFKIVKG 356
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 357 IVTNFHQPKSTLLLLISAFV-KGNWKSIYEYALEHDFRFLSYGDSSLLI 404
>gi|237750185|ref|ZP_04580665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter bilis ATCC 43879]
gi|229374079|gb|EEO24470.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter bilis ATCC 43879]
Length = 376
Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats.
Identities = 120/388 (30%), Positives = 192/388 (49%), Gaps = 47/388 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +DF LP IA P+ P+++A+L++ H I+ +L ++ + IV
Sbjct: 5 LDLSSYDFTLPNDLIATEPIKPKENAKLLIYH-----NGKITHTTFYELFNYIPKDYLIV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEI----------SCTLHMRVSPNSWSVYARPSKVIK 110
N+T+VI A+L + + + +I H +S N V + +
Sbjct: 60 LNDTRVINARLFANKLSLESLHKTQILNDSILPTKREIFYHKHLSNNLHLVQIKGKAKLH 119
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFS-------------------ISGIELE 151
F Q + + V+D + G ++ F +S ++
Sbjct: 120 D----IFTLQYNNTNVFIQVVDIKDDGYKIVSFFTLKDISALKQNLLQNHAEKLSQEKVL 175
Query: 152 RQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
+ G IPLPPY+ R +D DYQ+ +A+ +GSVAAPTA LHF+ ++ + +
Sbjct: 176 SLLQTCGNIPLPPYMK--RESTEKDSKDYQSIFARNEGSVAAPTASLHFSESMF-KYLKE 232
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
FVTLHVGAGTF P+ E+ +H +H+E I AQ + K +I+ VGTT
Sbjct: 233 NYNHAFVTLHVGAGTFKPITCENILNHKIHTESCIIAKKEAQKILESK----KILCVGTT 288
Query: 272 SLRLLETATTED--GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCG 329
++R +E E+ I + G IF+ P + V L++NFHLPKS+LLMLVS+ G
Sbjct: 289 AMRSVEWLIRENVAQIESDIMGENAIFLNPFNPPKKVKALLTNFHLPKSSLLMLVSSIIG 348
Query: 330 IEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ET ++Y+ AI++ YRFYSYGD L+
Sbjct: 349 RKETLRIYEEAIANKYRFYSYGDGMLII 376
>gi|313204024|ref|YP_004042681.1| s-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
gi|312443340|gb|ADQ79696.1| S-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
Length = 410
Score = 288 bits (738), Expect = 8e-76, Method: Composition-based stats.
Identities = 133/410 (32%), Positives = 194/410 (47%), Gaps = 65/410 (15%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+D+ LP RIA P+ RDS++L++ I + S + FL N +V+N
Sbjct: 12 IDEYDYSLPDERIAKYPLAQRDSSKLLLY-----KNGNIGESQFSKIADFLPENALLVYN 66
Query: 63 NTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NT+VI A+L + + S W K K+G +
Sbjct: 67 NTRVIQARLIFHKNTGARIEVFCLEPLNPADYAQSLGATSECVWKCMVGNLKKWKEGLLS 126
Query: 116 HFFSQDGQ-SRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ DG+ EA ++ + NT I + + I + G +P+PPY+ R +
Sbjct: 127 KTIAFDGKTCTFEAELLHTEGNTHSIHFRWDNADIHFADILEKAGELPIPPYL--HRKTE 184
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y+KI+GSVAAPTAGLHFT + L I+ +TLHVGAGTF PVK
Sbjct: 185 ESDLTSYQTVYSKIKGSVAAPTAGLHFTPEVFESLKPKLIETEELTLHVGAGTFQPVKTR 244
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------------- 280
D +H MH+EI + T + ++ + G I++VGTTS+R LE+
Sbjct: 245 DIAEHHMHTEIISVKRST---IVHLQQKLGNIIAVGTTSVRTLESLYFIGAMLQQDAVSE 301
Query: 281 -TEDGI----INPWSG---------------------------FTNIFITPGYRFRAVDI 308
E G P+ G T I I PGY F +D
Sbjct: 302 IAEKGFHVPQWAPYEGKMEISTYDALQNILDYLDKNKLTTLHADTQIMIKPGYEFHLIDG 361
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH PKSTLL+LVSAF +++Y +A+S+ +RF SYGD+SLL +
Sbjct: 362 MVTNFHQPKSTLLLLVSAFV-NGNWREIYHYALSNNFRFLSYGDSSLLMK 410
>gi|229495188|ref|ZP_04388923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
gi|229317631|gb|EEN83529.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
Length = 445
Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats.
Identities = 124/407 (30%), Positives = 186/407 (45%), Gaps = 61/407 (14%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP RIA P+ R + RL+V I + F+ + ++ N
Sbjct: 49 IESYDYPLPDERIARYPLEDRAACRLLVYR-----SGEIISSQFRQITDFIPEHSLLIRN 103
Query: 63 NTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NT+VI A+++ + + S SW ++ K+G +
Sbjct: 104 NTRVIRARIHVQKPSGAQIEIMCLEPASPAQYERALSATSGCSWHCLVGNARRWKEGALE 163
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ G++ I++ I ++ +S+VG +P+PPY+ +R +
Sbjct: 164 TLVTLPGETDPILFRIERGEGDVIHFSWNSDHCTFGELLSVVGILPIPPYL--RRETEES 221
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D ++YQT YA+ GSVAAPTAGLHFT L L G+ + +TLHVGAGTFMPVK
Sbjct: 222 DNINYQTVYAQCDGSVAAPTAGLHFTPELFEALKEKGVSLGEITLHVGAGTFMPVKTSKI 281
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-------TEDG---- 284
DH MH E+ ++ L I++VGTTS+R LE+ E G
Sbjct: 282 GDHRMHQEVCRVERGIVAQLAGGSYS--PIIAVGTTSVRTLESLYLLALNHIDELGQEDH 339
Query: 285 -----IINPWSGF----------------------------TNIFITPGYRFRAVDILMS 311
P+ T + I PGY FR V +++
Sbjct: 340 LPFVTQWEPYETDYPEASMPQVMAALLSKMDSLSLEEVVFSTALLIAPGYTFRVVGGMVT 399
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
NFH PKSTLL+++SAF G E +++Y +A+SH YRF SYGD SLL
Sbjct: 400 NFHQPKSTLLLMISAFLGEE-WERIYDYALSHDYRFLSYGDGSLLLP 445
>gi|329960192|ref|ZP_08298634.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fluxus YIT 12057]
gi|328532865|gb|EGF59642.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fluxus YIT 12057]
Length = 409
Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats.
Identities = 130/412 (31%), Positives = 200/412 (48%), Gaps = 66/412 (16%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + + LP +L+S ++F
Sbjct: 9 HISEFNYPLPDKRIAKFPLPLRDQSKLLIYRHG-----EVSEDVFTSLPGYLSSGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K+G +
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKEGVL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ + G+ L A + T + ++ I + + G +P+PPY+ R
Sbjct: 124 IREMTVKGKPLTLTAERGECRGTSHWVDFRWNNPEITFADILEVFGELPIPPYLN--RET 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L L G+ + +TLHVGAGTF PVK
Sbjct: 182 QESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALKEKGVDLEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + T + L + + G+ ++VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVTRNTLKKLIAHE---GKAIAVGTTSVRTLESLYHIGVTLYNTPDA 298
Query: 280 TTEDGIINPWSGF---------------------------------TNIFITPGYRFRAV 306
T E+ + W + T I I PGY +R V
Sbjct: 299 TEEELHVRQWQPYEMTGESTAIPATDALQAILRYLDRHGMETLHTSTQIIIAPGYEYRIV 358
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH P+STLL+LVSAF + KK+Y +A+ H +RF SYGD+SLL
Sbjct: 359 KAMVTNFHQPQSTLLLLVSAFV-HGDWKKIYDYALGHDFRFLSYGDSSLLIP 409
>gi|313149103|ref|ZP_07811296.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
gi|313137870|gb|EFR55230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
Length = 406
Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats.
Identities = 124/409 (30%), Positives = 189/409 (46%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP L + ++F
Sbjct: 9 RISEYNYSLPDERIAKFPLPMRDQSKLLIYRHG-----EVSEDVFTSLPEHLPAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K G +
Sbjct: 64 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGPL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G L AT + T + + + + + G +P+PPY+ R
Sbjct: 124 RREMTVKGFPITLTATRGECRGTSHWIDFNWDNPEVTFADILEVFGELPIPPYLN--RDT 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF PVK
Sbjct: 182 EESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + + + ++VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVSRS---IIKKLIDHDACAIAVGTTSVRTLESLYHIGVTLANNPEA 298
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T E + W + T I I PGY ++ V +
Sbjct: 299 TEEQLRVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGYEYKIVKAM 358
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 359 VTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALSHDFRFLSYGDSSLLIP 406
>gi|160886607|ref|ZP_02067610.1| hypothetical protein BACOVA_04618 [Bacteroides ovatus ATCC 8483]
gi|156107018|gb|EDO08763.1| hypothetical protein BACOVA_04618 [Bacteroides ovatus ATCC 8483]
Length = 406
Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats.
Identities = 129/414 (31%), Positives = 192/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDRQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFTS +L L GI + +TLHVGAGTF
Sbjct: 179 --RDTEESDKETYQTVYSKIKGSVAAPTAGLHFTSRVLDALQEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|317181727|dbj|BAJ59511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F57]
Length = 345
Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats.
Identities = 121/365 (33%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKNNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L + G +PLPPYI R
Sbjct: 114 -----DAHYYAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + ++ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEVLCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVS G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNHLLTNFHLPKSSLLMLVSTMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|255011292|ref|ZP_05283418.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis 3_1_12]
Length = 407
Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 124/409 (30%), Positives = 189/409 (46%), Gaps = 63/409 (15%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP L + ++F
Sbjct: 10 RISEYNYSLPDERIAKFPLPMRDQSKLLIYRHG-----EVSEDVFTSLPEHLPAGSLMIF 64
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + +W K K G +
Sbjct: 65 NNTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGPL 124
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ G L AT + T + + + + + G +P+PPY+ R
Sbjct: 125 RREMTVKGFPITLTATRGECRGTSHWIDFNWDNPEVTFADILEVFGELPIPPYLN--RDT 182
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF PVK
Sbjct: 183 EESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGAGTFKPVKS 242
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E + + + ++VGTTS+R LE+ A
Sbjct: 243 EEIEGHEMHTEYISVSRS---IIKKLIDHDACAIAVGTTSVRTLESLYHIGVTLANNPEA 299
Query: 280 TTEDGIINPWSGF------------------------------TNIFITPGYRFRAVDIL 309
T E + W + T I I PGY ++ V +
Sbjct: 300 TEEQLRVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGYEYKIVKAM 359
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 360 VTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALSHDFRFLSYGDSSLLIP 407
>gi|325282154|ref|YP_004254696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
gi|324313963|gb|ADY34516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
Length = 408
Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 138/408 (33%), Positives = 199/408 (48%), Gaps = 61/408 (14%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++ ++LP RIA P+ R++++L++ I + S++ L + +VF
Sbjct: 12 RIEDYTYNLPDERIAKFPLAEREASKLLIYRGER-----IEESRFSEVRHLLRAGQMLVF 66
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L + + WS K K+G I
Sbjct: 67 NNTKVIHARLFFRKATGAVIEVFCLEPYLPVDYAQNFAARDSCEWSCMVGNLKKWKEGSI 126
Query: 115 -LHFFSQDGQSRLEATVIDKWNTGEILLVFSISG-IELERQISLVGTIPLPPYIARKRPI 172
F + RL A + + GE+++ FS +G + + G IP+PPY+ R
Sbjct: 127 ACDFTYGEATYRLTAEKV-RQQEGELIIRFSWTGGLSFSEVLEGCGRIPIPPYLN--RES 183
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+A D V YQT Y+K +GSVAAPTAGLHFT +L+ L G+ V +TLHVGAGTF PVK
Sbjct: 184 EASDEVRYQTVYSKEEGSVAAPTAGLHFTRAILNDLKEKGVHVRELTLHVGAGTFRPVKA 243
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---------ATTED 283
E DH MH+E I + L IV+VGTTS+R LE+ A ED
Sbjct: 244 ETIGDHDMHTEHLVISRELVEQLKEKTGD---IVAVGTTSVRTLESLYWMGVKRLAGQED 300
Query: 284 ----GIINPW---------------SGF------------TNIFITPGYRFRAVDILMSN 312
G + G+ T I I PGYR+R +D + +N
Sbjct: 301 FFTLGQWEAYTLPQDYSLREAMEALCGWFDTACQELLKARTTIIIVPGYRYRVIDAMFTN 360
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
FH P+STLL+LV A G + K+Y +A++H +RF SYGD+SLL K+
Sbjct: 361 FHQPQSTLLLLVGAAVGED-WHKIYDYALTHDFRFLSYGDSSLLEVKK 407
>gi|109947703|ref|YP_664931.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter acinonychis str. Sheeba]
gi|123362591|sp|Q17WP4|QUEA_HELAH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|109714924|emb|CAJ99932.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter acinonychis str. Sheeba]
Length = 345
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 121/365 (33%), Positives = 189/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA P+ P++ A+L++ + I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPILPKEKAKLLIYERHSQ---KITHTTFEHVLDFFPKNT 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G ++ + + H + N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKYAFLPSKTT--EVFFHRFLKNNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
A V++ N G+ L+ F + L++ G +PLPPYI R
Sbjct: 114 -----DENHYAEVLELLNNGQRLIAFYDNKTPLDQASILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D ++YQ+ +AK G+VAAPTA LHF+ N L L+ K F+TLHVGAGTF V+
Sbjct: 167 ESLDTLEYQSVFAKHIGAVAAPTASLHFSQNTLENLL-KDFKHTFLTLHVGAGTFASVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEIL----QKSQEILCIGTTALRSVE-YFKRLKTPKQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + + L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHANYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|308184187|ref|YP_003928320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori SJM180]
gi|308060107|gb|ADO02003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori SJM180]
Length = 345
Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 120/365 (32%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKV+ A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVMKARLFGSKHAFLPSKTT--EVFFHRFFKNNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L ++ G +PLPPYI R
Sbjct: 114 -----DANYHAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQHSLEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|329957188|ref|ZP_08297755.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides clarus YIT 12056]
gi|328523456|gb|EGF50555.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides clarus YIT 12056]
Length = 409
Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 130/412 (31%), Positives = 198/412 (48%), Gaps = 66/412 (16%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + + LP +L +N ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLPVRDQSKLLLYRHG-----EVSEDVFTSLPDYLPANSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + +W K K+G +
Sbjct: 64 NNTKVIQARLHFHKETGALIEVFCLEPIRPNDYALNFQQTEHAAWLCMIGNLKKWKEGTL 123
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
G+ L A T + ++ I + + G +P+PPY+ R
Sbjct: 124 KREMVVKGKPLTLTAERGACHGTSHWVDFRWNNPEITFADILEVFGELPIPPYLN--RET 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L L G++ +TLHVGAGTF PVK
Sbjct: 182 QESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRGKGVEPEELTLHVGAGTFKPVKS 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E+ + H MH+E ++ T + L + + G+ ++VGTTS+R LE+ A
Sbjct: 242 EEIEGHEMHTEYISVNRSTLEKLVAHE---GKAIAVGTTSVRTLESLYHIGVTLLNNPDA 298
Query: 280 TTEDGIINPWSGF---------------------------------TNIFITPGYRFRAV 306
T ED + W + T I I PGY +R V
Sbjct: 299 TEEDLHVKQWQPYEMTPETAATPAVDALRAIIAYLDRHHMETLHTSTQIIIAPGYEYRIV 358
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 359 KAMVTNFHQPQSTLLLLVSAFL-HGDWRKIYDYALAHDFRFLSYGDSSLLIP 409
>gi|317502932|ref|ZP_07961027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
gi|315665966|gb|EFV05538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
Length = 422
Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 132/421 (31%), Positives = 202/421 (47%), Gaps = 75/421 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D++LP RIA P+ RD ++L++ IS+ L +LP +L +VF
Sbjct: 13 KINDYDYNLPEERIAKFPLANRDHSKLLIY-----KHGDISEDLFYNLPNYLPKQSLMVF 67
Query: 62 NNTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+++ + + SW K K+G +
Sbjct: 68 NNTKVIQARIHFRKETGALIEIFLMEPASPSDYELMFQTKGHCSWLCMVGNLKKWKEGSL 127
Query: 115 LHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPLPPYI 166
+F G+S+ + + K T + + + + + +VG +P+PPY+
Sbjct: 128 KRYFVIAGKSQTLSASLHKEKTNQSSTGTNYWVDFDWDNDNVNFAEILEVVGELPIPPYL 187
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R D YQT Y+KI+GSVAAPTAGLHFT+ +L + GI+ +TLHVGAGT
Sbjct: 188 N--RETQDSDKKTYQTVYSKIKGSVAAPTAGLHFTNEVLHAIDEHGIEREELTLHVGAGT 245
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------- 278
F PVK E+ D H MH+E + T L ++ G ++VGTTS+R LE+
Sbjct: 246 FKPVKSEEIDQHEMHTEYIVVHRHT---LINLLKYGCNAIAVGTTSVRTLESLYYIGVKL 302
Query: 279 -----ATTEDGIINPWS------------------------------------GFTNIFI 297
A+ ++ +N W G T I I
Sbjct: 303 EQNPDASEDELHVNQWEPYEQSHDGGLVKDITAERSLQNIIDWLDKSDVKVLHGSTQIII 362
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ V +L++NFH P+STLL+LVSAF + K +Y +A++H +RF SYGD+SLL
Sbjct: 363 APGYKYKIVKMLITNFHQPQSTLLLLVSAFVNGD-WKCIYDYALTHDFRFLSYGDSSLLI 421
Query: 358 Q 358
Sbjct: 422 P 422
>gi|218249453|ref|YP_002374555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi ZS7]
gi|226322064|ref|ZP_03797589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi Bol26]
gi|218164641|gb|ACK74702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi ZS7]
gi|226232654|gb|EEH31408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi Bol26]
Length = 343
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 124/361 (34%), Positives = 186/361 (51%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIGTNLFTALVSKSKKQIIGNFYKFPEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++ K ++ +L + G + +PLP YI R D D Y
Sbjct: 111 -----LMGEILSKNSSEVVLKFNNDVGED---YFEKHCFVPLPSYIK--RDYDKIDEDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 161 QTIYSKYVGSAASATAGLHFSIDLFSVFENNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G +I+S+ TT+LR LE++ + TN+FI P
Sbjct: 221 HFETFLIKDFVAVRLQNAKLLGKKILSIVTTTLRALESSYDNNLKKFKTGQQSTNLFIYP 280
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 281 GKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYGDAMLIL 340
Query: 358 Q 358
Sbjct: 341 N 341
>gi|317009031|gb|ADU79611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori India7]
Length = 345
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 120/365 (32%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKV+ A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVMKAKLFGSKHAFLPSKTT--EVFFHRFFKNNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L ++ G +PLPPYI R
Sbjct: 114 -----DANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHTGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E
Sbjct: 226 KDIREHQIHTEVLRIPKKSQKILQESQE----ILCIGTTALRSVEYFKRLKNPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|284036021|ref|YP_003385951.1| Queuosine biosynthesis protein [Spirosoma linguale DSM 74]
gi|283815314|gb|ADB37152.1| Queuosine biosynthesis protein [Spirosoma linguale DSM 74]
Length = 409
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 130/415 (31%), Positives = 199/415 (47%), Gaps = 69/415 (16%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ EF +DLP RIA P+ RD+++L++ V+S + +DLP+ L N +V
Sbjct: 7 LLLSEFQYDLPDDRIARFPLPQRDASKLLLY-----KGGVVSHNRFTDLPSLLLPNSFLV 61
Query: 61 FNNTKVITAQLNGVRFCH------------INRREKEISCTLHMRVSPN-SWSVYARPSK 107
FN+TKVI A+L+ + I + +L M + W K
Sbjct: 62 FNDTKVIPARLHFTKPTGALIELFLLNPFPIEPGGEPAPISLAMEETGTAIWQGMIGNRK 121
Query: 108 VIKKGDIL--HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
K+ + L F + +G+ L A+ D ++ + L + + + + + +G IPLPPY
Sbjct: 122 RWKQDEPLVTTFPTPEGEVILTASWHD-YDQSAVRLSWQPAELTFAQLVQYIGEIPLPPY 180
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ R A D YQT Y+K +G+VAAPTAGLHFT+ + L + I ++TLHVGAG
Sbjct: 181 LK--REATATDRETYQTVYSKQEGAVAAPTAGLHFTAAVFEALANNNINHDYLTLHVGAG 238
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-- 283
TF P+K +D H MH+E + L + +V+VGTTS+R LE+
Sbjct: 239 TFQPIKTDDVRQHHMHTEQVVYTQANVRNLLAHL---DTVVAVGTTSMRALESLYWIGTK 295
Query: 284 ---GIINPWS-------------------------------------GFTNIFITPGYRF 303
NP+ T I+ITPGYR
Sbjct: 296 LVRKEPNPFQLDQQYAYQLPDDQQPSVADALNAVLDYLVTANKESVVAHTGIYITPGYRI 355
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
R L++NFH P STL++L++ G + K +Y+ A+ + YRF SYGD+SLL
Sbjct: 356 RLCKGLVTNFHQPGSTLILLIATLIG-DSWKNVYKEALENDYRFLSYGDSSLLIP 409
>gi|208434332|ref|YP_002265998.1| S-adenosyl methionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori G27]
gi|226713842|sp|B5ZAF2|QUEA_HELPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|208432261|gb|ACI27132.1| S-adenosyl methionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori G27]
Length = 345
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 121/365 (33%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKV+ A+L G + + + H N+ + IK GD + F
Sbjct: 58 LIVLNDTKVMKARLFGSKHAFLPSKTT--EVFFHRFFKDNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
A V++ + G+ L+ F + L ++ G +PLPPYI R
Sbjct: 114 -----DENYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHTGAVAAPTASLHFSQHGLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|317475610|ref|ZP_07934871.1| queuosine biosynthesis protein [Bacteroides eggerthii 1_2_48FAA]
gi|316908180|gb|EFV29873.1| queuosine biosynthesis protein [Bacteroides eggerthii 1_2_48FAA]
Length = 409
Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats.
Identities = 129/420 (30%), Positives = 204/420 (48%), Gaps = 82/420 (19%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ + + + + LP +L ++ ++F
Sbjct: 9 RISEFNYLLPDERIAKFPLPVRDQSKLLLYRHG-----EVFEDVFTSLPDYLPADSLMIF 63
Query: 62 NNTKVITAQLNGVRFCH-----------------INRREKEISCTLHMRVSPNSWSVYAR 104
NNTKVI A+L+ + +N ++ E + L M + W
Sbjct: 64 NNTKVIQARLHFHKETGALIEVFCLEPIRPNDYALNFQQTEHAAWLCMIGNLKKWKEGVL 123
Query: 105 PSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPP 164
+++ KG L ++ G + +D ++ I + + G +P+PP
Sbjct: 124 KREMVVKGKPLTLTAERGACHGTSHWVD--------FRWNNPEITFADILEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R D YQT Y+KI+GSVAAPTAGLHFT +L L G+++ +TLHVGA
Sbjct: 176 YLN--RETQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRKKGVELEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E + T + L + + G+ V+VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVSRNTLEKLIAHE---GKAVAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF---------------------------------TNIFIT 298
AT E+ + W + T I I
Sbjct: 291 TLLNSPDATEEELHVKQWQPYELTPEMASVSPVDALQAIVAYLNRHNMETLHTSTQIIIA 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ V +++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 351 PGYEYKIVKAIVTNFHQPQSTLLLLVSAFL-RGDWRKIYDYALAHDFRFLSYGDSSLLIP 409
>gi|299148283|ref|ZP_07041345.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides sp. 3_1_23]
gi|298513044|gb|EFI36931.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides sp. 3_1_23]
Length = 406
Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats.
Identities = 128/414 (30%), Positives = 191/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + L RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLLDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 --RDTEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|260592515|ref|ZP_05857973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
gi|260535561|gb|EEX18178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
Length = 423
Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 129/425 (30%), Positives = 192/425 (45%), Gaps = 80/425 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L++ +S+ + +LP +L +VFN
Sbjct: 10 ISDYNYPLPDERIAKFPLTERDHSKLLLY-----KHGDVSEDIFYNLPEYLPKGALMVFN 64
Query: 63 NTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKVI A+++ + + + +W K K+G +
Sbjct: 65 NTKVIQARMHFRKETGALIEVFLMEPAQPTDYELMFQTNHECAWLCMVGNLKKWKEGALK 124
Query: 116 HFFSQDGQSRLEATVIDK--------WNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
F GQ +D+ I + + I + VG +P+PPY+
Sbjct: 125 RAFEIKGQKLTLTATMDRSKVQEQAGGTNHWIQFEWDNTNISFAEILEAVGELPIPPYLN 184
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L G+ +TLHVGAGTF
Sbjct: 185 --RATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLKALDEHGVDREELTLHVGAGTF 242
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK + + H MH+E + T L R ++VGTTS+R LE+
Sbjct: 243 KPVKSHEIEGHNMHTEFIIVRRQTLIKL---LKHKCRAIAVGTTSVRTLESLYYMGVKLV 299
Query: 279 ----ATTEDGIINPWSGF-----------------------------------------T 293
AT +D +N W + T
Sbjct: 300 SNNNATEDDLHVNQWEPYDLPHNSDGLVKVNGKVISVEESIQNLLDYLDRDGLNALHSST 359
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF SYGD+
Sbjct: 360 QIIIAPGYTYKIVKALITNFHQPQSTLLLLVSAFVKGD-WRKIYDYALSHDFRFLSYGDS 418
Query: 354 SLLFQ 358
SLL
Sbjct: 419 SLLIP 423
>gi|330996657|ref|ZP_08320535.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
gi|329572729|gb|EGG54362.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
Length = 431
Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats.
Identities = 132/423 (31%), Positives = 194/423 (45%), Gaps = 77/423 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+K+F+++LP RIA P+ RD ++L+V + + + LP +L +VF
Sbjct: 20 QIKDFNYNLPEERIAKFPLTERDQSKLLVYRHGT-----VGEDTFTSLPDYLPQGALMVF 74
Query: 62 NNTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + + + + SW K K G +
Sbjct: 75 NNTKVIQARLHFHKDTGALIEVFCLEPVRPHDYALMFQQTGRCSWLCLVGNLKKWKSGSL 134
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
G+S L+AT + T + + + VG +P+PPY+ R
Sbjct: 135 SCPVEIGGRSITLKATRGENRGTSHWIDFEWDDEQTTWAEILEAVGELPIPPYLN--RET 192
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+KI+GSVAAPTAGLHFT +L+ L + GI VTLHVGAGTF PVK
Sbjct: 193 QESDKTTYQTVYSKIKGSVAAPTAGLHFTERVLADLDAHGIDREEVTLHVGAGTFKPVKS 252
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------- 278
E+ H MH+E + T + L + GG ++VGTTS+R LE+
Sbjct: 253 EEIAGHEMHTEYICVHRSTIEKLLA---HGGACIAVGTTSVRTLESLYYIGVALNGNPDA 309
Query: 279 ---------------ATTEDGIINPWSG----------------------------FTNI 295
A + +P +G T I
Sbjct: 310 SEEELHVPQWMPYEYAARTRPVGSPDNGHPEALTTLQALQNVLDYLDRHGLTALHTSTQI 369
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
I PGY + V ++++NFH P+STLL+LVSAF + + +Y +A++H +RF SYGD+SL
Sbjct: 370 IIAPGYEYHIVRMMVTNFHQPQSTLLLLVSAFV-HGDWRTIYDYALAHDFRFLSYGDSSL 428
Query: 356 LFQ 358
L
Sbjct: 429 LIP 431
>gi|317010661|gb|ADU84408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori SouthAfrica7]
Length = 345
Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 186/365 (50%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA P+ P++ A+L+V + I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPILPKEKAKLLVYERHSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKV+ A+L G + + + H NS + IK GD + F
Sbjct: 58 LIVLNDTKVMKARLFGSKHAFLPSKTT--EVFFHRFFKDNSALAQIK--GKIKVGDRIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
A V++ + G+ L+ F L++ G +PLPPYI R
Sbjct: 114 -----DGSHYAEVLELLHNGQRLIAFYDHKTPLDQASILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L L+ K F+TLHVGAGTF V+
Sbjct: 167 ESLDAREYQSVFAKHIGAVAAPTASLHFSQNTLENLL-KDFKHTFLTLHVGAGTFASVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E I +
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEIL----QKSQEILCIGTTALRSVE-YFKRLKIPKQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + + L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHANYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|195941761|ref|ZP_03087143.1| S-adenosylmethionine: tRNA ribosyltransferase- isomerase [Borrelia
burgdorferi 80a]
Length = 343
Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats.
Identities = 127/361 (35%), Positives = 185/361 (51%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN V
Sbjct: 1 MKTKEFHFNLSYSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---V 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIDTNLFTALVSKSKKQIIGNFYKFPEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N+ E++L F+ + E +PLP YI R D D Y
Sbjct: 111 LMDEILS------KNSSEVVLKFNNNVGE--DYFEKHCFVPLPSYIK--RDYDKIDEDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 161 QTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G RI+S+ TT+LR LE++ + TN+FI P
Sbjct: 221 HFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRALESSYDNNLKKFKTGQQSTNLFIYP 280
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 281 GKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYGDAMLIL 340
Query: 358 Q 358
Sbjct: 341 N 341
>gi|15645676|ref|NP_207853.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 26695]
gi|3914525|sp|O25702|QUEA_HELPY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|2314205|gb|AAD08102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queA)
[Helicobacter pylori 26695]
Length = 345
Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIASYPVLPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LIVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKNNTALTQIK--GKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F + L ++ G +PLPPYI R
Sbjct: 114 -----DANYHAEVLELLHNGQRLIAFYDNKTPLNQENILKLLEQYGHMPLPPYIK--RAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ VGTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENPNQEAF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVS G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHFANPILHVNYLLTNFHLPKSSLLMLVSTMIGLEKTKEIYKTAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|8247949|sp|O51053|QUEA_BORBU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 343
Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 127/361 (35%), Positives = 186/361 (51%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIDTNLFTALVSKSKKQIIGNFYKFPEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N+ E++L F+ + E +PLP YI R D D Y
Sbjct: 111 LMDEILS------KNSSEVVLKFNNNVGE--DYFEKHCFVPLPSYIK--RDYDKIDEDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVGAGTF+PV+ + ++H M
Sbjct: 161 QTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGAGTFLPVRSKKVEEHNM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G RI+S+ TT+LR LE++ + TN+FI P
Sbjct: 221 HFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRALESSYDNNLKKFKTGQQSTNLFIYP 280
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 281 GKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYGDAMLIL 340
Query: 358 Q 358
Sbjct: 341 N 341
>gi|332177835|gb|AEE13525.1| Queuosine biosynthesis protein [Porphyromonas asaccharolytica DSM
20707]
Length = 425
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 129/423 (30%), Positives = 186/423 (43%), Gaps = 80/423 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD RL++ + DH ++LP L + ++ N
Sbjct: 15 INDYDYPLPDERIAEHPLAERDQCRLLMSD----ATGRLEDHTFAELPQLLPPHALLIRN 70
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMR------------VSPNSWSVYARPSKVIK 110
NT+VI A++ V+ I + SW SK +
Sbjct: 71 NTRVIKARIFFVKA-----TGARIEILCLDPYRPVSYEESLSSLGSCSWHCLVGNSKKWR 125
Query: 111 KGDIL--HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
+ GQ+ + +S + L G +P+PPY+
Sbjct: 126 PEQTISCTLPLAGGQTITLQASRAVETPDVVTFSWSDETKSFGEILELCGQLPIPPYLN- 184
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
R ++ D DYQT YA+I+GSVAAPTAGLHFT L RL++ G ++ +TLHVGAGTF+
Sbjct: 185 -RETESSDLTDYQTVYARIEGSVAAPTAGLHFTPELDDRLLAEGHRITELTLHVGAGTFL 243
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---------- 278
PVK +H MHSE + T + L V +GTTS+R LE+
Sbjct: 244 PVKGRQVAEHQMHSEYCSVPTATLETLLEHIDS--PFVPIGTTSVRTLESLYWYAVALQQ 301
Query: 279 ATTEDG-----------------------------------IINPWSG------FTNIFI 297
A E G G T + I
Sbjct: 302 AAQEGGDVAEPFHLDQWYSYRMRQSCGAALPSRREALEILLCYARHRGLGRLTFSTALLI 361
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH-AYRFYSYGDTSLL 356
PGY++ VDIL++NFH PKSTLL+LVSA G + +Y+HA++ YRF SYGD LL
Sbjct: 362 APGYQYHMVDILVTNFHQPKSTLLLLVSALIG-PRWRTLYEHALADVQYRFLSYGDACLL 420
Query: 357 FQK 359
+++
Sbjct: 421 YRQ 423
>gi|298372269|ref|ZP_06982259.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Bacteroidetes oral taxon 274
str. F0058]
gi|298275173|gb|EFI16724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Bacteroidetes oral taxon 274
str. F0058]
Length = 411
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 134/413 (32%), Positives = 197/413 (47%), Gaps = 72/413 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD++ L+ I +DLP L+S D +VFN
Sbjct: 10 INDYDYPLPSERIARYPLPERDASMLLFFDGKD-----IEKKGFADLPELLDSKDFLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NTKVI A+L V+ EI + P W V + K
Sbjct: 65 NTKVIHARLRFVKS-----TGAEIEIFCLEPLLPSDYQLSLSSVNSCVWKVMVGNLRRWK 119
Query: 111 KGDILHFFSQDG-QSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIA 167
+ DG + +E + N + F+ + + ++ +G +P+PPY+
Sbjct: 120 SETLHQTADIDGKRCNIEVRYRNPLNNMAHEVEFAWDNSDITFAQILAHLGELPIPPYLN 179
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R ++ D + YQTTY+K+ GSVAAPTAGLHFT +L RL S GI +TLH+GAGTF
Sbjct: 180 --RKTESADSLTYQTTYSKVLGSVAAPTAGLHFTDRILQRLTSKGIDSTEITLHIGAGTF 237
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK ++ +H MH+E+ + + + + IV+VGTTS+R LE+
Sbjct: 238 QPVKTDNIAEHQMHTEVFAVGLSSLELIADNIDS---IVAVGTTSVRTLESLYYIGCHIA 294
Query: 279 --------------ATTEDGIINPWS-------------------GFTNIFITPGYRFRA 305
A +G T I I PG++FR
Sbjct: 295 KNEPSPVFEVSQWEAYENNGCEMSPRKSIETIIEYMRDNKLDFIVAKTQIMIVPGFKFRI 354
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V+ L++NFH P+STLL+LVSAF G + +K+Y A+ H +RF SYGD+SLL
Sbjct: 355 VNKLITNFHQPRSTLLLLVSAFVGDDNRRKIYDFALGHNFRFLSYGDSSLLTN 407
>gi|302346566|ref|YP_003814864.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
gi|302150780|gb|ADK97041.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
Length = 423
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 127/425 (29%), Positives = 191/425 (44%), Gaps = 80/425 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L++ +S+ + +LP +L +VFN
Sbjct: 10 ISDYNYPLPDERIAKFPLTERDHSKLLLY-----KHGDVSEDIFYNLPEYLPKGALMVFN 64
Query: 63 NTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKVI A+++ + + + +W K K+G +
Sbjct: 65 NTKVIQARMHFRKETGALIEVFLMEPAQPTDYELMFQTNHECAWLCMVGNLKKWKEGALK 124
Query: 116 HFFSQDGQSRLEATVIDK--------WNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
F GQ +D+ I + + I + VG +P+PPY+
Sbjct: 125 RAFEIKGQKLTLTATMDRSKVQEQAGGTNHWIQFEWDNTNISFAEILEAVGELPIPPYLN 184
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L G+ +TLHVGAGTF
Sbjct: 185 --RATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLKALDEHGVDREELTLHVGAGTF 242
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK ++ + H MH+E + T + L V+VGTTS+R LE+
Sbjct: 243 KPVKSQEIEGHNMHTEFVVVRRQTLEKL---LKHNCHAVAVGTTSVRTLESLYYMGVKLV 299
Query: 279 ----ATTEDGIINPWSGF-----------------------------------------T 293
+D +N W + T
Sbjct: 300 LSPETAEKDLHVNQWEPYDLPHNEEGLVVVNGKVITAEDSIRHLLAYLDKDGLNVLHSST 359
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF SYGD+
Sbjct: 360 QIIIAPGYTYKIVKALVTNFHQPQSTLLLLVSAFLKGD-WRKVYDYALSHDFRFLSYGDS 418
Query: 354 SLLFQ 358
SLL
Sbjct: 419 SLLIP 423
>gi|281420090|ref|ZP_06251089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
gi|281405890|gb|EFB36570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
Length = 424
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 135/429 (31%), Positives = 197/429 (45%), Gaps = 83/429 (19%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++DLP RIA P+ RD ++L+V +SD + LP +L ++F
Sbjct: 7 KISDYNYDLPDERIAKFPIAQRDHSKLLVY-----KHGEVSDDVFHHLPTYLPQGALMIF 61
Query: 62 NNTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+L+ + E + SW K K+G +
Sbjct: 62 NNTKVIQARLHFRKETGALIEVFLMEPAEPTDYELMFQTTGHCSWLCMIGNLKKWKEGSL 121
Query: 115 LHFFSQDGQSR-LEATV-------------IDKWNTGEILLVFSISGI--ELERQISLVG 158
F G L AT+ + K + F + VG
Sbjct: 122 KRDFEIKGHKLTLSATMRRGDALGSEAQKMVAKGGGTNYWVDFDWDNDKVSFAEILEAVG 181
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
+P+PPY+ R + D YQT Y+K++GSVAAPTAGLHFT +L L + GI V
Sbjct: 182 ELPIPPYLN--RKTEESDKTTYQTVYSKVKGSVAAPTAGLHFTDAVLKDLDAHGIDREEV 239
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PVK + + H MH+E + + + L + R+++VGTTS+R +E+
Sbjct: 240 TLHVGAGTFKPVKSLEIEGHQMHTEYIVVHRRSLEKLIKHE---CRVIAVGTTSVRTIES 296
Query: 279 -------------ATTEDGIINPWSGF--------------------------------- 292
A ED +N W +
Sbjct: 297 LYYMGVHLLKHPEANEEDLHVNQWDPYELSEDGNLVDGITPMQAIQAIIDYLDRNGLEAL 356
Query: 293 ---TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
T I I PGY+++ V +L++NFH P+STLL+LVSAF + KK+Y +A+SH +RF S
Sbjct: 357 HSSTQIIIAPGYQYKIVKMLVTNFHQPQSTLLLLVSAFLKGD-WKKVYDYALSHDFRFLS 415
Query: 350 YGDTSLLFQ 358
YGD+SLL
Sbjct: 416 YGDSSLLIP 424
>gi|313886934|ref|ZP_07820637.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
gi|312923631|gb|EFR34437.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
Length = 425
Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 129/423 (30%), Positives = 187/423 (44%), Gaps = 80/423 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD RL++ + DH ++LP L + ++ N
Sbjct: 15 INDYDYPLPDERIAEHPLAERDQCRLLLSD----ATGRLEDHTFAELPQLLPPHALLIRN 70
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMR------------VSPNSWSVYARPSKVIK 110
NT+VI A++ V+ I + SW SK +
Sbjct: 71 NTRVIKARIFFVKA-----TGARIEILCLDPYRPVSYEESLSSLGSCSWHCLVGNSKKWR 125
Query: 111 KGDIL--HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
+ GQ+ + +S + L G +P+PPY+
Sbjct: 126 PEQTISCTLPLAGGQTITLQASRAVETPDVVTFSWSDETKSFGEILELCGQLPIPPYLN- 184
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
R ++ D DYQT YA+I+GSVAAPTAGLHFT L RL++ G ++ +TLHVGAGTF+
Sbjct: 185 -RETESSDLTDYQTVYARIEGSVAAPTAGLHFTPELDDRLLAEGHRITELTLHVGAGTFL 243
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---------- 278
PVK +H MHSE + T + L V +GTTS+R LE+
Sbjct: 244 PVKGRQVAEHQMHSEYCSVPTVTLETLLEHIDS--PFVPIGTTSVRTLESLYWYAVALQQ 301
Query: 279 ATTEDG--------------IINPWSG---------------------------FTNIFI 297
A E G + G T + I
Sbjct: 302 AAQEGGDVAEPFHLDQWYSYRMRQSCGAALPSRREALEILLRYARHRGLDRLTFSTALLI 361
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH-AYRFYSYGDTSLL 356
PGY++ VDIL++NFH PKSTLL+LVSA G + +Y+HA++ YRF SYGD LL
Sbjct: 362 APGYQYHMVDILVTNFHQPKSTLLLLVSALIG-PRWRTLYEHALADVQYRFLSYGDACLL 420
Query: 357 FQK 359
+++
Sbjct: 421 YRQ 423
>gi|288802174|ref|ZP_06407614.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica D18]
gi|288335141|gb|EFC73576.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica D18]
Length = 423
Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 126/425 (29%), Positives = 191/425 (44%), Gaps = 80/425 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L++ +S+ + +LP +L ++FN
Sbjct: 10 ISDYNYPLPDERIAKFPLTERDHSKLLLY-----KHGEVSEDIFYNLPEYLPKGALMIFN 64
Query: 63 NTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKVI A+++ + + + +W K K+G +
Sbjct: 65 NTKVIQARMHFRKETGALIEVFLMEPAQPTDYELMFQTNHECAWLCMVGNLKKWKEGALK 124
Query: 116 HFFSQDGQSRLEATVIDK--------WNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
F G +D+ I + + I + VG +P+PPY+
Sbjct: 125 RAFEIKGHKLTLTATMDRSKVQEQAGGTNHWIQFEWDNTNISFAEILEAVGELPIPPYLN 184
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L G+ +TLHVGAGTF
Sbjct: 185 --RATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLKALDEHGVDREELTLHVGAGTF 242
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK ++ + H MH+E + T + L K V+VGTTS+R LE+
Sbjct: 243 KPVKSQEIEGHNMHTEFVVVRRQTLEKLLKHKCH---AVAVGTTSVRTLESLYYMGVKLV 299
Query: 279 ----ATTEDGIINPWSGF-----------------------------------------T 293
+D +N W + T
Sbjct: 300 LSPETAEKDLHVNQWEPYDLPHNEEGLVVVNGKVITAEESIRHLLAYLDKDGLNVLHSST 359
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF SYGD+
Sbjct: 360 QIIIAPGYTYKIVKALVTNFHQPQSTLLLLVSAFLKGD-WRKVYDYALSHDFRFLSYGDS 418
Query: 354 SLLFQ 358
SLL
Sbjct: 419 SLLIP 423
>gi|261880535|ref|ZP_06006962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
gi|270332758|gb|EFA43544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
Length = 421
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 127/426 (29%), Positives = 188/426 (44%), Gaps = 80/426 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +++++L RIA P+ RD ++L++ + +SD + +LP +L +V
Sbjct: 7 HISDYNYELADERIAKFPLTQRDHSKLLLYNKG-----KVSDDVFYNLPNYLPEGALLVC 61
Query: 62 NNTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+++ + + SW K K+G +
Sbjct: 62 NNTRVIQARMHFRKETGALIEVFLMEPALPADYEQMFQSTGRCSWLCMVGNLKKWKEGTL 121
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEI--------LLVFSISGIELERQISLVGTIPLPPYI 166
F G +D+ T E V+ S + + VG +P+PPY+
Sbjct: 122 ERDFQIKGHRLTLTASMDRDRTQEQSGGTNYWIDFVWDNSEVNFADILETVGELPIPPYL 181
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R D YQT Y+KI GSVAAPTAGLHFT +L + + GI VTLHVGAGT
Sbjct: 182 N--REAQESDKTTYQTVYSKINGSVAAPTAGLHFTDEVLQAIDAKGITRDEVTLHVGAGT 239
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRL----------- 275
F PVK E D H MH+E I T Q L + ++VGTTS+R
Sbjct: 240 FRPVKSETIDGHSMHTEYVVIHRHTLQRLLE---HDCQAIAVGTTSVRTLESLYYMGVKL 296
Query: 276 --LETATTEDGIINPWSGF----------------------------------------- 292
T + +N W +
Sbjct: 297 SQCSDLTEDQLHVNQWEPYDLPHDAEGLVLVEDKAVTVRSAIQNLLDYLDRDNLDTLHSS 356
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T I I PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+++ +RF SYGD
Sbjct: 357 TQIIIAPGYTYKIVKMLITNFHQPQSTLLLLVSAFLKGD-WRKVYDYALANDFRFLSYGD 415
Query: 353 TSLLFQ 358
+SLL
Sbjct: 416 SSLLIP 421
>gi|149921269|ref|ZP_01909725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
gi|149817929|gb|EDM77391.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
Length = 365
Score = 281 bits (720), Expect = 1e-73, Method: Composition-based stats.
Identities = 132/370 (35%), Positives = 190/370 (51%), Gaps = 26/370 (7%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFL---------N 54
++DF+LP +IA P R +AR+ V+ + V + V L A L
Sbjct: 5 DDYDFELPTEQIAQAPASERSAARMFVL--AEAGAAVSTHSRVGALEAVLDGVAEARGQR 62
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
IV N+++V+ A+++ R + +AR ++ +++G++
Sbjct: 63 P--LIVVNDSRVVPARIHVFRATGGRVELLVVDPAALGP--GARVRAWARGARRLREGEV 118
Query: 115 LHFFSQDGQSRLE-----ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
L G++ L + VF I +L + VG +PLPPYIAR
Sbjct: 119 LRLPGAHGETALLELRYLGAEGEGEAADSRARVFEIVRGQLLDALEAVGELPLPPYIARP 178
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
DA D YQT YA+ +GSVAAPTAGLHF + +L RL V +TLHVG GTF+P
Sbjct: 179 EGPDAADRERYQTLYARHRGSVAAPTAGLHFDAAMLERLE-----VAPITLHVGPGTFLP 233
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINP 288
+ ED H + SE I +A + + ++ G I++VGTT+ R LE+ A G I P
Sbjct: 234 MDTEDVRAHRVGSERYSISEASAARIEAARAEGRPILAVGTTATRTLESVALANGGAIVP 293
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
SG T + ITPGYRF VD+L++NFHLP+S+LLMLV G E Y A++ YRFY
Sbjct: 294 GSGRTELVITPGYRFSVVDLLLTNFHLPRSSLLMLVCCLGGRERVLAAYAEAVAAGYRFY 353
Query: 349 SYGDTSLLFQ 358
SYGD L+ +
Sbjct: 354 SYGDCMLVER 363
>gi|303235656|ref|ZP_07322263.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
gi|302484103|gb|EFL47091.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
Length = 430
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 128/426 (30%), Positives = 197/426 (46%), Gaps = 80/426 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D+ LP RIA P+ RD ++L++ +S+ + +LP +L + +VF
Sbjct: 16 KISDYDYPLPDERIAKFPLNQRDQSKLLLY-----KHGEVSEDVFCNLPKYLPNGALMVF 70
Query: 62 NNTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+++ + + + S SW K K+G++
Sbjct: 71 NNTKVIQARMHFRKETGALIEIFLMEPAQPTDYELMFQTNSECSWLCMIGNLKKWKEGEL 130
Query: 115 LHFFSQDGQSRLEATVIDK--------WNTGEILLVFSISGIELERQISLVGTIPLPPYI 166
F +G + +D+ + + + + + VG +P+PPY+
Sbjct: 131 RRSFEINGNKLVLTVSVDRSKASDLAGGTNHWVDFKWDNAKVSFAEILEAVGELPIPPYL 190
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R D YQT Y+KI+GSVAAPTAGLHFT +L +L GI +TLHVGAGT
Sbjct: 191 N--RETQESDKETYQTVYSKIKGSVAAPTAGLHFTDAVLEQLDKAGILRDELTLHVGAGT 248
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------- 278
F PVK + + H MH+E + T + L S ++VGTTS+R LE+
Sbjct: 249 FKPVKSSEIEGHNMHTEYIVVHRHTLENL---LSHDCSAIAVGTTSVRTLESLYYMGVKL 305
Query: 279 -----ATTEDGIINPWSGF----------------------------------------- 292
AT +D +N W +
Sbjct: 306 ERNANATEDDLHVNQWEPYDENVTEEGFIKVNGQVVTAQKAIQNLLDYLKKDDLEALHSS 365
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T I I PG++++ V +L++NFH P+STLL+LVSAF + K+Y +A+ H +RF SYGD
Sbjct: 366 TQIIIAPGFQYKIVKMLVTNFHQPQSTLLLLVSAFL-HGDWHKVYDYALQHDFRFLSYGD 424
Query: 353 TSLLFQ 358
+SLL
Sbjct: 425 SSLLIP 430
>gi|226321149|ref|ZP_03796690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 29805]
gi|226233441|gb|EEH32181.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 29805]
Length = 343
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 121/361 (33%), Positives = 185/361 (51%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIGTNLFTALVSKSKKQIIGNFYKFPEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++ K ++ +L + G + +PLP YI R D D Y
Sbjct: 111 -----LMGEILSKNSSEVVLKFNNDVGED---YFEKHCFVPLPSYIK--RDYDKIDEDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TA LHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 161 QTIYSKYVGSAASATAELHFSIDLFSVFENNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G +I+S+ TT+LR LE++ + TN+FI P
Sbjct: 221 HFETFLIKDFVAVRLQNAKLLGKKILSIVTTTLRALESSYDNNLKKFKTGKQSTNLFIYP 280
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ D+L +NFH+P+STLLMLVS+F G + Y+ A++ Y+F+SYGD L+
Sbjct: 281 GKNYCFKFFDMLFTNFHIPQSTLLMLVSSFAGKDFVFSSYEEAVNKGYKFFSYGDAMLIL 340
Query: 358 Q 358
Sbjct: 341 N 341
>gi|325860315|ref|ZP_08173437.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
gi|325482194|gb|EGC85205.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
Length = 423
Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 125/425 (29%), Positives = 189/425 (44%), Gaps = 80/425 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP +RIA P+ RD ++L++ +S+ LP +L +VFN
Sbjct: 10 ISDYNYPLPDARIAKFPLSERDHSKLLLY-----KHGEVSEDKFYQLPEYLPKGALMVFN 64
Query: 63 NTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKVI A+++ + + + +W K K+G +
Sbjct: 65 NTKVIQARMHFRKETGALIEVFLMEPAQPTDYELMFQTNHACAWLCMVGNLKKWKEGALR 124
Query: 116 HFFSQDGQSRLEATVIDK--------WNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
F G +D+ + + + + + VG +P+PPY+
Sbjct: 125 RAFEIKGHKLTLTATMDRSKVQEQAGGTNHWVNFEWDNTNVSFAEILEAVGELPIPPYLN 184
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI +TLHVGAGTF
Sbjct: 185 --RATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLEALDEHGIDREELTLHVGAGTF 242
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK + + H MH+E + T + L G R ++VGTTS+R LE+
Sbjct: 243 KPVKSHEIEGHSMHTEFIVVRRQTLEKL---LKHGCRAIAVGTTSVRTLESLYYMGVKLV 299
Query: 279 ----ATTEDGIINPWSGF-----------------------------------------T 293
+D +N W + T
Sbjct: 300 SDPETAEKDLHVNQWEPYDLPHNAEGLVETDGKVITVEDAVRHLLAYLDRDGLNALHSST 359
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+ H +RF SYGD+
Sbjct: 360 QIIIAPGYTYKIVKALVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALGHNFRFLSYGDS 418
Query: 354 SLLFQ 358
SLL
Sbjct: 419 SLLIP 423
>gi|282858829|ref|ZP_06267974.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
gi|282588398|gb|EFB93558.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
Length = 423
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 123/425 (28%), Positives = 189/425 (44%), Gaps = 80/425 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD+++L++ + + + +LP +L +VFN
Sbjct: 10 ISDYNYLLPDERIAKFPLAKRDNSKLLLY-----KHGDVVEDIFYNLPKYLPKGGLMVFN 64
Query: 63 NTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKVI A+++ + + + SW K K G +
Sbjct: 65 NTKVIQARIHFRKETGALIEVFLLEPTAPTDYELMFQTTHTCSWLCMVGNLKKWKDGVLK 124
Query: 116 HFFSQDGQSRLEATVIDK--------WNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
F G +++ I + + + + +VG +P+PPY+
Sbjct: 125 REFEIKGHKLTLIASLNRDKTANTPGGTNHWIDFSWDNANVSFAEILEMVGELPIPPYLN 184
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L + GI +TLHVGAGTF
Sbjct: 185 --RETEESDKETYQTVYSKIKGSVAAPTAGLHFTPEVLQALDASGIVRDELTLHVGAGTF 242
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T + L + ++VGTTS+R LE+
Sbjct: 243 KPVKSEEIEGHNMHTEYVVVHRHTLENLLAHDCS---AIAVGTTSVRTLESLYYMGVHLA 299
Query: 279 -------ATTEDGIINPWS--------------------------------------GFT 293
A P+ T
Sbjct: 300 INPDATEAELHVNQWEPYDLEHNEAGLVIINGKVITVASAIENILNYLKKDNLQALHSST 359
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PG+ ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF SYGD+
Sbjct: 360 QIIIAPGFTYKIVKALVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALSHDFRFLSYGDS 418
Query: 354 SLLFQ 358
SLL
Sbjct: 419 SLLIP 423
>gi|315453597|ref|YP_004073867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter felis ATCC 49179]
gi|315132649|emb|CBY83277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter felis ATCC 49179]
Length = 341
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 112/355 (31%), Positives = 179/355 (50%), Gaps = 23/355 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ + +DLP IA P+ P + A+L+V I+ + + F + +V N
Sbjct: 10 LSSYHYDLPAEYIASTPLLPPERAKLLVYKRATG---RITHSTFAHVFDFFPQDALVVLN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + ++ +H S + ++ + + +G ++ Q
Sbjct: 67 DTKVIKARLYGRKAS-----GGKVELLIHNPHSLHHFNAQIK--GRVPQGGLIEL-DQGY 118
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + + E+ + L+G +P+PPY+ R D YQ+
Sbjct: 119 SCEVLTPPANLRQVCFYHHQHPLKWEEVLDMLELLGHMPIPPYLK--RADTPTDTQTYQS 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK G++AAPTA LHF+ + L++ + F+TLHVGAGTF+ V+ ED H MHS
Sbjct: 177 VFAKHAGAIAAPTASLHFSESAKEHLLA-HFQHAFLTLHVGAGTFVGVECEDIRQHPMHS 235
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E FI T +AL I+ VGTT+LR +E ++ P ++F+ PG
Sbjct: 236 EALFIPEETQRAL----DHAPYILCVGTTALRGVEHYKR-GNVLKP----CDLFLHPGNP 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
V L++NFHLPKSTL+MLV++ G+E+ ++Y+ AI H YRFYSYGD L+
Sbjct: 287 VSHVQALLTNFHLPKSTLIMLVASMVGLEKCLELYKIAIEHHYRFYSYGDGMLIL 341
>gi|116329699|ref|YP_799418.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332583|ref|YP_802300.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122592|gb|ABJ80485.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116127450|gb|ABJ77542.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 347
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 127/359 (35%), Positives = 183/359 (50%), Gaps = 18/359 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+KEF+F L RIA P RD +RLMV+ N+ + S+ +L ++L D +V N
Sbjct: 6 LKEFEFTLSEERIARYPAANRDESRLMVLDVNVG--NIFSESSFKNLVSYLKEGDVLVAN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV ++ + L W R SK +K G L D
Sbjct: 64 HTKVSKRRVYLKTQIRTHETMFLEEKELL-------WKCKIRNSKKLKVGTKLS----DE 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+++ + ++K + L + E +G IP+PPY R D +D + YQT
Sbjct: 113 KTQRISFTVEKKEGEFVFLKPEQTLQE--EDFQQIGEIPIPPYFK--RNPDPKDEIRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK GSVAAPTAGLHF+ ++ L I+ + L VG GTF P+ E+ + +H
Sbjct: 169 LFAKTPGSVAAPTAGLHFSESIFQTLKEKKIRFCTLELKVGYGTFQPLTEENFQNQKLHR 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITPGY 301
E F++ + + LN K G RI S+GTT+LR LE+A G T +FI P
Sbjct: 229 EEFFLEKSSTEILNLAKKEGRRIFSIGTTTLRALESAYDYATNSFRSGRGATELFIQPED 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
R ++ + L++NFHLP S+LL+LVSAF G E K YQ AI +RF+SYGD L+ KR
Sbjct: 289 RLKSCECLITNFHLPSSSLLLLVSAFAGKELVLKAYQKAIQEKFRFHSYGDAMLILGKR 347
>gi|327313510|ref|YP_004328947.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
gi|326944593|gb|AEA20478.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
Length = 436
Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats.
Identities = 125/425 (29%), Positives = 189/425 (44%), Gaps = 80/425 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP +RIA P+ RD ++L++ +S+ LP +L +VFN
Sbjct: 23 ISDYNYPLPDARIAKFPLSERDHSKLLLY-----KHGEVSEDKFYQLPEYLPKGALMVFN 77
Query: 63 NTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKVI A+++ + + + +W K K+G +
Sbjct: 78 NTKVIQARMHFRKETGALIEVFLMEPAQPTDYELMFQTNHACAWLCMVGNLKKWKEGALR 137
Query: 116 HFFSQDGQSRLEATVIDK--------WNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
F G +D+ + + + + + VG +P+PPY+
Sbjct: 138 RTFEIKGHKLTLTATMDRSKVQEQAGGTNHWVNFEWDNTNVSFAEILEAVGELPIPPYLN 197
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI +TLHVGAGTF
Sbjct: 198 --RATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLEALDEHGIDREELTLHVGAGTF 255
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK + + H MH+E + T + L G R ++VGTTS+R LE+
Sbjct: 256 KPVKSHEIEGHSMHTEFIVVRRQTLEKL---LKHGCRAIAVGTTSVRTLESLYYMGVKLV 312
Query: 279 ----ATTEDGIINPWSGF-----------------------------------------T 293
+D +N W + T
Sbjct: 313 SDPETAEKDLHVNQWEPYDLPHNAEGLVETDGKVITVEDAVRHLLAYLDRDGLNALHSST 372
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+ H +RF SYGD+
Sbjct: 373 QIIIAPGYTYKLVKALVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALGHDFRFLSYGDS 431
Query: 354 SLLFQ 358
SLL
Sbjct: 432 SLLIP 436
>gi|258647281|ref|ZP_05734750.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
gi|260852936|gb|EEX72805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
Length = 409
Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats.
Identities = 128/416 (30%), Positives = 192/416 (46%), Gaps = 77/416 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+K++++ LP RIA PV PRD ++L++ +S+ +LP +L +VF
Sbjct: 8 QIKDYNYTLPEDRIAKYPVAPRDHSKLLLYR-----DGRVSEDSFYNLPTYLKPGALMVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I +P W+ K
Sbjct: 63 NNTKVIFARLHFQKA-----TGALIEIFCLEPHTPADYQQSFAATRRVTWTCLVGNMKKW 117
Query: 110 KKGDILHFFS-QDGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + D + L A TG + + + + +G +P+PPY+
Sbjct: 118 KEGRLERTVKVGDRELLLTAEHKGPAGTGFEIAFDWGDDAVSFSEVLDAIGELPIPPYLN 177
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D +YQT Y+KI+GSVAAPTAGLHFT ++L RL GI +TLHVGAGTF
Sbjct: 178 --RQTEQSDLNNYQTVYSKIEGSVAAPTAGLHFTDDVLRRLDEAGIVREEITLHVGAGTF 235
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + + L + ++VGTTS+R LE+
Sbjct: 236 KPVKSEEIEGHTMHAEWIAVSRQNIEHLLAHDCS---CIAVGTTSVRTLESLYYIGVLIH 292
Query: 279 --------------------------------------ATTEDGIINPWSGFTNIFITPG 300
A + ++ T I I PG
Sbjct: 293 RNPHVAPEDLHVPQWLPYEYETSTEEKLTPEAALREILAYLDRNRMSVLHTATQIIIAPG 352
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y ++ V +++NFH P+STLL+LVSAF G + +Y +A++H +RF SYGD+SLL
Sbjct: 353 YTYKIVKTMVTNFHQPQSTLLLLVSAFVG-GNWRTIYDYALAHDFRFLSYGDSSLL 407
>gi|89099002|ref|ZP_01171882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
gi|89086406|gb|EAR65527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
Length = 269
Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 109/283 (38%), Positives = 148/283 (52%), Gaps = 16/283 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF LP IA P+ R S+RLMV+ + +LP +LN D +V
Sbjct: 1 MKVEMFDFHLPEELIAQTPLEDRTSSRLMVLDKEDGA---LQHETFKNLPEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + +I L + + W +P+K +K+G + F
Sbjct: 58 LNDTRVLPARLFGAK----EGTGAKIEVLLLKQQEGDVWETLIKPAKRVKEGTRIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A G LL F+ GI + +G +PLPPYI + Y
Sbjct: 111 -GDGLLSAVCTGTEEQGGRLLKFNYEGI-FYEVLEQLGEMPLPPYIKEQLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV VED +H M
Sbjct: 165 QTVYAKERGSAAAPTAGLHFTEELLDEIREKGVHIAFITLHVGLGTFRPVSVEDIHEHSM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
H+E + TA+ LN V+ GGRI++VGTTS R LET +
Sbjct: 225 HAEYYQVTEGTARLLNEVRENGGRIITVGTTSTRTLETIADAN 267
>gi|325268978|ref|ZP_08135599.1| queuine tRNA-ribosyltransferase [Prevotella multiformis DSM 16608]
gi|324988599|gb|EGC20561.1| queuine tRNA-ribosyltransferase [Prevotella multiformis DSM 16608]
Length = 423
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 127/425 (29%), Positives = 189/425 (44%), Gaps = 80/425 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++ + LP SRIA P+ RD ++L++ +S+ LP +L +VFN
Sbjct: 10 ISDYSYPLPDSRIAKFPLAERDHSKLLLYRHG-----EVSEDTFYRLPEYLPEGALMVFN 64
Query: 63 NTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKVI A+++ + + +W K K+G +
Sbjct: 65 NTKVIQARMHFRKETGALIEVFLMEPARPTDYELMFQTNHACAWLCMVGNLKKWKEGSLK 124
Query: 116 HFFSQDGQSRLEATVIDK--------WNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
F G +D+ I + + + + VG +P+PPY+
Sbjct: 125 RVFEIKGHRLTLTAAMDRSREQELAGGTHHWISFEWDNTNVSFAEILEAVGELPIPPYLN 184
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+K++GSVAAPTAGLHFT +L L GI +TLHVGAGTF
Sbjct: 185 --RATEESDKETYQTVYSKVKGSVAAPTAGLHFTDKVLKSLDGHGIDREELTLHVGAGTF 242
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK + + H MH+E + T + L G ++VGTTS+R LE+
Sbjct: 243 KPVKSREIEGHSMHTEFVVVRRQTLEKL---LKHGCCAIAVGTTSVRTLESLYYMGVKLV 299
Query: 279 ----ATTEDGIINPWSGF-----------------------------------------T 293
A +D ++ W + T
Sbjct: 300 SDPDAAEKDLHVDQWEPYDLPHNAEGLVEVDGRAVTVEDAVRQLLAYLDRDGLDVLHSST 359
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY ++ V IL++NFH P+STLL+LVSAF + +K+Y +A+SH +RF SYGD+
Sbjct: 360 QIIIAPGYDYKIVKILVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALSHEFRFLSYGDS 418
Query: 354 SLLFQ 358
SLL
Sbjct: 419 SLLIP 423
>gi|285808237|gb|ADC35771.1| queuosine biosynthesis protein [uncultured bacterium 293]
Length = 310
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 122/317 (38%), Positives = 169/317 (53%), Gaps = 18/317 (5%)
Query: 48 DLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--------W 99
DLPA L D +V N ++VI A+L+G R L W
Sbjct: 3 DLPALLQPGDLLVLNRSRVIPARLHGRRASGQPA-----EVLLLQPADGEKARGGPRESW 57
Query: 100 SVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
RP K ++ GD + L G + + +E+ I G
Sbjct: 58 HALLRPGKRLRAGDSISIGDDLT---LHVEDAPAQADGRRRVTLVAARGTVEQAIERDGH 114
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PLPPYI +R D + YQT YA+ +GSVAAPTAGLH + + + L + G++ V
Sbjct: 115 VPLPPYI--RRGDTPADRLRYQTIYARERGSVAAPTAGLHLSERVFTALRARGVEWTEVL 172
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
LHVG GTF PV+ E +DH + E I A A+ + ++RGGR+V+VGTT++R LE+A
Sbjct: 173 LHVGPGTFQPVRAEQVEDHRLPPEPAVIPEEAAAAVAAARARGGRVVAVGTTAVRALESA 232
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
+DG + P + T++ I PGYRFR VD L++NFHLP+S+LL+LV+AF E Y H
Sbjct: 233 AGDDGRLRPGARETDLVIVPGYRFRVVDALLTNFHLPRSSLLLLVAAFTSRERVLDAYAH 292
Query: 340 AISHAYRFYSYGDTSLL 356
A+ YRFYSYGD LL
Sbjct: 293 AVRAGYRFYSYGDAMLL 309
>gi|317969076|ref|ZP_07970466.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CB0205]
Length = 340
Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 126/343 (36%), Positives = 178/343 (51%), Gaps = 16/343 (4%)
Query: 21 FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHIN 80
PR +ARL+ + C S V +L L D +V NNT+V+ A+L R
Sbjct: 2 EPRHAARLLALEGPEGC----SHQTVWELQQLLKPGDLLVVNNTRVLKARLQARRPS--- 54
Query: 81 RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEIL 140
+ + V + W A+P+K +K G+IL + V TG +
Sbjct: 55 --GGAVELLVLEPVEGSDWLCLAKPAKRLKPGEILQMEHPGQPLQPLEIVAIDAETGGRV 112
Query: 141 LVF---SISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAG 197
+ F + +E ++ G IPLPPYI + D YQT YA G+VAAPTAG
Sbjct: 113 VRFPAECTTPEAIEALLARYGEIPLPPYIHQHSSEDD---SRYQTRYASRPGAVAAPTAG 169
Query: 198 LHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNS 257
LH + LL L + G++ VTLHVG GTF PV+ ED +HSE + A +A+
Sbjct: 170 LHLSDALLEALEARGVQRTTVTLHVGLGTFRPVETEDLTQLELHSEWVEVSAAAVEAVAQ 229
Query: 258 VKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLP 316
++RGGR+++VGTTS+R LE G + P +G N+ I PGYRF V L++NFHLP
Sbjct: 230 CRARGGRVIAVGTTSVRSLEAVAQLHGGELQPHAGPVNLVIQPGYRFAVVQGLLTNFHLP 289
Query: 317 KSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
KS+LL+LVSA G +Y+ A + YRF+SYGD + +
Sbjct: 290 KSSLLLLVSALVGRRRLLDLYEEAKAEGYRFFSYGDAMWIAPE 332
>gi|299140490|ref|ZP_07033628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
gi|298577456|gb|EFI49324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
Length = 416
Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 128/421 (30%), Positives = 198/421 (47%), Gaps = 75/421 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+D+ LP RIA P+ RD ++L++ +SD + +LP +L + +V+
Sbjct: 7 KISEYDYVLPDERIAKFPLPQRDHSKLLIYEHG-----KVSDDVFFNLPKYLPQHALMVY 61
Query: 62 NNTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+++ + + SW K K+G +
Sbjct: 62 NNTRVIQARMHFRKETGALIEVFLMEPAAPTDYELMFQTKGQCSWLCMIGNLKKWKEGSL 121
Query: 115 LHFFSQDGQSR-----LEATVIDKWNTGEIL---LVFSISGIELERQISLVGTIPLPPYI 166
F G+ L TG + + I + +VG +P+PPY+
Sbjct: 122 KRDFDIKGEHLTLSVLLNYEKSAHGATGTNYWVDFSWDNANINFAEILEVVGELPIPPYL 181
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R + D + YQT Y+KI+GSVAAPTAGLHFT ++L + + GI+ VTLHVGAGT
Sbjct: 182 N--RETEESDKLTYQTVYSKIKGSVAAPTAGLHFTDDVLRAIEARGIEREEVTLHVGAGT 239
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------- 278
F PVK ++ H MH+E + T L + + ++VGTTS+R LE+
Sbjct: 240 FKPVKSKEIYGHEMHTEYIVVHRHTLVNLIKYE---CKAIAVGTTSVRTLESLYYMGVKL 296
Query: 279 -----ATTEDGIINPWSGF------------------------------------TNIFI 297
AT E+ ++ W + T I I
Sbjct: 297 ENNPDATEEELHVSQWEPYEREREGGLINGITPVHAIQNLIDWLDKAGVEVLHSSTQILI 356
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+++ +RF SYGD+SLL
Sbjct: 357 APGYEYKIVKMLVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALANNFRFLSYGDSSLLI 415
Query: 358 Q 358
Sbjct: 416 P 416
>gi|268680076|ref|YP_003304507.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurospirillum deleyianum DSM 6946]
gi|268618107|gb|ACZ12472.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurospirillum deleyianum DSM 6946]
Length = 308
Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats.
Identities = 120/334 (35%), Positives = 178/334 (53%), Gaps = 31/334 (9%)
Query: 29 MVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISC 88
MV + + I+ L FL + ++ N+T+V+ A++ G + EI
Sbjct: 1 MVFNRSSG---QITHTFFKHLFDFLPEDIGVLLNDTRVVKARIFGKKES-----GGEIEL 52
Query: 89 TLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI 148
L+ + N +SVY + +KKG L F + LEA +I+ G L+ F
Sbjct: 53 LLNAPLQENLYSVYIK--GRVKKGMRLFF-----DADLEAELIELKEDGTRLVAFFRKNE 105
Query: 149 ELERQI-----SLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSN 203
L + ++G IPLPPYI R D VDYQT +AK QG+VAAPTA LHFT +
Sbjct: 106 ALHTKALFDILEIIGHIPLPPYIK--REDQEEDSVDYQTVFAKEQGAVAAPTASLHFTDS 163
Query: 204 LLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGG 263
+ L + +F+TLHVGAGTF PV+ E +H+MHSEI I T + +
Sbjct: 164 MFEAL-KKRYETHFLTLHVGAGTFKPVEAEHILEHVMHSEIYTIPELTCKLI----ESKK 218
Query: 264 RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLML 323
+++VGTT R +E + + G ++F+ P V+ L++NFHLPKSTL+ML
Sbjct: 219 PLLAVGTTVTRTVEYYARTNIPV----GKCDLFLHPNNPPLRVNHLLTNFHLPKSTLIML 274
Query: 324 VSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
V++F GIE+T ++Y+ A+ YRF+SYGD L+
Sbjct: 275 VASFIGIEKTLELYEEAVKEKYRFFSYGDAMLII 308
>gi|281423270|ref|ZP_06254183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
gi|281402606|gb|EFB33437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
Length = 416
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 123/421 (29%), Positives = 199/421 (47%), Gaps = 75/421 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+D+ LP RIA P+ RD ++L++ +SD + +LP +L + +V+
Sbjct: 7 KISEYDYVLPDERIAKFPLPQRDHSKLLMYEHG-----KVSDDVFFNLPKYLPQHALMVY 61
Query: 62 NNTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+++ + + SW K K+G +
Sbjct: 62 NNTRVIQARMHFRKETGALIEVFLMEPAAPTDYELMFQTKGQCSWLCMIGNLKKWKEGSL 121
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEI--------LLVFSISGIELERQISLVGTIPLPPYI 166
F G+ + +++ + + + I + + G +P+PPY+
Sbjct: 122 KRDFDIKGEHLTLSVLLNYEKSAHRATGTNYWVDFSWDNANINFAEILEVAGELPIPPYL 181
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R + D + YQT Y+KI+GSVAAPTAGLHFT ++L + + GI+ VTLH+GAGT
Sbjct: 182 N--RETEESDKLTYQTVYSKIKGSVAAPTAGLHFTDDVLRAIEARGIEREEVTLHIGAGT 239
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------- 278
F PVK ++ H MH+E + T L + + ++VGTTS+R LE+
Sbjct: 240 FKPVKSKEIYGHEMHTEYIVVHRHTLVNLIKYE---CKAIAVGTTSVRTLESLYYMGVKL 296
Query: 279 -----ATTEDGIINPWSGF------------------------------------TNIFI 297
AT E+ ++ W + T I I
Sbjct: 297 ENNPDATEEELHVSQWEPYEKAREGGLINGITPVHAIQNLIDWLDKAGVEVLHSSTQILI 356
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+++ +RF SYGD+SLL
Sbjct: 357 APGYEYKIVKMLVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALANNFRFLSYGDSSLLI 415
Query: 358 Q 358
Sbjct: 416 P 416
>gi|153853722|ref|ZP_01995078.1| hypothetical protein DORLON_01069 [Dorea longicatena DSM 13814]
gi|149753472|gb|EDM63403.1| hypothetical protein DORLON_01069 [Dorea longicatena DSM 13814]
Length = 194
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 96/197 (48%), Positives = 125/197 (63%), Gaps = 4/197 (2%)
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PLPPYI + YQT YA GS AAPTAGLHFT LL + G+ + VT
Sbjct: 1 MPLPPYITHQLED----KNRYQTVYATHTGSAAAPTAGLHFTPELLEEIKEKGVDIARVT 56
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
LHVG GTF PVKV++ +H MHSE ID A+ +N K G R++ VGTTS R +E+A
Sbjct: 57 LHVGLGTFRPVKVDEITEHHMHSEFFMIDEEAAEKINRAKETGHRVICVGTTSCRTVESA 116
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
E+G + SG+T IFI PGY+F+ +D L++NFHLP+STL+MLVSA G E Y+
Sbjct: 117 ADENGHLEAKSGWTQIFIYPGYKFKVLDCLITNFHLPESTLIMLVSALAGREHVLAAYEE 176
Query: 340 AISHAYRFYSYGDTSLL 356
A+ YRF+S+GD +
Sbjct: 177 AVKERYRFFSFGDAMFI 193
>gi|257487220|ref|ZP_05641261.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 213
Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats.
Identities = 107/200 (53%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
+PLPPYI RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FV
Sbjct: 1 KMPLPPYI--DRPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFV 58
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PV+VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+
Sbjct: 59 TLHVGAGTFQPVRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLES 118
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A DG + P+SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y
Sbjct: 119 AAR-DGELKPFSGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYA 177
Query: 339 HAISHAYRFYSYGDTSLLFQ 358
AI H YRF+SYGD + +
Sbjct: 178 AAIEHGYRFFSYGDAMFITR 197
>gi|148925938|ref|ZP_01809625.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8486]
gi|145844924|gb|EDK22028.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8486]
Length = 339
Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 173/350 (49%), Gaps = 31/350 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKN---KEIFHTTFKNLHDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFKE 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDA 174
L+A V++ N G + F + L+ +G IPLPPYI R +
Sbjct: 116 D-----LKARVVELLNDGLRKVHFFQNDKTLDTSNLYNLLDKIGHIPLPPYIK--REDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIY-HLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + + I+ VGTT R +E T +GF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEII----DSKQAILGVGTTVTRTIEYYTRT----KTKNGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEN 329
>gi|282879642|ref|ZP_06288373.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
gi|281306590|gb|EFA98619.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
Length = 432
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 118/437 (27%), Positives = 184/437 (42%), Gaps = 91/437 (20%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++ ++LP RIA P+ RD ++L++ + + + + +L +L ++F
Sbjct: 7 HISDYQYELPDERIAKFPIAQRDHSKLLIYNHG-----KVGEDVFYNLYEYLPQGALMIF 61
Query: 62 NNTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A+++ + + +W K K G +
Sbjct: 62 NNTKVIQARMHFKKDTGALIEVFLMEPAMPADYEQIFQSKRHCAWYCMIGNLKKWKSGSL 121
Query: 115 LHFF--------------SQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVG 158
+ A + + + F + + +G
Sbjct: 122 TRIYHINQKSVTLQVTRREPATDEHQPAQGLHATPSTHHWIDFDWDAEDVSFAEILESIG 181
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
+P+PPY+ R D YQT Y+KI+GSVAAPTAGLHFT+++L L GI +
Sbjct: 182 ELPIPPYLN--RETQESDKTTYQTVYSKIKGSVAAPTAGLHFTNSVLQSLDEHGIDREEL 239
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PVK E+ H MH+E + T + L ++VGTTS+R LE+
Sbjct: 240 TLHVGAGTFKPVKSEEIKGHAMHTEYICVHRQTLEKL---LRHNVEAIAVGTTSVRTLES 296
Query: 279 AT----------------------------TEDGIINPWSG------------------- 291
DG + G
Sbjct: 297 LYYMGVFLETHPDATEDELHVKQWAPYERLHTDGQVEHLDGGLIDNISPKQAIQNVLDYL 356
Query: 292 ----------FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
T I I PGY+++ V +L++NFH P+STLL+LVSAF + + +Y +A+
Sbjct: 357 VRNELESLHSSTQIIIAPGYQYKIVKMLITNFHQPQSTLLLLVSAFVNGD-WRTIYDYAL 415
Query: 342 SHAYRFYSYGDTSLLFQ 358
+H +RF SYGD+SLL
Sbjct: 416 AHQFRFLSYGDSSLLIP 432
>gi|322379073|ref|ZP_08053476.1| tRNA ribosyltransferase [Helicobacter suis HS1]
gi|322379937|ref|ZP_08054214.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter suis HS5]
gi|321147635|gb|EFX42258.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter suis HS5]
gi|321148565|gb|EFX43062.1| tRNA ribosyltransferase [Helicobacter suis HS1]
Length = 349
Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 113/354 (31%), Positives = 173/354 (48%), Gaps = 24/354 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+ + LP IA P+ P++ A+LM+ ++ + + F N IV N+T
Sbjct: 19 SYTYHLPKHLIASHPIKPKEEAKLMIYER---ARNRLTHTTFAHIFEFFPKNALIVLNDT 75
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A+L G + + +H + + G IL
Sbjct: 76 KVIKARLFGRKKS-----GHLVEILIHHPKDNFC---LVQIRGKVHVGLILQLDHGYFCQ 127
Query: 125 RLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
LE G + +E+ + ++G +P+PPY+ R + +D DYQ+
Sbjct: 128 VLEVLSNGMRLVGFFKESGHFLEWVEVLDMLEILGHMPIPPYLK--RADEIKDLQDYQSV 185
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+AK G++AAPTA LHF+ + + K F+TLHVGAGTF+ V+ ED +H MHSE
Sbjct: 186 FAKNLGAIAAPTASLHFSEST-KAYLLSHFKHAFLTLHVGAGTFLGVECEDIREHGMHSE 244
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
I T QAL I+ +GTT+LR +E G P N+F+ G
Sbjct: 245 FVDIPLITQQAL----DHAPCILCIGTTALRAVEHYKR--GFKTPH---CNLFLHAGNPV 295
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ V L++NFHLP+STL+MLV++ G+++ ++Y+ AI H YRFYSYGD L+
Sbjct: 296 KHVQALLTNFHLPQSTLIMLVASMLGLDKCLELYKQAIKHHYRFYSYGDGMLIL 349
>gi|255589610|ref|XP_002535022.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Ricinus communis]
gi|223524180|gb|EEF27363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Ricinus communis]
Length = 266
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 115/270 (42%), Positives = 155/270 (57%), Gaps = 10/270 (3%)
Query: 89 TLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI 148
+ +S + S+ K G +LH L ++ + +
Sbjct: 1 MIDRVLSEQEAYAQIKSSRSPKAGSLLHLSGDYQAEVL-------GRQADMFHIRLLGNE 53
Query: 149 ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
+ G +PLPPYI K DA D YQT +AK G+VAAPTAGLHF LL L
Sbjct: 54 SWYDFLEQYGQLPLPPYIEHK--ADAADDTRYQTVFAKHAGAVAAPTAGLHFDEALLQAL 111
Query: 209 ISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSV 268
I+ G+ V +VTLHVGAGTF PVKV++ +H MHSE+ + T + + ++ G R+ +V
Sbjct: 112 INKGVHVRYVTLHVGAGTFQPVKVDNIAEHHMHSEVYHLPEETISTILNARANGKRVTAV 171
Query: 269 GTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC 328
GTTSLR LE+A G + G TNIFITPG+ F+ VD L++NFHLPKSTL+MLVSAF
Sbjct: 172 GTTSLRTLESAA-HVGKLFAHHGDTNIFITPGFEFKLVDRLITNFHLPKSTLMMLVSAFG 230
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G + +K Y HAI +YRF+SYGD L+ +
Sbjct: 231 GYDLMRKAYAHAIDQSYRFFSYGDAMLITR 260
>gi|300727139|ref|ZP_07060558.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
gi|299775683|gb|EFI72274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
Length = 424
Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 124/429 (28%), Positives = 191/429 (44%), Gaps = 83/429 (19%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++ +DLP RIA P+ RD ++L++ +S+ + ++P L +V
Sbjct: 7 KISDYSYDLPDERIAKFPLSQRDHSKLLLY-----KHGEVSEDVFYNIPNHLPKGALMVC 61
Query: 62 NNTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+++ + + +W K K+G +
Sbjct: 62 NNTRVIQARMHFRKATGALIEVFLMEPAAPTDYELMFQTTGHCAWLCMIGNLKKWKEGSL 121
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEIL----------------LVFSISGIELERQISLVG 158
FS +G + + ++ + + VG
Sbjct: 122 KRDFSINGHEFTLVASLRRGEALTPEQEKLTTHSGGTNYWVDFEWNTEKVNFAEILEAVG 181
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
+P+PPY+ R D YQT Y+KI+GSVAAPTAGLHFT ++LS L GI V
Sbjct: 182 ELPIPPYLN--RETQESDKTTYQTVYSKIKGSVAAPTAGLHFTDSVLSDLDKHGIVRDEV 239
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PVK + D H MH+E + T + L ++VGTTS+R LE+
Sbjct: 240 TLHVGAGTFKPVKSVEIDGHEMHTEYIVVHRHTFERLLEHDCS---AIAVGTTSVRTLES 296
Query: 279 -------------ATTEDGIINPWSGF--------------------------------- 292
A+ ++ ++ W+ +
Sbjct: 297 LYYMGVYLEHHPDASEDELHVHQWTPYDDGRDGKLVDGITAVKAMQNILDYLDRNNLEAL 356
Query: 293 ---TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
T I I PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF S
Sbjct: 357 HSSTQIIIAPGYEYKIVKMLITNFHQPQSTLLLLVSAFLKGD-WRKVYDYALSHEFRFLS 415
Query: 350 YGDTSLLFQ 358
YGD+SLL
Sbjct: 416 YGDSSLLIP 424
>gi|227874424|ref|ZP_03992605.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
gi|227839740|gb|EEJ50189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
Length = 207
Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 96/207 (46%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
Query: 150 LERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLI 209
E + +G +PLPPYI K Y T YAK +GS AAPTAGLH+T LL +
Sbjct: 4 FEEVLDQLGEMPLPPYITHKLED----RTRYNTVYAKEEGSAAAPTAGLHWTKELLEQCE 59
Query: 210 SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVG 269
+ G+++ +TLHVG GTF PVK+E+ + H MHSE + A+ + + K RGGR++ G
Sbjct: 60 AKGVEILRITLHVGLGTFRPVKMEEVEKHHMHSEYYSVSQEVAEKIEASKKRGGRVICTG 119
Query: 270 TTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCG 329
TTS R LE+A E G I SG+T+IFI PG+ F+ +D L++NFHLP+STLLMLVSA
Sbjct: 120 TTSCRALESAARESGKIEAKSGWTDIFIYPGFSFKVMDALITNFHLPESTLLMLVSALSS 179
Query: 330 IEETKKMYQHAISHAYRFYSYGDTSLL 356
E+ Y+ A+ YRF+S+GD +
Sbjct: 180 REKILHAYEEAVKEKYRFFSFGDAMFI 206
>gi|228470155|ref|ZP_04055064.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
gi|228308293|gb|EEK17148.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
Length = 425
Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats.
Identities = 122/417 (29%), Positives = 186/417 (44%), Gaps = 68/417 (16%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD RL++ + DH ++LP L + ++ N
Sbjct: 15 INDYDYPLPDERIAAHPLAERDQCRLLLSD----ATGRLEDHTFAELPKLLPPHALLIRN 70
Query: 63 NTKVITAQLNGVRFCH-------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NT+VI A++ V+ ++ + + SW SK + +
Sbjct: 71 NTRVIKARIFFVKATGARIEILCLDPYKPVSYEESLSSLGSCSWHCLVGNSKKWRPEQTI 130
Query: 116 --HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
GQ+ + + +S + L G +P+PPY+ R +
Sbjct: 131 SCTLPLAGGQTITLQANREADTPDVVTFSWSDETKSFGEILELCGQLPIPPYLN--RETE 188
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+ D DYQT YA+I+GSVAAPTAGLHFT L +L++ G ++ +TLHVGAGTF+PVK
Sbjct: 189 SSDLTDYQTVYARIEGSVAAPTAGLHFTPELDDQLLAEGHRITELTLHVGAGTFLPVKGR 248
Query: 234 DTDDHIMHSEIGFIDAPTAQ-----------------------------ALNSVKSRGGR 264
DH MHSE + T + AL + G
Sbjct: 249 QVADHQMHSEYCSVPTATLETLLEHIDSPFVPIGTTSVRTLESLYWFAVALQQAEQEGRD 308
Query: 265 IV---------------SVGTTSLRLLET------ATTEDGIINPWSGFTNIFITPGYRF 303
+ S G + E G+ + T + I PGY++
Sbjct: 309 VAEPFHLDQWYSYRMHQSCGASLPSRREALEILLRYVRHKGLDR-LTFSTALLIAPGYQY 367
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-HAYRFYSYGDTSLLFQK 359
+ VDIL++NFH PKSTLL+LVSA G + +Y+HA++ YRF SYGD LL+++
Sbjct: 368 QMVDILVTNFHQPKSTLLLLVSALIG-PHWRTLYEHALADAHYRFLSYGDACLLYRR 423
>gi|282877518|ref|ZP_06286336.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
gi|281300342|gb|EFA92693.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
Length = 432
Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats.
Identities = 123/437 (28%), Positives = 188/437 (43%), Gaps = 91/437 (20%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++ +DLP RIA P+ RD ++L++ + + + + L L ++F
Sbjct: 7 HISDYQYDLPDDRIAKFPIAQRDHSKLLLYN-----QGKVGEDVFYHLKDHLPQGALMIF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISC-------TLHMRVSPNSWSVYARPSKVIKKGDI 114
NNTKVI A++ ++ + + +W K K+G +
Sbjct: 62 NNTKVIQARMYFMKSTGARIEAFLMEPAAPTDYEQIFQTRGHCAWYCMIGNLKKWKEGSL 121
Query: 115 LHFFSQDG--------------QSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVG 158
+ G + + E + + F + + +G
Sbjct: 122 ARSYEIKGRSLTLTITRKSQQKEDQAEGNLQLSAPATHHWIEFDWDAEDISFSEILEDMG 181
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
+P+PPY+ R D YQT Y+KI+GSVAAPTAGLHFT+++L L GI V
Sbjct: 182 ELPIPPYLN--RETQESDKTTYQTVYSKIKGSVAAPTAGLHFTNDVLKSLDEHGIDREEV 239
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PVK ++ +DH MH+E + T + L ++VGTTS+R LE+
Sbjct: 240 TLHVGAGTFKPVKSQEIEDHDMHTEYICVHQQTLEKL---LRHDASAIAVGTTSVRTLES 296
Query: 279 AT----------------------------TEDGIINPWSG------------------- 291
EDG G
Sbjct: 297 LYYMGVYLSEHPDASEAELHVSQWAPYERMREDGTTEQLDGGLIDGITSMQAIQNVLDYL 356
Query: 292 ----------FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
T I I PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+
Sbjct: 357 KRNQLGALHSSTQIIIAPGYEYKIVKMLITNFHQPQSTLLLLVSAFV-HGDWRKIYDYAL 415
Query: 342 SHAYRFYSYGDTSLLFQ 358
+H +RF SYGD+SLL
Sbjct: 416 AHDFRFLSYGDSSLLIP 432
>gi|255027786|ref|ZP_05299772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-003]
Length = 225
Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats.
Identities = 111/229 (48%), Positives = 151/229 (65%), Gaps = 6/229 (2%)
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
T +++ G +L FS GI + +G +PLPPYI + YQT YAK
Sbjct: 1 TCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RYQTVYAKEN 55
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H MHSE +
Sbjct: 56 GSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLT 115
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRAVD 307
+A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+PGY F+AVD
Sbjct: 116 EESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAVD 175
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 176 ALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 224
>gi|282895700|ref|ZP_06303825.1| Queuosine biosynthesis protein [Raphidiopsis brookii D9]
gi|281199394|gb|EFA74259.1| Queuosine biosynthesis protein [Raphidiopsis brookii D9]
Length = 316
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 120/302 (39%), Positives = 162/302 (53%), Gaps = 18/302 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LPP IA PV PRD++RLMV++P DH+ DLP L D +V N
Sbjct: 10 LSGYDYELPPELIAQNPVVPRDNSRLMVINPPAGTLTPPLDHIFRDLPELLKPGDLLVMN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+VI A+L G + + L N W +P K G + F Q
Sbjct: 70 NTRVIPARLYGRKS-----TGARVEVLLLEEKQHNCWLALVKPGKYFNIGTEIIFDDQGL 124
Query: 123 QS------RLEATVIDK-WNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDA 174
S +L ATVI++ NTG LL F + + L + +G IPLPPYI ++
Sbjct: 125 SSVNKLIPQLTATVIERDENTGGRLLRFDLPINVSLLHFLHKLGKIPLPPYINNSHALE- 183
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YAK G+VAAPTAGLHFT LL +L GI+ F+TLHVG GTF PV+VED
Sbjct: 184 ---EQYQTVYAKHDGAVAAPTAGLHFTPELLVKLRESGIQQEFLTLHVGVGTFRPVEVED 240
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MH E + + + + K+ GGRI++VGTT +R LE A G + P++G N
Sbjct: 241 VTTHQMHEEWIEVSGDLVEKIYATKNAGGRIIAVGTTVVRALEGAAQS-GSLQPYTGKVN 299
Query: 295 IF 296
+F
Sbjct: 300 LF 301
>gi|288925762|ref|ZP_06419693.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccae D17]
gi|315608288|ref|ZP_07883278.1| possible queuine tRNA-ribosyltransferase [Prevotella buccae ATCC
33574]
gi|288337417|gb|EFC75772.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccae D17]
gi|315250069|gb|EFU30068.1| possible queuine tRNA-ribosyltransferase [Prevotella buccae ATCC
33574]
Length = 424
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 125/429 (29%), Positives = 188/429 (43%), Gaps = 83/429 (19%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +++++L RIA P+ PRD ++L++ + + + L L + +VF
Sbjct: 7 RISDYNYELLEERIAKFPIVPRDHSKLLLY-----KHGEVGEDVFYHLTDHLPNRALMVF 61
Query: 62 NNTKVITAQLNGVRFCHI-------NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A+++ + + SW K K+G +
Sbjct: 62 NNTRVIQARMHFRKETGALIEVFLMEPAMPTDYELMFQTSGHCSWLCMIGNLKKWKEGML 121
Query: 115 LHFFSQDG---------------QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVG 158
F G R + + T + + + + VG
Sbjct: 122 RRNFDIKGNRLTLTATMLRDEQLDDRQKNMTVHGGGTNYWVDFDWDNQQVSFAEILEAVG 181
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
+P+PPY+ R D YQT Y+KI+GSVAAPTAGLHFT ++L+ + GI V
Sbjct: 182 ELPIPPYLN--RATQESDKTTYQTVYSKIKGSVAAPTAGLHFTDDVLADVDRHGIVRDEV 239
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PVK + H MH+E + T + L G ++VGTTS+R LE+
Sbjct: 240 TLHVGAGTFKPVKSMEIAGHKMHAEYIVVHRHTFERLLEY---GCSAIAVGTTSVRTLES 296
Query: 279 -------------ATTEDGIINPWSGF--------------------------------- 292
A+ ED + W +
Sbjct: 297 LYYIGLYLEHHPEASEEDLHVGQWDPYDNGRNGKTVEGITPEQAIRNILSYLDRNGLEAL 356
Query: 293 ---TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
T I I PGY ++ V +L++NFH P+STLL+LVSAF + KK+Y +A+ H +RF S
Sbjct: 357 HSSTQIIIAPGYEYKIVKMLITNFHQPQSTLLLLVSAFLKGD-WKKVYDYALKHDFRFLS 415
Query: 350 YGDTSLLFQ 358
YGD+SLL
Sbjct: 416 YGDSSLLIP 424
>gi|149181032|ref|ZP_01859533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus sp. SG-1]
gi|148851316|gb|EDL65465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus sp. SG-1]
Length = 343
Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 103/357 (28%), Positives = 168/357 (47%), Gaps = 28/357 (7%)
Query: 8 FDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
F++P S A P R D RLMV++ I S LP F+ D +VFNN
Sbjct: 8 FEIPQSLNAKVPAEQRGAGRDDVRLMVMNGE-----EIHHERFSSLPDFMEEGDLLVFNN 62
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++ I A L G +E+ L ++ W + GD L + +
Sbjct: 63 SRTIPAVLKGK------ACNREMEIRLSRQLDDQRWEALIW-GGLFSAGDELELKNG-VK 114
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
+ + T +K + + FSI G++L I G YI +D YQT
Sbjct: 115 AVITGTGNEKP---LVTIDFSIGGVDLIDYIYSYGEPIRYEYIDSPWTLDV-----YQTA 166
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
YA + GSV +AG F+ + +L G++ F+TLH G + + + H E
Sbjct: 167 YASVPGSVEMASAGRAFSWRMFEKLKEKGVRTAFLTLHTGLSYYGNDRWPN---PQKHPE 223
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
I TA+ +N+V+ + GR+++VGTT +R LETA E G ++ G TN++I Y+
Sbjct: 224 AFHIPEETAKLINAVREKKGRVIAVGTTVVRALETAVDEKGYVSASKGITNLYIQKDYQL 283
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+A+D L++ H P++T L +++AF Y+ A+ Y ++ +GD +L+F +R
Sbjct: 284 KAIDGLVTGLHEPEATHLEMLAAFTYEHHLFDAYRQALKKGYLWHEFGDMNLIFAER 340
>gi|213609615|ref|ZP_03369441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 244
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 103/224 (45%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 136 TGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPT 195
G + V + ++ +G +PLPPYI RP + D YQT Y++ G+VAAPT
Sbjct: 13 HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELYQTVYSEKPGAVAAPT 70
Query: 196 AGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQAL 255
AGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIMHSE + A+
Sbjct: 71 AGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQEVVDAV 130
Query: 256 NSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFITPGYRFRAVDILMSNF 313
+ K+RG R+++VGTTS+R LE+A + +I P+ G T IFI PGY+++ +D L++NF
Sbjct: 131 LAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVIDALITNF 190
Query: 314 HLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
HLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 191 HLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 234
>gi|312132235|ref|YP_003999575.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
gi|311908781|gb|ADQ19222.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
Length = 394
Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 131/413 (31%), Positives = 180/413 (43%), Gaps = 74/413 (17%)
Query: 1 MMVK--EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
M + E+ + L +IA P PRD ++L+V IS + + FL
Sbjct: 1 MKIDIKEYTYPLIEEQIARFPHSPRDESKLLVY-----KDGQISHQIFKQIGDFLPDGAH 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-------------WSVYARP 105
+V N+TKVI A+L R + I L + P++ W
Sbjct: 56 LVLNDTKVIPARLYFTR-----QTGALIEIFLLNPLQPSTVLPIVMDETREVVWHCVIGN 110
Query: 106 SKVIKKGDIL--HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLP 163
K K ++L F + +L A K + + + + G IPLP
Sbjct: 111 KKKWKADEVLEGKFTLEGRSYKLWA----KQGEDNAVALTWEGDWAFSKVVEAYGNIPLP 166
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PY+ R D DYQT Y++ +G+VAAPTAGLHFT + L G+K FVTLHVG
Sbjct: 167 PYLK--RESQESDLTDYQTVYSEHEGAVAAPTAGLHFTDAVFQDLEGRGVKKSFVTLHVG 224
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-- 281
AGTFMPVK E+ +H MHSE + + + + I+ VGTTS+R LE+
Sbjct: 225 AGTFMPVKEENALNHPMHSEQIIVSRQFLNEILAQEDF---IIPVGTTSMRSLESMYWWG 281
Query: 282 ---EDGIINPWS---------------------------------GFTNIFITPGYRFRA 305
G P+S G T I I P Y FR
Sbjct: 282 VKLIKGEDQPFSIEKLYPYQDHPPITARESFEALLKEMGDEGQLVGNTEIMIFPSYTFRV 341
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
L++NFH P STLL+LV+A G E +K+Y A YRF S+GD+SLL
Sbjct: 342 CKGLITNFHQPTSTLLLLVAALVGEETWRKIYAEAGQQGYRFLSFGDSSLLLP 394
>gi|297564544|ref|YP_003683516.1| Queuosine biosynthesis protein [Meiothermus silvanus DSM 9946]
gi|296848993|gb|ADH62008.1| Queuosine biosynthesis protein [Meiothermus silvanus DSM 9946]
Length = 362
Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats.
Identities = 103/377 (27%), Positives = 164/377 (43%), Gaps = 34/377 (9%)
Query: 1 MMVKE--FDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M +KE DF LP A P RD RLMV + + + ++P L
Sbjct: 1 MTLKEPSLDFVLPAELEAREPPEARGLERDQVRLMVSYRSS---DRLVHTQFREIPQHLR 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP-----SKVI 109
+ D +V N + + A L R KE+ L R+ W+V R SK
Sbjct: 58 AGDVLVINTSGTLPAALPATRE-----DGKELRLHLSSRLPGGLWTVELRRVEEGASKPF 112
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLP-PY--- 165
+G G++ + K E + G L R + P P PY
Sbjct: 113 SEGQAGETLRLPGRASVRLLTRYKLQPSETQVPTPSQGKTLSRLWIATFSFPDPIPYLLE 172
Query: 166 ----IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
I + YQ+ Y GS P+AG FT+ +++RL++ G++V + LH
Sbjct: 173 HGQPIRYGYVPRSWPLEFYQSVYTTEMGSAEMPSAGRAFTAEIITRLVAQGVQVAPLLLH 232
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
G + + + E + TA+A+N ++ G R+++VGTT +R LET T
Sbjct: 233 TGVASLEDHEPP-------YEEFYRVPPETARAVNQARADGRRVIAVGTTVVRALETVTD 285
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
G+++P G+T + ITP RAVD +++ +H PK+T LM++ A G E Y+ A+
Sbjct: 286 VYGVVHPGEGWTQLVITPQRGVRAVDGILTGWHEPKATHLMMLEAIAGREPLAVAYRAAL 345
Query: 342 SHAYRFYSYGDTSLLFQ 358
Y ++ +GD L+
Sbjct: 346 ERRYLWHEFGDLHLILP 362
>gi|239994274|ref|ZP_04714798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii ATCC 27126]
Length = 227
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 96/225 (42%), Positives = 136/225 (60%), Gaps = 8/225 (3%)
Query: 140 LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLH 199
++ + + G +PLPPYI RP ++ D YQT Y + G+VAAPTAGLH
Sbjct: 4 FILQFDHDETVLTLLEAHGHMPLPPYI--DRPDESSDKERYQTVYNQKPGAVAAPTAGLH 61
Query: 200 FTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVK 259
F +L+ L G+ + FVTLHVGAGTF PV+V++ +H MH+E + A+ + K
Sbjct: 62 FDDAILAALKEKGVNLAFVTLHVGAGTFQPVRVDNIQEHKMHAEFAEVPQDVVDAVLTTK 121
Query: 260 SRGGRIVSVGTTSLRLLETATTEDGIIN------PWSGFTNIFITPGYRFRAVDILMSNF 313
+ G R+++VGTTS+R LE+A P++ T IFI PG+ F+ VD + +NF
Sbjct: 122 ANGKRVIAVGTTSVRSLESAAKASAERGDEEVIAPFNEDTEIFIYPGFEFKVVDAMFTNF 181
Query: 314 HLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
HLP+STL+ML+SAF G E K YQ AI YRF+SYGD+ + +
Sbjct: 182 HLPESTLMMLISAFAGKENVMKAYQEAIEKEYRFFSYGDSMFIER 226
>gi|293418471|ref|ZP_06660906.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
gi|291324999|gb|EFE64414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
Length = 286
Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats.
Identities = 109/301 (36%), Positives = 157/301 (52%), Gaps = 17/301 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E-----SINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 P 299
P
Sbjct: 286 P 286
>gi|114778172|ref|ZP_01453059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
gi|114551590|gb|EAU54144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
Length = 342
Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats.
Identities = 114/314 (36%), Positives = 164/314 (52%), Gaps = 24/314 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DFDLP IA +P+ RD++RL+ + ++D + DLP + D V
Sbjct: 1 MRVSDYDFDLPEKSIASQPLRQRDASRLLTL---SGEDGQLTDRWIRDLPQLVEPGDVWV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-NSWSVYARPSKVIKKGDILHFFS 119
N+T+VI A+L G + ++ L + W + + +K +K G ++ F +
Sbjct: 58 VNDTRVIPARLIGQKSS-----GGKVEVLLLEPSDKTDVWRAWGKSNKPLKAGTVITFTN 112
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
L D ++ + ++ I G +PLPPYI RP D
Sbjct: 113 TFSALVLSRDGKD--------ILVHLLADDVPAAIEAHGHMPLPPYIN--RPDSEEDKQR 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLH T+ L++ + G VTLHVG GTF PV+VE+ D+H+
Sbjct: 163 YQTVFARHAGAVAAPTAGLHLTTELMAAMEEAGAVFAHVTLHVGPGTFQPVQVENLDEHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + TA +N +S+G RIV+VGTTSLR LE A G + S T+IFITP
Sbjct: 223 MHEEGYIVPEETATLVNMARSQGRRIVAVGTTSLRTLEAAGAS-GELLAGSDRTSIFITP 281
Query: 300 GYRFR----AVDIL 309
GY F AVD L
Sbjct: 282 GYHFSYGRCAVDQL 295
>gi|42523695|ref|NP_969075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bdellovibrio bacteriovorus HD100]
gi|39575902|emb|CAE80068.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bdellovibrio bacteriovorus HD100]
Length = 346
Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats.
Identities = 125/358 (34%), Positives = 179/358 (50%), Gaps = 33/358 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + + DF P IA PV P +R+M V L + + DL + + + D +V
Sbjct: 1 MKLTDLDFSYPEELIATSPVRP---SRVMWVEGELEPQEI----SLQDLLSRIPAGDVLV 53
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ ++ ++ +++ W V PSK K G +L
Sbjct: 54 VNNTRVLKRRVFS----------GDVEILFLKQINATDWEVL-FPSKKFKIGSVLELPLG 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID---ARDY 177
++ T+ K + L +S ++ +PLPPYI + R D
Sbjct: 103 -----VQMTLQQKGRPQTVRLSQEVSEDYFQKVAE----LPLPPYIQKAREQRHTVDADE 153
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + K GS AAPTA LHF++ + L S G+KV VTLHVG GTF+PV ED +D
Sbjct: 154 SWYQTAWNKNPGSFAAPTASLHFSAEDIEGLKSRGVKVLEVTLHVGLGTFLPVTAEDLND 213
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE---DGIINPWSGFTN 294
H MH E I A T A+ K+ G +I S+GTT+ R LE+A +SGFT
Sbjct: 214 HDMHEEYVEISAATWSAVQKAKAEGRKIWSLGTTTSRSLESAAQGLLGAMSETGFSGFTK 273
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+ I PGY+++ VD LM+NFH P+STL+ LV+ F + K YQ AI +R +SYGD
Sbjct: 274 LLIQPGYQYKVVDCLMTNFHQPQSTLVALVAGFSSLNRVKACYQWAIERKFRLFSYGD 331
>gi|258615069|ref|ZP_05712839.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium DO]
Length = 216
Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 108/218 (49%), Positives = 141/218 (64%), Gaps = 6/218 (2%)
Query: 140 LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLH 199
++ F GI + +G +PLPPYI + YQT YAK GS AAPTAGLH
Sbjct: 3 IIDFEYEGI-FLEILESLGEMPLPPYIKERLED----PDRYQTVYAKENGSAAAPTAGLH 57
Query: 200 FTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVK 259
FT LL + + G+++ ++TLHVG GTF PV V+ ++H MHSE + A+ LN V+
Sbjct: 58 FTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHMHSEFYRLTEEAAERLNQVR 117
Query: 260 SRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
GG+IV+VGTTS+R LET T+ +G I SG+T+IFITPGY F+ V+ +NFHLPKS
Sbjct: 118 KNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITPGYEFKVVEAFSTNFHLPKS 177
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
TL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 178 TLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGDAMFV 215
>gi|108805409|ref|YP_645346.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rubrobacter xylanophilus DSM 9941]
gi|108766652|gb|ABG05534.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rubrobacter xylanophilus DSM 9941]
Length = 365
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 97/366 (26%), Positives = 155/366 (42%), Gaps = 36/366 (9%)
Query: 7 DFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
DF LPP A P RD+ RLMV P ++ DLP FL D +V N
Sbjct: 21 DFRLPPELEASEPPEARGLERDAVRLMVSRPGGG----VAHARFRDLPRFLEPGDLLVVN 76
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPS--------KVIKKGDI 114
+ + A L+ R + L R+ W+V R G++
Sbjct: 77 TSGTMKAALDARRE-----DGAPLELRLSTRLPAGLWTVELRRPAGGATEPFGGASAGEV 131
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPI 172
L G++ L A L + + L + G Y+
Sbjct: 132 LRLP-GSGRAALHARYRHAGGAESPRLWVATLDLPAPLGEYLERHGRPIRYGYVG----- 185
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ Y+T YA GS P+AG FT +++RL++ G++V + LH G + +
Sbjct: 186 EEWPIGYYRTAYATEDGSAEMPSAGRAFTPEVITRLVARGVQVAPLVLHTGVSSLESDEP 245
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+ E + TA+ N + GGR+V+VGTT +R LET + G+++P G+
Sbjct: 246 P-------YEEFYRVPPETARLANMAREAGGRVVAVGTTVVRALETVSDGRGVVHPGEGW 298
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T + +TP RAVD L++ H P+S+ L ++ A G E + Y A+ Y ++ +GD
Sbjct: 299 TGLVVTPERGVRAVDALVTGLHEPRSSHLAMLEAVAGREHLRLAYDEALKERYLWHEFGD 358
Query: 353 TSLLFQ 358
L+ +
Sbjct: 359 LHLILR 364
>gi|145240771|ref|XP_001393032.1| hypothetical protein ANI_1_2304074 [Aspergillus niger CBS 513.88]
gi|134077556|emb|CAK96700.1| unnamed protein product [Aspergillus niger]
Length = 356
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 104/369 (28%), Positives = 176/369 (47%), Gaps = 25/369 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M EF+FDL + PV RDS +++V+ S I + S + +
Sbjct: 1 MKTAEFEFDLDYKVMPHDPVELRGKTRDSGKMIVLDRESS---KIDHAIFSSIGEYFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +V N++ +++ L H N+ +++ H +P K+ L
Sbjct: 58 DLLVLNDSYMLSNTLWFE---HGNKDSLQLTVYGHEPDGTTIVE-LKKPEVTFKRAQTLT 113
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ +L+ T++D+ + F + EL L I
Sbjct: 114 SLD---EEKLKCTLLDQQPDKLWKVQF--TPTELLLPTLDQYGARLDENIHLNPTYWKEK 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK---VE 233
Y++ YAK GS+ P+AGLHF+ LL+ + + G+++ ++TLHVGA + V+ VE
Sbjct: 169 PDAYRSVYAKKPGSLEIPSAGLHFSHELLAEISAKGVEIAYITLHVGATEILSVRHISVE 228
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE---DGIINPWS 290
+ + H + SE + T+ LN +S G R+++VGTT +R LET T E G I P
Sbjct: 229 EIEKHKVRSEYYEVSERTSAQLNRARSEGRRVIAVGTTVMRTLETITRETGRKGTIKPQH 288
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA--YRFY 348
G+T+++I PG+ F AVD+L++N H P+S+ ++L +AF G + + Y+ I Y F
Sbjct: 289 GWTDLYIYPGFEFNAVDVLLTNLHRPRSSHIVLTAAFAGTDFVMRSYKE-IQEKGDYEFD 347
Query: 349 SYGDTSLLF 357
+GD L+
Sbjct: 348 MFGDCMLIT 356
>gi|310814918|ref|YP_003962882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
gi|308753653|gb|ADO41582.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
Length = 255
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 123/258 (47%), Positives = 173/258 (67%), Gaps = 6/258 (2%)
Query: 102 YARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIP 161
+P + + +G+ + F SRL AT+I + + + L F+++G + + ++ G +P
Sbjct: 3 LIKPLRKLHEGEDIVFT-----SRLSATLIGR-DGDQAKLRFNLTGDDFDAALAEAGQMP 56
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
LPPYIA +R DA+D DYQT +A G+VAAPTA LHF + +++ L + G+ + VTLH
Sbjct: 57 LPPYIAARRAADAQDLQDYQTIWADRPGAVAAPTASLHFDAAVMAALAARGVTLTRVTLH 116
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
VGAGTF+PVKV+D H MH+E G + A A + + K+ GGR++ VGTT+LRLLETA
Sbjct: 117 VGAGTFLPVKVDDIAQHKMHAEWGEVTATAAAEIAATKAAGGRVIPVGTTALRLLETAAR 176
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
+ G I PW G T+IFITPG+ FR D L++NFHLPKSTL+MLVS G + + +Y HAI
Sbjct: 177 DTGAIAPWVGETDIFITPGFNFRVADGLVTNFHLPKSTLMMLVSGLMGADRIRAIYDHAI 236
Query: 342 SHAYRFYSYGDTSLLFQK 359
+ YRF+SYGD SLL K
Sbjct: 237 AQRYRFFSYGDASLLLPK 254
>gi|115399122|ref|XP_001215150.1| predicted protein [Aspergillus terreus NIH2624]
gi|114192033|gb|EAU33733.1| predicted protein [Aspergillus terreus NIH2624]
Length = 375
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 96/369 (26%), Positives = 167/369 (45%), Gaps = 24/369 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M EF+FDL + P RDS R++V+ + I + S + +
Sbjct: 1 MKTAEFEFDLDSQIMPHDPAEVRGKSRDSGRMIVLDRS---AAKIEHSVFSSIVDYFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +V N++ +++ L + E + + +K G L
Sbjct: 58 DVLVLNDSYMLSNTLWFE-----HGNESVQVTVYGHEPDGTTIVDIRSDQQWVKSGLTLA 112
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ D L T++++ FS + L + G I
Sbjct: 113 AMNNDQ---LTCTLLEQQPDRLWKAKFSPPEL-LVPTLDQHGQRLD-ETIHLNPTTWKSM 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK---VE 233
Y++ YAK GS+ P+AGLHF+ LL+++ S G+++ ++TLHVGA + V+ E
Sbjct: 168 PEAYRSVYAKKAGSLEIPSAGLHFSDALLAQIQSKGVEIAYITLHVGATEVLSVRHISEE 227
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI---INPWS 290
+ ++H + SE + TA +N + G R+++VGTT +R LE+ G I P
Sbjct: 228 EIENHKVRSEYFEVADRTAAQINRARVEGRRVIAVGTTVMRTLESLALGKGRKAAIQPQD 287
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH-AISHAYRFYS 349
G+T+++I PG++F VD+L++N H P+S+ ++L +AF G + + Y A Y F
Sbjct: 288 GWTDLYIYPGFKFNVVDVLLTNLHRPRSSHIVLTAAFAGKDLVMRSYDEIAEHGGYEFDM 347
Query: 350 YGDTSLLFQ 358
+GD L +
Sbjct: 348 FGDYVYLIR 356
>gi|256394335|ref|YP_003115899.1| Queuosine biosynthesis protein [Catenulispora acidiphila DSM 44928]
gi|256360561|gb|ACU74058.1| Queuosine biosynthesis protein [Catenulispora acidiphila DSM 44928]
Length = 385
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 89/364 (24%), Positives = 164/364 (45%), Gaps = 31/364 (8%)
Query: 13 SRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVIT 68
+A +P RD RL+V + ++ ++ SDLP L D +V NN+ +
Sbjct: 36 DLLARKPAEARGLDRDGVRLLVARGRGADDPEVAHYVFSDLPDVLEPGDLLVVNNSGTLP 95
Query: 69 AQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEA 128
A L+ V R +S P++W V R A
Sbjct: 96 AALDAVDPDSGTRVVLHVST--GTPQDPDAWIVELRRPMADGSTRPFALGPDSQDPDSPA 153
Query: 129 TV-------------IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
T + + T + + G+ + ++ G Y+
Sbjct: 154 TPGLRLRVTGGATVTLLRPYTRRLWVARLDLGMSVADYLTRHGRAIRYDYV-----DRDW 208
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT +A I GS P+A F++++++RL++ G+ + +TLH G +
Sbjct: 209 PITAYQTVFAAIPGSAEMPSAARPFSTDVVARLVAKGVYIAPITLHTGVAS-------PE 261
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
++E + TA+ +N V++RGGR++++GTT++R LE+ E+G ++P G+T +
Sbjct: 262 AHEKPYAEWYSVPEATAELVNHVRARGGRVIAIGTTAVRALESVADEEGTVHPGQGWTEL 321
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
ITP RAVD L++ FH P+++ L++++A G + Y A++ Y ++ +GD +L
Sbjct: 322 IITPQRGVRAVDGLLTGFHEPEASHLLMLTAIAGPRLIRASYDAALAARYLWHEFGDVNL 381
Query: 356 LFQK 359
L ++
Sbjct: 382 LLRR 385
>gi|167567923|ref|ZP_02360839.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia oklahomensis EO147]
Length = 354
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 91/372 (24%), Positives = 167/372 (44%), Gaps = 33/372 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +FDF L + P RDS R++V+ I + + + L
Sbjct: 1 MKTDDFDFGLDWKAMPTDPAELRGKRRDSGRMIVLDR---AAATIEHTIFATISDRLRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN++ +++ L + ++ + + V R S+ + G L
Sbjct: 58 DLLVFNDSYMLSNTLPFR------HGNESAHVIVYGQEPDGTSIVELRSSQSPRPGLTLT 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT----IPLPPYIARKRPI 172
S+L T++ F +G + IPL P R RP
Sbjct: 112 ATD---DSQLSCTLLSPEPNQLWRARFEPAGKLVGVLDRRGWRSDETIPLNPVYWRTRPD 168
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK- 231
Y++ YA+ GS+ P+AGLHF++++L RL G++ ++TLHVGA + V+
Sbjct: 169 ------AYRSVYARKPGSLEIPSAGLHFSTDVLRRLADKGVEFAYITLHVGATEILAVRH 222
Query: 232 --VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED---GII 286
++ + H + E + A A +N ++ RI+++GTT++R LE+ +
Sbjct: 223 IDEDEVEQHKVRPEYFEVGAEAAGQINRARAERRRIIAIGTTAMRTLESLAAHGEPGAAL 282
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-HAY 345
+G+T ++I PG+ F+ + L++N H P+S+ ++L +AF G + + Y + Y
Sbjct: 283 RAQAGWTQLYIYPGFEFKIANGLLTNLHRPRSSHIVLTAAFAGKDLVMRGYAEILEMGGY 342
Query: 346 RFYSYGDTSLLF 357
F +GD+ L+
Sbjct: 343 EFDMFGDSMLIL 354
>gi|167573201|ref|ZP_02366075.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia oklahomensis C6786]
Length = 354
Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats.
Identities = 91/372 (24%), Positives = 167/372 (44%), Gaps = 33/372 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +FDF L + P RDS R++V+ I + + + L
Sbjct: 1 MKTDDFDFGLDWKAMPTDPAELRGKRRDSGRMIVLDR---AAATIEHTIFATISDRLRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN++ +++ L + ++ + + V R S+ + G L
Sbjct: 58 DLLVFNDSYMLSNTLPFR------HGNESAHVIVYGQEPDGTSIVELRSSQSPRPGLTLT 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT----IPLPPYIARKRPI 172
S+L T++ F +G + IPL P R RP
Sbjct: 112 ATD---DSQLSCTLLSPEPNQLWRARFEPAGKLVGVLDRRGWRSDETIPLNPVYWRTRPD 168
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK- 231
Y++ YA+ GS+ P+AGLHF++++L RL G++ ++TLHVGA + V+
Sbjct: 169 ------AYRSVYARKPGSLEIPSAGLHFSTDVLRRLADKGVEFAYITLHVGATEILAVRH 222
Query: 232 --VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED---GII 286
++ + H + E + A A +N ++ RI+++GTT++R LE+ +
Sbjct: 223 IDEDEVEQHKVRPEYFEVGAKAAGQINRARAERRRIIAIGTTAMRTLESLAAHGEPGAAL 282
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-HAY 345
+G+T ++I PG+ F+ + L++N H P+S+ ++L +AF G + + Y + Y
Sbjct: 283 RAQAGWTQLYIYPGFEFKIANGLLTNLHRPRSSHIVLTAAFAGKDLVMRGYAEILEMGGY 342
Query: 346 RFYSYGDTSLLF 357
F +GD+ L+
Sbjct: 343 EFDMFGDSMLIL 354
>gi|315048551|ref|XP_003173650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthroderma
gypseum CBS 118893]
gi|311341617|gb|EFR00820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthroderma
gypseum CBS 118893]
Length = 354
Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats.
Identities = 87/368 (23%), Positives = 161/368 (43%), Gaps = 27/368 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSAR----LMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +FDFD+ + PV R +R ++V+ ++ I + + +
Sbjct: 1 MKTVDFDFDVTARVMPDDPVELRGKSREDGKMIVLDRSVDA---IIHSGFASICEYFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREK-EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
D +V N++ V+ L V W A+ K
Sbjct: 58 DLLVLNDSYVLANVLWFKHGDETTHVGLCGHEPDNTTVVDMFGWPAAAKGLK-------- 109
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ +L T++++ F + + + I +
Sbjct: 110 --LTSKNNDKLTCTLLEQLPDQLWRAKFEPFDLVIPTLVEFGQRIDD--ITDPSVTLWRS 165
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK---V 232
+ Y++ YA GS P+AGLHF+ L++ +++ G++V ++TLHVGA V+
Sbjct: 166 TPLAYRSVYANKPGSFNVPSAGLHFSDRLMAEVVAKGVEVAYLTLHVGATETFAVRHISE 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI---INPW 289
E+ ++H + SE ++ TA +N + RI++VGTT +R LE+ + I
Sbjct: 226 EEIENHTVRSEYFEVEEKTAAQINRAITENRRIIAVGTTVMRTLESLAVKQEPKTPIKAQ 285
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH-AYRFY 348
SG+T+++I PG+ FR VD+L++N H P+S+ ++L +AF G + + Y + Y F
Sbjct: 286 SGWTDLYIFPGFTFRLVDVLLTNLHQPRSSHIVLTAAFAGKDLVMRSYAEILERGGYEFD 345
Query: 349 SYGDTSLL 356
+GD+ L+
Sbjct: 346 MFGDSMLI 353
>gi|298250612|ref|ZP_06974416.1| Queuosine biosynthesis protein [Ktedonobacter racemifer DSM 44963]
gi|297548616|gb|EFH82483.1| Queuosine biosynthesis protein [Ktedonobacter racemifer DSM 44963]
Length = 362
Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats.
Identities = 97/367 (26%), Positives = 154/367 (41%), Gaps = 30/367 (8%)
Query: 5 EFDFDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
DF LP A RP R D RLMV + I ++ FL D +V
Sbjct: 13 SLDFVLPAELEATRPPEARGLARDEVRLMVSYR---ANDHILHDRFREIEHFLEPGDLLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSK--------VIKKG 112
N + + A L+ R + L + N W V R + ++ G
Sbjct: 70 VNTSGTMNAALSATRA-----DGTPLEVHLSTHLPANLWIVEVRLKQGERTFPFSEMQAG 124
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQ-ISLVGTIPLPPYIARKRP 171
+ + L + I+ IEL + + P I
Sbjct: 125 ERVPLPGGASLHLLTPYSAGEGRLQPARQRLWIATIELASPLQEYLASYGFP--IRYNYV 182
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+A YQT YA GS P+AG FT L++RL++ GI++ + LH G +
Sbjct: 183 PEAWPLEYYQTVYATEYGSAEMPSAGRAFTPELIARLVARGIQIVPLLLHTGVSSLE--- 239
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+ + E + TA+++N+ + R+V+VGTT +R LET T DG+ +P G
Sbjct: 240 ----EHEPPYEEYYRVPVETAKSINTAHANHKRVVAVGTTVVRALETVTDVDGVTHPGEG 295
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+T + ITP RAV+ L++ H P+++ L+++ A G E +K Y A+ Y ++ +G
Sbjct: 296 WTRLVITPQRGLRAVNALLTGLHEPRASHLLMLEALAGREHLRKTYAAALQEQYLWHEFG 355
Query: 352 DTSLLFQ 358
D LL
Sbjct: 356 DLHLLLP 362
>gi|312198818|ref|YP_004018879.1| queuosine biosynthesis protein [Frankia sp. EuI1c]
gi|311230154|gb|ADP83009.1| Queuosine biosynthesis protein [Frankia sp. EuI1c]
Length = 368
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 94/356 (26%), Positives = 155/356 (43%), Gaps = 27/356 (7%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
FDLP A P RD RL+V P + SDL L D +V N + +
Sbjct: 35 FDLPAGLEAAAPPPSRDGVRLLVARPGD-----LRHARFSDLGDQLAPGDLVVVNTSGTL 89
Query: 68 TAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS--- 124
A + GVR + ++ + W V RP+ G + + +
Sbjct: 90 PAAVAGVRAG-----GETVAVHFATALDDGDWVVEVRPAGEAVTGPVADLRPGEQLALPA 144
Query: 125 RLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV G+ L + ++ + ++ VG Y+ D + Y+T
Sbjct: 145 GVRLTVRGPHPAGQRRLWRAYVPVDGGVVAYLAHVGRPIRYSYV-----PDPQPIEAYRT 199
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+ + GS P+AG F++ L++ L+S GI V V LH G + P +
Sbjct: 200 VFGRDPGSAEMPSAGRPFSTELVTDLVSRGIGVTPVLLHTGVSSQEPGEPPQ-------P 252
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + TA+ +N+ + GGR+V+VGTT R LE+A DG + P +G+T++ + P
Sbjct: 253 ERFRVGPQTARLVNATRRWGGRVVAVGTTVTRALESAAAPDGTVRPTAGWTDLVLGPDRP 312
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RAV L++ +H P ++ L L+ A G Y+ A+ Y ++ +GD+ LL
Sbjct: 313 ARAVTGLVTGWHAPGASHLDLLVAVAGPSLVADAYREAVRARYLWHEFGDSCLLLP 368
>gi|322707256|gb|EFY98835.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Metarhizium anisopliae ARSEF 23]
Length = 354
Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats.
Identities = 93/370 (25%), Positives = 162/370 (43%), Gaps = 31/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSAR----LMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +EFD+++ + PV R +R ++V+ + I+ + S + +
Sbjct: 1 MRTEEFDYNVDSRIVPDDPVELRGKSREDGKMVVLDRST---DKITHTVFSTICQYFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +V N++ V+ L P+ + L
Sbjct: 58 DLLVLNDSYVLANVLWFRYGDETTHVG-------LCGHEPDG-TTIVDVFGWPLAAPALT 109
Query: 117 FFSQDGQSRLEATVIDKWNTGEI---LLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
S++ RL T+++ L F + L V I P +
Sbjct: 110 LTSKN-NDRLTCTLLEALPDQLWRARLEPFDLVTPTLVEFGQRVDDITDPNLT-----LW 163
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK-- 231
+ Y++ YA GS P+AGLHF+ LL+ ++ G++V +TLHVGA V+
Sbjct: 164 RSAPLAYRSVYANTPGSFNIPSAGLHFSEALLAEAVAKGVEVAHITLHVGATETFAVRHI 223
Query: 232 -VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE---DGIIN 287
++ ++H + SE + A +N S G R+V+VGTT +R LET + I
Sbjct: 224 TEKEVENHKVRSEYFQVGDRAAAQINRAVSGGRRVVAVGTTVMRTLETLAAKLEPKAPIQ 283
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-HAYR 346
SG+T+++I PG+ F+ VD+L++N H P+S+ ++L +AF G E + Y + Y
Sbjct: 284 AQSGWTDLYIYPGFNFKLVDVLLTNLHQPRSSHIVLTAAFAGKELVMRSYAEILEGGGYE 343
Query: 347 FYSYGDTSLL 356
F +GD+ L+
Sbjct: 344 FDMFGDSMLI 353
>gi|327389602|gb|EGE87947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA04375]
Length = 316
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 95/279 (34%), Positives = 140/279 (50%), Gaps = 21/279 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI + +G +PLPPYI K Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGI-FLEVLESLGEMPLPPYIHEKLDD----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
HSE + A L R + + V ++ L +A
Sbjct: 225 HSEFYQLSEEAAATL-----RSVKKMVVVSSLSEPLLSA 258
>gi|323454146|gb|EGB10016.1| hypothetical protein AURANDRAFT_12238 [Aureococcus anophagefferens]
Length = 328
Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats.
Identities = 118/353 (33%), Positives = 166/353 (47%), Gaps = 31/353 (8%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
+ LP S IA P PR S+RL+V ++D L + L + ++ N+++V+
Sbjct: 1 YHLPQSSIAKYPASPRGSSRLLVA-----ADGELTDSRFEALTSHLPRDALVIVNDSRVV 55
Query: 68 TAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLE 127
A+L + L ++ ++ ++ R
Sbjct: 56 RARL------RCAGPDGAFEVLLLAPADADAD-----------PSPLVAARAEGQAWRAM 98
Query: 128 ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKI 187
D + L + GT P+PPY+ R D YQT YA
Sbjct: 99 LRRSDADGVEADVAFGGCGARTLASLLDAHGTTPVPPYLDRPDDDGDDDA--YQTAYAAD 156
Query: 188 QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFI 247
GSVAAPTAGLHFT + + + VTLHVGAGTF PV V +DH MH+E +
Sbjct: 157 AGSVAAPTAGLHFTDGHFAAVAAAFETHA-VTLHVGAGTFRPV-VGRVEDHAMHAERFAV 214
Query: 248 DAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG--YRFRA 305
+AL + G +V+VGTTS R LE+ T+ +S T++ ITP +RFRA
Sbjct: 215 SRACVEALAAAARDGRPVVAVGTTSARALESLATDA---TTFSASTSLCITPDGRWRFRA 271
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
VD L++NFH P STLL LV+AF G E K +Y HA++ YRF SYGD L +
Sbjct: 272 VDHLVTNFHHPDSTLLSLVAAFVGEEPAKDLYAHALAGGYRFLSYGDACYLSR 324
>gi|297624743|ref|YP_003706177.1| Queuosine biosynthesis protein [Truepera radiovictrix DSM 17093]
gi|297165923|gb|ADI15634.1| Queuosine biosynthesis protein [Truepera radiovictrix DSM 17093]
Length = 364
Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats.
Identities = 92/361 (25%), Positives = 145/361 (40%), Gaps = 20/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
+ + F+ P A P PRD+ RL+V S P ++L FL D
Sbjct: 5 LSDLTFERPEHLQATEPPEQRGVPRDAVRLLV-----STPEGHHGSCFANLANFLEPGDL 59
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V N + + A L +W R S L
Sbjct: 60 LVVNRSATLPASLPAEGGFGSFVLNLATRYGRGPNAE--TWLAEPRWSFAEPGPLPLALG 117
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT++ G L F ++ + +G Y+ A
Sbjct: 118 DVVTAGGLRATLV-HPYPGLPRLWFVRFDGDVGAAMQRLGAPIRYGYV-----ARAYPLA 171
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A GS P+A F+ +L L + G+ V +TLH G + V H
Sbjct: 172 TYQTLFADAPGSAEMPSAARPFSKRVLRCLAARGVGVARITLHTGVSSLE-VTEYKAARH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+ E + TA A+ K+ GGR+++VGTT +R LE+A DG + P GFT +++
Sbjct: 231 PLPPEPFEVPPETADAVRETKAAGGRVIAVGTTVVRALESAW--DGTMKPARGFTRLYLH 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG VD L++ FH PK++ L ++ A G + Y A+ Y ++ +GD+ L+
Sbjct: 289 PGRAVNVVDGLLTGFHDPKASHLAMLYAVAGQALVRGAYAEAVREGYLWHEFGDSHLILP 348
Query: 359 K 359
+
Sbjct: 349 R 349
>gi|15614774|ref|NP_243077.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus halodurans
C-125]
gi|10174830|dbj|BAB05930.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus halodurans
C-125]
Length = 336
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 92/356 (25%), Positives = 150/356 (42%), Gaps = 35/356 (9%)
Query: 8 FDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
F +P A P+ R R++V+ + + + +L D +V N
Sbjct: 7 FSIPDHLNASEPIERQGKQRSDVRMLVLDRDSHRTF---HEPFTAIANYLQQGDVLVLNR 63
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++ I ++L G + + I L W S + GD +
Sbjct: 64 SRTIPSRLIG------SLHGETIELRLSHERRDGLWDGLILSSSELHAGDRIFL-----S 112
Query: 124 SRLEATVIDK-WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
S L AT+I+K +T + FS G +L + G YI I DYQT
Sbjct: 113 SSLSATLIEKDEHTPLWRVAFSKRGAQLLEYVYRYGEPIGYEYIKSSLSIQ-----DYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+ GSV +AG FT LL+RL G+++ F+ LH G + D H
Sbjct: 168 VYSSAPGSVEMCSAGRPFTWQLLARLKQKGVRIAFLELHTGLSYYENDVWPDPAH---HP 224
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T + L +G RI++VGTT +R LET + G T + I GY
Sbjct: 225 EHYHIPKETIEELK----KGKRIIAVGTTVVRALETYAQTNRS----QGTTTLSIDAGYE 276
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ L++ FH P+++ L +++AF +E ++Y+ AI Y+++ +GD + +
Sbjct: 277 LQLATGLLTGFHEPQASHLHMLAAFVQEQELFRVYEQAIRQGYQWHEFGDVNFILP 332
>gi|213420137|ref|ZP_03353203.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 272
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 103/281 (36%), Positives = 148/281 (52%), Gaps = 15/281 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
HSE + A+ + K+RG R+++VGTTS+R LE+A
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQ 266
>gi|300783463|ref|YP_003763754.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Amycolatopsis mediterranei U32]
gi|299792977|gb|ADJ43352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Amycolatopsis mediterranei U32]
Length = 335
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 93/360 (25%), Positives = 152/360 (42%), Gaps = 37/360 (10%)
Query: 8 FDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
FDLP A P RD RL+V P + + L L D +V N
Sbjct: 5 FDLPAELSASAPPEARGLSRDEVRLLVA-----SPAGVHHTAFTGLGEHLRPGDLLVVNT 59
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVI----KKGDILHFFS 119
+ + A ++ R + + R+ SW V R + G+ L
Sbjct: 60 SGTLPAAVDARR------NGRPVVVHFATRLDDGSWVVELRAPDGPLLDGRPGERLALAG 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L G L + + IE+ ++ G Y+ A D
Sbjct: 114 DASLTLL-----APAVPGTARLWRATASIEVRALLAAAGRPIRYGYV-----PRAWPLSD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ GS P+A FT L++ L++ G+ + LH G + P E
Sbjct: 164 YQTVFAREPGSAEMPSAARPFTPELVTGLVTDGVLFAPLLLHTGVSS--PEAAE-----P 216
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
+E + TA ++ V+ RGGR+V+VGTT+ R LE+A G + G+T + + P
Sbjct: 217 PQAERYRVPPTTAALVSWVRERGGRVVAVGTTAARALESAA-SAGRVRAAEGWTELVLGP 275
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R VD +++ H P+++ L+L+ A G E +K Y+ A+ Y ++ +GD SLL ++
Sbjct: 276 DRPARVVDGIVTGLHAPEASHLLLLEAVAGAEVVQKAYEAAVEERYLWHEFGDVSLLLRR 335
>gi|116204341|ref|XP_001227981.1| hypothetical protein CHGG_10054 [Chaetomium globosum CBS 148.51]
gi|88176182|gb|EAQ83650.1| hypothetical protein CHGG_10054 [Chaetomium globosum CBS 148.51]
Length = 346
Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 87/357 (24%), Positives = 159/357 (44%), Gaps = 24/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSAR----LMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +EFDF+ P + PV R +R ++V+ + + S + F
Sbjct: 1 MRTEEFDFEWDPKAMPQDPVSLRGKSRESGKMLVLDRSTEASK---HTVFSTICDFFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVI-KKGDIL 115
D +V N++ +++ L ++ T++ N+ V P + G +
Sbjct: 58 DLLVLNDSYMLSNTLKFH------ANGTDVHVTVYGHEQDNTAIVSIEPDQPWIAPGATM 111
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ L +++ + L IEL + L +
Sbjct: 112 TSTD---EPALSCHLLEPQQGEDGLWRAQYEPIELLMPTLELYGHRLDETVPLNPGHWKN 168
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK---V 232
DY+ YAK GS+ P+AGLHF+ +L + + G+++ ++TLHVGA + ++
Sbjct: 169 SRKDYRAVYAKTPGSLEIPSAGLHFSKAILDQAVDKGVEIAYITLHVGATETLAIRHISE 228
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP---W 289
E+ ++H + SE + A ++ ++ G R+++VGTT +R LET P
Sbjct: 229 EEIENHKVRSEYFEVGETAAAQISKARAEGRRVIAVGTTVMRTLETLAQGKNKRAPLPAQ 288
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH-AISHAY 345
G+T ++I PG+ FRAVD+L++N H P+S+ ++L +AF G + + Y A Y
Sbjct: 289 KGWTGLYIYPGFDFRAVDVLLTNLHRPRSSHIVLTAAFAGKDFVMRCYDEIAERGDY 345
>gi|27462194|gb|AAO15370.1| tRNA ribosyltransferase [Helicobacter bizzozeronii]
Length = 308
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 106/335 (31%), Positives = 165/335 (49%), Gaps = 32/335 (9%)
Query: 28 LMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEIS 87
LMV ++ ++ F + +V N+TKVI A+L +++ +
Sbjct: 1 LMVYER---ASNKLTHSTFKEIFDFFPPHALVVLNDTKVIKARLFAH-----TAQKRPVE 52
Query: 88 CTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISG 147
LH SP + R ++ G +L + V++ + G +L F G
Sbjct: 53 ILLHHATSPTACLAQMR--GKVRPGLVLGL-----EGGYSCEVLEVLDNGLRVLSFKHGG 105
Query: 148 I-----ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTS 202
+ + L+G +PLPPY+ RP +A+D DYQ+ +AK G++AAPTA LHF+
Sbjct: 106 ELLEWAGVLEMLELLGHVPLPPYLK--RPDEAQDLQDYQSVFAKYPGAIAAPTASLHFSQ 163
Query: 203 NLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRG 262
+ L+ K F+TLHVGAGTF+ V+ ED +H MH+E L
Sbjct: 164 SAKDHLL-KNFKHVFITLHVGAGTFLSVQSEDIREHPMHAEFCRSLPQAGLTL----DEA 218
Query: 263 GRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLM 322
I+ VGTT+LR E G+ +F+ G + L++NFHLP+STL+M
Sbjct: 219 PYILCVGTTALRATEHYKRGFGLKP-----CELFLHLGNPVKHAQALLTNFHLPESTLIM 273
Query: 323 LVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
LV++ G+++ ++Y+ AI H YRFYSYGD L+
Sbjct: 274 LVASMVGLDKCLELYKIAIEHHYRFYSYGDGMLIL 308
>gi|322701657|gb|EFY93406.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Metarhizium acridum CQMa 102]
Length = 324
Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats.
Identities = 88/367 (23%), Positives = 155/367 (42%), Gaps = 55/367 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSAR----LMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +EFD+++ + PV R +R ++V+ + +I+ + S + +
Sbjct: 1 MRTEEFDYNVDSRFVPDDPVELRGKSRESGKMVVLDRSTG---MIAHTVFSTICQYFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +V N++ V+ L P+ + L
Sbjct: 58 DLLVLNDSYVLANVLWFRYGDESTHVG-------LCGHEPDG-TTIVDVFGWPLATPALT 109
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
S++ RL T+++ + P
Sbjct: 110 LTSKN-NDRLTCTLLEALP-------------------DQLWRARSAPLA---------- 139
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK---VE 233
Y++ YA GS P+AGLHF+ LL+ ++ G++V +TLHVGA V+
Sbjct: 140 ---YRSVYANTPGSFNIPSAGLHFSEALLAEAVAKGVEVAHITLHVGATETFAVRHITER 196
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED---GIINPWS 290
+ ++H + SE + A +N S G R+V+VGTT +R LET + I S
Sbjct: 197 EIENHKVRSEYFQVGDKAAAQINRAVSEGRRVVAVGTTVMRTLETLAAKQEPKAPIQAQS 256
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-HAYRFYS 349
G+T+++I PG+ F+ VD+L++N H P+S+ ++L +AF G E + Y + Y F
Sbjct: 257 GWTDLYIYPGFNFKLVDVLLTNLHQPRSSHIVLTAAFAGKELVMRSYAEILEGGGYEFDM 316
Query: 350 YGDTSLL 356
+GD+ L+
Sbjct: 317 FGDSMLI 323
>gi|297195176|ref|ZP_06912574.1| tRNA ribosyltransferase-isomerase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152670|gb|EDY66072.2| tRNA ribosyltransferase-isomerase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 415
Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 94/361 (26%), Positives = 164/361 (45%), Gaps = 37/361 (10%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P A P R D RL+V S +S H DLP L + D +V N +
Sbjct: 73 PEELSARVPAEERGSGRDDVRLLV-----SRGTEVSHHGFRDLPGRLRAGDVLVVNTSAT 127
Query: 67 ITAQLNGV-----RFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+ A ++G H + R + +R + S RP G ++
Sbjct: 128 LAAAVDGRLGGDAVVVHFSTRGDLGRWAVELRRPDGAGSTLPRPGG--PAGAVVR-VPGG 184
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ LEA ++ G L ++ + +++ + G Y R + YQ
Sbjct: 185 GELVLEAPLV----AGGERLWWARASVDVPTLLRRYGRPIRYRYTQR-----DQPLSAYQ 235
Query: 182 TTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
T +A GS P+A FT+ +++ L+S G++ + LH G + +
Sbjct: 236 TVFALPSPDGSGSAEMPSAARPFTAGVVADLVSRGVQFAPLVLHTGVASAEAHEPP---- 291
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+ E + A TA +N+ ++ GGRIV+VGTT++R LE+A +G++ P SG+T++ +
Sbjct: 292 ---YPERFEVPATTAWLVNAARAAGGRIVAVGTTAVRALESAADGEGVVRPVSGWTDLVV 348
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TP RAVD L++ H P+++ L++++A G + Y+ A+ H Y ++ +GD L+
Sbjct: 349 TPRRGVRAVDGLLTGLHEPEASHLLMLAAVAGRDALTCAYEEALRHRYLWHEFGDVHLIL 408
Query: 358 Q 358
Sbjct: 409 P 409
>gi|328471546|gb|EGF42428.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus MTCC 5462]
Length = 167
Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 84/167 (50%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPT 251
AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ + H MHSE +
Sbjct: 1 AAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVVEENIEAHKMHSEFYRLTPEA 60
Query: 252 AQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRFRAVDILM 310
A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PGY+++ VD +
Sbjct: 61 AATLNEVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPGYQWKVVDAFI 120
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 121 TNFHLPKSTLVMLVAAFTGRDTILNAYKHAIEEKYRFFSFGDAMFIY 167
>gi|289677976|ref|ZP_06498866.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae FF5]
Length = 179
Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats.
Identities = 86/163 (52%), Positives = 111/163 (68%), Gaps = 1/163 (0%)
Query: 196 AGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQAL 255
AG HF LL + + G++ FVTLHVGAGTF PV+VE +DH MHSE + A+
Sbjct: 2 AGRHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHMHSEWLEVGQDVVDAV 61
Query: 256 NSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHL 315
+ ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG F VD L++NFHL
Sbjct: 62 AACRARGGRVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPGRPFHVVDALVTNFHL 120
Query: 316 PKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
P+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 121 PESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 163
>gi|271962077|ref|YP_003336273.1| S-adenosylmethionine tRNA ribosyltransferase [Streptosporangium
roseum DSM 43021]
gi|270505252|gb|ACZ83530.1| S-adenosylmethionine tRNA ribosyltransferase [Streptosporangium
roseum DSM 43021]
Length = 371
Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats.
Identities = 95/374 (25%), Positives = 147/374 (39%), Gaps = 38/374 (10%)
Query: 8 FDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
F LP A P RD RL+V H I+ H ++LP L+ D +V NN
Sbjct: 13 FVLPHDLEAHEPPEARGLTRDGVRLLVSHGATG---EITHHGFAELPGLLHPGDLLVVNN 69
Query: 64 TKVITAQLNGVRFCHINRREKEISCTL-------------HMRVSPNSWSVYARPSKVIK 110
+ + A + R E+E L + RP
Sbjct: 70 SATLPAAVRLDRLAVHFSTEREDGTWLVELRRRMERRSGPGGGGAGQDARDRRRPGTAPA 129
Query: 111 KGDILHFFSQDGQSRLEATVI------DKWNTGEILLVFSISGIELERQISLVGTIPLPP 164
G + G + E + + L + E+ + G
Sbjct: 130 AGTEMASEPYPGGAAGEWLPLPGGATLRLLDRETPRLWRARLDREVPAYLRRYGVPIRYS 189
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R DYQT + GS P+AG FT+ L++ L+S GI V +TLH G
Sbjct: 190 YVER-----DWPLEDYQTVFGIRPGSAEMPSAGRPFTAELVTGLVSRGIGVAPITLHTGV 244
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
+ + E + TA+ + GGR+++VGTT +R LETA G
Sbjct: 245 TSPSTDEPPC-------PEWFEVSEATARQAELTRESGGRVIAVGTTVVRALETAALACG 297
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+ G+T+ +TP RAV+ L++ H P+S+ L ++SA G E + Y A+
Sbjct: 298 RVRAARGWTSHLVTPSAGVRAVNGLITGLHGPRSSHLPMLSAIAGGELLSRSYAEALGEG 357
Query: 345 YRFYSYGDTSLLFQ 358
Y ++ +GD L+ Q
Sbjct: 358 YLWHEFGDVHLILQ 371
>gi|159899299|ref|YP_001545546.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
gi|159892338|gb|ABX05418.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
Length = 349
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 89/361 (24%), Positives = 155/361 (42%), Gaps = 26/361 (7%)
Query: 7 DFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
DF+LP A P RD RLMV H S I + L L + D + N
Sbjct: 6 DFELPAVLEAGEPPEARGLERDQVRLMVSH---SRSNTIEHYRFDQLSMILQAGDVLAIN 62
Query: 63 NTKVITAQL-----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+ + A + +G RF + L P+ ++P + G+ L+
Sbjct: 63 TSGTLNAAIPATDASGQRFMVHLSTQLLAELWLVEVRLPH--GTSSQPYRAALAGNSLNL 120
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
S D + + L ++ Y+A
Sbjct: 121 PSGGQIDIHRGYANDGSAINRLWIASLRLPQPLPHYLAEHAKPIHYQYVAA-----DWPN 175
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA GS P+AG F+ LL+RL++ GI++ + LH G + +
Sbjct: 176 SYYQTVYATELGSAEMPSAGRAFSERLLTRLVAQGIQIAPLLLHTGVASLEDHEPP---- 231
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
++E + A +A +N ++ R+++VGTTS+R +E+ + G+++P +G+T + I
Sbjct: 232 ---YAEWYRVPATSADLINRARADHRRVIAVGTTSVRAIESTVDQRGLVHPQAGWTELVI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TP + +AVD +++ H PK+T L +++A G + + YQ A+ Y ++ +GD L+
Sbjct: 289 TPEHGLQAVDGILTGLHEPKATHLAMLAALAGYQHLELCYQAALEQHYLWHEFGDLHLIL 348
Query: 358 Q 358
Sbjct: 349 P 349
>gi|145631080|ref|ZP_01786855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
gi|144983365|gb|EDJ90847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
Length = 267
Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats.
Identities = 92/270 (34%), Positives = 137/270 (50%), Gaps = 11/270 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVG 269
MH+E + A+ + K G G
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKSGQTCNCSG 260
>gi|111017236|ref|YP_700208.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodococcus
jostii RHA1]
gi|110816766|gb|ABG92050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodococcus
jostii RHA1]
Length = 352
Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats.
Identities = 89/366 (24%), Positives = 155/366 (42%), Gaps = 35/366 (9%)
Query: 5 EFDFDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
EF F LP A P R DS R++V + DLP FL D +V
Sbjct: 11 EFRFVLPQRLEASGPPESRGLLRDSVRMLVSDRGR-----VEHSRFHDLPRFLRPGDVVV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSK-------VIKKGD 113
N + + A ++G + ++ W+V R I G
Sbjct: 66 VNASSTLAAAVDGTVDAV-----GPVVVHFSTDLADGDWAVEVRAPGPVSGALDTIAAGT 120
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + AT++ W G L + + L+ T P I +
Sbjct: 121 RIILPRG-----VVATLVKPWPLGSTRLWRASIDGVADVAAELLATSGRP--ITYAYVHE 173
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
YQT + + GS +A FT ++++ L + G+ V + LH G + P + E
Sbjct: 174 RWPLSSYQTIFGRTGGSAEMASAARPFTHSMVTDLATSGVVVAPILLHTGVSS--PERGE 231
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
E + TA+ +N ++ GGR+++VGTT R LETA T G+ +G+T
Sbjct: 232 PPI-----PERFEVPEQTARLVNDRRAAGGRVIAVGTTVTRALETAATSGGMAVAGAGWT 286
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++ ++ G VD L++ +H P ++ LML+ + G + ++ Y A++ Y ++ +GD+
Sbjct: 287 DLVLSAGRPTLVVDGLITGWHAPGASHLMLLESVVGEKAVRRAYDEALARGYLWHEFGDS 346
Query: 354 SLLFQK 359
+LL ++
Sbjct: 347 ALLLRR 352
>gi|167721138|ref|ZP_02404374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei DM98]
Length = 301
Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats.
Identities = 98/287 (34%), Positives = 143/287 (49%), Gaps = 17/287 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
SE + + + + ++RGGR+++VGTTS+R LE A +
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQHCMC 274
>gi|167895801|ref|ZP_02483203.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 7894]
Length = 267
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 98/280 (35%), Positives = 142/280 (50%), Gaps = 17/280 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
SE + + + + ++RGGR+++VGTTS+R LE A
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAAR 267
>gi|289809483|ref|ZP_06540112.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 195
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 155 SLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIK 214
+ +G +PLPPYI RP + D YQT Y++ G+VAAPTAGLHF LL+ L G++
Sbjct: 6 NAIGHMPLPPYI--DRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVE 63
Query: 215 VYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR 274
+ FVTLHVGAGTF PV+V+ +DHIMHSE + A+ + K+RG R+++VGTTS+R
Sbjct: 64 MAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVR 123
Query: 275 LLETAT--TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LE+A + +I P+ G T IFI PGY+++ +D L++NFHLP+STL+MLVSAF G +
Sbjct: 124 SLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQH 183
Query: 333 TKKMYQHAISHA 344
T Y+ A+
Sbjct: 184 TMNAYKTAVEQK 195
>gi|200389557|ref|ZP_03216168.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|199602002|gb|EDZ00548.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
Length = 359
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 87/369 (23%), Positives = 163/369 (44%), Gaps = 26/369 (7%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + ++E ++ ++ L + +
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVENHEALICYLASHGERLDEYVDSSLFYK----- 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPV 230
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + +
Sbjct: 168 --YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKI 225
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+ + ++ +H E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 226 QTKCVEEVTIHEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKAS 285
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F
Sbjct: 286 SGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDM 345
Query: 350 YGDTSLLFQ 358
+GD L+ Q
Sbjct: 346 FGDCMLIIQ 354
>gi|302524810|ref|ZP_07277152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. AA4]
gi|302433705|gb|EFL05521.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. AA4]
Length = 341
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 96/362 (26%), Positives = 165/362 (45%), Gaps = 38/362 (10%)
Query: 8 FDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
FDL R A P R D RL+ + P + + DL AFL D +V N
Sbjct: 8 FDLAEDRSASAPPEARGLARDEVRLL-----AAGPNGVQHAVFRDLAAFLQPGDLLVVNT 62
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVI----KKGDILHFFS 119
+ + A ++ VR H+ ++ + +W V R + G+ L+ +
Sbjct: 63 SGTLPAAVDAVRDDHV------VTVHFSTELDDGTWVVELRTPGGPLLDGRAGERLNLPA 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARDY 177
T+ + G L + +E L + ++ VG Y+ A
Sbjct: 117 GA-----VVTLCEPHVAGAQRLWRAKIEVEGKLPQYLAKVGRPIRYGYV-----PRAWPL 166
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQT +A GS P+A FT+ L+++L+S G+ + LH G + P E
Sbjct: 167 PNYQTVFALDPGSAEMPSAARPFTAELVTQLVSRGVLFAPILLHTGVSS--PEAGE---- 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+ E + A TA +N V+ +GGR+++VGTT++R +E+A G++ +G+T + +
Sbjct: 221 -PPYGERFRVPATTAALVNWVRDQGGRVIAVGTTAVRAIESAANPGGLVTAAAGWTELVL 279
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P RAVD L++ H P+++ L+L+ A G E ++ Y A+ Y ++ +GD SLL
Sbjct: 280 GPDRPARAVDGLITGLHAPEASHLLLLEAVVGAELVQRAYDAAVRREYLWHEFGDVSLLT 339
Query: 358 QK 359
+
Sbjct: 340 SR 341
>gi|167817319|ref|ZP_02448999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 91]
Length = 266
Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats.
Identities = 98/279 (35%), Positives = 142/279 (50%), Gaps = 17/279 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
SE + + + + ++RGGR+++VGTTS+R LE A
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAA 266
>gi|239940283|ref|ZP_04692220.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 15998]
gi|239986764|ref|ZP_04707428.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 11379]
gi|291443716|ref|ZP_06583106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 15998]
gi|291346663|gb|EFE73567.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 15998]
Length = 391
Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats.
Identities = 81/362 (22%), Positives = 144/362 (39%), Gaps = 37/362 (10%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P A P R D RL+V S ++ +LP L D +V N +
Sbjct: 39 PEELSARVPAEQRGAGRDDVRLLV-----SRGRSVAHQAFRELPEQLRGGDVLVVNTSMT 93
Query: 67 ITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPS-----KVIKKGDILHFFSQD 121
+ A +NG + + R + W+V R + G +
Sbjct: 94 LPAAVNGR------VGGERVVVHFSTRGADGRWAVEVRAPAGAGVTGPRPGGPAGAVVRL 147
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
R + L ++ + + G Y + Y+
Sbjct: 148 PGGRALVLEDPLGPSAGARLWWARVPEAVPELLRRYGRPIRYGYT-----DRDQPLSAYR 202
Query: 182 TTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
T +A GS P+A FT L++ L+ G+ + LH G + +
Sbjct: 203 TVFAVDSPDGGGSAEMPSAARPFTVPLVAELVRRGVLFAPLFLHTGVASAESHEPP---- 258
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGG-RIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+ E + A TA +N+V++ G R+++VGTT++R LE+A DG++ P G+T++
Sbjct: 259 ---YPERFAVPAATAWLVNAVRAAGSGRVIAVGTTAVRALESAAGADGVVRPAEGWTDLV 315
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+TP R VD L++ H P+++ L+++ A G E + Y+ A+ Y ++ +GD L+
Sbjct: 316 VTPRRGVRVVDGLLTGLHEPRASHLLMLEAVAGREALRHGYEAALQERYLWHEFGDVHLI 375
Query: 357 FQ 358
Sbjct: 376 LP 377
>gi|297198724|ref|ZP_06916121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sviceus ATCC 29083]
gi|197715395|gb|EDY59429.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sviceus ATCC 29083]
Length = 358
Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats.
Identities = 90/365 (24%), Positives = 154/365 (42%), Gaps = 43/365 (11%)
Query: 11 PPSRIALRPVFPR------DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A P R D+ RL+V S +S H +LP L + D +V N +
Sbjct: 8 PEELSARVPAEQRGPGLDRDAVRLLV-----SRSTEVSHHAFGELPRLLRAGDLLVVNTS 62
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP------SKVIKKGDILHFF 118
+ A ++G R + R W+V R ++ G
Sbjct: 63 PTLAAAVDGRI------RHARVVVHFSTRGDDGRWAVELRDPDGRGTTRARAGGPAGTEV 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL I + L + G E+ + G Y R +
Sbjct: 117 RLPGGGRL----ILEEAVSGRLWWARVCGGEVLGLLREHGRPIRYSYTER-----DQPLS 167
Query: 179 DYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT +A GS P+A FT+ L++ L+S G++ VTLH G + +
Sbjct: 168 VYQTVFALPSPDGAGSAEMPSAARPFTARLVAELVSRGVQFAPVTLHTGVASAEAHEPP- 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+ E + +A+ +N+ K+ GR+V+VGTT++R +E+A DG++ +G+T+
Sbjct: 227 ------YPERFSVPEASARLINAAKAGDGRVVAVGTTAVRAVESAAGADGVVRARAGWTD 280
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+ +TP R VD L++ H P+++ L+++ A G + Y+ A+ Y ++ +GD
Sbjct: 281 LVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRAAIDRGYEEALRRNYLWHEFGDVH 340
Query: 355 LLFQK 359
LL +
Sbjct: 341 LLLPQ 345
>gi|167549997|ref|ZP_02343755.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205325017|gb|EDZ12856.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 359
Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats.
Identities = 85/369 (23%), Positives = 163/369 (44%), Gaps = 26/369 (7%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + + S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKGEIHKVE---FSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + ++E ++ ++ L + +
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVENHEALICYLASHGERLDEYVDSSLFYK----- 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPV 230
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + +
Sbjct: 168 --YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKI 225
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 226 QTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKAS 285
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F
Sbjct: 286 SGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDM 345
Query: 350 YGDTSLLFQ 358
+GD L+ Q
Sbjct: 346 FGDCMLIIQ 354
>gi|167904189|ref|ZP_02491394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei NCTC 13177]
Length = 267
Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats.
Identities = 98/279 (35%), Positives = 141/279 (50%), Gaps = 17/279 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDNCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
SE + + + + ++RGGR+++VGTTS+R LE A
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAA 266
>gi|238911778|ref|ZP_04655615.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
Length = 359
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 87/368 (23%), Positives = 166/368 (45%), Gaps = 24/368 (6%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRRNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ + + +++ + L ++ G Y+
Sbjct: 113 FYLVD---NPEISIKIEQRFSGESQYRAVVENHEALICYLASHGERLD-EYVDSSLF--Y 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP---VK 231
+ Y++ ++K GS+ P+AG+HFT +L+ + G + F+TLHV + +P ++
Sbjct: 167 KYPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQTIKDKGGLISFITLHVASTEMLPNRKIQ 226
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWS 290
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + S
Sbjct: 227 TKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASS 286
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +
Sbjct: 287 GWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMF 346
Query: 351 GDTSLLFQ 358
GD L+ Q
Sbjct: 347 GDCMLIIQ 354
>gi|229814959|ref|ZP_04445297.1| hypothetical protein COLINT_02002 [Collinsella intestinalis DSM
13280]
gi|229809446|gb|EEP45210.1| hypothetical protein COLINT_02002 [Collinsella intestinalis DSM
13280]
Length = 298
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 46/301 (15%)
Query: 98 SWSVYARPSKVIKKGDILH------FFSQDGQSRLEATVID--KWNTGEILLVFSISGIE 149
W P K +K G+++ + L A ++D + G L+ F G
Sbjct: 1 MWECLVNPGKRLKPGNVVEYRAGGLLAPEGAPVVLTAEILDFIDDSKGGRLVRFEPVGEN 60
Query: 150 -------LERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFT 201
L+ I G +PLPPYI D YQT YA + S AAPTAGLHFT
Sbjct: 61 EGGVPRTLDEAIHAAGHVPLPPYITGY----EGDPEKYQTVYAMSEEHSAAAPTAGLHFT 116
Query: 202 SNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSR 261
L+ R+ G V L VG TF V+ +D +H+MH+E + A +A+++ K+
Sbjct: 117 PELIQRIKDKGCGWATVELEVGIDTFRLVEEDDPTEHVMHTERYHVPAEVVEAVHATKAA 176
Query: 262 GGRIVSVGTTSLRLLETAT------------------TEDGIINPWSGF--------TNI 295
G R+++VGTT++R LE+A EDG G TN+
Sbjct: 177 GHRVIAVGTTAVRSLESAWDAAAPASDPAVTARGFEGREDGADVRGEGDITVREDATTNL 236
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
++ PG F VD L++NFH+P+STL+MLVSA ++ Y+ A+ YRF+S+GD L
Sbjct: 237 YLMPGSTFHVVDALITNFHVPRSTLMMLVSALATRDQIIDAYEEAVREKYRFFSFGDAML 296
Query: 356 L 356
+
Sbjct: 297 I 297
>gi|168819315|ref|ZP_02831315.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|205343622|gb|EDZ30386.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
Length = 359
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 89/368 (24%), Positives = 165/368 (44%), Gaps = 24/368 (6%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ + V K++ + L ++ G Y+
Sbjct: 113 FYLVD---NPEISIKVEQKFSEESQYRAVVENHEALICYLASHGERLD-EYVDSSLF--Y 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVK 231
+ Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + ++
Sbjct: 167 KYPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQ 226
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWS 290
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + S
Sbjct: 227 TKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASS 286
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +
Sbjct: 287 GWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMF 346
Query: 351 GDTSLLFQ 358
GD L+ Q
Sbjct: 347 GDCMLIIQ 354
>gi|326780149|ref|ZP_08239414.1| Queuosine biosynthesis protein [Streptomyces cf. griseus XylebKG-1]
gi|326660482|gb|EGE45328.1| Queuosine biosynthesis protein [Streptomyces cf. griseus XylebKG-1]
Length = 440
Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/357 (22%), Positives = 147/357 (41%), Gaps = 21/357 (5%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P + A P R D RL+V S +S H +LP + + D +V N +
Sbjct: 82 PDALSARVPAEQRGSGRDDVRLLV-----SRGCAVSHHAFRELPGQVRAGDVLVVNTSMT 136
Query: 67 ITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKV-----IKKGDILHFFSQD 121
+ A +NG + + R + W+V R + G +
Sbjct: 137 LPAAVNGR------VGGERVVVHFSTRGADGRWAVELRAPGRAGATGPRPGGPAGAVVRL 190
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
R L ++ + + + G Y R +P+ A +
Sbjct: 191 PGGRALVLEEPLGPVAGARLWWARTPERVPELLRRYGRPIRYGYTERDQPLSA-YRTVFA 249
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T GS P+AG FT+ L++ L+ G+ ++LH G + + + +
Sbjct: 250 TPSPDGSGSAEMPSAGRPFTAALVAGLVRRGVLFAPLSLHTGVASAEAHEPPYPERFAVP 309
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+ ++ A ++ GGR+++VGTT++R LE+A DG++ G+T++ +TP
Sbjct: 310 AATAWLVNAVRAARGGDRAAGGRVIAVGTTAVRALESAAGADGVVRQAEGWTDLVVTPRR 369
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
R VD L++ H P+++ L+++ A G E + Y+ A+ Y ++ +GD L+
Sbjct: 370 GVRVVDGLLTGLHEPEASHLLMLEAVAGREALRLGYEAALQERYLWHEFGDVHLILP 426
>gi|168241078|ref|ZP_02666010.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|194450885|ref|YP_002045586.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|207856952|ref|YP_002243603.1| isomerase [Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|194409189|gb|ACF69408.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|205339445|gb|EDZ26209.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|206708755|emb|CAR33083.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
Length = 357
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 85/369 (23%), Positives = 163/369 (44%), Gaps = 26/369 (7%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + ++E ++ ++ L + +
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVENHEALICYLASHGERLDEYVDSSLFYK----- 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPV 230
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + +
Sbjct: 168 --YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKI 225
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 226 QTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKAS 285
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F
Sbjct: 286 SGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDM 345
Query: 350 YGDTSLLFQ 358
+GD L+ Q
Sbjct: 346 FGDCMLIIQ 354
>gi|204927616|ref|ZP_03218817.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204322958|gb|EDZ08154.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 357
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 89/368 (24%), Positives = 166/368 (45%), Gaps = 24/368 (6%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRRNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ G + + K++ + L ++ G Y+
Sbjct: 113 FYLVDNPG---ISIKIEQKFSEESQYRAVVENHEALICYLASHGERLD-EYVDSSLF--Y 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVK 231
+ Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + ++
Sbjct: 167 KYPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQ 226
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWS 290
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + S
Sbjct: 227 TKCVEEVTINEEYYEVSQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASS 286
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +
Sbjct: 287 GWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEHIQSCKFDMF 346
Query: 351 GDTSLLFQ 358
GD L+ Q
Sbjct: 347 GDCMLIIQ 354
>gi|284028027|ref|YP_003377958.1| Queuosine biosynthesis protein [Kribbella flavida DSM 17836]
gi|283807320|gb|ADB29159.1| Queuosine biosynthesis protein [Kribbella flavida DSM 17836]
Length = 344
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 84/359 (23%), Positives = 148/359 (41%), Gaps = 32/359 (8%)
Query: 8 FDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
F LP A+ P RD +L+V + ++ L L + D ++ N
Sbjct: 9 FTLPDELNAVEPPEARGLSRDQVKLLVAEGST-----VTHTRFDRLGEHLRAGDLLLVNT 63
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK----KGDILHFFS 119
+ + A + G + + +W V R + + GD +
Sbjct: 64 SGTLAAAVEGSWISSSGVTP--VVVHFSTELDDGTWVVELRSNGLPMLAGSTGDQVELP- 120
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+G +L A L E+ + G Y+
Sbjct: 121 -EGVLKLLAPYQA---GSTRLWRAQPPVAEVVDYLRRHGRPITYQYV-----DQQWPLAL 171
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A GS P+AG F+ L+S+L + G+ + + LH G + +
Sbjct: 172 YQTVFANQPGSAEMPSAGRPFSFELVSQLAAAGVLIAPILLHCGVSSLESHEPP------ 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
+E + TA+ +N VKS GGR+++VGTT++R +ETA G + SG+T++ ++P
Sbjct: 226 -LAERYAVPEHTARLVNWVKSTGGRVIAVGTTAVRAIETAALPSGSVVASSGWTDLVLSP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
VD L++ H P+++ L+L+ + G E + Y A+ Y ++ +GDT LL +
Sbjct: 285 ERPTAVVDGLITGMHAPEASHLLLLESVVGGEAVQHAYDAALDRGYLWHEFGDTCLLLR 343
>gi|226359753|ref|YP_002777531.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Rhodococcus opacus B4]
gi|226238238|dbj|BAH48586.1| putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Rhodococcus opacus B4]
Length = 352
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 90/368 (24%), Positives = 151/368 (41%), Gaps = 35/368 (9%)
Query: 3 VKEFDFDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
V EF F LP A P R DS +L+V + DLP FL S D
Sbjct: 9 VTEFRFVLPQRLEASGPPEERGLLRDSVKLLVSDRGN-----LVHSTFHDLPHFLRSGDV 63
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSK-------VIKK 111
+V N + + A ++G + + W++ R +
Sbjct: 64 VVVNASATLAAAVDGT-----VDTVGPVVVHFSTELEGGEWALEVRAPGLVSGALDSVGA 118
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
G + AT+ + W G L + + L+ T P I
Sbjct: 119 GVRIRLSRGA-----VATLHEPWPRGSTRLWRASIDGVADVAAELLATAGRP--ITYAYI 171
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D YQT + + GS +A FT +++ L + G+ + LH G + P +
Sbjct: 172 HDRWPLGYYQTIFGRTGGSAEMASAARPFTHPIVTELATSGVVTAPILLHTGVSS--PER 229
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
E E + TA+ +N ++ GGR+++VGTT R LET T DG+ G
Sbjct: 230 GEPPI-----PERYDVPEHTARLINDRRAEGGRVIAVGTTVTRALETRATPDGLAVAGGG 284
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+TN+ ++ R VD L++ +H P ++ LML+ + G ++ Y A++ Y ++ +G
Sbjct: 285 WTNLVLSARRPARVVDGLITGWHAPGASHLMLLESVVGAAAVRRAYDEALARGYLWHEFG 344
Query: 352 DTSLLFQK 359
D++LL ++
Sbjct: 345 DSALLLRR 352
>gi|197248887|ref|YP_002146493.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197212590|gb|ACH49987.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 359
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 89/368 (24%), Positives = 164/368 (44%), Gaps = 24/368 (6%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRRNRLIKVVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ V K++ + L ++ G Y+
Sbjct: 113 FSLVD---NPEISIKVEQKFSEESQYRAVVENHEALICYLASHGERLD-EYVDSSLF--Y 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVK 231
+ Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + ++
Sbjct: 167 KYPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQ 226
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWS 290
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + S
Sbjct: 227 TKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASS 286
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +
Sbjct: 287 GWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMF 346
Query: 351 GDTSLLFQ 358
GD L+ Q
Sbjct: 347 GDCMLIIQ 354
>gi|182439485|ref|YP_001827204.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|178468001|dbj|BAG22521.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseus subsp. griseus NBRC 13350]
Length = 440
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/357 (22%), Positives = 147/357 (41%), Gaps = 21/357 (5%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P + A P R D RL+V S +S H +LP + + D +V N +
Sbjct: 82 PDALSARVPAEQRGSGRDDVRLLV-----SRGCAVSHHAFRELPGQVRAGDVLVVNTSMT 136
Query: 67 ITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKV-----IKKGDILHFFSQD 121
+ A +NG + + R + W+V R + G +
Sbjct: 137 LPAAVNGR------VGGERVVVHFSTRGADGRWAVELRAPGRAGATGPRPGGPAGAVVRL 190
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
R L ++ + + + G Y R +P+ A +
Sbjct: 191 PGGRALVLEEPLGPVAGARLWWARTPERVPELLRRYGRPIRYGYTERDQPLSA-YRTVFA 249
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T GS P+AG FT+ L++ L+ G+ ++LH G + + + +
Sbjct: 250 TPSQDGSGSAEMPSAGRPFTAALVAGLVRRGVLFAPLSLHTGVASAEAHEPPYPERFAVP 309
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+ ++ A ++ GGR+++VGTT++R LE+A DG++ G+T++ +TP
Sbjct: 310 AATAWLVNAVRAARGGDRAAGGRVIAVGTTAVRALESAAGADGVVRQAEGWTDLVVTPRR 369
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
R VD L++ H P+++ L+++ A G E + Y+ A+ Y ++ +GD L+
Sbjct: 370 GVRVVDGLLTGLHEPEASHLLMLEAVAGREALRLGYEAALQERYLWHEFGDVHLILP 426
>gi|213864765|ref|ZP_03386884.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 358
Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats.
Identities = 85/369 (23%), Positives = 163/369 (44%), Gaps = 27/369 (7%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRRNRLIKIVLEGFLLNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + ++E ++ ++ L +
Sbjct: 113 FYLVDNPEISIKIEQRFGEESQYRAVVENHEALICYLASHGERLDEYVDSSLF------- 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPV 230
+ Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + +
Sbjct: 166 -YNPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKI 224
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 225 QTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKAS 284
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F
Sbjct: 285 SGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDM 344
Query: 350 YGDTSLLFQ 358
+GD L+ Q
Sbjct: 345 FGDCMLIIQ 353
>gi|16760321|ref|NP_455938.1| isomerase [Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|29141915|ref|NP_805257.1| isomerase [Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|213160920|ref|ZP_03346630.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213426452|ref|ZP_03359202.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213613345|ref|ZP_03371171.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213648021|ref|ZP_03378074.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|289826334|ref|ZP_06545446.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|25318249|pir||AG0674 probable isomerase STY1513 [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16502616|emb|CAD01768.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137544|gb|AAO69106.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
Length = 359
Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats.
Identities = 85/369 (23%), Positives = 163/369 (44%), Gaps = 26/369 (7%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRRNRLIKIVLEGFLLNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + ++E ++ ++ L + +
Sbjct: 113 FYLVDNPEISIKIEQRFGEESQYRAVVENHEALICYLASHGERLDEYVDSSLFYK----- 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPV 230
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + +
Sbjct: 168 --YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKI 225
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 226 QTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKAS 285
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F
Sbjct: 286 SGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDM 345
Query: 350 YGDTSLLFQ 358
+GD L+ Q
Sbjct: 346 FGDCMLIIQ 354
>gi|168235640|ref|ZP_02660698.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737330|ref|YP_002114566.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194712832|gb|ACF92053.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291067|gb|EDY30420.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 359
Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats.
Identities = 88/368 (23%), Positives = 166/368 (45%), Gaps = 24/368 (6%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ ++++F + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYNFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRRNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ G + + K++ + L ++ G Y+
Sbjct: 113 FYLVDNPG---ISIKIEQKFSEESQYRAVVENHEALICYLASHGERLD-EYVDSSLF--Y 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVK 231
+ Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + ++
Sbjct: 167 KYPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQ 226
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWS 290
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + S
Sbjct: 227 TKCVEEVTINEEYYEVSQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASS 286
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +
Sbjct: 287 GWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMF 346
Query: 351 GDTSLLFQ 358
GD L+ Q
Sbjct: 347 GDCMLIIQ 354
>gi|302561407|ref|ZP_07313749.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoflavus Tu4000]
gi|302479025|gb|EFL42118.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoflavus Tu4000]
Length = 347
Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats.
Identities = 84/363 (23%), Positives = 158/363 (43%), Gaps = 39/363 (10%)
Query: 11 PPSRIALRPVFPR------DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A PV R DS RL+V S +S H +LP L + D +V N +
Sbjct: 8 PEELSARVPVEQRGPGLDRDSVRLLV-----SRGTAVSHHAFMELPRLLRAGDLLVVNTS 62
Query: 65 KVITAQL-----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ A + +G H + R + + +R + AR G +
Sbjct: 63 PTLAAAVGGWIGHGRVVVHFSTRGDDGRWAVELRDPDGHGTTRARAGA--PAGTEVRLAG 120
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + + + L ++ + ++ + G Y R +
Sbjct: 121 G-----VRLVLEEPLSARGERLWWARASGDVRGALREYGRPIRYAYTER-----DQPLSA 170
Query: 180 YQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT +A GS P+AG FT+ +++ L+S G++ VTLH G +
Sbjct: 171 YQTVFALPSPDGAGSAEMPSAGRPFTARMVTELVSRGVQFAPVTLHCGVAS-------QE 223
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
++E + +A+ + +V++ GGR+++VGTT++R +E+A DG++ +G+T++
Sbjct: 224 AHEPPYAERFVVPEASARLIGAVRAGGGRVIAVGTTAVRAVESAAGADGVVRARAGWTDL 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+TP R VD L++ H P+++ L+++ A G + Y+ A+ Y ++ +GD L
Sbjct: 284 VVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRAAVGRGYEEALGGRYLWHEFGDVHL 343
Query: 356 LFQ 358
+
Sbjct: 344 VLP 346
>gi|167920403|ref|ZP_02507494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei BCC215]
Length = 273
Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats.
Identities = 97/276 (35%), Positives = 141/276 (51%), Gaps = 17/276 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
SE + + + + ++RGGR+++VGTTS+R LE
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRALE 263
>gi|289772478|ref|ZP_06531856.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces lividans TK24]
gi|289702677|gb|EFD70106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces lividans TK24]
Length = 359
Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 159/368 (43%), Gaps = 38/368 (10%)
Query: 11 PPSRIALRPVFPR------DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A P R D RL+V S +S H ++LP L + D +V N +
Sbjct: 10 PEELSARVPAEQRGPGLDRDDVRLLV-----SRGTEVSHHGFAELPGLLRAGDLLVVNTS 64
Query: 65 KVITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ A ++G H + R + + +R + AR +G +
Sbjct: 65 PTLAAAVDGRVGHARVVVHFSTRGDDDRWAVELREPDGRGATRARAEAEGVEGRGCGGLA 124
Query: 120 Q-----DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
G +RL GE L +SG E+ + G Y R
Sbjct: 125 GTKVRLPGGARLVLE-EPLSARGERLWWARVSGAEVPALLREHGRPIRYSYTER-----D 178
Query: 175 RDYVDYQTT----YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ YQT YA GS P+A FT+ L++ L+S G++ VTLH G +
Sbjct: 179 QPLSVYQTVFALPYADGTGSAEMPSAARPFTARLVAELVSRGVQFAPVTLHTGVASAESH 238
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+ + E + +A+ +N+V++ GR+V+VGTT++R +E+A DG++ +
Sbjct: 239 EPP-------YPERFAVPEASARLINAVRAGDGRVVAVGTTAVRAVESAAGADGVVRARA 291
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T++ +TP R VD L++ H P+++ L+++ A G + Y+ A+ Y ++ +
Sbjct: 292 GWTDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGQAAIDRGYEAAVRRRYLWHEF 351
Query: 351 GDTSLLFQ 358
GD LL
Sbjct: 352 GDVHLLLP 359
>gi|21220294|ref|NP_626073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces coelicolor A3(2)]
gi|256788586|ref|ZP_05527017.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces lividans TK24]
gi|12718424|emb|CAC28544.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces coelicolor A3(2)]
Length = 358
Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 159/368 (43%), Gaps = 38/368 (10%)
Query: 11 PPSRIALRPVFPR------DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A P R D RL+V S +S H ++LP L + D +V N +
Sbjct: 9 PEELSARVPAEQRGPGLDRDDVRLLV-----SRGTEVSHHGFAELPGLLRAGDLLVVNTS 63
Query: 65 KVITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ A ++G H + R + + +R + AR +G +
Sbjct: 64 PTLAAAVDGRVGHARVVVHFSTRGDDDRWAVELREPDGRGATRARAEAEGVEGRGCGGLA 123
Query: 120 Q-----DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
G +RL GE L +SG E+ + G Y R
Sbjct: 124 GTKVRLPGGARLVLE-EPLSARGERLWWARVSGAEVPALLREHGRPIRYSYTER-----D 177
Query: 175 RDYVDYQTT----YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ YQT YA GS P+A FT+ L++ L+S G++ VTLH G +
Sbjct: 178 QPLSVYQTVFALPYADGTGSAEMPSAARPFTARLVAELVSRGVQFAPVTLHTGVASAESH 237
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+ + E + +A+ +N+V++ GR+V+VGTT++R +E+A DG++ +
Sbjct: 238 EPP-------YPERFAVPEASARLINAVRAGDGRVVAVGTTAVRAVESAAGADGVVRARA 290
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T++ +TP R VD L++ H P+++ L+++ A G + Y+ A+ Y ++ +
Sbjct: 291 GWTDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGQAAIDRGYEAAVRRRYLWHEF 350
Query: 351 GDTSLLFQ 358
GD LL
Sbjct: 351 GDVHLLLP 358
>gi|168229939|ref|ZP_02654997.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194470161|ref|ZP_03076145.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194456525|gb|EDX45364.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205335353|gb|EDZ22117.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 357
Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats.
Identities = 85/369 (23%), Positives = 163/369 (44%), Gaps = 26/369 (7%)
Query: 1 MMVKEFDFDLPPSR-IALRP--VFP---RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDLYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ ++E ++ ++ L + +
Sbjct: 113 FSLIDNPEISIKIEQRFSEESQYRAVVENHEALICYLASHGERLDEYVDSSLFYK----- 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPV 230
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + +
Sbjct: 168 --YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKI 225
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 226 QTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKAS 285
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F
Sbjct: 286 SGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDM 345
Query: 350 YGDTSLLFQ 358
+GD L+ Q
Sbjct: 346 FGDCMLIIQ 354
>gi|87301163|ref|ZP_01084004.1| Queuosine biosynthesis protein [Synechococcus sp. WH 5701]
gi|87284131|gb|EAQ76084.1| Queuosine biosynthesis protein [Synechococcus sp. WH 5701]
Length = 316
Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats.
Identities = 104/315 (33%), Positives = 156/315 (49%), Gaps = 24/315 (7%)
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS------------PNSWSVYARPSKV 108
N+T+V+ A+L R + + + W RP K
Sbjct: 2 VNDTRVLKARLQARRAS-----GGAVELLVLQPYDSAAPREAAVASSDSCWICLVRPGKR 56
Query: 109 IKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPY 165
++ G++L + V +G ++ F I+ +E + G +PLPPY
Sbjct: 57 VRPGEVLQLEAAGQPPLPLEVVALDEASGGRVIRFPPGCIDASSIEALLQRYGAMPLPPY 116
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
I D YQT YA G+VAAPTAGLH + LL + + G+ + TLHVG G
Sbjct: 117 IQH---PDPEQESRYQTRYAARPGAVAAPTAGLHLSDELLEAIRARGVAIATATLHVGIG 173
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDG 284
TF P++ ED +HSE I ++ + + RGGR++++GTTS+R LE A G
Sbjct: 174 TFRPLEEEDLSSLDLHSEWVEISQELVDSVAACRRRGGRVIAIGTTSVRSLEGVAALHGG 233
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+ P+ G N+ I PG+RF+ V L++NFHLP+S+LL+LVSA G +Y+ A S
Sbjct: 234 SLVPFRGPVNLVIQPGFRFQLVQGLLTNFHLPRSSLLLLVSALIGRPRLLDLYEEAKSQG 293
Query: 345 YRFYSYGDTSLLFQK 359
YRF+SYGD + +
Sbjct: 294 YRFFSYGDAMWIAPE 308
>gi|322616167|gb|EFY13083.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322620892|gb|EFY17751.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322623017|gb|EFY19859.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322628307|gb|EFY25095.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322634712|gb|EFY31443.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322638721|gb|EFY35416.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322641114|gb|EFY37758.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322646522|gb|EFY43030.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322649113|gb|EFY45554.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322654510|gb|EFY50832.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322660771|gb|EFY57004.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322665127|gb|EFY61315.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322667871|gb|EFY64031.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322671717|gb|EFY67838.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322677237|gb|EFY73301.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322680100|gb|EFY76139.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322685471|gb|EFY81467.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|323193680|gb|EFZ78884.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323199987|gb|EFZ85075.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323204718|gb|EFZ89715.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323205716|gb|EFZ90679.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323214108|gb|EFZ98869.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323216779|gb|EGA01503.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323223044|gb|EGA07388.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323225192|gb|EGA09438.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323231905|gb|EGA16012.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323234432|gb|EGA18519.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323237883|gb|EGA21942.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323243516|gb|EGA27535.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323249513|gb|EGA33427.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323254242|gb|EGA38060.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323255068|gb|EGA38854.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323261270|gb|EGA44858.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323266635|gb|EGA50122.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
Length = 359
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 88/368 (23%), Positives = 164/368 (44%), Gaps = 24/368 (6%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRWNRLIKIVLEGFLPNNRVIISGLLKERLNAYDV 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ + V K++ + L ++ G Y+
Sbjct: 113 FYLVD---NPEISIKVEQKFSEESQYRAVVENHEALICYLASHGERLD-EYVDSSLF--Y 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVK 231
+ Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + ++
Sbjct: 167 KYPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQ 226
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWS 290
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + S
Sbjct: 227 TKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASS 286
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +
Sbjct: 287 GWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEHIQSCKFDMF 346
Query: 351 GDTSLLFQ 358
GD L+ Q
Sbjct: 347 GDCMLIIQ 354
>gi|167822431|ref|ZP_02453902.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 9]
Length = 262
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 96/275 (34%), Positives = 140/275 (50%), Gaps = 17/275 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
SE + + + + ++RGGR+++VGTTS+R L
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRAL 262
>gi|167912448|ref|ZP_02499539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 112]
Length = 262
Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats.
Identities = 96/275 (34%), Positives = 140/275 (50%), Gaps = 17/275 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
SE + + + + ++RGGR+++VGTTS+R L
Sbjct: 228 SESYELTDALVEKIAATRARGGRVIAVGTTSMRAL 262
>gi|39546320|ref|NP_460508.2| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167992895|ref|ZP_02573990.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205328936|gb|EDZ15700.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|267993455|gb|ACY88340.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301158076|emb|CBW17572.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912533|dbj|BAJ36507.1| putative S-adenosylmethionine:tRNA- ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|321224168|gb|EFX49231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|323129817|gb|ADX17247.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 4/74]
Length = 359
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 86/369 (23%), Positives = 163/369 (44%), Gaps = 26/369 (7%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + ++E ++ ++ L + +
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVENHEALICYLASHGERLDEYVDSSLFYK----- 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPV 230
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + +
Sbjct: 168 --YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKI 225
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 226 QTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKAS 285
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F
Sbjct: 286 SGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAYTSEHIQSCQFDM 345
Query: 350 YGDTSLLFQ 358
+GD L+ Q
Sbjct: 346 FGDCMLIIQ 354
>gi|168260278|ref|ZP_02682251.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|197262986|ref|ZP_03163060.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197241241|gb|EDY23861.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205351111|gb|EDZ37742.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
Length = 359
Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats.
Identities = 86/369 (23%), Positives = 163/369 (44%), Gaps = 26/369 (7%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + ++E ++ ++ L + +
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVENHEALIFYLASHGERLDEYVDSSLFYK----- 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPV 230
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + +
Sbjct: 168 --YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKI 225
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 226 QTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKAS 285
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F
Sbjct: 286 SGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAYTSEHIQSCQFDM 345
Query: 350 YGDTSLLFQ 358
+GD L+ Q
Sbjct: 346 FGDCMLIIQ 354
>gi|194442935|ref|YP_002040797.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194401598|gb|ACF61820.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 359
Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats.
Identities = 86/371 (23%), Positives = 162/371 (43%), Gaps = 30/371 (8%)
Query: 1 MMVKEFDFD--------LPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAF 52
M+ +++DF L P IA R+ +++V++ + I S L +
Sbjct: 1 MLTEKYDFRITDQMTILLRPHWIAND--SYREKCKMLVLNRSKG---EIHKVDFSKLTDY 55
Query: 53 LNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
+ D I FN++ +I F R+ + I L + N + + +
Sbjct: 56 IKEGDVICFNDSTIIN-----HMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNAN 110
Query: 113 DILHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
D+ + + ++E ++ ++ L + +
Sbjct: 111 DVFYLVDNPEISIKIEQRFSEESQYRAVVENHEALICYLASHGERLDEYVDSSLFYK--- 167
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---M 228
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV +
Sbjct: 168 ----YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNR 223
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIIN 287
++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 224 KIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLK 283
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F
Sbjct: 284 ASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAYTSEHIQSCQF 343
Query: 348 YSYGDTSLLFQ 358
+GD L+ Q
Sbjct: 344 DMFGDCMLIIQ 354
>gi|168463025|ref|ZP_02696956.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|195634554|gb|EDX52906.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
Length = 359
Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats.
Identities = 85/369 (23%), Positives = 162/369 (43%), Gaps = 26/369 (7%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRWNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + ++E ++ ++ L + +
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVENHEALICYLASHGERLDEYVDSSLFYK----- 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPV 230
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + +
Sbjct: 168 --YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKI 225
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 226 QTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKAS 285
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F
Sbjct: 286 SGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAYTSEHIQSCQFDM 345
Query: 350 YGDTSLLFQ 358
+GD L+ Q
Sbjct: 346 FGDCMLIIQ 354
>gi|326440409|ref|ZP_08215143.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces clavuligerus ATCC 27064]
Length = 364
Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 86/361 (23%), Positives = 149/361 (41%), Gaps = 37/361 (10%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P A P R D RL+V S +S + +LP L + D +V N ++
Sbjct: 14 PDELSAGVPAEVRGAGRDDVRLLV-----SRGERVSHRVFGELPGLLRAGDVLVVNTSRT 68
Query: 67 ITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+ A +NG H + R + + +R S R G ++ +
Sbjct: 69 LPAAVNGRVQGEPVVVHFSTRGDDGRWAVELRTPDGRGSSLPRAGG--PVGAVVRLPGGE 126
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ G L ++ + + G Y A + YQ
Sbjct: 127 -----RLVQEAPLSPGSGRLWWAWVSTPVPELLGRCGRPIRYGYTAG-----DQPLSAYQ 176
Query: 182 TTYAKIQ----GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
T +A+ GS P+A FT ++ L+ G++ V LH G + +
Sbjct: 177 TVFARRSPDGSGSAEMPSAARPFTERTVAALVRRGVQFAPVVLHTGVASAEAHEPP---- 232
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+ E + A +A +N+ ++ GGRI++VGTT++R LE+AT DG++ SG+T++ I
Sbjct: 233 ---YPERFAVPAASAWLVNAARAGGGRILAVGTTAVRALESATGADGVVREASGWTDLVI 289
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P RAVD L++ H P ++ L+++ A G + Y A+ Y ++ +GD L+
Sbjct: 290 GPKRGVRAVDGLLTGLHEPAASHLLMLEAIAGRPALSRAYDEALRGLYLWHEFGDVHLVL 349
Query: 358 Q 358
Sbjct: 350 P 350
>gi|254392740|ref|ZP_05007913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces clavuligerus ATCC 27064]
gi|294811852|ref|ZP_06770495.1| tRNA ribosyltransferase-isomerase [Streptomyces clavuligerus ATCC
27064]
gi|197706400|gb|EDY52212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces clavuligerus ATCC 27064]
gi|294324451|gb|EFG06094.1| tRNA ribosyltransferase-isomerase [Streptomyces clavuligerus ATCC
27064]
Length = 369
Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 86/361 (23%), Positives = 149/361 (41%), Gaps = 37/361 (10%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P A P R D RL+V S +S + +LP L + D +V N ++
Sbjct: 19 PDELSAGVPAEVRGAGRDDVRLLV-----SRGERVSHRVFGELPGLLRAGDVLVVNTSRT 73
Query: 67 ITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+ A +NG H + R + + +R S R G ++ +
Sbjct: 74 LPAAVNGRVQGEPVVVHFSTRGDDGRWAVELRTPDGRGSSLPRAGG--PVGAVVRLPGGE 131
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ G L ++ + + G Y A + YQ
Sbjct: 132 -----RLVQEAPLSPGSGRLWWAWVSTPVPELLGRCGRPIRYGYTAG-----DQPLSAYQ 181
Query: 182 TTYAKIQ----GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
T +A+ GS P+A FT ++ L+ G++ V LH G + +
Sbjct: 182 TVFARRSPDGSGSAEMPSAARPFTERTVAALVRRGVQFAPVVLHTGVASAEAHEPP---- 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+ E + A +A +N+ ++ GGRI++VGTT++R LE+AT DG++ SG+T++ I
Sbjct: 238 ---YPERFAVPAASAWLVNAARAGGGRILAVGTTAVRALESATGADGVVREASGWTDLVI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P RAVD L++ H P ++ L+++ A G + Y A+ Y ++ +GD L+
Sbjct: 295 GPKRGVRAVDGLLTGLHEPAASHLLMLEAIAGRPALSRAYDEALRGLYLWHEFGDVHLVL 354
Query: 358 Q 358
Sbjct: 355 P 355
>gi|56964908|ref|YP_176639.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus clausii KSM-K16]
gi|56911151|dbj|BAD65678.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus clausii KSM-K16]
Length = 332
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 98/348 (28%), Positives = 157/348 (45%), Gaps = 33/348 (9%)
Query: 16 ALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQL 71
A P R D RL+ + I S L L + D +VFNN++ I A+L
Sbjct: 11 ADTPPEKRGQMRDGVRLLTYWSDSG---RIVHGGFSQLAHQLEAGDVLVFNNSRTIPAEL 67
Query: 72 NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVI 131
+ I L V +W K + + E ++
Sbjct: 68 ---------KTVDGIRVRLSREVEDGTWDGLILGESSKKLEFMHGLKALVTGPGTEPPLV 118
Query: 132 DKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSV 191
LVFS S L R++ G + ++ + DYQT YA I GSV
Sbjct: 119 --------RLVFSCSSSRLLRELYRQGDVIRYEHV-----ARSWPLQDYQTVYASIPGSV 165
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPT 251
P+AG FT +L+ L GI++ FVTLH G + K + +H E I+
Sbjct: 166 EMPSAGRAFTWRMLAHLQKHGIRLAFVTLHAGLSYYGDDKWPN---PALHPEAFSIEDEQ 222
Query: 252 AQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMS 311
A +N K+ GGR+++VGTT +R LETA+ I P +G T+++++ + AVD L++
Sbjct: 223 AAIINDAKANGGRVIAVGTTVVRALETASD-GNTIIPQAGVTSLYLSRTSKLTAVDGLLT 281
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
FH +++ + L+ F G E K +Y+ A++ Y ++ +GD +LL ++
Sbjct: 282 GFHEQEASHIDLLQTFAGEEGVKAIYKEAVAKRYLWHEFGDMNLLMRQ 329
>gi|291301223|ref|YP_003512501.1| Queuosine biosynthesis protein [Stackebrandtia nassauensis DSM
44728]
gi|290570443|gb|ADD43408.1| Queuosine biosynthesis protein [Stackebrandtia nassauensis DSM
44728]
Length = 338
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 95/355 (26%), Positives = 151/355 (42%), Gaps = 29/355 (8%)
Query: 6 FDFDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
F F L + A RP R D RL+ + LP L D +V
Sbjct: 8 FGFALDAALEAGRPPEDRGSGRDDVRLLYTDKATGRTVS---DGFRRLPGLLRPGDLLVV 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N++ + A + R ++ L + + + S I G++L
Sbjct: 65 NDSATLPAAVWMRRLVVHFSTDRGDGTWLV-ELRKRVGGHHEQYSGGI-PGELLPLPGGA 122
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
RLEA + L + + + R + G Y+ YQ
Sbjct: 123 TL-RLEARHTGR-------LWIARMNVSVPRYLGKHGVPIRYSYV-----DRDWPLDRYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A GS P+A FT+ ++ RL G+ + +TLH G + P E +
Sbjct: 170 TVFATRPGSAEMPSAARPFTTAIVDRLRERGVTIAPITLHTGVAS--PEVDE-----TPY 222
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I A TA+A+N+ ++ GGR+++VGTT++R LETA DG++ SGFT +TP
Sbjct: 223 PERFRIGASTARAVNAARAAGGRVIAVGTTAVRALETAVDGDGVVKAASGFTEHIVTPAV 282
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
RAVD +++ H P+ST L ++SA + Y AI+ Y ++ +GD L+
Sbjct: 283 GVRAVDGILTGLHEPRSTHLSMLSAIVDNDVLASAYHKAIAERYLWHEFGDVHLI 337
>gi|330895867|gb|EGH28153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 161
Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats.
Identities = 79/146 (54%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
++ FVTLHVGAGTF PV+VE +DH MHSE + A+ + ++RGGR+++VGTTS
Sbjct: 1 METAFVTLHVGAGTFQPVRVEQIEDHHMHSEWLEVGQDVVDAVTACRARGGRVIAVGTTS 60
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LE+A DG + P+SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G E
Sbjct: 61 VRSLESAAR-DGELKPFSGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPE 119
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQ 358
T Y AI H YRF+SYGD + +
Sbjct: 120 TMAAYAAAIEHGYRFFSYGDAMFITR 145
>gi|16420070|gb|AAL20467.1| putative S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
Length = 346
Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats.
Identities = 79/341 (23%), Positives = 151/341 (44%), Gaps = 20/341 (5%)
Query: 23 RDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRR 82
R+ +++V++ + I S L ++ D I FN++ +I F R+
Sbjct: 16 REKCKMLVLNRSKG---EIHKVDFSKLTDYIKEGDVICFNDSTIIN-----HMFICKTRQ 67
Query: 83 EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS-QDGQSRLEATVIDKWNTGEILL 141
+ I L + N + + + D+ + + ++E ++ ++
Sbjct: 68 NRLIKIVLEGFLPNNRVIISGLLKERLNANDVFYLVDNPEISIKIEQRFSEESQYRAVVE 127
Query: 142 VFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFT 201
L + + Y++ ++K GS+ P+AG+HFT
Sbjct: 128 NHEALICYLASHGERLDEYVDSSLFYK-------YPDAYRSVFSKKYGSLEIPSAGIHFT 180
Query: 202 SNLLSRLISIGIKVYFVTLHVGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
+L+ R+ G + F+TLHV + ++ + ++ ++ E + TA +N+
Sbjct: 181 WDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTA 240
Query: 259 KSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPK 317
K GGRI +VGTT R LE+A + E + SG+T ++I PGY+ + VD L++N H PK
Sbjct: 241 KQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPK 300
Query: 318 STLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+T ++L F G++ K Y + +F +GD L+ Q
Sbjct: 301 TTHMVLTGQFAGVDLLIKAYTSEHIQSCQFDMFGDCMLIIQ 341
>gi|167837801|ref|ZP_02464684.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis MSMB43]
Length = 253
Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 92/267 (34%), Positives = 135/267 (50%), Gaps = 17/267 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVD-NTSAPPRLVDRRFAELPACVAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + P + R SK G L
Sbjct: 63 DTKVLKARFFGHKAS-----GGKIEVLIERVTGPRTALAQIRASKSPAPGTTLTLAD--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L + I G +PLPPYI DA D YQT
Sbjct: 115 --AFDVTVGERAEPFFTLHF----PDDCLALIERHGRLPLPPYIEHT--PDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVG 269
E + + + + ++RGGR+++VG
Sbjct: 227 ESYELTGALVEKIAATRARGGRVIAVG 253
>gi|161614013|ref|YP_001587978.1| hypothetical protein SPAB_01752 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161363377|gb|ABX67145.1| hypothetical protein SPAB_01752 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 326
Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 20/336 (5%)
Query: 28 LMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEIS 87
++V++ + I S L ++ D I FN++ +I F R+ + I
Sbjct: 1 MLVLNRSKG---EIHKVDFSKLTDYIKEGDVICFNDSTIIN-----HMFICKTRQNRLIK 52
Query: 88 CTLHMRVSPNSWSVYARPSKVIKKGDILHFFS-QDGQSRLEATVIDKWNTGEILLVFSIS 146
L + N + + + D+ + + ++E ++ ++
Sbjct: 53 IVLEGFLPNNRVIISGLLKERLNANDVFYLVDNPEISIKIEQRFSEESQYRAVVENHEAL 112
Query: 147 GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLS 206
L + + Y++ ++K GS+ P+AG+HFT +L+
Sbjct: 113 ICYLASHGERLDEYVDSSLFYK-------YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQ 165
Query: 207 RLISIGIKVYFVTLHVGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGG 263
R+ G + F+TLHV + ++ + ++ ++ E + TA +N+ K GG
Sbjct: 166 RIKDKGGLISFITLHVASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGG 225
Query: 264 RIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLM 322
RI +VGTT R LE+A + E + SG+T ++I PGY+ + VD L++N H PK+T ++
Sbjct: 226 RIFAVGTTVTRCLESAYSREYNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMV 285
Query: 323 LVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
L F G++ K Y + +F +GD L+ Q
Sbjct: 286 LTGQFAGVDLLMKAYASEDIQSCQFDMFGDCMLIIQ 321
>gi|290961493|ref|YP_003492675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces scabiei 87.22]
gi|260651019|emb|CBG74137.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces scabiei 87.22]
Length = 384
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 84/372 (22%), Positives = 149/372 (40%), Gaps = 38/372 (10%)
Query: 11 PPSRIALRPVFPR------DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A P R D RLMV S +S H+ ++LP L + D +V N +
Sbjct: 9 PEGLHARVPAEQRGPGLDRDGVRLMV-----SRGTEVSHHVFAELPRLLGAGDLLVVNTS 63
Query: 65 KVITAQLNG-----VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ A ++G H + R + + +R + R G +
Sbjct: 64 PTLAAAVDGTVGDARVVVHFSTRGDDGRWAVELRDPDGHGTTRVRAGG--PAGTRVRLPC 121
Query: 120 QDG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ + L A W L RPI
Sbjct: 122 EVRLVLEEPLSARGERLWWARVSLPSPEFPASPASSASPGPSEAVAEVLREHGRPIRYSY 181
Query: 177 YVD------YQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
YQT +A GS P+AG FT+ +++ L+S G++ VTLH G +
Sbjct: 182 TERDQPLSVYQTVFALPSQDGAGSAEMPSAGRPFTARMVAELVSRGVQFAPVTLHTGVAS 241
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
+ + E + +A+ +N+ ++ G R+++VGTT++R +E+A DG++
Sbjct: 242 AEAHEPP-------YPERFSVPEASARLVNAARAGGRRVIAVGTTAVRAVESAAGPDGVV 294
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
G+T++ +TP R VD L++ H P+++ L+++ A G + Y+ A+ Y
Sbjct: 295 RARDGWTDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRAAIDRSYEAAVEGRYL 354
Query: 347 FYSYGDTSLLFQ 358
++ +GD L+
Sbjct: 355 WHEFGDVHLVLP 366
>gi|239932119|ref|ZP_04689072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces ghanaensis ATCC 14672]
gi|291440489|ref|ZP_06579879.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces ghanaensis ATCC 14672]
gi|291343384|gb|EFE70340.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces ghanaensis ATCC 14672]
Length = 377
Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 82/374 (21%), Positives = 155/374 (41%), Gaps = 42/374 (11%)
Query: 11 PPSRIALRPVFPR------DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A PV R DS RL+V S +S H +LP L + D +V N +
Sbjct: 8 PEELSARVPVEQRGPGLDRDSVRLLV-----SRGTAVSHHAFVELPWLLRAGDLLVVNTS 62
Query: 65 KVITAQLNG-----VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ A ++G H + R + + +R + AR
Sbjct: 63 PTLAAAVDGWIGHTRVVVHFSTRGDDGRWAVELRDPDGRGTTRARGRGGEPGAPRGGGGG 122
Query: 120 QDGQ----------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+ + + L ++ ++ + G Y R
Sbjct: 123 GRAGGPAGTEVRLVGGARLVLEEPLSARGERLWWARVSRDVPGVLREHGRPIRYAYTER- 181
Query: 170 RPIDARDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ YQT +A + GS P+AG FT+ +++ L+S G++ V LH G
Sbjct: 182 ----DQPLSAYQTVFALPSPEGTGSAEMPSAGRPFTARMVAELVSRGVQFAPVVLHAGVA 237
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
+ + + E + +A+ + +V++ GGR+++VGTT++R +E+A DG+
Sbjct: 238 SAEAHEPP-------YPERFVVPEASARLVGAVRAGGGRVIAVGTTAVRAVESAAGADGV 290
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ +G+T++ +TP R VD L++ H P+++ L+++ A G + Y+ A+ Y
Sbjct: 291 VRARAGWTDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRAAVDRGYEEALHGRY 350
Query: 346 RFYSYGDTSLLFQK 359
++ +GD L+ +
Sbjct: 351 LWHEFGDVHLVLPE 364
>gi|330937012|gb|EGH41104.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 243
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 91/262 (34%), Positives = 131/262 (50%), Gaps = 19/262 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRG 262
HSE + A+ + ++RG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARG 243
>gi|29833016|ref|NP_827650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces avermitilis MA-4680]
gi|29610137|dbj|BAC74185.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces avermitilis MA-4680]
Length = 410
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 88/381 (23%), Positives = 159/381 (41%), Gaps = 54/381 (14%)
Query: 11 PPSRIALRPVFPR------DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A P R DS RL+V S +S H +LP L + D +V N +
Sbjct: 16 PEELSARVPAEQRGPGLDRDSVRLLV-----SRGTEVSHHDFVELPRQLRAGDLLVVNTS 70
Query: 65 KVITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ A ++G H + R ++ + +R + AR G +
Sbjct: 71 PTLAAAVDGRIGHARVVVHFSTRGEDGRWAVELRDPDGRGTTRARTGG--PAGTEVRLP- 127
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDARDYV 178
DG + + + S G ++ + G Y R +
Sbjct: 128 -DGVRLVLEEPLAGRSERLWWARVSAPGDADVTVLLRGHGRPIRYSYTER-----DQPLS 181
Query: 179 DYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT +A GS P+A FT+ L++ L+S G++ +TLH G + +
Sbjct: 182 VYQTVFALPSADGAGSAEMPSAARPFTARLVAELVSRGVQFAPITLHTGVASAEAHEPP- 240
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSR-----------------GGRIVSVGTTSLRLLE 277
+ E + +A+ +N+ ++ GGR+++VGTT++R +E
Sbjct: 241 ------YPERFAVPEASARLINAARAHRTPREASSSRGGDGSREGGRVIAVGTTAVRAVE 294
Query: 278 TATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
+AT DG++ P G+T++ +TP RAVD L++ H P+++ L+++ A G + Y
Sbjct: 295 SATGTDGVVRPAEGWTDLVVTPERGVRAVDGLLTGLHEPEASHLLMLEALAGRTAIDRSY 354
Query: 338 QHAISHAYRFYSYGDTSLLFQ 358
+ A++ Y ++ +GD L+
Sbjct: 355 EEALAGLYLWHEFGDLHLILP 375
>gi|302550473|ref|ZP_07302815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces viridochromogenes DSM 40736]
gi|302468091|gb|EFL31184.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces viridochromogenes DSM 40736]
Length = 347
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 87/364 (23%), Positives = 158/364 (43%), Gaps = 40/364 (10%)
Query: 11 PPSRIALRPVFPR------DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A PV R D+ R++V S ++ H ++LP L + D +V N +
Sbjct: 8 PEELSARVPVEQRGPGLDRDAVRMLV-----SRGTEVAHHTFTELPRVLRAWDLLVVNTS 62
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP------SKVIKKGDILHFF 118
+ A ++G + R W+V R ++ G
Sbjct: 63 ATLAAAVDGW------SGHTRVVVHFSTRGDDGRWAVELREPDGRGTTRPRAGGPAGTEV 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL + E L ++G + + G Y R +
Sbjct: 117 CLPGGVRLVLEEPLSGRS-ERLWWARVAGPGVVGLLREHGRPIRYAYTER-----DQPLS 170
Query: 179 DYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT +A GS P+A FT+ +++ L+S G+++ VTLH G + +
Sbjct: 171 VYQTIFALPSADGAGSAEMPSAARPFTARVVAELVSRGVRLAPVTLHTGVASAEAHEPP- 229
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+ E + +A+ +N+ K+ GGR+V+VGTT++R +E+A DG++ P +G+T
Sbjct: 230 ------YPERFAVPEASARLINATKAGGGRVVAVGTTAVRAVESAAGADGVVRPRAGWTG 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+ +TP R VD L++ H P+++ L+++ A G ++ Y+ A+ Y ++ +GD
Sbjct: 284 LVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRVAVERGYEAALQGRYLWHEFGDVH 343
Query: 355 LLFQ 358
L+ +
Sbjct: 344 LVLR 347
>gi|224533959|ref|ZP_03674544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
gi|224512962|gb|EEF83328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
Length = 232
Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 121/210 (57%), Gaps = 5/210 (2%)
Query: 152 RQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
+PLP YI R D D Y+T Y+K GS A+ TAGLHF+ +L S +
Sbjct: 23 DYFEKHCFVPLPSYIK--RDYDKIDEDRYRTIYSKYVGSAASATAGLHFSRDLFSVFENN 80
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
I+ F+TLHVG GTF+PV+ + ++H MH E I A L + K G RI+S+ TT
Sbjct: 81 NIEYDFITLHVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVRLQNAKLLGKRILSIVTT 140
Query: 272 SLRLLETATTED-GIINPWSGFTNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFC 328
+LR LE++ + TN+FI PG Y F+ VD+L +NFH P+STLLMLVS+F
Sbjct: 141 TLRALESSYNNNLKKFKTGQQSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFA 200
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G + Y+ AI+ Y+F+SYGD L+
Sbjct: 201 GKDFVFSFYEEAINKGYKFFSYGDAMLILN 230
>gi|329940706|ref|ZP_08289986.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoaurantiacus M045]
gi|329300000|gb|EGG43898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoaurantiacus M045]
Length = 415
Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 90/420 (21%), Positives = 164/420 (39%), Gaps = 89/420 (21%)
Query: 11 PPSRIALRPVFPR------DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A P R D+ RL+V S ++ H +LP L + D ++ N +
Sbjct: 13 PEELSARVPAERRGPGLGRDAVRLLV-----SRGTEVTHHAFPELPGLLRAGDLLLVNTS 67
Query: 65 KVITA----QLNGVRFC-HINRREKEISCTLHMRVSPNSWSVYAR--------------- 104
+ A +L R H + R ++ + +R + R
Sbjct: 68 PTLAAAADGRLGSDRVVVHFSTRGEDGRWAVELRAPDGRGTTRPRAGGPAGAVVELAEGV 127
Query: 105 -------------------------PSKVIKKGDILHFFSQDGQSR-------------- 125
++ G+ L DG +R
Sbjct: 128 RLVLEEPLAAGSERLWWARAVAPWARDGRVRGGNALGGGPHDGGARDGEATGADATGTDA 187
Query: 126 ---LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
A + +V ++ + G Y R + YQT
Sbjct: 188 RDGGTADAGTRDGGAAGRVVHPSGVADVPGLLRRHGRPIRYAYTER-----DQPLSAYQT 242
Query: 183 TYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+A GS P+A FT L++ L+S G++ +TLH G + +
Sbjct: 243 VFALPGADGAGSAEMPSAARPFTPRLVAELVSRGVQFAPLTLHTGVASAEAHEPP----- 297
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+ E + +A+ +N+ ++ GGR+V+VGTT++R +E+A DGI+ +G+T++ +T
Sbjct: 298 --YPERFAVPEASARLVNAARAGGGRVVAVGTTAVRAVESAAGADGIVRACAGWTDLVVT 355
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG R VD L++ H P+++ L+++ A G E ++ Y+ A++ Y ++ +GDT LL +
Sbjct: 356 PGRGVRVVDGLLTGLHEPEASHLLMLEAVAGREAVERGYEEALAGRYLWHEFGDTHLLLR 415
>gi|225549313|ref|ZP_03770286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
gi|225370171|gb|EEG99611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
Length = 232
Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 121/210 (57%), Gaps = 5/210 (2%)
Query: 152 RQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
+PLP YI R D D Y+T Y+K GS A+ TAGLHF+ +L S +
Sbjct: 23 DYFEKHCFVPLPSYIK--RDYDKIDEDRYRTIYSKYVGSAASATAGLHFSRDLFSVFENN 80
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
I+ F+TLHVG GTF+PV+ + ++H MH E I A L + K G RI+S+ TT
Sbjct: 81 NIEYDFITLHVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVRLQNAKLLGKRILSIVTT 140
Query: 272 SLRLLETATTED-GIINPWSGFTNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFC 328
+LR LE++ + TN+FI PG Y F+ VD+L +NFH P+STLLMLVS+F
Sbjct: 141 TLRALESSYNNNLKEFKTGQQSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFA 200
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G + Y+ AI+ Y+F+SYGD L+
Sbjct: 201 GKDFVFSFYEEAINKGYKFFSYGDAMLILN 230
>gi|331695034|ref|YP_004331273.1| Queuosine biosynthesis protein [Pseudonocardia dioxanivorans
CB1190]
gi|326949723|gb|AEA23420.1| Queuosine biosynthesis protein [Pseudonocardia dioxanivorans
CB1190]
Length = 355
Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats.
Identities = 101/372 (27%), Positives = 156/372 (41%), Gaps = 33/372 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M V F LP A P PRD RL+V + DL A L
Sbjct: 1 MTVS---FVLPDGLSATAPPESRGVPRDGVRLLVAR----AGRPVRHRRFRDLAASLAPG 53
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK-----K 111
D +V N + + A + G R + R + + + +P+ W V R +
Sbjct: 54 DLVVVNTSTTVPAAVAGTR---GDGRPVVLHVSGPVPGAPDRWVVELRTPGRERVHDGRP 110
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFS----ISGIELERQISLVGTIPLPPYIA 167
G+++ + + L A D T L G L + L G PY+
Sbjct: 111 GEVVTLPAG-AHAVLVAAHPDLGATTSRLWRAIVETGTPGRGLADWLELHGRPITYPYLG 169
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
PI+A V + + S P+AG FT +L RL + G+ V + LH G +
Sbjct: 170 TVPPIEAFRTVLARPV--RGFASAEMPSAGRPFTGAVLDRLAARGVGVAELVLHTGVSS- 226
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
P E E + A TA A+N ++ GGR+V+VGTT R LET EDG +
Sbjct: 227 -PEVGE-----PPLPERFRVPARTADAVNRTRAVGGRVVAVGTTVTRALETVADEDGTVR 280
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
SG+T++ + P R L++ +H P+++ L+L+ A G E Y A++ Y +
Sbjct: 281 AGSGWTDLVLGPHRPARVTTGLVTGWHEPQASHLLLLEAVAGRELVAAAYGAALAEGYLW 340
Query: 348 YSYGDTSLLFQK 359
+ +GD+ LL +
Sbjct: 341 HEFGDSCLLLPR 352
>gi|223889136|ref|ZP_03623725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 64b]
gi|223885385|gb|EEF56486.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 64b]
Length = 232
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 119/210 (56%), Gaps = 5/210 (2%)
Query: 152 RQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
+PLP YI R D D YQT Y+K GS A+ TAGLHF+ +L S +
Sbjct: 23 DYFEKHCFVPLPSYIK--RDYDKIDEDRYQTIYSKYVGSAASATAGLHFSRDLFSAFENN 80
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
I+ F+TLHVG GTF+PV+ + ++ MH E I A L + K G RI+ + TT
Sbjct: 81 NIEYDFITLHVGLGTFLPVRSKKVEERNMHFETFLIKDFVAVRLQNAKLLGKRILPIVTT 140
Query: 272 SLRLLETATTED-GIINPWSGFTNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFC 328
+LR LE++ + TN+FI PG Y F+ D+L +NFH+P+STLLMLVS+F
Sbjct: 141 TLRALESSYDNNLKKFKTGQQSTNLFIYPGKNYCFKFFDMLFTNFHIPQSTLLMLVSSFA 200
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G + Y+ A++ Y+F+SYGD L+
Sbjct: 201 GKDFVFSSYKEAVNKGYKFFSYGDAMLILN 230
>gi|221217423|ref|ZP_03588894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 72a]
gi|221192701|gb|EEE18917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 72a]
Length = 232
Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 120/210 (57%), Gaps = 5/210 (2%)
Query: 152 RQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
+PLP YI R D Y+T Y+K GS A+ TAGLHF+ +L S +
Sbjct: 23 DYFEKHCFVPLPSYIK--RDYYKIDEDRYRTIYSKYVGSAASATAGLHFSRDLFSVFENN 80
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
I+ F+TLHVG GTF+PV+ + ++H MH E I A L + K G RI+S+ TT
Sbjct: 81 NIEYDFITLHVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVRLQNAKLLGKRILSIVTT 140
Query: 272 SLRLLETATTED-GIINPWSGFTNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFC 328
+LR LE++ + TN+FI PG Y F+ VD+L +NFH P+STLLMLVS+F
Sbjct: 141 TLRALESSYNNNLKKFKTGQQSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFA 200
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G + Y+ AI+ Y+F+SYGD L+
Sbjct: 201 GKDFVFSFYEEAINKGYKFFSYGDAMLILN 230
>gi|237756796|ref|ZP_04585286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237691048|gb|EEP60166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 147
Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 70/150 (46%), Positives = 89/150 (59%), Gaps = 4/150 (2%)
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
++ G+ + ++TLHVG GTF PVK ED H MH E I T + + K +V
Sbjct: 1 KIKEKGVNIAYITLHVGLGTFKPVKTEDITKHKMHEEYFTIPKETLEMIKKTKENKKSVV 60
Query: 267 SVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSA 326
+VGTT +R LET G GFT+IFI P Y F+ VD L++NFHLPKSTLLMLVSA
Sbjct: 61 AVGTTVVRALETY----GKFGKTEGFTDIFIYPPYEFKIVDKLITNFHLPKSTLLMLVSA 116
Query: 327 FCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F + K Y A+ YRF+SYGD L+
Sbjct: 117 FADRDFILKAYNEAVKERYRFFSYGDAMLI 146
>gi|225549768|ref|ZP_03770733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
gi|225369728|gb|EEG99176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
Length = 232
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 121/210 (57%), Gaps = 5/210 (2%)
Query: 152 RQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
+PLP YI R D D Y+T Y+K GS A+ TAGLHF+ +L S +
Sbjct: 23 DYFEKHCFVPLPSYIK--RDYDKIDEDRYRTIYSKYVGSAASATAGLHFSRDLFSVFENN 80
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
I+ F+TL+VG GTF+PV+ + ++H MH E I A L + K G RI+S+ TT
Sbjct: 81 NIEYDFITLNVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVRLQNAKLLGKRILSIVTT 140
Query: 272 SLRLLETATTED-GIINPWSGFTNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFC 328
+LR LE++ + TN+FI PG Y F+ VD+L +NFH P+STLLMLVS+F
Sbjct: 141 TLRALESSYNNNLKKFKTGQQSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFA 200
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G + Y+ AI+ Y+F+SYGD L+
Sbjct: 201 GKDFVFSFYEEAINKGYKFFSYGDAMLILN 230
>gi|218133477|ref|ZP_03462281.1| hypothetical protein BACPEC_01343 [Bacteroides pectinophilus ATCC
43243]
gi|217990852|gb|EEC56858.1| hypothetical protein BACPEC_01343 [Bacteroides pectinophilus ATCC
43243]
Length = 200
Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 80/215 (37%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R ++RLM++ N I + D+ +LN D +V
Sbjct: 2 MELHDFYYDLPQELIAQDPLSDRSASRLMLLDKNTG---EIEHKIFKDIIDYLNPGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G R I L R + W V +P K K G + F
Sbjct: 59 INDTKVIPARLIGERVG----TGATIEVLLLKRKEDMKDVWEVLVKPGKKAKIGTKISF- 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL A VID G L+ F+ GI E + +G +PLPPYI K
Sbjct: 114 ---GDGRLVAEVIDIVEEGNRLIQFTYEGI-FEEILDELGQMPLPPYITHKLQD----KN 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
YQT YAK +GS AAPTAGLHFT LL R+
Sbjct: 166 RYQTVYAKHEGSAAAPTAGLHFTKELLERIQEKRC 200
>gi|213581763|ref|ZP_03363589.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 332
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 79/347 (22%), Positives = 153/347 (44%), Gaps = 26/347 (7%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRRNRLIKIVLEGFLLNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + ++E ++ ++ L + +
Sbjct: 113 FYLVDNPEISIKIEQRFGEESQYRAVVENHEALICYLASHGERLDEYVDSSLFYK----- 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPV 230
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + +
Sbjct: 168 --YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKI 225
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 226 QTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKAS 285
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K
Sbjct: 286 SGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKA 332
>gi|218133478|ref|ZP_03462282.1| hypothetical protein BACPEC_01344 [Bacteroides pectinophilus ATCC
43243]
gi|217990853|gb|EEC56859.1| hypothetical protein BACPEC_01344 [Bacteroides pectinophilus ATCC
43243]
Length = 118
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/117 (47%), Positives = 79/117 (67%)
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A +N+ K+ GGR++ VGTTS R +E+A+ +DG + SG+T IFI P
Sbjct: 1 MHSEYYVVTQEAADKINNAKADGGRVICVGTTSCRTIESASDDDGRVKACSGWTEIFIYP 60
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 61 GYKFKVLDALITNFHLPESTLLMLVSALAGREHILAAYKTAVEEKYRFFSFGDAMFI 117
>gi|167847215|ref|ZP_02472723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei B7210]
Length = 242
Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 85/254 (33%), Positives = 122/254 (48%), Gaps = 17/254 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIEHA--PDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHRMH 227
Query: 242 SEIGFIDAPTAQAL 255
SE + + +
Sbjct: 228 SESYELTDALVEKI 241
>gi|237755939|ref|ZP_04584528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237691888|gb|EEP60907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 190
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P PRDS RLMV+ I + D+ +L D +V
Sbjct: 1 MKLSDFDYHLPKELIAKYPAQPRDSCRLMVLDRKDKT---IEHRIFRDVIDYLKPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + + I L + N W + + +KK +
Sbjct: 58 LNNTKVIPARLIGKK----EKTNANIEVFLLRPIEDNIWEALIKNVRRLKKNQKIIISDD 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ + + + I +++ + G IPLPPYI R + +D Y
Sbjct: 114 --------FYVEFLSKDDEKAIVKIHSKDIKSDLEKYGHIPLPPYIE--REDEEKDKDYY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSR 207
QT +A+ +GSVA+PTAGLHFT LL +
Sbjct: 164 QTVFAEKEGSVASPTAGLHFTKELLEK 190
>gi|108761264|ref|YP_634449.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Myxococcus xanthus DK 1622]
gi|108465144|gb|ABF90329.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Myxococcus xanthus DK 1622]
Length = 364
Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 87/352 (24%), Positives = 138/352 (39%), Gaps = 26/352 (7%)
Query: 16 ALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVR 75
A P + RL+ V P D V+DLP+ L + D +V N+ + A L G
Sbjct: 27 ARWPADRPEEGRLLHVEPR---ARRYRDTRVADLPSLLRAGDLLVVNDAATLPASLVGR- 82
Query: 76 FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK-------KGDILHFFSQDGQSRLEA 128
+ I L R +W+ + + +L + L+A
Sbjct: 83 ----TESGERIELRLLSREPDGTWTGVLFGAGDWRRRTEDRPPPPVLAVGAGLVVGGLKA 138
Query: 129 TVIDKWNTGEILLV--FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK 186
V+ LL F +G L + G Y+ QT Y
Sbjct: 139 LVVAVLPPSPRLLRVAFDATGAALWSGLYRSGRPVQYAYLEA-----PLSLWHVQTAYGA 193
Query: 187 IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
SV AP+AGL T ++L L G+++ +T G + D + E
Sbjct: 194 RPWSVEAPSAGLPLTWSVLLTLRKQGVRLASLTHAAGLSSTG---DAALDAALPWPERSD 250
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRA 305
I A T +A+ ++ GGR+V+VGTT +R LE A G + T++ + PG+ R
Sbjct: 251 IPAATVEAVLHTRASGGRVVAVGTTVVRALEGRAARHGGWLVAGEEVTDLLLGPGFVPRL 310
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
V L + H P S L+ AF + +++ HA + Y + +GD+ LL
Sbjct: 311 VHGLFTGVHEPGSRHHALLQAFAPLPLLQEVAAHAEARGYLGHEFGDSCLLL 362
>gi|162453253|ref|YP_001615620.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
gi|161163835|emb|CAN95140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
Length = 341
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 84/356 (23%), Positives = 130/356 (36%), Gaps = 33/356 (9%)
Query: 16 ALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVR 75
A P RL+ V P + D ++DLPA L D +V N+ + A L+G
Sbjct: 4 ATWPRENPLEERLLHVDPRAG---RLRDARIADLPALLEPGDLLVVNDGATMPASLHG-- 58
Query: 76 FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK-------------KGDILHFFSQDG 122
R + L +S +S + GD + F
Sbjct: 59 ---ATERGAAVEVRLIGELSEGRYSALLFGAGDWHTRTEDRPAPPALGPGDAVTFGEDLS 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + + + F G L + G Y+A I QT
Sbjct: 116 A---TVERVSPASPRLVEIAFHERGAPLWSALYRRGRPIQYAYVAGPLEI-----WHAQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA P+AG LL LI G++V +T G + D +
Sbjct: 168 RYASRPLCAELPSAGRPLVWGLLLELIRRGVRVASLTHAAGISSTG---EPALDALLPLP 224
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGY 301
E I T A+ K+RG R+++VGTT R LE A G + +G T++ + PG+
Sbjct: 225 ERFDIPEETVAAVREAKARGRRVIAVGTTVTRALEGCAAQHGGELRAGAGVTDLMLHPGF 284
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R R VD L++ H P + L+ AF + +A Y + +GD+ L+
Sbjct: 285 RPRVVDGLLTGVHDPTESHFRLLEAFAPASLLHRANSYAEEAGYLCHEFGDSYLVL 340
>gi|34763571|ref|ZP_00144506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27886760|gb|EAA23898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 143
Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 63/136 (46%), Positives = 90/136 (66%)
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
VG GTF PV+ E+ +H MH E I A+ +N K+ G RI+SVGTT+ R LE++
Sbjct: 8 VGLGTFRPVQTENVLEHKMHEESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVD 67
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
++G + T+IFI PGY+F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+
Sbjct: 68 KNGKLIVQKKDTDIFIYPGYKFKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAV 127
Query: 342 SHAYRFYSYGDTSLLF 357
Y F+S+GD+ ++
Sbjct: 128 KEKYHFFSFGDSMFIY 143
>gi|284989128|ref|YP_003407682.1| Queuosine biosynthesis protein [Geodermatophilus obscurus DSM
43160]
gi|284062373|gb|ADB73311.1| Queuosine biosynthesis protein [Geodermatophilus obscurus DSM
43160]
Length = 339
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 88/353 (24%), Positives = 146/353 (41%), Gaps = 33/353 (9%)
Query: 16 ALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQL 71
A P R D RLM V P + ++ DLP L D +V N + + A+L
Sbjct: 10 ASAPPERRGLARDGVRLMAVRPGGT-----TETTFRDLPELLEPGDLVVVNTSATLPARL 64
Query: 72 NGVRFCHINRREKEISCTLHMRVSPNSWSVYAR------PSKVIKKGDILHFFSQDGQSR 125
+ R + + + W V R P + ++ G +L R
Sbjct: 65 DARRADGVRA-----PLHVSTALDDGDWVVELRRPDNDGPDRGVEPGTVLDLP-----GR 114
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ +++ + + + + ++ + P I A + Q YA
Sbjct: 115 VRLRLLEGFPAPARASRLWRARPDPDVAVAELLRRHGTP-IRYGHLSAAVPLAEAQNVYA 173
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
GS +AG FT +L RL++ G+ V V LH G + E
Sbjct: 174 TEPGSAENASAGRPFTDRVLVRLMARGVPVVPVVLHAGVSS-------PELHEPPMPERY 226
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
+ TA+ +N+ ++ G R+V+VGTT R LETAT EDG+ +G+T++ + P RA
Sbjct: 227 RVPEVTARLVNATRAAGSRVVAVGTTVTRALETATGEDGVTRAAAGWTDLVLGPDRPARA 286
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V L++ H P ++ L+L+ A G E + Y A + Y ++ +GDT L
Sbjct: 287 VSGLLTGLHAPDASHLLLLEAVAGRELVDEAYARAAAGGYLWHEFGDTMLFLP 339
>gi|295093022|emb|CBK82113.1| hypothetical protein [Coprococcus sp. ART55/1]
Length = 118
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 58/117 (49%), Positives = 81/117 (69%)
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE I+ A +N K+ GGR+VSVGTTS R LE+ + +DG ++ S +T+IFI P
Sbjct: 1 MHSEFCIIEQDAADMINETKAAGGRVVSVGTTSTRTLESMSDDDGTVHAGSKWTDIFIYP 60
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ +D L++NFHLP+STLLMLVSA E + Y+ A+ YRF+S+GD L+
Sbjct: 61 GYKFKVIDALITNFHLPESTLLMLVSALYDREHILEAYKVAVEEKYRFFSFGDAMLI 117
>gi|167860510|gb|ACA05032.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Flammeovirga yaeyamensis]
Length = 255
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 95/261 (36%), Positives = 135/261 (51%), Gaps = 51/261 (19%)
Query: 143 FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTS 202
+ + IS G PLPPYI R D YQT Y+K +G+VAAPTAGLHFT+
Sbjct: 2 WEEESLNFVDIISAAGNTPLPPYIK--RTATEDDKETYQTVYSKNEGAVAAPTAGLHFTN 59
Query: 203 NLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRG 262
+L L + G+ VTLHV AGTF P+ + DH MH+E I +AL
Sbjct: 60 EVLDVLKNQGVDEQEVTLHVSAGTFKPITADKVTDHDMHNEQIIITKENVKALIEAN--- 116
Query: 263 GRIVSVGTTSLRLLETAT------------------------------------------ 280
++ VGTTS+R LE++
Sbjct: 117 -KVACVGTTSMRTLESSYWYGVRLLLDNNSTFDIQKLEAYERMESGVTLPSRQESFGAIL 175
Query: 281 --TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
E+ ++ G T+IFI PGY+F+ +D L++NFHLP +TL++L++AF G + +K+YQ
Sbjct: 176 KHMEEHNLDTIHGETSIFIMPGYQFQVIDTLVTNFHLPSTTLVLLIAAFIGED-WRKVYQ 234
Query: 339 HAISHAYRFYSYGDTSLLFQK 359
A+ + YRF SYGD+S+LF+K
Sbjct: 235 AALDNDYRFLSYGDSSILFRK 255
>gi|295093023|emb|CBK82114.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Coprococcus sp. ART55/1]
Length = 209
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 67/221 (30%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R +RLMV+ I D+ +LN D +V
Sbjct: 1 MKLTDFYYDLPQELIAQDPLLKRSESRLMVLDRK---DNTIEHKHFYDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ I L R +W +P K K G + F S+
Sbjct: 58 INDTRVLPARLMGVK----EDTGASIEVLLLKRKDDCTWETLVKPGKKCKVGARIVFGSE 113
Query: 121 DGQ---------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
+ +L V+D G L+ F GI E + +G +PLPPYI K
Sbjct: 114 SNEPDPETGLIKGKLVGEVVDIVEEGNRLIRFEFDGI-FEEILDELGQMPLPPYITHKLE 172
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
YQT YA+ GS AAPT + LSR
Sbjct: 173 D----KNRYQTVYAEHDGSAAAPTPDCILQQSFLSRSRQRE 209
>gi|218515259|ref|ZP_03512099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli 8C-3]
Length = 128
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 86/126 (68%), Positives = 100/126 (79%)
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DTDDH MH E G++ A A LN+VK+RGGRIV VGTTSLRL+E+A EDG I W+G T
Sbjct: 1 DTDDHKMHLESGYVSAEIAARLNAVKARGGRIVCVGTTSLRLIESAAGEDGKIKHWAGAT 60
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E + Y+HAIS YRFYSYGD
Sbjct: 61 GIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMRAAYEHAISTGYRFYSYGDA 120
Query: 354 SLLFQK 359
SLLF+K
Sbjct: 121 SLLFRK 126
>gi|323271361|gb|EGA54787.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 203
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVKV 232
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + ++
Sbjct: 12 YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQT 71
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSG 291
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG
Sbjct: 72 KCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSG 131
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +G
Sbjct: 132 WTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEHIQSCKFDMFG 191
Query: 352 DTSLLFQ 358
D L+ Q
Sbjct: 192 DCMLIIQ 198
>gi|213417400|ref|ZP_03350542.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 196
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVKV 232
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + ++
Sbjct: 5 YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKIQT 64
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSG 291
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG
Sbjct: 65 KCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSG 124
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +G
Sbjct: 125 WTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFG 184
Query: 352 DTSLLFQ 358
D L+ Q
Sbjct: 185 DCMLIIQ 191
>gi|219685368|ref|ZP_03540187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
gi|219673141|gb|EED30161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
Length = 258
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 91/275 (33%), Positives = 138/275 (50%), Gaps = 17/275 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPCSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ + I + R+ + ++ SK G++ F
Sbjct: 59 FNNSKVRKSRMYAE-----SEMGNNIEFLILDRIGTDLFTALISKSKKQIVGNVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L + +L F + E G +P+PPYI R D D Y
Sbjct: 114 LMGEILSKNNSEI------VLKFDNNVDE--DYFEKHGFVPIPPYIK--RDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 QTVYSKYVGSAASATAGLHFSRDLFSAFEKNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRL 275
H E I+ A L + K G +I+S+GTT+LR
Sbjct: 224 HFETFLIENSVAARLENAKFLGKKILSIGTTTLRP 258
>gi|47094637|ref|ZP_00232269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 4b H7858]
gi|47016987|gb|EAL07888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 4b H7858]
Length = 174
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 16/187 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI + +G +PLPPYI + Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RY 164
Query: 181 QTTYAKI 187
QT YAK
Sbjct: 165 QTVYAKE 171
>gi|213580920|ref|ZP_03362746.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 120
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Query: 250 PTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFITPGYRFRAVD 307
A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI PGY+++ +D
Sbjct: 1 EVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVID 60
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 61 ALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 110
>gi|218509644|ref|ZP_03507522.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli Brasil 5]
Length = 348
Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 69/345 (20%), Positives = 122/345 (35%), Gaps = 19/345 (5%)
Query: 22 PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINR 81
R SARL+VV P+ + D ++L + D IV N+ + A L+G
Sbjct: 8 DRQSARLLVVEPD----GTMRDLPRANLGTLFDPGDLIVANDAATLPASLHGTHLQCGKT 63
Query: 82 REKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKW------ 134
E ++ L V+ + D L + RL+ ++
Sbjct: 64 IEVRLAGWLSPSAPVRFLAIVFGSGDHRTRTEDRLQPPALSSGDRLQLGPLEARVERILD 123
Query: 135 NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAP 194
+ + L F + + ++ G ++ + D T A + AP
Sbjct: 124 HPRFVELNFEGTRAAMFAGLAQHGRPIQYAHV-----PEPLALWDVWTRIAARPVAFEAP 178
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
+A +++ I +T G + D + E I T
Sbjct: 179 SASFALDWHIVQAWRRREIGFATLTHAAGISSTG---DPALDSRLPFDEPYHIPECTVAQ 235
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFH 314
+ + RG RI+++GT+ +R LE A DG + G I G R VD +++ H
Sbjct: 236 VARAQLRGSRIIAIGTSVVRALEAAANPDGSVRAGDGIATGRIACGTPLRVVDAVLTGVH 295
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
P + L+ AF + YR + +GD+ LL ++
Sbjct: 296 QPGESHFELLRAFADDSLLASASTALTACGYRAHEFGDSMLLNRQ 340
>gi|34763570|ref|ZP_00144505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27886759|gb|EAA23897.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 222
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM++ I ++ +L D +V N
Sbjct: 13 LSDYDYFLPEELIGQKPREPRDSAKLMLIDRKTGS---IEHKHFYNIVDYLQKGDVLVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIFGHKD-----TGGVLEILLIKRISLDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK + YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRK----LENKDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
YA+ SVAAPTAGLHFT LL +++
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLKKILDK 205
>gi|330937010|gb|EGH41103.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 111
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 264 RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLML 323
R+++VGTTS+R LE+A DG + P+SG T+IFI PG F VD L++NFHLP+STLLML
Sbjct: 2 RVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPGRPFHVVDALVTNFHLPESTLLML 60
Query: 324 VSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
VSAF G ET Y AI H YRF+SYGD + +
Sbjct: 61 VSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 95
>gi|86361286|ref|YP_473173.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli CFN 42]
gi|86285388|gb|ABC94446.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli CFN 42]
Length = 348
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 68/342 (19%), Positives = 116/342 (33%), Gaps = 19/342 (5%)
Query: 22 PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINR 81
R SARL+VV + D ++L + D +V N+ + A L+G
Sbjct: 8 DRQSARLLVVE----ADGRMRDLPRANLGMLFDPGDLVVANDAATLPASLHGTHLRCGKT 63
Query: 82 REKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKW------ 134
E ++ L V+ + D L + RL+ ++
Sbjct: 64 IEIRLAGWLSASAPVRFLAIVFGSGDHRTRTEDRLPPPALSSGDRLQLGPLEARVERVLD 123
Query: 135 NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAP 194
+ + L F + + ++ G ++ + D T A + AP
Sbjct: 124 HPRLVELSFEGTRAAMFAGLAQHGRPIQYAHV-----PEPLALWDVWTRIAARPVAFEAP 178
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
+A L I +T G + D + E I T
Sbjct: 179 SASFALDWRTLQAWRRREIGFATLTHAAGISSTG---DPALDSRLPFDEPYHIPECTVAQ 235
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFH 314
+ + RG RI+++GT+ +R LE A DG + G I G R VD +++ H
Sbjct: 236 VARAQLRGSRIIAIGTSVVRALEAAANPDGSVRAGDGIATGRIACGTPLRVVDAVLTGVH 295
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P + L+ AF + YR + +GD+ LL
Sbjct: 296 QPGESHFELLRAFADDGFLASASTALTACGYRAHEFGDSMLL 337
>gi|145631081|ref|ZP_01786856.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
gi|144983366|gb|EDJ90848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
Length = 120
Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 6/111 (5%)
Query: 254 ALNSVKSRGGRIVSVGTTSLRLLETATTEDGII------NPWSGFTNIFITPGYRFRAVD 307
L+ K G R+++VGTTS+R +E+A P+ T+IFI PG +FR VD
Sbjct: 2 RLSQQKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDTSIFIYPGKKFRVVD 61
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD + +
Sbjct: 62 CLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDAMFINK 112
>gi|262197945|ref|YP_003269154.1| Queuosine biosynthesis protein [Haliangium ochraceum DSM 14365]
gi|262081292|gb|ACY17261.1| Queuosine biosynthesis protein [Haliangium ochraceum DSM 14365]
Length = 363
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 80/351 (22%), Positives = 129/351 (36%), Gaps = 25/351 (7%)
Query: 17 LRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRF 76
P P ++ RL+ + I+ H V L L D +V N+ + A L G
Sbjct: 31 RDPGRPLEATRLLSLRG-----ADIAHHRVGALVELLAPGDLLVLNDAATLPASLRGH-- 83
Query: 77 CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ-------SRLEAT 129
E ++ L R P + + ++ AT
Sbjct: 84 VAGAEVELRLAGALGDRDFPAMFRAVLFGAGDWRQDTERRPPPPLLGPGARIELDGFSAT 143
Query: 130 VIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQG 189
V + LL + ++ V P + + QT YA
Sbjct: 144 VRARAALSPRLLTLEFDRAD-DQLAEAVYRAGRP--VQYRHLDAPLPLSAVQTPYAWRPW 200
Query: 190 SVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDA 249
+V P+ G + LL RL + GI+ F+T G D + E I A
Sbjct: 201 AVEMPSTGRPLSWALLDRLAAAGIEHAFLTHAAGLSATG---DPALDAALPLPERYAIPA 257
Query: 250 PTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDIL 309
TA+A ++RGGRIV+VGTT +R LE+A G I+ +R RAVD +
Sbjct: 258 QTARACRVARARGGRIVAVGTTVVRALESARGVAGAGVATER-----ISRRHRLRAVDGI 312
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
++ H P + L+ AF ++++ A++ Y + GD ++ R
Sbjct: 313 LTGIHAPGESHFELLEAFAAPAALRRVHAEAVAGDYLAHELGDLMMIMPAR 363
>gi|315931775|gb|EFV10730.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 327]
Length = 130
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 58/138 (42%), Positives = 77/138 (55%), Gaps = 8/138 (5%)
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
+HVGAGTF V+ E+ +H MHSE I + + I+ VGTT R +E
Sbjct: 1 MHVGAGTFKSVECENIQEHKMHSEFFNIPQQACEII----DSKQAILGVGTTVTRTIEYY 56
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
SGF ++F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+
Sbjct: 57 ART----KTKSGFCDLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYEL 112
Query: 340 AISHAYRFYSYGDTSLLF 357
AI YRFYSYGD L+
Sbjct: 113 AIKEKYRFYSYGDAMLIL 130
>gi|224532557|ref|ZP_03673180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi WI91-23]
gi|224512500|gb|EEF82878.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi WI91-23]
Length = 272
Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats.
Identities = 91/274 (33%), Positives = 137/274 (50%), Gaps = 19/274 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NSN I+
Sbjct: 1 MKTKEFHFNLPHSLIAQYPSEKRGSSRLMVLDPQLQK--IYHENSVNNILKYINSNIFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ N + R+ N ++ SK G+ F
Sbjct: 59 FNNSKVRKSRIYVESEMSSNFL-------ILDRIDTNLFTALVSKSKKQIIGNFYKFPEG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++ K ++ +L + G + +PLP YI R D D Y
Sbjct: 112 -----LMGEILSKNSSEVVLKFNNDVGED---YFEKHCFVPLPSYIK--RDYDKIDEDRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
+T Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 162 RTIYSKYVGSAASATAGLHFSIDLFSVFENNNIEYDFITLHVGLGTFLPVRSKKVEEHDM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR 274
H E I A L + K G RI+S+ TT+LR
Sbjct: 222 HFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLR 255
>gi|167740108|ref|ZP_02412882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 14]
Length = 191
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 65/204 (31%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G L
Sbjct: 64 NDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD-- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 117 ---AFDVTVGERVEPFFTLHF----PDDCLVLIERHGRLPLPPYIE--HAPDAADETRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLL 205
T +A G+VAAPTAGLHF +L
Sbjct: 168 TVFAANPGAVAAPTAGLHFDDAVL 191
>gi|167564026|ref|ZP_02356942.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia oklahomensis EO147]
Length = 188
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 65/202 (32%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVD-NTSEPPRLVDRRFAELPACVAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + I + + R SK G L
Sbjct: 63 DTKVLKARFFGHKAS-----GGRIEVLIERVTGARTALAQIRASKRPAPGTTLTLAD--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ATV ++ L + I G +PLPPYI DA D YQT
Sbjct: 115 --AFDATVGERVEPFFTLHF----PEDCLELIERYGRLPLPPYIE--HTPDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNL 204
+A G+VAAPTAGLHF +
Sbjct: 167 VFAANPGAVAAPTAGLHFDDAV 188
>gi|255019226|ref|ZP_05291352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL F2-515]
Length = 174
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 86/179 (48%), Positives = 118/179 (65%), Gaps = 6/179 (3%)
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
T +++ G +L FS GI + +G +PLPPYI + YQT YAK
Sbjct: 1 TCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLADQD----RYQTVYAKEN 55
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H MHSE +
Sbjct: 56 GSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLT 115
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRAV 306
+A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+PGY F+AV
Sbjct: 116 EESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAV 174
>gi|87304150|ref|ZP_01086686.1| queuosine biosynthesis protein [Synechococcus sp. WH 5701]
gi|87281443|gb|EAQ73511.1| queuosine biosynthesis protein [Synechococcus sp. WH 5701]
Length = 171
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 74/162 (45%), Positives = 104/162 (64%), Gaps = 4/162 (2%)
Query: 196 AGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQAL 255
AGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED +HSE ++A +A+
Sbjct: 1 AGLHFSDELLAGLQRKGVGLARITLHVGLGTFRPVETEDLTQLELHSEWIEVNASVVEAI 60
Query: 256 NSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITPGYRFRAVDILMSNFH 314
+ R+++VGTTS+R LE A + G++ P++G N+ I PGYRF V L++NFH
Sbjct: 61 QQCRG---RVIAVGTTSVRALEGAAQLQGGVLKPFTGPVNLVIQPGYRFAVVQGLLTNFH 117
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
LPKS+LL+LVSA G E+ +Y AI H YRF+SYGD +
Sbjct: 118 LPKSSLLLLVSALIGREKLLALYAEAIDHEYRFFSYGDAMWI 159
>gi|227874426|ref|ZP_03992606.1| possible S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
gi|227839721|gb|EEJ50171.1| possible S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
Length = 132
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F +DLP IA P+ R S+RLM+++ I D+ +L+ D +V
Sbjct: 1 MNTKDFYYDLPEELIAQDPLLNRSSSRLMLLNKETG---EIEHKHFYDILDYLHPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ ++ L R W +P K +K G + F
Sbjct: 58 LNETKVIPARLYGVK----EDTGAQVEVLLLHRKDKEHWECLVKPGKKLKPGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVF 143
G RL+A ++D G L+ F
Sbjct: 111 -GDGRLKAEIVDILEEGNRLIRF 132
>gi|312147903|gb|ADQ30562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi JD1]
Length = 271
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 88/274 (32%), Positives = 134/274 (48%), Gaps = 20/274 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIGTNLFTALVSKSKKQIIGNFYKFPEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++ K ++ +L + G + +PLP YI R D D Y
Sbjct: 111 -----LMGEILSKNSSEVVLKFNNNVGED---YFEKHCFVPLPSYIK--RDYDKIDEDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 161 QTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGLGTFLPVRSKKVEEHDM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR 274
H E I A L + K G RI+S+ TT+LR
Sbjct: 221 HFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLR 254
>gi|167837802|ref|ZP_02464685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis MSMB43]
Length = 123
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 58/109 (53%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFITPGYRFRAVDILM 310
++ ++RGGR+++VGTTS+R LE A + + T+IFITPGYRFR VD L+
Sbjct: 5 VSQTRARGGRVIAVGTTSMRALEAAARDADAAGRPLAATRADTSIFITPGYRFRVVDRLV 64
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL ++
Sbjct: 65 TNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDARYRFFSYGDAMLLTRR 113
>gi|213025218|ref|ZP_03339665.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 304
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 68/317 (21%), Positives = 135/317 (42%), Gaps = 26/317 (8%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----HMFICKTRRNRLIKIVLEGFLLNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + ++E ++ ++ L + +
Sbjct: 113 FYLVDNPEISIKIEQRFGEESQYRAVVENHEALICYLASHGERLDEYVDSSLFYK----- 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPV 230
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + +
Sbjct: 168 --YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKI 225
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E +
Sbjct: 226 QTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKAS 285
Query: 290 SGFTNIFITPGYRFRAV 306
SG+T ++I PGY+ + V
Sbjct: 286 SGWTALYIHPGYQLKVV 302
>gi|149919287|ref|ZP_01907769.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
gi|149819787|gb|EDM79211.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
Length = 304
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 69/310 (22%), Positives = 125/310 (40%), Gaps = 20/310 (6%)
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+ + A L G + E+ + V + W ++
Sbjct: 2 VNDAATLPASLPGHAWIEGRAEAIELRLLGPVGVDEDRWRAVVFGGGDWREDTDERPAPP 61
Query: 121 DGQ--------SRLEATVIDKWNTGEILLV--FSISGIELERQISLVGTIPLPPYIARKR 170
+ L A V+++ + L+ F +G L + G ++ +
Sbjct: 62 RLELGTNLVLAGGLGARVLERASASPRLIELAFDRAGASLYAALYSAGRPIQYSHLEQ-- 119
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ +QT +A + P+AG +++LL +L + G+ V +T G
Sbjct: 120 ---PEELWSFQTVFAGRPWAAEMPSAGRALSASLLGKLRAKGVLVERLTHAAGLSATG-- 174
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINP 288
+ D + E I A T A+ + ++RG RI++VGTT +R LE A E DG++ P
Sbjct: 175 -DPELDAQLPLPERYDIPARTVAAITAARARGARIIAVGTTVVRALEGAALEHGDGVLRP 233
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
G T + +T + R VD L++ H P + L+ AF ++ + A+ YR +
Sbjct: 234 GPGETALVVTAATQLRVVDALLTGMHAPSESHYRLLRAFLPEALLERAWDAALGAGYRSH 293
Query: 349 SYGDTSLLFQ 358
+GD +LL
Sbjct: 294 EFGDLALLVP 303
>gi|289810777|ref|ZP_06541406.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 272
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 62/283 (21%), Positives = 119/283 (42%), Gaps = 17/283 (6%)
Query: 35 LSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRV 94
I S + ++ D I FN++ +I F RR + I L +
Sbjct: 1 NRSKGEIHKVDFSKVTDYIKEGDVICFNDSTIIN-----HMFICKTRRNRLIKIVLEGFL 55
Query: 95 SPNSWSVYARPSKVIKKGDILHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQ 153
N + + + D+ + + ++E ++ ++ L
Sbjct: 56 LNNRVIISGLLKERLNANDVFYLVDNPEISIKIEQRFGEESQYRAVVENHEALICYLASH 115
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
+ + Y++ ++K GS+ P+AG+HFT +L+ ++ G
Sbjct: 116 GERLDEYVDSSLFYK-------YPDAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGG 168
Query: 214 KVYFVTLHVGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGT 270
+ F+TLHV + ++ + ++ ++ E + TA +N+ K GGRI +VGT
Sbjct: 169 LISFITLHVASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGT 228
Query: 271 TSLRLLETA-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
T R LE+A + E + SG+T ++I PGY+ + VD L++N
Sbjct: 229 TVTRCLESAYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTN 271
>gi|89100781|ref|ZP_01173634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
gi|89084484|gb|EAR63632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
Length = 74
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G + SG+T+IFI PGY F+A+D +++NFHLPKSTL+ML+SA G E Y A+
Sbjct: 1 GRLEAGSGWTSIFIYPGYEFKAIDGMITNFHLPKSTLIMLISALAGRENVLNAYNEAVKE 60
Query: 344 AYRFYSYGDTSLLF 357
YRF+S+GD L+
Sbjct: 61 RYRFFSFGDAMLII 74
>gi|153877504|ref|ZP_02004263.1| S-adenosylmethionine [Beggiatoa sp. PS]
gi|152066032|gb|EDN65737.1| S-adenosylmethionine [Beggiatoa sp. PS]
Length = 95
Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LETA+T G+I P+ G T +FITPGY F+ VD L++NFHLP+STLLMLV AF G +
Sbjct: 1 MRALETASTS-GVIKPYEGETRLFITPGYHFQTVDALLTNFHLPESTLLMLVCAFAGQAQ 59
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+HA++ YRF+SYGD +
Sbjct: 60 VLDAYRHAVAQHYRFFSYGDAMFVEN 85
>gi|258615070|ref|ZP_05712840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium DO]
Length = 133
Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMEDKHFHEIIEELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEKP----DTGAHLEVLLLTNTQGDTWETLIKPAKRAKVGTRISF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVF 143
RL+A V ++ G ++ F
Sbjct: 113 DGRLQAVVKEELEHGGRIIDF 133
>gi|213417524|ref|ZP_03350666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 83
Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 52/73 (71%)
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+I P+ G T IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+
Sbjct: 1 MIEPFFGDTQIFIYPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQK 60
Query: 345 YRFYSYGDTSLLF 357
YRF+SYGD +
Sbjct: 61 YRFFSYGDAMFIT 73
>gi|167847216|ref|ZP_02472724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei B7210]
Length = 92
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 47/81 (58%), Positives = 56/81 (69%)
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A + T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+
Sbjct: 1 AQAAGRPLAATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYR 60
Query: 339 HAISHAYRFYSYGDTSLLFQK 359
HAI YRF+SYGD LL ++
Sbjct: 61 HAIDARYRFFSYGDAMLLTRR 81
>gi|153853723|ref|ZP_01995079.1| hypothetical protein DORLON_01070 [Dorea longicatena DSM 13814]
gi|149753473|gb|EDM63404.1| hypothetical protein DORLON_01070 [Dorea longicatena DSM 13814]
Length = 138
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P+ R S+RL+V+ S H+ ++ +L+ D +V
Sbjct: 1 MKRQDFYYELPEELIAQDPLEDRSSSRLLVLDKETGA---FSHHVFKEITEYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R N W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKV----ETNAKIEVLLLKRKENNVWETLVKPGKKAKVGAKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGE 138
G L VID G
Sbjct: 111 -GDGLLMGEVIDVVEEGN 127
>gi|167920404|ref|ZP_02507495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei BCC215]
Length = 89
Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 54/72 (75%)
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF
Sbjct: 7 ATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRF 66
Query: 348 YSYGDTSLLFQK 359
+SYGD LL ++
Sbjct: 67 FSYGDAMLLTRR 78
>gi|239978745|ref|ZP_04701269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces albus J1074]
Length = 304
Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats.
Identities = 69/321 (21%), Positives = 128/321 (39%), Gaps = 41/321 (12%)
Query: 61 FNNTKVITA----QLNG-----VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
N + + A +L G + + +R + RP
Sbjct: 2 VNTSATLPAAADGRLGGEPVVVHFSTRADGTGPGERWAVELRSPDGRGTTGPRPGG--PA 59
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVF---------SISGIELERQISLVGTIPL 162
G ++ +++ G L + SG + + G
Sbjct: 60 GAVVTLADGA-----RLELVEPLAPGAERLWWARAGGFGAADGSGSAVVAWLRRHGRPIR 114
Query: 163 PPYIARKRPIDARDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
Y R + Y+T +A GS P+AG FT+ ++ L+ G++ V
Sbjct: 115 YAYTER-----DQPLAAYRTVFAAAGEDGGGSAEMPSAGRPFTARTVTELVRAGVQFAPV 169
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLH G + + + E + A +N+V++ GGR+++VGTT++R LE+
Sbjct: 170 TLHTGVASVEAHEPP-------YPERYAVSPHAAWLVNAVRAGGGRVIAVGTTAVRALES 222
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A DG + SG+T + +TP R VD L++ H P+++ L+++ A G ++ Y
Sbjct: 223 AVGPDGRLRAASGWTGLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGAAAVERGYA 282
Query: 339 HAISHAYRFYSYGDTSLLFQK 359
A+ ++ +GD LL ++
Sbjct: 283 AAVRARLLWHEFGDVHLLTRR 303
>gi|167904190|ref|ZP_02491395.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei NCTC 13177]
Length = 97
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 54/72 (75%)
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF
Sbjct: 15 ATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRF 74
Query: 348 YSYGDTSLLFQK 359
+SYGD LL ++
Sbjct: 75 FSYGDAMLLTRR 86
>gi|167825728|ref|ZP_02457199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 9]
Length = 88
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 54/72 (75%)
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF
Sbjct: 6 ATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRF 65
Query: 348 YSYGDTSLLFQK 359
+SYGD LL ++
Sbjct: 66 FSYGDAMLLTRR 77
>gi|284098483|ref|ZP_06385888.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase [Candidatus
Poribacteria sp. WGA-A3]
gi|283830538|gb|EFC34711.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase [Candidatus
Poribacteria sp. WGA-A3]
Length = 85
Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LE+A E G I P G T +FITPG+RF VD L++NFHLP++TLLMLVSAF G+++
Sbjct: 1 MRTLESAIDEAGKIRPGPGETRLFITPGFRFTMVDALLTNFHLPRTTLLMLVSAFGGLDQ 60
Query: 333 TKKMYQHAISHAYRFYSYGDTSLL 356
+ Y AI+ YRFYSYGD L+
Sbjct: 61 LRAAYAEAITARYRFYSYGDAMLI 84
>gi|167912449|ref|ZP_02499540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 112]
Length = 87
Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 54/72 (75%)
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF
Sbjct: 5 ATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRF 64
Query: 348 YSYGDTSLLFQK 359
+SYGD LL ++
Sbjct: 65 FSYGDAMLLTRR 76
>gi|167564027|ref|ZP_02356943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia oklahomensis EO147]
Length = 94
Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 44/72 (61%), Positives = 55/72 (76%)
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI+ YRF
Sbjct: 19 ATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIAARYRF 78
Query: 348 YSYGDTSLLFQK 359
+SYGD LL ++
Sbjct: 79 FSYGDAMLLTRR 90
>gi|289677977|ref|ZP_06498867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae FF5]
Length = 170
Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 82/189 (43%), Gaps = 19/189 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + A L E+ + VG +PLPPYI RP + D Y
Sbjct: 112 GGEAEMVARHDA--------LFELRFAEEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQG 189
QT YA+ G
Sbjct: 162 QTVYAQRAG 170
>gi|167895802|ref|ZP_02483204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 7894]
Length = 79
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 46/68 (67%), Positives = 54/68 (79%)
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYG
Sbjct: 1 ETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYG 60
Query: 352 DTSLLFQK 359
D LL ++
Sbjct: 61 DAMLLTRR 68
>gi|47094202|ref|ZP_00231917.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|47017429|gb|EAL08247.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
Length = 91
Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 53/78 (67%)
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A+ DG + SG+T IFI+PGY FRAVD L++NFHLPKSTL+MLVSA + Y
Sbjct: 13 ASRHDGKLVAESGWTEIFISPGYTFRAVDALITNFHLPKSTLIMLVSALSDRTKILAAYN 72
Query: 339 HAISHAYRFYSYGDTSLL 356
HA+ YRF+S+GD +
Sbjct: 73 HAVEEQYRFFSFGDAMFI 90
>gi|3341650|emb|CAA13168.1| z63f [Vibrio cholerae]
Length = 202
Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 18 RPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFC 77
P R ++RL+ + N + D D+ + D +VFNNT+VI A++ G +
Sbjct: 27 YPKAERTASRLLQLDGNSG---QLVDGTFKDVFELVEPGDLLVFNNTRVIPARMFGRKAS 83
Query: 78 HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTG 137
++ + + ++ + R SK K G L+ D E + +
Sbjct: 84 -----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEND-----EFHAVMQARHD 133
Query: 138 EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAG 197
+ + + + ++ +G +PLPPYI RP + D YQT Y + G+VAAPTAG
Sbjct: 134 ALFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERYQTVYNQKPGAVAAPTAG 191
Query: 198 LHFTSNLLSRL 208
LHF LL ++
Sbjct: 192 LHFDQALLEQI 202
>gi|315931776|gb|EFV10731.1| queuosine biosynthesis family protein [Campylobacter jejuni subsp.
jejuni 327]
Length = 210
Score = 145 bits (367), Expect = 9e-33, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKN---KEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKVS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFKK 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-----SLVGTIPLPPYIARKRPIDA 174
L+ V++ N G + F + L+ +G IPLPPYI R +
Sbjct: 116 D-----LKIRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYIK--REDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIK 214
D DYQ+ +AK G+VAAPTA LHF+ +L L
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKNTKF 208
>gi|218672577|ref|ZP_03522246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli GR56]
Length = 134
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 69/137 (50%), Positives = 87/137 (63%), Gaps = 6/137 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV PN +SDH V DLP+FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPN--AESALSDHHVCDLPSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR+ P+ W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRHRDGA-GGQQMSATLHMRIGPSRWKAFAKPGKRIKEGDRIAFGHS 117
Query: 121 DGQ---SRLEATVIDKW 134
L+ATV +K
Sbjct: 118 GESCMIGSLDATVEEKG 134
>gi|255031026|ref|ZP_05302977.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes LO28]
Length = 149
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 73/149 (48%), Positives = 99/149 (66%), Gaps = 5/149 (3%)
Query: 150 LERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLI 209
+ +G +PLPPYI + YQT YAK GS AAPTAGLHFT +LL ++
Sbjct: 5 FYEVLEQLGEMPLPPYIKEQLADQD----RYQTVYAKENGSAAAPTAGLHFTEDLLEQIS 60
Query: 210 SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVG 269
+ G+++ FVTLHVG GTF PV VEDT +H MHSE + +A+ +N +K++GG++V+VG
Sbjct: 61 AKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLTEESAERINKIKAQGGKVVAVG 120
Query: 270 TTSLRLLET-ATTEDGIINPWSGFTNIFI 297
TTS+R LET A+ DG + SG+T IFI
Sbjct: 121 TTSIRTLETIASRHDGKLVAESGWTEIFI 149
>gi|255027598|ref|ZP_05299584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-003]
Length = 97
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR 104
N+T+V+ A+L+G++ + I L + N+W +
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVK 97
>gi|218459304|ref|ZP_03499395.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli Kim 5]
Length = 251
Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 69/194 (35%), Gaps = 3/194 (1%)
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
I + D T A + AP+A L I +T G
Sbjct: 53 IQYAHVPEPLALWDVWTRIAARPVAFEAPSASFTLDWRTLQAWRRREIGFATLTHAAGIS 112
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
+ D + E I T + + RG RI+++GT+ +R LE A DG
Sbjct: 113 STG---DPALDSRLPFDEPYHIPECTVAQVARAQLRGSRIIAIGTSVVRALEAAANPDGS 169
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ G I G R VD +++ H P + L+ AF + Y
Sbjct: 170 VRAGDGIATGRIACGTPLRVVDAVLTGVHQPGGSHFELLRAFADNGLLDSASTALTACGY 229
Query: 346 RFYSYGDTSLLFQK 359
R + +GD+ LL ++
Sbjct: 230 RAHEFGDSMLLNRQ 243
>gi|218510812|ref|ZP_03508690.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli Brasil 5]
Length = 251
Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 70/194 (36%), Gaps = 3/194 (1%)
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
I + D T A + AP+A L I +T G
Sbjct: 53 IQYAHVPEPLALWDVWTRIAARPVAFEAPSASFALDWRTLQAWRRREIGFATLTHAAGIS 112
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
+ D + E I T + + RG RI+++GT+ +R LE A DG
Sbjct: 113 STG---DPALDSRLPFDEPYHIPECTVAQVARAQLRGSRIIAIGTSVVRALEAAANPDGS 169
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ G I G R VD +++ H P + L+ AF ++ Y
Sbjct: 170 VRAGDGIATGRIACGTPLRVVDAVLTGVHQPGESHFELLRAFADDGFLASASTALTAYGY 229
Query: 346 RFYSYGDTSLLFQK 359
R + +GD+ LL ++
Sbjct: 230 RAHEFGDSMLLNRQ 243
>gi|239993599|ref|ZP_04714123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii ATCC 27126]
Length = 127
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P R ++RL+ + ++ + +D+ F+ D +V
Sbjct: 1 MKLSDFSFELPEKLIAKYPTQQRTASRLLHLDGKTGN---VAHTMFADMLKFVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + S N+ + R SK K G L +
Sbjct: 58 FNNTRVIPARLLGKKE-----TGGQVEVLIERITSDNTALAHVRASKAPKPGTTLILEEK 112
>gi|270593971|ref|ZP_06221487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae HK1212]
gi|270318375|gb|EFA29518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae HK1212]
Length = 113
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D 121
Sbjct: 113 K 113
>gi|222870497|gb|EEF07628.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FDF+LP + IA P R ++RL+ +D + +LP L D +VFN+T
Sbjct: 101 DFDFELPENLIAQHPAAQRSASRLL---DGRDDATPPTDRIFHELPDLLQPGDLLVFNDT 157
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A++ G + + + + N + R SK G +H +
Sbjct: 158 RVLKARIFGEKAS-----GGRLELLVERVLEGNDVVAHMRVSKKPLPGSRIHLCGGKNRG 212
Query: 125 RLEATVIDKWNT 136
+A + +W
Sbjct: 213 GFDAVLRGRWPD 224
>gi|213583663|ref|ZP_03365489.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 150
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 13/163 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLP 163
+ + AT+ + G + V + ++ +G +PLP
Sbjct: 113 ES---IHATMTAR--HGALFEVEFNDPRPVLDILNAIGHMPLP 150
>gi|15594367|ref|NP_212155.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi B31]
gi|2687901|gb|AAC66411.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi B31]
Length = 215
Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 4 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 59 FNNSKARKSRIYAESEMSSN-----VEFLILDRIDTNLFTALVSKSKKQIIGNFYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N+ E++L F+ + E +PLP YI R D D Y
Sbjct: 114 LMDEILS------KNSSEVVLKFNNNVGE--DYFEKHCFVPLPSYIK--RDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
QT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVGA
Sbjct: 164 QTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGA 207
>gi|30231093|gb|AAP23111.1|AF461554_3 QueA [Pseudomonas syringae pv. angulata]
gi|30231119|gb|AAP23131.1|AF461560_3 QueA [Pseudomonas syringae pv. tabaci]
Length = 136
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATV 130
G++ + A
Sbjct: 112 GGEAEMVARH 121
>gi|257487221|ref|ZP_05641262.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 142
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATV 130
G++ + A
Sbjct: 112 GGEAEMVARH 121
>gi|30231107|gb|AAP23122.1|AF461557_3 QueA [Pseudomonas syringae pv. glycinea]
Length = 136
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA RP+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARRPLVERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVQDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATV 130
G++ + A
Sbjct: 112 GGEAEMVARH 121
>gi|218512464|ref|ZP_03509304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli 8C-3]
Length = 169
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 74/156 (47%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
Query: 37 CPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP 96
+SDH V DLP+FL + DA+VFN+TKVI AQL G+R +++S TLHMR+ P
Sbjct: 11 AESALSDHHVYDLPSFLRAGDALVFNDTKVIPAQLEGIRHRDGA-GGQQVSATLHMRIGP 69
Query: 97 NSWSVYARPSKVIKKGDILHFFSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQ 153
+ W +A+P K IK+GD + F L+ATV +K GE+ L F ++G L+
Sbjct: 70 SRWKAFAKPGKRIKEGDRIAFGHSGESCFLGALDATVEEKGEAGEVTLAFDLTGPALDEA 129
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQG 189
I+ VG IPLPPYIA KRP D RD DYQT YA G
Sbjct: 130 IAAVGHIPLPPYIAAKRPEDERDRADYQTIYAPRGG 165
>gi|310814917|ref|YP_003962881.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
gi|308753652|gb|ADO41581.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
Length = 106
Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IALRP PR +A+L+V + ISD V++L A N D +V
Sbjct: 1 MKLSDFDFTLPEDLIALRPAVPRTAAKLLVARGDT-----ISDLTVAELAAQFNPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVY 102
N+TKVI A+L+G+R H I TL + +W
Sbjct: 56 LNDTKVIPARLSGLR--HRGEATARIEVTLLQPTADGAWMAL 95
>gi|167469944|ref|ZP_02334648.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis FV-1]
Length = 98
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPS 106
FNNT+VI A+L G + ++ + + + + + S
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKAS 98
>gi|330902171|gb|EGH33416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudomonas syringae pv. japonica str. M301072PT]
Length = 90
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHIN 80
FNNT+V+ A+L G +
Sbjct: 58 FNNTRVLPARLFGQKASGGK 77
>gi|293418472|ref|ZP_06660907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
gi|291325000|gb|EFE64415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
Length = 65
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 1 MVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 53
>gi|257439750|ref|ZP_05615505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
gi|257197770|gb|EEU96054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
Length = 121
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
K+F +DLP IA P PRDSARLMV+ I + DLP +L D +V NN
Sbjct: 14 KDFWYDLPKELIAQEPADPRDSARLMVL---SQKDDSIQHRIFRDLPEYLEPGDLLVVNN 70
Query: 64 TKVITAQLNG 73
+KV+ A+ G
Sbjct: 71 SKVLPARHRG 80
>gi|325518191|gb|EGC97961.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia sp. TJI49]
Length = 122
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P + D +DLPA + D +VFN
Sbjct: 21 LSDFDFNLPPELIAQTALPDRTASRLLEVDG-AAEPARLVDRRFADLPACIAPGDLLVFN 79
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVI 109
+TKV+ A+ G + I + ++ R SK
Sbjct: 80 DTKVLKARFFGQKAS-----GGRIEVLVERVTGTHTALAQIRASKSP 121
>gi|225166247|ref|ZP_03727949.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
gi|224799506|gb|EEG18033.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
Length = 86
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAI 341
+ I+I P FR VD L++NFH P+STL+ LVSAF GI +++Y AI
Sbjct: 11 AYIAEAGIYIYPPRTFRGVDALVTNFHQPRSTLMCLVSAFLTPGSTDGIAWLRELYAEAI 70
Query: 342 SHAYRFYSYGDTSLLF 357
+ YRF+SYGD L+
Sbjct: 71 AREYRFFSYGDAMLIL 86
>gi|213618788|ref|ZP_03372614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|289812266|ref|ZP_06542895.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 76
Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHI 79
FNNT+VI A+L G +
Sbjct: 58 FNNTRVIPARLFGRKASGG 76
>gi|205374302|ref|ZP_03227101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
coahuilensis m4-4]
Length = 57
Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ +D +++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 4 KGIDAMITNFHLPKSTLIMLVSALAGKEHVLHAYETAVKEKYRFFSFGDAMFI 56
>gi|32419294|gb|AAN85165.1| QueA [Pseudomonas syringae pv. syringae]
Length = 70
Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNG 73
FNNT+VI A+L G
Sbjct: 58 FNNTRVIPARLFG 70
>gi|114778173|ref|ZP_01453060.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
gi|114551591|gb|EAU54145.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
Length = 65
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 34/52 (65%)
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L++NFHLPKSTL+MLVSA G E Y HA YRFYSYGD +
Sbjct: 1 MVDALLTNFHLPKSTLIMLVSALAGRERVLAAYTHAREEGYRFYSYGDAMFV 52
>gi|254387071|ref|ZP_05002347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. Mg1]
gi|194345892|gb|EDX26858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. Mg1]
Length = 157
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 58/94 (61%)
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+++VGTT++R LE+AT DG++ G+T++ +TPG RAVD L++ H P ++ LM++
Sbjct: 59 VIAVGTTAVRALESATGPDGVVRTAGGWTDLVVTPGRGVRAVDGLLTGLHEPGASHLMML 118
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
A G E ++ Y A + ++ GD LL +
Sbjct: 119 EAVAGAEAVRRGYAAARAGLCLWHECGDVHLLLK 152
>gi|213028912|ref|ZP_03343359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhi str.
404ty]
Length = 67
Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQ 70
FNNT+VI A+
Sbjct: 58 FNNTRVIPAR 67
>gi|225552299|ref|ZP_03773239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
gi|225371297|gb|EEH00727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
Length = 53
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 1 MLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFFSYGDAMLILN 51
>gi|270714907|ref|ZP_06223194.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae HK1212]
gi|270315620|gb|EFA27811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae HK1212]
Length = 150
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ G++ V+ ++ + S L + +G +PLP YI RP + D
Sbjct: 6 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPLYI--DRPDEEADKE 63
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 64 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 123
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRI 265
+MH+E + A+ + K G R+
Sbjct: 124 VMHAEYVEVSQEVCNAIIATKKAGKRV 150
>gi|219685389|ref|ZP_03540208.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
gi|219673162|gb|EED30182.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
Length = 53
Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 1 MLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFFSYGDAMLVLN 51
>gi|218671499|ref|ZP_03521169.1| queuine tRNA-ribosyltransferase [Rhizobium etli GR56]
Length = 444
Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/48 (66%), Positives = 36/48 (75%)
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
F LP+STL MLVSAF G E Y+HAIS YRFYSYGD SLLF++R
Sbjct: 19 FPLPRSTLFMLVSAFSGFETMHAAYEHAISTGYRFYSYGDASLLFRER 66
>gi|225164099|ref|ZP_03726381.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
gi|224801305|gb|EEG19619.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
Length = 162
Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 61/161 (37%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 131 IDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYVD------YQT 182
++K G L+ F++ G + + +G +PLPPYIAR + R YQT
Sbjct: 3 LEKDGEGAALVRFTMPGGGGSITEIANRLGDVPLPPYIARGGDAEGRAEERARDIERYQT 62
Query: 183 TYAKI--QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
YA Q +VAAPTAGLHFT LL++L G+ +TLHVG GTF P+ ++H +
Sbjct: 63 VYADRTRQVAVAAPTAGLHFTPELLAQLAGQGVGTADITLHVGLGTFKPIATATIEEHPI 122
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
H EI I T +AL + GR ++VGTT++R +E
Sbjct: 123 HREIYEIPPATQRALLAPA---GRRIAVGTTTVRTVEDFLA 160
>gi|213026254|ref|ZP_03340701.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 66
Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L+
Sbjct: 1 HPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCMLII 60
Query: 358 Q 358
Q
Sbjct: 61 Q 61
>gi|325129853|gb|EGC52659.1| Queuosine biosynthesis family protein [Neisseria meningitidis
OX99.30304]
Length = 133
Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/141 (35%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 81 RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEIL 140
I + + ++ + R SK K G L F + + A ++ + GE+
Sbjct: 2 DSGGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF-----EGGIRAVMVGR--EGELF 54
Query: 141 LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHF 200
+ G + + G +PLPPYI R DA D YQT YAK QG+VAAPTAGLHF
Sbjct: 55 CLRFEGGQTVYELLEQNGHLPLPPYIE--RAADADDDSRYQTVYAKYQGAVAAPTAGLHF 112
Query: 201 TSNLLSRLISIGIKVYFVTLH 221
T LL RL VTLH
Sbjct: 113 TEELLRRLKDKRAVTAEVTLH 133
>gi|1620918|emb|CAA70098.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi]
Length = 108
Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + ++ V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHENSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FNN+KV +++ + + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKVRKSRIY-----VESEMSSNVEFLILDRIGTNLFTALVSKSKKQIIGNFYKFP 108
>gi|229093490|ref|ZP_04224593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-42]
gi|228689961|gb|EEL43765.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-42]
Length = 59
Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ +
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHGGGLLS 57
Query: 61 F 61
F
Sbjct: 58 F 58
>gi|213585165|ref|ZP_03366991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 86
Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
G +PLPPYI RP + D YQT Y++ G+VAAPTAGLHF LL+ L G+++ F
Sbjct: 1 GHMPLPPYI--DRPDENADRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAF 58
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEI 244
VTLHVGAGTF PV+V+ +DHIMHSE
Sbjct: 59 VTLHVGAGTFQPVRVDTIEDHIMHSEY 85
>gi|255030238|ref|ZP_05302189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes LO28]
Length = 46
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDL 49
M V++FDFDLP IA P+ R S+RLMV+ I D +D+
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDI 46
>gi|225549199|ref|ZP_03770172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
gi|225370057|gb|EEG99497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
Length = 111
Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ + + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAE-----SEMSSNVEFLILDRIGTNLFTALVSKSKKQIIGNFYKFPEG 110
>gi|223889170|ref|ZP_03623759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 64b]
gi|223885419|gb|EEF56520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 64b]
Length = 111
Score = 79.3 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYSSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ + + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAE-----SEMSSNVEFLILDRIGTNLFTALVSKSKKQIIGNFYKFPEG 110
>gi|289806685|ref|ZP_06537314.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 62
Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L+ Q
Sbjct: 1 QLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCMLIIQ 57
>gi|255030599|ref|ZP_05302550.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes LO28]
Length = 43
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 317 KSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+STL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 3 ESTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 42
>gi|291532259|emb|CBL05372.1| hypothetical protein MHY_01750 [Megamonas hypermegale ART12/1]
Length = 36
Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 322 MLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ML+SAF G E Y+ A+ YRF+S+GD +
Sbjct: 1 MLISAFAGREYVLSAYEEAVKEKYRFFSFGDAMFI 35
>gi|291559931|emb|CBL38731.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [butyrate-producing bacterium SSC/2]
Length = 47
Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVI 41
M V +F FDLP IA P+ R S+RL+ + N +
Sbjct: 1 MKVSDFTFDLPEELIAQDPLEDRSSSRLLTLDKNTGERSDM 41
>gi|221217457|ref|ZP_03588928.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 72a]
gi|224533899|ref|ZP_03674484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
gi|225549698|ref|ZP_03770663.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
gi|221192735|gb|EEE18951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 72a]
gi|224512902|gb|EEF83268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
gi|225369658|gb|EEG99106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
Length = 95
Score = 73.1 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGV 74
FNN+K +++
Sbjct: 56 FNNSKARKSRIYAE 69
>gi|32419276|gb|AAN85157.1| QueA [Pseudomonas syringae pv. syringae]
Length = 51
Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLR 51
>gi|319651692|ref|ZP_08005819.1| hypothetical protein HMPREF1013_02431 [Bacillus sp. 2_A_57_CT2]
gi|317396759|gb|EFV77470.1| hypothetical protein HMPREF1013_02431 [Bacillus sp. 2_A_57_CT2]
Length = 57
Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPN 34
M V FDF LP IA P+ R S+RLMV+
Sbjct: 1 MKVDWFDFHLPEELIAQTPLADRTSSRLMVLDKK 34
>gi|330904414|gb|EGH34986.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudomonas syringae pv. japonica str. M301072PT]
Length = 63
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 36 SCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHIN 80
++ +DL L D +VFNNT+V+ A+L G +
Sbjct: 4 GPTGALAHRQFTDLLEHLRPGDLMVFNNTRVLPARLFGQKASGGK 48
>gi|254672412|emb|CBA05737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha275]
Length = 43
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 322 MLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
MLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 1 MLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGR 37
>gi|218660412|ref|ZP_03516342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli IE4771]
Length = 38
Score = 67.7 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 26/38 (68%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCP 38
M V FDFDLP RIALRP PRDSARL+VV P+
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPHAESA 38
>gi|325518193|gb|EGC97962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia sp. TJI49]
Length = 86
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 50/72 (69%)
Query: 202 SNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSR 261
LL++L ++G++ +TLHVGAGTF PV+VE+ +H MHSE + + + ++R
Sbjct: 2 EPLLAKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMHSEWYELPQSLVDKIAATRAR 61
Query: 262 GGRIVSVGTTSL 273
GG++++VGTTS+
Sbjct: 62 GGKVIAVGTTSM 73
>gi|225420425|ref|ZP_03762728.1| hypothetical protein CLOSTASPAR_06770 [Clostridium asparagiforme
DSM 15981]
gi|225040935|gb|EEG51181.1| hypothetical protein CLOSTASPAR_06770 [Clostridium asparagiforme
DSM 15981]
Length = 32
Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH 32
M VK+F+FDLP IA P+ R S+RL+V+
Sbjct: 1 MDVKDFNFDLPQELIAQDPLDDRASSRLLVLD 32
>gi|226329118|ref|ZP_03804636.1| hypothetical protein PROPEN_03021 [Proteus penneri ATCC 35198]
gi|225202304|gb|EEG84658.1| hypothetical protein PROPEN_03021 [Proteus penneri ATCC 35198]
Length = 49
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 11 PPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
P + IA P R S RL+ + +S + +D+ +N+ D +VF
Sbjct: 2 PEALIAHYPQPQRSSCRLLSLEGETGA---LSHGIFTDVLDKINAGDLLVF 49
>gi|297518384|ref|ZP_06936770.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Escherichia coli OP50]
Length = 43
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV 46
M V +F F+LP S IA P+ R S RL+ + ++
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTF 43
>gi|207093734|ref|ZP_03241521.1| hypothetical protein HpylHP_13450 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 32
Score = 62.3 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 326 AFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
A G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 1 AMIGLEKTKEIYKIAIEKKYRFYSYGDGMLIL 32
>gi|207108532|ref|ZP_03242694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori HPKX_438_CA4C1]
Length = 60
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAF 52
M ++ +D+ LP IA PV P++ A+L+V I+ + F
Sbjct: 1 MKEFDLESYDYYLPKELIASYPVLPKEKAKLLVYERRSQ---KITHTTFEHVLDF 52
>gi|56413498|ref|YP_150573.1| hypothetical protein SPA1315 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362423|ref|YP_002142060.1| hypothetical protein SSPA1221 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56127755|gb|AAV77261.1| hypothetical protein SPA1315 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197093900|emb|CAR59389.1| hypothetical protein SSPA1221 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 297
Score = 59.6 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 22/208 (10%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTIIN-----YMFICKTRRNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFS-QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + ++E ++ ++ L + +
Sbjct: 113 FYLVDNPEISIKVEQKFSEESQYRAVVENHDALICYLASHGERLDEYVDSSLFYK----- 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFT 201
Y++ ++K GS+ T
Sbjct: 168 --YPDAYRSVFSKKYGSLDVDKGNFSIT 193
>gi|32419303|gb|AAN85169.1| QueA [Pseudomonas syringae pv. syringae]
Length = 35
Score = 59.2 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNL 35
M V +F F+LP S IA P+ R S+RL+ +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPT 35
>gi|32419232|gb|AAN85140.1| QueA [Pseudomonas syringae pv. syringae]
gi|32419336|gb|AAN85179.1| QueA [Pseudomonas syringae pv. syringae]
Length = 33
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP 33
M V +F F+LP S IA P+ R S+RL+ +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDG 33
>gi|30231115|gb|AAP23128.1|AF461559_3 QueA [Pseudomonas syringae pv. phaseolicola]
Length = 31
Score = 56.2 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV 31
M V +F F+LP S IA P+ R S+RL+ +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTL 31
>gi|256027762|ref|ZP_05441596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D11]
Length = 33
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVV 31
+ ++D+ LP I +P PRDSA+LM++
Sbjct: 5 LNDYDYFLPEELIGQKPREPRDSAKLMLI 33
>gi|32419362|gb|AAN85193.1| QueA [Pseudomonas syringae pv. syringae]
Length = 28
Score = 52.7 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARL 28
M V +F F+LP S IA P+ R S+RL
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRL 28
>gi|323271599|gb|EGA55019.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 112
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 1 MMVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVIT 68
D I FN++ +I
Sbjct: 58 EGDVICFNDSTIIN 71
>gi|213421160|ref|ZP_03354226.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 122
Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 47/125 (37%), Gaps = 14/125 (11%)
Query: 2 MVKEFDFDLPPSR-IALRPV-----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNS 55
+ +++DF + I LRP R+ +++V++ + I S + ++
Sbjct: 1 LTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIKE 57
Query: 56 NDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 GDVICFNDSTIIN-----HMFICKTRRNRLIKIVLEGFLLNNRVIISGLLKERLNANDVF 112
Query: 116 HFFSQ 120
+
Sbjct: 113 YLVDN 117
>gi|225552488|ref|ZP_03773428.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
gi|225371486|gb|EEH00916.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
Length = 102
Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 152 RQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLIS 210
G +PLPPYI R D D YQT Y+K GS A+ TAGLHF+ +L S L+
Sbjct: 23 DYFEKHGFVPLPPYIK--RDYDKIDENRYQTIYSKYVGSAASATAGLHFSRDLFSALLK 79
>gi|32419325|gb|AAN85177.1| QueA [Pseudomonas syringae pv. phaseolicola]
Length = 26
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSA 26
M V +F F+LP S IA P+ R S+
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSS 26
>gi|207110724|ref|ZP_03244886.1| hypothetical protein HpylH_16840 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 39
Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 321 LMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L+L S F E + + AI YRFYSYGD L+
Sbjct: 6 LLLNSHFSKKE-IQN--KIAIEKKYRFYSYGDGMLIL 39
>gi|307152539|ref|YP_003887923.1| hypothetical protein Cyan7822_2681 [Cyanothece sp. PCC 7822]
gi|306982767|gb|ADN14648.1| protein of unknown function DUF187 [Cyanothece sp. PCC 7822]
Length = 650
Score = 46.1 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 9/207 (4%)
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N+KV+ L G + C ++ ++ L + VYA K IK F
Sbjct: 409 NSKVMQQTL-GFKSCPNEFNDQWLN-WLIDEAHKQNMKVYAYFEKGIKIDKNSPIFDLAI 466
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + +D+ +G V + E+ + + ++ + IDA + DY
Sbjct: 467 RRKWIVPGVDRTYSGIEHYVLDVEIPEV----AHLFRDISVEFVEKYPNIDAVQWDDYLG 522
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG---AGTFMPVKVEDTDDHI 239
YA + G+V +F + +++ + V F H A + ++
Sbjct: 523 YYADLPGNVDRTKNLTNFVNQMITAMKKANPSVSFDICHHNPYWAKKYFAADWQNWKVDR 582
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIV 266
+ + + + + K G I
Sbjct: 583 VFIQAYNQANFATELIYAKKYNGVAIT 609
>gi|330903857|gb|EGH34429.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 103
Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 11/106 (10%)
Query: 94 VSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQ 153
+ + + R SK K G + G++ + A L E+
Sbjct: 9 LDSHRVLAHVRSSKSPKPGSSI-LIDGGGEAEMVARHDA--------LFELRFAEEVLPL 59
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLH 199
+ VG +PLPPYI RP + D YQT YA+ G+VAAPTA H
Sbjct: 60 LERVGHMPLPPYI--DRPDEGADRERYQTVYAQRAGAVAAPTARPH 103
>gi|32419266|gb|AAN85154.1| QueA [Pseudomonas syringae pv. syringae]
Length = 25
Score = 44.6 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDS 25
M V +F F+LP S IA P+ R S
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRS 25
>gi|32419312|gb|AAN85173.1| QueA [Pseudomonas syringae pv. syringae]
gi|32419349|gb|AAN85187.1| QueA [Pseudomonas syringae pv. syringae]
Length = 24
Score = 44.2 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPR 23
M V +F F+LP S IA P+ R
Sbjct: 1 MRVADFTFELPDSLIARHPLAER 23
>gi|32419245|gb|AAN85142.1| QueA [Pseudomonas syringae pv. persicae]
Length = 22
Score = 41.5 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1 MMVKEFDFDLPPSRIALRPVFP 22
M V +F F+LP S IA P+
Sbjct: 1 MRVADFTFELPDSLIARHPLAE 22
>gi|300176598|emb|CBK24263.2| unnamed protein product [Blastocystis hominis]
Length = 385
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 25/119 (21%)
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGT----TSL 273
+H G +P++V + E+ +++ + RI +GT ++
Sbjct: 103 FMVHYGHSCLIPIQVTQIPVLYIFVELKINVDHLVKSILANVPDDQRIALLGTIQFSQAI 162
Query: 274 RLLETATTED------------------GIINPWSGFTN--IFITPGYRFRAVDILMSN 312
A G +P+ T+ IFI G RF +++N
Sbjct: 163 HQAAAALKPHYPEVIIPQEKPLSRGEVLGCTSPFMPTTDCMIFIADG-RFHVESAMITN 220
>gi|225551901|ref|ZP_03772841.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
gi|225370899|gb|EEH00329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
Length = 40
Score = 40.0 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 1 MMVKEFDFDLPPSRIALRPVFP 22
M KEF F+L S IA P
Sbjct: 1 MKTKEFHFNLSHSLIAQYPSEK 22
>gi|296109825|ref|YP_003616774.1| aminotransferase class I and II [Methanocaldococcus infernus ME]
gi|295434639|gb|ADG13810.1| aminotransferase class I and II [Methanocaldococcus infernus ME]
Length = 417
Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 2 MVKEFDFDLPP-SRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+++E DF LP I P R+ A+++ ++ PN + ++ F ND I
Sbjct: 159 LLEENDF-LPDLENI---PKEVREKAKMLYLNYPNNPTGAKATKKFFKEVVDFAFENDVI 214
Query: 60 VFNNTK 65
V ++
Sbjct: 215 VVHDAA 220
>gi|289177464|gb|ADC84710.1| Aspartate aminotransferase [Bifidobacterium animalis subsp. lactis
BB-12]
Length = 388
Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 13/134 (9%)
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTL--HVGAGTFMPVKVEDTDDHIMHSEIGFIDA 249
+ H L+ + S + +T + T P + D + H I
Sbjct: 182 TSAATRFHLDQPLVRQYWSERTRAVMITSPSNPTGTTIAPDVLRDVCAYAAHHGAWRIMD 241
Query: 250 PTAQALNSVKSRGGRI---VSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
T L V++ G R+ ++V ++ + + + G+ G+ + P + AV
Sbjct: 242 ETYLDLTDVEADGSRVESALAVDPEAM-VCGSFSKFFGMTGWRLGW---MVVPEFALDAV 297
Query: 307 DILMSNF----HLP 316
D L +NF H P
Sbjct: 298 DNLATNFFLGAHTP 311
>gi|183602106|ref|ZP_02963474.1| probable aspartate aminotransferase [Bifidobacterium animalis
subsp. lactis HN019]
gi|219683018|ref|YP_002469401.1| aspartate aminotransferase [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191338|ref|YP_002968732.1| aspartate aminotransferase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196744|ref|YP_002970299.1| aspartate aminotransferase [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|183218599|gb|EDT89242.1| probable aspartate aminotransferase [Bifidobacterium animalis
subsp. lactis HN019]
gi|219620668|gb|ACL28825.1| probable aspartate aminotransferase [Bifidobacterium animalis
subsp. lactis AD011]
gi|240249730|gb|ACS46670.1| aspartate aminotransferase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251298|gb|ACS48237.1| aspartate aminotransferase [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|295794331|gb|ADG33866.1| aspartate aminotransferase [Bifidobacterium animalis subsp. lactis
V9]
Length = 409
Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 13/134 (9%)
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTL--HVGAGTFMPVKVEDTDDHIMHSEIGFIDA 249
+ H L+ + S + +T + T P + D + H I
Sbjct: 160 TSAATRFHLDQPLVRQYWSERTRAVMITSPSNPTGTTIAPDVLRDVCAYAAHHGAWRIMD 219
Query: 250 PTAQALNSVKSRGGRI---VSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
T L V++ G R+ ++V ++ + + + G+ G+ + P + AV
Sbjct: 220 ETYLDLTDVEADGSRVESALAVDPEAM-VCGSFSKFFGMTGWRLGW---MVVPEFALDAV 275
Query: 307 DILMSNF----HLP 316
D L +NF H P
Sbjct: 276 DNLATNFFLGAHTP 289
>gi|238497988|ref|XP_002380229.1| P450 family sporulation-specific N-formyltyrosine oxidase Dit2
[Aspergillus flavus NRRL3357]
gi|220693503|gb|EED49848.1| P450 family sporulation-specific N-formyltyrosine oxidase Dit2
[Aspergillus flavus NRRL3357]
Length = 498
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 301 YRFRAV--DILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
YR + D LM+NFH +S L M+ F G E K
Sbjct: 285 YRLKRARDDGLMTNFHY-RSNLKMMF--FAGHENVKFA 319
>gi|189234658|ref|XP_968806.2| PREDICTED: similar to cullin [Tribolium castaneum]
gi|270002142|gb|EEZ98589.1| hypothetical protein TcasGA2_TC001104 [Tribolium castaneum]
Length = 773
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 45/147 (30%), Gaps = 13/147 (8%)
Query: 27 RLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAI---VFNNTKVITAQLNGVRFCHINRRE 83
RL+ + + SD P FL + D V N+T V +LN R
Sbjct: 342 RLLELFRR---FSKLVHDAFSDDPRFLTARDKAFKAVVNDTTVFRLELNTGRNAGGKVVA 398
Query: 84 KEISCTLHMRVSPNSWSVYARPSKVI-------KKGDILHFFSQDGQSRLEATVIDKWNT 136
E C + + SK + + D+L + T
Sbjct: 399 PESKCPELLANYCDMLLRRTPLSKRLTSEEIESRLKDVLLVLKYVSNKDVFMRYHKAHLT 458
Query: 137 GEILLVFSISGIELERQISLVGTIPLP 163
++L S + E + + + +P
Sbjct: 459 RRLILDASADSEKEEDMVEWLREVGMP 485
>gi|192359027|ref|YP_001981949.1| endo-1,4-beta glucanase [Cellvibrio japonicus Ueda107]
gi|294862438|sp|P27033|GUNC_CELJU RecName: Full=Endoglucanase C; AltName: Full=Cellodextrinase C;
AltName: Full=Cellulase C; AltName:
Full=Endo-1,4-beta-glucanase C; Short=EGC; Flags:
Precursor
gi|190685192|gb|ACE82870.1| endo-1,4-beta glucanase, cel5A [Cellvibrio japonicus Ueda107]
Length = 747
Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 29/254 (11%)
Query: 50 PAFLNSNDAIVFNNT----KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP 105
P L + + NN+ + I + ++ I I+ P S +
Sbjct: 328 PMELYAGNMWWVNNSQGSGRTIQQTMTELKQQGITMLRLPIAPQTLDANDPQGRSPNLKN 387
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
+ I++ + I + +I + I PPY
Sbjct: 388 HQSIRQSNARQALED---------FIKLADQNDIQIFIDIHSCSNYVGWRAGRLDARPPY 438
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ R +Y + SV +H + ++ ++ ++ +G
Sbjct: 439 VDANRVGYDFTREEYSCSATNNPSSV----TRIHAYDK--QKWLANLREIAGLSAKLGVS 492
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
+ + V + +E + QA+N V I+ G ++ A T+DG
Sbjct: 493 NLIGIDVFNEPYDYTWAEWKGMVEEAYQAINEVNPN-MLIIVEGISA-----NANTQDGT 546
Query: 286 INPW----SGFTNI 295
+ G T++
Sbjct: 547 PDTSVPVPHGSTDL 560
>gi|45502|emb|CAA43597.1| cellodextrinase C (CELC) [Cellvibrio japonicus]
Length = 748
Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 29/254 (11%)
Query: 50 PAFLNSNDAIVFNNT----KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP 105
P L + + NN+ + I + ++ I I+ P S +
Sbjct: 329 PMELYAGNMWWVNNSQGSGRTIQQTMTELKQQGITMLRLPIAPQTLDANDPQGRSPNLKN 388
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
+ I++ + I + +I + I PPY
Sbjct: 389 HQSIRQSNARQALED---------FIKLADQNDIQIFIDIHSCSNYVGWRAGRLDARPPY 439
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ R +Y + SV +H + ++ ++ ++ +G
Sbjct: 440 VDANRVGYDFTREEYSCSATNNPSSV----TRIHAYDK--QKWLANLREIAGLSAKLGVS 493
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
+ + V + +E + QA+N V I+ G ++ A T+DG
Sbjct: 494 NLIGIDVFNEPYDYTWAEWKGMVEEAYQAINEVNPN-MLIIVEGISA-----NANTQDGT 547
Query: 286 INPW----SGFTNI 295
+ G T++
Sbjct: 548 PDTSVPVPHGSTDL 561
>gi|94490330|gb|ABF29402.1| nonribosomal peptide synthetase [Xylaria sp. BCC 1067]
Length = 6744
Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 46/125 (36%)
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ + ++++ +++ + S+ + + + ++ + KR
Sbjct: 6360 ITYSRLQISTQVDWYRLEEACRALVRKHASLRTVFVPYRDDILQVVLRQVSFDMKRLKCD 6419
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Y T + G+ P LHF L+SR S I V +T + G P+ +D
Sbjct: 6420 EDLWEYSTKWCTEDGATPVPLGSLHFQPILISRSESDHILVVRMTHALYDGGSFPLISKD 6479
Query: 235 TDDHI 239
Sbjct: 6480 LTSAY 6484
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.312 0.140 0.464
Lambda K H
0.267 0.0431 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,513,052,264
Number of Sequences: 13984884
Number of extensions: 198203495
Number of successful extensions: 393812
Number of sequences better than 10.0: 2123
Number of HSP's better than 10.0 without gapping: 2105
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 384217
Number of HSP's gapped (non-prelim): 2223
length of query: 360
length of database: 4,792,584,752
effective HSP length: 140
effective length of query: 220
effective length of database: 2,834,700,992
effective search space: 623634218240
effective search space used: 623634218240
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 82 (36.1 bits)