HHsearch alignment for GI: 254780181 and conserved domain: pfam08218
>pfam08218 Citrate_ly_lig Citrate lyase ligase C-terminal domain. This family is composed of the C-terminal domain of citrate lyase ligase EC:6.2.1.22.
Probab=99.12 E-value=1.2e-09 Score=77.53 Aligned_cols=144 Identities=15% Similarity=0.208 Sum_probs=83.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCEEE-EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-----ECCCCCCCCCC
Q ss_conf 98784899999999997489799-9645588876657898999999999764201335544124-----20333332210
Q gi|254780181|r 11 FDPITNGHMDIIIQALSFVEDLV-IAIGCNSVKTKGFLSIQERSELIKQSIFHFIPDSSNRVSV-----ISFEGLAVNLA 84 (182)
Q Consensus 11 FdPiH~GHL~ia~~a~~~~D~vi-i~~~~~p~k~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~~ 84 (182)
T Consensus 8 aNPFT~GH~yLvE~Aa~~~d~l~vFVV~e----D~S~F~~~~R~~LV~~G~~~l~NV~v~~g~~YiIS~aTFP~YFlKd~ 83 (182)
T pfam08218 8 ANPFTLGHRYLVEQAAAENDWVHLFVVSE----DASLFSYEERFALVKQGTKDLDNVTVHSGGDYIISRATFPSYFIKEQ 83 (182)
T ss_pred CCCCCCHHHHHHHHHHHHCCEEEEEEEEC----CCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHCCH
T ss_conf 79885368999999997499899999835----56738899999999997555888699559987897104715553556
Q ss_pred --------------------CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC-CCEEEEECCCC--CCCCCHHHHHHH
Q ss_conf --------------------0149707999437652012467799898764799-86899706857--211326999999
Q gi|254780181|r 85 --------------------KDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCPE-IATIALFAKES--SRYVTSTLIRHL 141 (182)
Q Consensus 85 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~i~l~~~~~--~~~ISST~IR~~ 141 (182)
T Consensus 84 ~~v~~~~~~lD~~iF~~~IApaL~It~RfVG~EP~~~vT~-~YN~~m~~~Lp~~~I~v~~i-~R~~~~~~~ISAS~VR~~ 161 (182)
T pfam08218 84 DVVIKSQTTIDLRIFREYIAPALGITHRYVGEEPFSRVTA-IYNQAMQSELPPAGIEVVEI-PRKEYDGGPISASTVRQA 161 (182)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHH-HHHHHHHHHCCCCCCEEEEE-CCCCCCCCEECHHHHHHH
T ss_conf 8999999999899999962265287633405898987799-99999998668469479995-254569968709999999
Q ss_pred HHCCC--CHHHCCCHHHHHHH
Q ss_conf 98599--95583999999999
Q gi|254780181|r 142 ISIDA--DITSFVPDPVCVFL 160 (182)
Q Consensus 142 i~~g~--~i~~lVP~~V~~yI 160 (182)
T Consensus 162 l~~~~~~~i~~lVP~tT~~~L 182 (182)
T pfam08218 162 IKEGNLEALAKLVPATTLQYL 182 (182)
T ss_pred HHCCCHHHHHHHCCHHHHHHC
T ss_conf 985999999873887557439