HHsearch results for GI: 254780182 and protein with PDBid: 3ku8_A
>3ku8_A GYRA14, DNA gyrase subunit A; alpha+beta, SH3 domain, topoisomerase, toxin-isomerase compl; HET: DNA; 1.93A {Escherichia coli} PDB: 1x75_A* 3kua_A*
Probab=99.96 E-value=1.6e-29 Score=281.42 Aligned_cols=139 Identities=37% Similarity=0.602 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC
Q ss_conf 99999999999999999999999888778999999874069999998618997898787763126978899999740221
Q gi|254780182|r 358 LKAFVAFREEVVVRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIKDLIDLIDDS 437 (910)
Q Consensus 358 L~~fi~hR~evi~rRt~~~L~ka~~R~HILeGL~~Al~nIDeVI~iIR~S~d~~eAk~~L~~~~~~~~~~~~~~~~~~~~ 437 (910)
-..|+.||.+||+|||+|+|+||++|+||||||++|++|||+||+|||+|+|+++|+.+||++.|..+............
T Consensus 10 ~s~~l~~R~~vItRRt~f~L~Ka~eR~HILeGL~iAl~nID~VI~IIR~S~d~~eAk~~L~~~~w~~~~~~~~~~~~~~~ 89 (156)
T 3ku8_A 10 HSSGLVPRGSHMTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDD 89 (156)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHCSSHHHHHHHHHHSCEECTTHHHHGGGSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCH
T ss_conf 05477776668788679779999998999999999999499999999828982689999998530202168999982330
Q ss_pred CCCCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 11222--------344523699999999987899998887999999899999999988753049899
Q gi|254780182|r 438 SYTIG--------SDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDILSSRSR 496 (910)
Q Consensus 438 ~~~~~--------~~~~f~lSe~QA~AILdMrL~rLt~LE~~kl~~E~~eL~~~I~~l~~IL~s~~~ 496 (910)
...+. ..+.|+||+.||+|||+|||||||+||+++|.+|+++|.++|++|++||+|+++
T Consensus 90 ~~~~~~~~~~~~~~~~~y~LSe~QA~AILemrL~rLT~LE~ekl~~E~~eL~~~I~~l~~IL~~~~r 156 (156)
T 3ku8_A 90 AARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADR 156 (156)
T ss_dssp TTSCTTCCTTSEEETTEEECCHHHHHHHHTCBGGGGSHHHHHHHHHHHHHHHHHHHHHHHTCCSCC-
T ss_pred HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 0020002310034455453799999999996999998778999999999999999999998768888