HHsearch alignment for GI: 254780181 and conserved domain: PRK05627
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed.
Probab=98.02 E-value=4.6e-05 Score=50.30 Aligned_cols=143 Identities=15% Similarity=0.141 Sum_probs=68.0
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHC---C-EEEEECCCC-------CCCC-CCCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 599965899878489999999999748---9-799964558-------8876-657898999999999764201335544
Q gi|254780181|r 3 RKAVYTGSFDPITNGHMDIIIQALSFV---E-DLVIAIGCN-------SVKT-KGFLSIQERSELIKQSIFHFIPDSSNR 70 (182)
Q Consensus 3 kigifgGsFdPiH~GHL~ia~~a~~~~---D-~vii~~~~~-------p~k~-~~~~s~e~r~~m~~~a~~~~~~~~~~~ 70 (182)
T Consensus 12 ~svvaIG~FDGvH~GHq~li~~~~~~a~~~~~~s~v~TF~phP~~vl~~~~~~~~l~~~~ek~~ll~~~Gid~~~~~~F~ 91 (303)
T PRK05627 12 GCVLTIGNFDGVHRGHQALLARAREIARERGLPSVVMTFEPHPREFFAPDSAPARLTPLRDKAELLAELGVDYVLVLPFD 91 (303)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf 83899985823468999999999999998499789999569999981998886124999999999997399879985676
Q ss_pred --CEEECCCCCCCC-CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CCCEEEEEC-CCCCCCCCHHHHHHHHHC
Q ss_conf --124203333322-10014970799943765201246779989876479--986899706-857211326999999985
Q gi|254780181|r 71 --VSVISFEGLAVN-LAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCP--EIATIALFA-KESSRYVTSTLIRHLISI 144 (182)
Q Consensus 71 --~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~i~l~~-~~~~~~ISST~IR~~i~~ 144 (182)
T Consensus 92 ~~~a~ls~e~Fi~~iL~~~l~~k~ivvG~Df~FG~~r~G~~~~L-~~~~~~~g~~v~~v~~~~~~~~~ISSt~IR~~i~~ 170 (303)
T PRK05627 92 EEFAKLSAEEFIEDLLVKGLNVKFVVVGDDFRFGKKRAGDFELL-QEAGKEFGFEVEVVPEVCEDGERVSSTAIRQALAE 170 (303)
T ss_pred HHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH-HHHHHHCCCCEEECCCEEECCEEEEHHHHHHHHHC
T ss_conf 78765999999999887267844999757733367888899999-99998749618977567538967609999999985
Q ss_pred CC
Q ss_conf 99
Q gi|254780181|r 145 DA 146 (182)
Q Consensus 145 g~ 146 (182)
T Consensus 171 G~ 172 (303)
T PRK05627 171 GD 172 (303)
T ss_pred CC
T ss_conf 98