HHsearch results for GI: 254780181 and protein with PDBid: 3h05_A

>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structural genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.98  E-value=4.6e-33  Score=215.85  Aligned_cols=162  Identities=16%  Similarity=0.165  Sum_probs=117.2

Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC--CCCE----EE
Q ss_conf             96599965899878489999999999748979996455888766578989999999997642013355--4412----42
Q gi|254780181|r    1 MMRKAVYTGSFDPITNGHMDIIIQALSFVEDLVIAIGCNSVKTKGFLSIQERSELIKQSIFHFIPDSS--NRVS----VI   74 (182)
Q Consensus         1 MmkigifgGsFdPiH~GHL~ia~~a~~~~D~vii~~~~~p~k~~~~~s~e~r~~m~~~a~~~~~~~~~--~~~~----~~   74 (182)
                      |+|||||||||||||+||+.+|+++ ..+|+|+|+|+.++++++..++.++|.+|++.+.........  ...+    ..
T Consensus         1 MkkI~ifgGsFdP~h~GHl~i~~~~-~~~d~viv~p~~~~~~k~~~~~~~~R~~m~~~a~~~~~~~~v~v~~~e~~~~~~   79 (177)
T 3h05_A            1 MKKIAIFGSAFNPPSLGHKSVIESL-SHFDLVLLEPSIAHAWGKNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQALYQP   79 (177)
T ss_dssp             CCEEEEEEECCSSCCHHHHHHHTTC-TTSSEEEEEECC-------CCCHHHHHHHHHHHHHHHCCTTEEECCHHHHHC--
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHH-HHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCC
T ss_conf             9579996654554129999999999-726969998202576567878999999999999987312682675444322655


Q ss_pred             CCCCCC---C---CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCH
Q ss_conf             033333---2---2100149707999437652012467799898764799868997068572113269999999859995
Q gi|254780181|r   75 SFEGLA---V---NLAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCPEIATIALFAKESSRYVTSTLIRHLISIDADI  148 (182)
Q Consensus        75 ~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~ISST~IR~~i~~g~~i  148 (182)
                      .....+   .   ........++++.|.+....+..|..+..+....    .   +...+...+||||+||++++.|++|
T Consensus        80 ~~s~~t~~~l~~l~~~~~~~~~~~iiG~D~~~~~~~W~~~~~i~~~~----~---~~~~pr~~~ISST~IR~~l~~g~~i  152 (177)
T 3h05_A           80 GQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITERW----T---VMACPEKVKIRSTDIRNALIEGKDI  152 (177)
T ss_dssp             --CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHS----E---EEECCCSSCCCHHHHHHHHHHTCCC
T ss_pred             CCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCHHHHHHHC----C---EEEECCCCCCCHHHHHHHHHCCCCH
T ss_conf             33123789999887418850317763240676747642789998508----6---7984587784999999999859994


Q ss_pred             HHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             5839999999999999986545
Q gi|254780181|r  149 TSFVPDPVCVFLKNIVISLVKY  170 (182)
Q Consensus       149 ~~lVP~~V~~yIk~~~~~~~k~  170 (182)
                      ++|||++|.+||++..+|.++.
T Consensus       153 ~~~vp~~V~~yI~~~~LY~~~~  174 (177)
T 3h05_A          153 STYTTPTVSELLLNEGLYRETL  174 (177)
T ss_dssp             TTTSCHHHHHHHHC--------
T ss_pred             HHHCCHHHHHHHHHCCCCCCCC
T ss_conf             6978999999999876802543