PSIBLAST alignment of GI: 254780182 and protein with PDB id: 1ab4
>gi|157829780|pdb|1AB4|A Chain A, 59kda Fragment Of Gyrase A From E. Coli Length = 493
Score = 578 bits (1490), Expect = e-162, Method: Composition-based stats.
Identities = 256/492 (52%), Positives = 341/492 (69%), Gaps = 9/492 (1%)
Query: 38 LGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCARISGEVMGKYHPHGNAAIYDAL 97
+GRA+PD+RDGLKPVHRR+L+ M +G +WNK Y K AR+ G+V+GKYHPHG++A+YD +
Sbjct: 1 VGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTI 60
Query: 98 ARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRLQKAAHFLLDDLGKDTVDFRPNY 157
RMAQ +SLR +L++GQGNFGS+DGD AA RYTE RL K AH L+ DL K+TVDF NY
Sbjct: 61 VRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNY 120
Query: 158 DGSFQEPVVLCARYPNVLVNGGGGIAVGMATNIPTHNLGEVVDGCVAVIDNPDIDLDALM 217
DG+ + P V+ + PN+LVNG GIAVGMATNIP HNL EV++GC+A ID+ DI ++ LM
Sbjct: 121 DGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLM 180
Query: 218 EIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIRGVSHIE-KTSGDREQIVVTEIPYQVN 276
E I GPDFPT A+I GR GI+ AY TGRG + IR + +E RE I+V EIPYQVN
Sbjct: 181 EHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVN 240
Query: 277 KAAMLEKIAELVREKRIVDIADLRDESDRQGYRVVIELKRGASADVILNQLYRYTSLQSL 336
KA ++EKIAELV+EKR+ I+ LRDESD+ G R+VIE+KR A +V+LN LY T LQ
Sbjct: 241 KARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVS 300
Query: 337 FSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKYLLNKARDRAHVLVGLAIAVAN 396
F +NMVAL+ +P+ L I+ AFV R EVV RRT + L KARDRAH+L LA+A+AN
Sbjct: 301 FGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALAN 360
Query: 397 LDEVVRIIRFSPNPETARRELMQRSWNASDIKDLIDLIDDSSYTIG--------SDGTMY 448
+D ++ +IR +P P A+ L+ W ++ +++ D + DG Y
Sbjct: 361 IDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYY 420
Query: 449 LSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDILSSRSRLLGIIKQELLSV 508
L+E Q +AIL+LRL +LTGL + + +E L +I E L IL S RL+ +I++EL V
Sbjct: 421 LTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELV 480
Query: 509 KDELDTPRRTRI 520
+++ RRT I
Sbjct: 481 REQFGDKRRTEI 492