HHsearch results for GI: 254780182 and protein with PDBid: 1wp5_A

>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=100.00  E-value=0  Score=593.68  Aligned_cols=314  Identities=25%  Similarity=0.422  Sum_probs=291.7

Q ss_pred             CCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCC
Q ss_conf             14567818999079705233100000233456521100014641010113323777399995489399982000432244
Q gi|254780182|r  532 CIVREDMVVTVSHLGYVKRVPLSVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVWRLPIGSP  611 (910)
Q Consensus       532 lI~~E~vvV~lS~~GyIKr~~~~~yr~Q~RggkG~~~~~~ke~D~v~~~~~~~t~d~LLfFTs~Gkvy~l~v~~IP~~sr  611 (910)
                      ||++|+|+|++|+.|||||+|+++|++|+|+|.|     +|++|++.+++.|+|||+||||||.||||+++||+||+++|
T Consensus         1 LI~~E~vvV~lS~~GyIKr~~~~~~~~~~~~~~~-----~k~~D~v~~~~~~~t~d~ll~fT~~Grvy~i~v~eiP~~~~   75 (323)
T 1wp5_A            1 MVASEDVIVTVTKDGYVKRTSLRSYAASNGQDFA-----MKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRW   75 (323)
T ss_dssp             CCSCCEEEEEEETTCEEEEEEHHHHHHTTTCCCC-----CCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred             CCCCCCEEEEEECCCEEEEEEHHHHCCCCCCCCC-----CCCCCEEEEEEEECCCCEEEEEECCCEEEEEEEEECCCCCC
T ss_conf             9888878999937985898067993114788786-----57884389999985898799993898799999052877533


Q ss_pred             CCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEEECHHHHHHCCC-CCEEEEEECCCCEEEEEEEC
Q ss_conf             45655412454536556200256630125666871799994799189842368620477-72278661589857888961
Q gi|254780182|r  612 QARGKALINILSLNQGERITTIMPFPEDESSWNNLYVVFATKHGNVRRNKLSDFIQINR-SGKIAMKLDSRDEILSVETC  690 (910)
Q Consensus       612 ~skG~pi~nll~l~~~E~I~ail~~~~~~~~~~~~~Lvl~Tk~G~VKkt~l~ef~~~r~-~G~~aikLkegD~Li~v~~~  690 (910)
                      +++|+||.|++++.++|+|++++++.++.   .+.||+|+|++|++||+++++|.+.++ +|+.+|+|+++|+|++|.++
T Consensus        76 ~~~G~~i~nll~l~~~e~ii~~~~~~~~~---~~~~ll~~Tk~G~iKr~~l~e~~~~~~~~g~~~i~L~~~D~l~~v~~~  152 (323)
T 1wp5_A           76 KDLGQHIANIIPIDRDEEIIKAIPINDFE---LNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLT  152 (323)
T ss_dssp             TSCCEEGGGTSCCCTTCCEEEEEEESCTT---SSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCEEEECCCCCCC---CCCEEEEEECCCCEEEEEHHHHCCCCCCCHHEEEECCCCCCCCCEEEC
T ss_conf             35783121225666676356503445455---674699998888233865566101123330002433665555516843


Q ss_pred             CCCCEEEEEECCCEEEEEEHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             89826999936985999758762354786655357675289986999897336665420000012223333333455544
Q gi|254780182|r  691 TQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVRGISLAKGDQVISMAIVLHADADYDERICYMKHMSAQRRLISGDTE  770 (910)
Q Consensus       691 ~~~~~Iil~T~~G~~lrF~~~evr~~~GR~a~GVkgIkL~~~D~Vv~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  770 (910)
                      +++++|+++|++|++|||+++++|+| ||+|+||+||+|+++|+||++.++.+                           
T Consensus       153 ~~~~~i~l~t~~G~~lrf~~~~vr~~-gr~a~GVk~i~L~~~D~vv~~~~v~~---------------------------  204 (323)
T 1wp5_A          153 DGMNELFLVTHNGYALWFDESEVSIV-GVRAAGVKGMNLKEGDYIVSGQLITS---------------------------  204 (323)
T ss_dssp             CSCSEEEEEETTSEEEEEEGGGSCBC-CSSCCCEECCCCCTTCCEEEEEEECC---------------------------
T ss_pred             CCCEEEEEEECCCEEEEECCCCCCCC-CCCCCCCCCCCCCCCCEEEEEEEEEE---------------------------
T ss_conf             89848997404982897034542346-87656730202478988999999960---------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC
Q ss_conf             44444433322222320011101256867999975993453017884866757741488760677776868999972899
Q gi|254780182|r  771 EITSLKNDSSVEGNISEERCQELKLKEQFILTVSEKGFGKRTSSYDFRISNRSGKGIRATDVSKINEIGALVAVFPVNDN  850 (910)
Q Consensus       771 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~IL~vTe~G~GKRt~~~eyr~q~RGgkGv~~ik~~~~n~~g~lv~~~~V~~~  850 (910)
                                               ++++||++|++|||||+++++||.++|||+|++++++.+++ ...|+++..++++
T Consensus       205 -------------------------~~~~ll~iT~~G~gKr~~~~e~~~~~Rg~kGv~~~k~~k~~-~~~v~~~~v~~~~  258 (323)
T 1wp5_A          205 -------------------------KDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKAN-PHRISGFVVAQDS  258 (323)
T ss_dssp             -------------------------TTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSS-CCCEEEEEEECTT
T ss_pred             -------------------------CCCEEEEEECCCCEEECCHHHHHHCCCCCCCEEEECCCCCC-CCEEEEEEECCCC
T ss_conf             -------------------------57269998508814751145633115578870610133567-8248899976899


Q ss_pred             CEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCC
Q ss_conf             649999459989999901055445156873889808998799999835665556655
Q gi|254780182|r  851 DQIILVSDKGTLIRVPVNEIRIASRATKGVVIFSTAKDERVVSVERIRESEIVDEAE  907 (910)
Q Consensus       851 DeIlliT~~G~iiR~~v~~I~~~gR~a~GV~i~~L~~~D~Vv~va~i~~~e~~de~e  907 (910)
                      |+|+++|++|+++|+++++||.+||+|+||++++|+++|+|+++++++++|.+||.+
T Consensus       259 d~i~i~T~~g~~~r~~~~~i~~~gR~~~Gv~li~l~~~d~vvsv~~v~~~d~~e~~~  315 (323)
T 1wp5_A          259 DTIYLQTEKSFIETIKVGDIRFSDRYSNGSFVLDEEENGRVISVWKVEAEDKTEKLA  315 (323)
T ss_dssp             CEEEEEETTSCEEEEEGGGSCBCCSSSCCEESSCHHHHCCEEEEEEECSSCHHHHHH
T ss_pred             CEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCC
T ss_conf             889999599889998700267678868887979889998999999868776641001