HHsearch results for GI: 254780181 and protein with PDBid: 3gmi_A
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCSG, protein structure initiative; 1.91A {Methanocaldococcus jannaschii DSM2661}
Probab=99.61 E-value=2.6e-14 Score=104.15 Aligned_cols=161 Identities=12% Similarity=0.123 Sum_probs=83.7
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCC-C--C-CCCCCCHHHHHHHHHHHHHHHCCCC----------
Q ss_conf 659996589987848999999999974897999645588-8--7-6657898999999999764201335----------
Q gi|254780181|r 2 MRKAVYTGSFDPITNGHMDIIIQALSFVEDLVIAIGCNS-V--K-TKGFLSIQERSELIKQSIFHFIPDS---------- 67 (182)
Q Consensus 2 mkigifgGsFdPiH~GHL~ia~~a~~~~D~vii~~~~~p-~--k-~~~~~s~e~r~~m~~~a~~~~~~~~---------- 67 (182)
+|||-..|.|||+|+||+.++++|.+ .|.+++++++|. + + .+...+...|.+|...+..+.-...
T Consensus 52 ~ki~~i~~EyNPFHnGHlylie~ak~-~d~iI~VmSgnfvQ~~RGepai~~k~~Ra~mAl~~GaDlViELP~~~~~~sa~ 130 (357)
T 3gmi_A 52 DKIVCDFTEYNPLHKGHKYALEKGKE-HGIFISVLPGPLERSGRGIPYFLNRYIRAEMAIRAGADIVVEGPPMGIMGSGQ 130 (357)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHHHHT-SSEEEEEECCTTSBCTTSSBCSSCHHHHHHHHHHHTCSEEEECCCGGGSCHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEECCHH
T ss_conf 82899987328986789999999985-59989996898655566774439999999999982888464367536744278
Q ss_pred ------------CCCCEEECCCC-----CCCCCCCCCCCEE----EEEECCCC----CCHHHH---H-----HHHHHHHH
Q ss_conf ------------54412420333-----3322100149707----99943765----201246---7-----79989876
Q gi|254780181|r 68 ------------SNRVSVISFEG-----LAVNLAKDISAQV----IVRGLRDM----TDFDYE---M-----RMTSVNRC 114 (182)
Q Consensus 68 ------------~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~~----~~~~~~---~-----~~~~~~~~ 114 (182)
..+........ ............. .+...... ..+... . ....+.+.
T Consensus 131 Fa~~aV~ll~~lg~d~l~FG~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~iL~~~~i~~~~i~R~ 210 (357)
T 3gmi_A 131 YMRCLIKMFYSLGAEIIPRGYIPEKTMEKVIDCINKGYHIQVKPYKIICIETGEILGEKLNIDNYVIASMSQMIYKLNRE 210 (357)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECCCHHHHHHHHHHHTTCCEEEETTEEEETTTCCEEESCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
T ss_conf 89889888887297522015888279999999998507737689999886520778888755899975552654411121
Q ss_pred HCCCCCEEEEECCCCCCCCCHHHHHHHHHCCC--CHHHCCCHHHHHHHHHHHH
Q ss_conf 47998689970685721132699999998599--9558399999999999999
Q gi|254780181|r 115 LCPEIATIALFAKESSRYVTSTLIRHLISIDA--DITSFVPDPVCVFLKNIVI 165 (182)
Q Consensus 115 l~~~~~~i~l~~~~~~~~ISST~IR~~i~~g~--~i~~lVP~~V~~yIk~~~~ 165 (182)
..+.....+. ......+|||.||+.++.|+ +++.+||++|.+||++.+.
T Consensus 211 -~~~~~~~~i~-~~~~~~~SAT~IR~~i~~g~~e~i~~~vP~~~~~~l~~~~~ 261 (357)
T 3gmi_A 211 -GLKFNPKFVF-VKRLEGISGTKIREAIFSGKFEDIKNMLPKTTLSILKELYD 261 (357)
T ss_dssp -TCCCCCEEEE-EECSCCCCHHHHHHHHHTTCGGGTGGGSCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCC-CCCCCCCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHH
T ss_conf -1568863123-66545116999999998588779987389999999997412