HHsearch results for GI: 254780182 and protein with PDBid: 2xkj_E
>2xkj_E Topoisomerase IV; type IIA topoisomerase; 2.20A {Acinetobacter baumannii} PDB: 2xkk_A*
Probab=100.00 E-value=0 Score=1112.15 Aligned_cols=495 Identities=40% Similarity=0.656 Sum_probs=472.4
Q ss_pred CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCCC
Q ss_conf 76432356660099999876787779988631375400089736789999999878999998113404255664366887
Q gi|254780182|r 9 DEEEEKGITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCARISGEVMGKYHPH 88 (910)
Q Consensus 9 ~~~~~~~i~~~~~~~~m~~syl~Ya~svI~~RAlPd~rDGlKpv~Rrily~m~~~~~~~~~~~~K~a~ivg~v~gkyHPH 88 (910)
..-.+.....+++.+.+.+.|+.||||||.+|||||++||||||||||||+|+++++.++.++.|||++||+|+|+||||
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~ys~~~~~~R~iP~~~DGLKp~QRkIL~~~~k~~l~~~~k~~k~a~~vg~v~~~~yhH 345 (767)
T 2xkj_E 266 TSLAHHATENRSVAEFTEQAYLNYAMYVIMDRALPHISDGLKPVQRRIVYAMSELGLKSSGKPKKSARTVGDVLGKYHPH 345 (767)
T ss_dssp --------CEEEHHHHHHHHHHHHHHHHHHHHTCCBTTTSCCHHHHHHHHHHHHTTCCTTSCCEEHHHHHHHHHHHTCCS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 55565454564299999999987777766640256154405588899999999874057741788887889886233888
Q ss_pred CHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEEC
Q ss_conf 0478999999712201115613147887088776-972013578999789999998630768405330689885485034
Q gi|254780182|r 89 GNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDG-DPPAAERYTECRLQKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVL 167 (910)
Q Consensus 89 Gd~siy~a~v~maq~~~~r~plidg~GnfGs~dg-d~~AA~RYte~rl~~~~~~~l~~i~~~tv~~~~n~D~~~~EP~vl 167 (910)
||+|+|+|+|+|||+|++|+||++|||||||++| ++|||||||||||++++..++.++|.++++|.+||||+..||+++
T Consensus 346 Ge~Sl~~tiv~MAQ~fsnNipLl~p~GqFGsr~gg~daAa~RYI~t~Ls~~~~~if~~~D~~~l~y~~~~d~~~~eP~~y 425 (767)
T 2xkj_E 346 GDSACYEAMVLMAQPFSYRYPLIEGQGNWGSPDDPKSFAAMRYTEAKLSAYSELLLSELGQGTSEWQDNFDGSLKEPITL 425 (767)
T ss_dssp CHHHHHHHHHHHHCTTTCSSCSEECSSCCCBTTBTTCCCCTTTCEEEECGGGHHHHTTTTTTCSCEEECTTSSSEEESSC
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCEECCCCCEECCCCC
T ss_conf 61577788999724543187650114576766899444557888736788899861055731330311789826677522
Q ss_pred CCCCCCCHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC-CHHHHHHHHHHCCC
Q ss_conf 32273211016761010133178985478999999887618776888888634586688744344-75889999870120
Q gi|254780182|r 168 CARYPNVLVNGGGGIAVGMATNIPTHNLGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVIL-GRTGIKNAYATGRG 246 (910)
Q Consensus 168 P~~~P~lL~nG~~GIAvGmaTnippHNl~Ev~~a~~~~i~~p~~~~~eL~~~i~GPDFPTGG~I~-~~~~i~~~y~tGrG 246 (910)
|..+|++||||++||||||||||||||+.|||++|+++|++++++.+++++++|||||||||.|. +.+++.++|.||+|
T Consensus 426 ~piIPmvLVNG~~GIgtG~ST~IP~hNp~eII~~i~~~l~~~~~~~e~~~~~~p~p~~p~g~~i~~~~~~~~~~~~~g~G 505 (767)
T 2xkj_E 426 PARVPNILLNGTTGIAVGMATDIPPHNLREVVKGTIALIRNPQTSDEKLAEYIPAPDLPTKAEIITPPEELLKIQTTGRG 505 (767)
T ss_dssp CCSSCHHHHHCEEEEETTEEEEECCCCHHHHHHHHHHHHHCTTCCHHHHHHHCCSCCCSSSCEECCCHHHHHHHHHHSEE
T ss_pred CCCCHHHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCCC
T ss_conf 65353998647864102443177987789999999999728655646786215789899874796688888887762897
Q ss_pred EEEEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC-CEEEEEEECCC-CCHHHHH
Q ss_conf 389999886543367845999924644352899999999998716650144587303746-55799994798-8778999
Q gi|254780182|r 247 SIVIRGVSHIEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQ-GYRVVIELKRG-ASADVIL 324 (910)
Q Consensus 247 ~i~iR~k~~ie~~~~~k~~ivItEiPY~vnk~~lie~Ia~lv~~~ki~gI~dirDeSdr~-giRivielKr~-~~~~~vl 324 (910)
++.+||+++++ +++|+||||||++++++++++|.++++++|++++.|++|+|+.+ ++|+|++++++ .+++.++
T Consensus 506 ~~~~r~~~~i~-----~~~I~ITELPig~wt~~yke~L~~li~~kki~~i~di~D~s~~~~~irivi~~k~~~~~~e~~~ 580 (767)
T 2xkj_E 506 SYRMRAVYTIE-----KNEIVITELPYQVSGSKVITQIADQMQAKKLPLVVDVRDESDHENPTRLVIVLRSNRIDAEAVM 580 (767)
T ss_dssp EEEEECEEEEE-----TTEEEEEECCTTCCHHHHHHHHHHHHHTTCCTTEEEEEECCCSSCSSCEEEEESCTTSCHHHHH
T ss_pred CEEEEEEEEEC-----CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHH
T ss_conf 17874368970-----6549999528725677799999999975997764212332567786699994476647999999
Q ss_pred HHHHHHCCHHCCCCCEEEEEE-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999976101100000024554-1663000299999999999999999999999999988877899999987406999999
Q gi|254780182|r 325 NQLYRYTSLQSLFSVNMVALN-GYKPERFTLIGILKAFVAFREEVVVRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRI 403 (910)
Q Consensus 325 n~Lyk~T~Lq~sf~~N~~aL~-~g~P~~l~Lk~iL~~fi~hR~evi~rRt~~~L~ka~~R~HILeGL~~Al~nIDeVI~i 403 (910)
+.|||+|+||++|++||+++. +|+|+.+++.+||++|++||.+++.||.+|+|+++++|+|||+||++|+.+||+||++
T Consensus 581 ~~L~k~t~L~~s~s~N~~~i~~~g~~Ky~s~~EIL~eF~~~Rl~~y~KRkey~L~kle~rl~iLegli~~~~~iD~vI~i 660 (767)
T 2xkj_E 581 SHLFATTDLESSYRVNLNMIGEDGRPQVKSIRRILLEWIEIRKKTVTRRLQYHLNRIEKRLHILAGLLIAYLDIDTVIRI 660 (767)
T ss_dssp HHHHHHSTTEEEEEEECEEECTTSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHCCCCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99986401012110468998559974667899999999999999999999999999999999998299999829999999
Q ss_pred HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 86189978987877631269788999997402211122234452369999999998789999888799999989999999
Q gi|254780182|r 404 IRFSPNPETARRELMQRSWNASDIKDLIDLIDDSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIE 483 (910)
Q Consensus 404 IR~S~d~~eAk~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~lSe~QA~AILdMrL~rLt~LE~~kl~~E~~eL~~~ 483 (910)
||+|+++ +..|+++ |+||+.||+|||+|||++||++|+++|++|+++|.++
T Consensus 661 Ir~s~~~---k~~L~~~--------------------------f~l~e~qadyLL~M~L~~LTk~e~~kL~~E~~el~~e 711 (767)
T 2xkj_E 661 IREEDQP---KPVLMEH--------------------------FNIDEIQAEAILELKLRHLAKLEEMEIRHEQDELSAK 711 (767)
T ss_dssp HHHCSSH---HHHHHHH--------------------------HTCCHHHHHHHHHSCHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHCCCCH---HHHHHHH--------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9827846---8999986--------------------------5999999999998699984524799999999999999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC--CCCCCCCCCCCCC
Q ss_conf 99887530498999999999899999840568833100134--3453010145678
Q gi|254780182|r 484 IKECLDILSSRSRLLGIIKQELLSVKDELDTPRRTRIVEGL--LDMEDEDCIVRED 537 (910)
Q Consensus 484 I~~l~~IL~s~~~l~~iI~~EL~eik~kygd~RRT~I~~~~--~~i~~EdlI~~E~ 537 (910)
+++|+++|+|++.+++++++||.+++++||+||||+|.+.. .+++.||+|++|.
T Consensus 712 i~eL~~iL~s~~~l~~~i~~EL~el~kkyg~~RrT~I~~~~e~~~~~~e~~i~~e~ 767 (767)
T 2xkj_E 712 AAIIREQLENPESLKNLIISELKEDAKKFGDERRSPIVARAEAVQIKEQDLMPAET 767 (767)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCSSCBCCCCCCCCC----------
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHCCCCCC
T ss_conf 99999997899999999999999999981898873212665435676533577789