HHsearch results for GI: 254780181 and protein with PDBid: 3gmi_A

>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCSG, protein structure initiative; 1.91A {Methanocaldococcus jannaschii DSM2661}
Probab=99.61  E-value=2.6e-14  Score=104.15  Aligned_cols=161  Identities=12%  Similarity=0.123  Sum_probs=83.7

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCC-C--C-CCCCCCHHHHHHHHHHHHHHHCCCC----------
Q ss_conf             659996589987848999999999974897999645588-8--7-6657898999999999764201335----------
Q gi|254780181|r    2 MRKAVYTGSFDPITNGHMDIIIQALSFVEDLVIAIGCNS-V--K-TKGFLSIQERSELIKQSIFHFIPDS----------   67 (182)
Q Consensus         2 mkigifgGsFdPiH~GHL~ia~~a~~~~D~vii~~~~~p-~--k-~~~~~s~e~r~~m~~~a~~~~~~~~----------   67 (182)
                      +|||-..|.|||+|+||+.++++|.+ .|.+++++++|. +  + .+...+...|.+|...+..+.-...          
T Consensus        52 ~ki~~i~~EyNPFHnGHlylie~ak~-~d~iI~VmSgnfvQ~~RGepai~~k~~Ra~mAl~~GaDlViELP~~~~~~sa~  130 (357)
T 3gmi_A           52 DKIVCDFTEYNPLHKGHKYALEKGKE-HGIFISVLPGPLERSGRGIPYFLNRYIRAEMAIRAGADIVVEGPPMGIMGSGQ  130 (357)
T ss_dssp             CCEEEEECCCTTCCHHHHHHHHHHHT-SSEEEEEECCTTSBCTTSSBCSSCHHHHHHHHHHHTCSEEEECCCGGGSCHHH
T ss_pred             CCEEEEEEECCCCCHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEECCHH
T ss_conf             82899987328986789999999985-59989996898655566774439999999999982888464367536744278


Q ss_pred             ------------CCCCEEECCCC-----CCCCCCCCCCCEE----EEEECCCC----CCHHHH---H-----HHHHHHHH
Q ss_conf             ------------54412420333-----3322100149707----99943765----201246---7-----79989876
Q gi|254780181|r   68 ------------SNRVSVISFEG-----LAVNLAKDISAQV----IVRGLRDM----TDFDYE---M-----RMTSVNRC  114 (182)
Q Consensus        68 ------------~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~~----~~~~~~---~-----~~~~~~~~  114 (182)
                                  ..+........     .............    .+......    ..+...   .     ....+.+.
T Consensus       131 Fa~~aV~ll~~lg~d~l~FG~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~iL~~~~i~~~~i~R~  210 (357)
T 3gmi_A          131 YMRCLIKMFYSLGAEIIPRGYIPEKTMEKVIDCINKGYHIQVKPYKIICIETGEILGEKLNIDNYVIASMSQMIYKLNRE  210 (357)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEECCCHHHHHHHHHHHTTCCEEEETTEEEETTTCCEEESCCCGGGHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
T ss_conf             89889888887297522015888279999999998507737689999886520778888755899975552654411121


Q ss_pred             HCCCCCEEEEECCCCCCCCCHHHHHHHHHCCC--CHHHCCCHHHHHHHHHHHH
Q ss_conf             47998689970685721132699999998599--9558399999999999999
Q gi|254780181|r  115 LCPEIATIALFAKESSRYVTSTLIRHLISIDA--DITSFVPDPVCVFLKNIVI  165 (182)
Q Consensus       115 l~~~~~~i~l~~~~~~~~ISST~IR~~i~~g~--~i~~lVP~~V~~yIk~~~~  165 (182)
                       ..+.....+. ......+|||.||+.++.|+  +++.+||++|.+||++.+.
T Consensus       211 -~~~~~~~~i~-~~~~~~~SAT~IR~~i~~g~~e~i~~~vP~~~~~~l~~~~~  261 (357)
T 3gmi_A          211 -GLKFNPKFVF-VKRLEGISGTKIREAIFSGKFEDIKNMLPKTTLSILKELYD  261 (357)
T ss_dssp             -TCCCCCEEEE-EECSCCCCHHHHHHHHHTTCGGGTGGGSCHHHHHHHHHHHH
T ss_pred             -CCCCCCCCCC-CCCCCCCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHH
T ss_conf             -1568863123-66545116999999998588779987389999999997412