HHsearch results for GI: 254780182 and protein with PDBid: 1suu_A
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=100.00 E-value=0 Score=595.69 Aligned_cols=312 Identities=25% Similarity=0.456 Sum_probs=297.1
Q ss_pred CCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 01014567818999079705233100000233456521100014641010113323777399995489399982000432
Q gi|254780182|r 529 DEDCIVREDMVVTVSHLGYVKRVPLSVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVWRLPI 608 (910)
Q Consensus 529 ~EdlI~~E~vvV~lS~~GyIKr~~~~~yr~Q~RggkG~~~~~~ke~D~v~~~~~~~t~d~LLfFTs~Gkvy~l~v~~IP~ 608 (910)
.||||++|+|+|++|++|||||+|+++|++|+|||+|+.++++|++|++.+++.|+|||+||||||.|++|++++|+||+
T Consensus 1 ~EdlI~~e~v~v~lT~~GyiKR~~~~~~~~q~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~G~~y~i~v~~Ip~ 80 (312)
T 1suu_A 1 MSDLMQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKD 80 (312)
T ss_dssp -------CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC
T ss_pred CCCCCCCCCEEEEEECCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEEECCC
T ss_conf 96556888889999689878874079975114788873345146896799999953886389987888499988453000
Q ss_pred CCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEEECHHHHHHCCCCCEEEEEECCCCEEEEEE
Q ss_conf 24445655412454536556200256630125666871799994799189842368620477722786615898578889
Q gi|254780182|r 609 GSPQARGKALINILSLNQGERITTIMPFPEDESSWNNLYVVFATKHGNVRRNKLSDFIQINRSGKIAMKLDSRDEILSVE 688 (910)
Q Consensus 609 ~sr~skG~pi~nll~l~~~E~I~ail~~~~~~~~~~~~~Lvl~Tk~G~VKkt~l~ef~~~r~~G~~aikLkegD~Li~v~ 688 (910)
++|+++|+||.|++++.++|+|++++++.++. .+.||+|+|++|+|||+++++|.+.+++|+.|++|+++|++++|.
T Consensus 81 ~~~~~~G~~i~~ll~l~~~e~ii~~~~~~~~~---~~~~lvl~Tk~G~iKr~~l~~~~~~~~~g~~a~kL~~~D~lv~v~ 157 (312)
T 1suu_A 81 SSRASKGQNISELINLGDQEEILTIKNSKDLT---DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAE 157 (312)
T ss_dssp -------CBGGGTSCCCTTCCEEEEEEESCCC---TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEE
T ss_pred CCCCCCCCEEEEECCCCCCCEEEECCCCCCCC---CCCEEEEEECCCCEEEEEHHHHHHHCCCCEEEECCCCCCEEEEEE
T ss_conf 57133780801333788763177603674314---301599995067155662588310140211663168997788899
Q ss_pred ECCCCCEEEEEECCCEEEEEEHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 61898269999369859997587623547866553576752899869998973366654200000122233333334555
Q gi|254780182|r 689 TCTQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVRGISLAKGDQVISMAIVLHADADYDERICYMKHMSAQRRLISGD 768 (910)
Q Consensus 689 ~~~~~~~Iil~T~~G~~lrF~~~evr~~~GR~a~GVkgIkL~~~D~Vv~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (910)
.++++++++++|++|+++||+++++|+| ||+|+||++|+|+++|+|+++.++.
T Consensus 158 ~~~~~~~i~i~t~~G~~lrf~~~ei~~~-gr~a~GVk~i~L~~~d~v~~~~~~~-------------------------- 210 (312)
T 1suu_A 158 IVFKDEKVICLSKKGSAFIFNSRDVRLT-NRGTQGVCGMKLKEGDLFVKVLSVK-------------------------- 210 (312)
T ss_dssp EECTTCEEEEEETTSEEEEEEGGGSCBC-CTTBCCEECCCCCTTCCEEEEEECT--------------------------
T ss_pred EECCCCEEEEECCCCCEEEEEHHCCCCC-CCCCCCCCCEEECCCCEEEEEEEEC--------------------------
T ss_conf 9079834787547870698403306545-8776782024726998599999735--------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEECC
Q ss_conf 44444444333222223200111012568679999759934530178848667577414887606777768689999728
Q gi|254780182|r 769 TEEITSLKNDSSVEGNISEERCQELKLKEQFILTVSEKGFGKRTSSYDFRISNRSGKGIRATDVSKINEIGALVAVFPVN 848 (910)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~IL~vTe~G~GKRt~~~eyr~q~RGgkGv~~ik~~~~n~~g~lv~~~~V~ 848 (910)
.++++|++|++|||||+++++||.++|||+|+++|+++++ +.|.|++++.|+
T Consensus 211 ---------------------------~~~~ll~iT~~G~gKr~~~~e~~~~~Rg~~Gv~~~k~~~~-~~~~vv~~~~v~ 262 (312)
T 1suu_A 211 ---------------------------ENPYLLIVSENGYGKRLNMSKISELKRGATGYTSYKKSDK-KAGSVVDAIAVS 262 (312)
T ss_dssp ---------------------------TCSEEEEEETTSEEEEEEGGGSCBCCTTCCCEECSCTTCT-TTCSEEEEEEEC
T ss_pred ---------------------------CCCEEEEEECCCCEEECCCHHHHCCCCCCCCEEEEEECCC-CCCCEEEEEEEC
T ss_conf ---------------------------8862988836996698462342002557776598980478-887489999968
Q ss_pred CCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEECC
Q ss_conf 996499994599899999010554451568738898089987999998356
Q gi|254780182|r 849 DNDQIILVSDKGTLIRVPVNEIRIASRATKGVVIFSTAKDERVVSVERIRE 899 (910)
Q Consensus 849 ~~DeIlliT~~G~iiR~~v~~I~~~gR~a~GV~i~~L~~~D~Vv~va~i~~ 899 (910)
++|+|+++|++|+++|+++++||.+||+|+||++|+| ++|++++++++.+
T Consensus 263 ~~d~i~l~T~~g~~ir~~~~~i~~~gR~~~Gv~~~~l-~~d~~v~v~~v~~ 312 (312)
T 1suu_A 263 EDDEILLVSKRSKALRTVAGKVSEQGKDARGIQVLFL-DNDSLVSVSKFIK 312 (312)
T ss_dssp TTCEEEEEETTCEEEEEEGGGSCBCCTTCCCEECSCC-SSCCEEEEEECC-
T ss_pred CCCEEEEEECCCEEEEEEHHHCCCCCCCCCCEEEEEC-CCCCEEEEEEECC
T ss_conf 9998999958998999984354777877898488988-9997999999509