HHsearch alignment for GI: 254780181 and conserved domain: pfam01467
>pfam01467 CTP_transf_2 Cytidylyltransferase. This family includes: Cholinephosphate cytidylyltransferase. Glycerol-3-phosphate cytidylyltransferase.
Probab=99.85 E-value=9.6e-22 Score=149.70 Aligned_cols=122 Identities=18% Similarity=0.172 Sum_probs=84.0
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHC--CEEEEECCCCC-CCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC
Q ss_conf 965899878489999999999748--97999645588-8766-5789899999999976420133554412420333332
Q gi|254780181|r 6 VYTGSFDPITNGHMDIIIQALSFV--EDLVIAIGCNS-VKTK-GFLSIQERSELIKQSIFHFIPDSSNRVSVISFEGLAV 81 (182)
Q Consensus 6 ifgGsFdPiH~GHL~ia~~a~~~~--D~vii~~~~~p-~k~~-~~~s~e~r~~m~~~a~~~~~~~~~~~~~~~~~~~~~~ 81 (182)
T Consensus 1 i~gGsFdP~H~GHl~i~~~a~~~~~~d~v~~ip~~~~p~k~~~~~~~~~~R~~ml~~a~~~~~~~~v~~~e--------- 71 (148)
T pfam01467 1 LFGGTFDPIHLGHLRLLEQAKELFDLDKIVGVPSDESPHKDTKNLFSAEERLEMLELALEVDPNLEVDDFE--------- 71 (148)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECH---------
T ss_conf 97725798879999999999997699879999767656667888899999999999998239976997330---------
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC----------------------CCCCEEEEECCCCCCCCCHHHHH
Q ss_conf 21001497079994376520124677998987647----------------------99868997068572113269999
Q gi|254780181|r 82 NLAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLC----------------------PEIATIALFAKESSRYVTSTLIR 139 (182)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------------------~~~~~i~l~~~~~~~~ISST~IR 139 (182)
T Consensus 72 -----~~~~~~i~G~D~~~~~~~W~~~~~i~~~~~~~v~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ISST~IR 146 (148)
T pfam01467 72 -----DLDVYFIIGADALVNLRGWRGVTELLPEFQIVVVNRPLDYGLETVFLREELDKYPLGKIVIPDLPYNDISSTEIR 146 (148)
T ss_pred -----HHHHHHHHCCCHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHC
T ss_conf -----267899984990554488787999995077899828999750123413344323577379787875764828862
Q ss_pred HH
Q ss_conf 99
Q gi|254780181|r 140 HL 141 (182)
Q Consensus 140 ~~ 141 (182)
T Consensus 147 ~r 148 (148)
T pfam01467 147 ER 148 (148)
T ss_pred CC
T ss_conf 97