PSIBLAST alignment of GI: 254780182 and protein with PDB id: 1bgw
>gi|157830305|pdb|1BGW|A Chain A, Topoisomerase Residues 410-1202 Length = 793
>gi|157830349|pdb|1BJT|A Chain A, Topoisomerase Ii Residues 409-1201 Length = 793
Score = 171 bits (433), Expect = 4e-40, Method: Composition-based stats.
Identities = 87/506 (17%), Positives = 176/506 (34%), Gaps = 52/506 (10%)
Query: 16 ITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCA 75
+ + I+D + + +++ + R+IP++ DG KP R++L+G + + K +K A
Sbjct: 259 LKEIPISDFINKELILFSLADNI-RSIPNVLDGFKPGQRKVLYGCFKKNL---KSELKVA 314
Query: 76 RISGEVMG--KYHPHGNAAIYDALARMAQDW--SLRLLLIEGQGNFGSV--DGDPPAAER 129
+++ V YH HG ++ + +AQ++ S + L+ G FG+ G AA R
Sbjct: 315 QLAPYVSECTAYH-HGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKDAAAAR 373
Query: 130 YTECRLQKAAHFLLDDLGKDTVDFRPNYDGSFQEPV-VLCARYPNVLVNGGGGIAVGMAT 188
Y L K + + D EP L P +LVNG GI G +T
Sbjct: 374 YIYTELNKLTRKIFHPADDPLYKYIQE-DEKTVEPEWYLPI-LPMILVNGAEGIGTGWST 431
Query: 189 NIPTHNLGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSI 248
IP N E++ ++++ +++ G TG R
Sbjct: 432 YIPPFNPLEIIKNIRHLMNDEELEQMHPWF-------------RGWTGTIEEIEPLR--Y 476
Query: 249 VIRGVSHIEKTSGDREQIVVTEIPYQVNKAAMLEKIAELV--REKRIVDIADLRDESDRQ 306
+ G + +TE+P + + + E + + +K I D+ ++ D
Sbjct: 477 RMYGRIE----QIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQHD-D 531
Query: 307 GYRVVIELKRGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFRE 366
+ +I L A Y L S S+ + + + + F
Sbjct: 532 NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEILSEFYY 591
Query: 367 EVVVRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASD 426
+ + + H+ L V V+ I+ +EL + +
Sbjct: 592 VRLEY-------YQKRKDHMSERLQWEVEKYSFQVKFIK-----MIIEKELTVTNKPRNA 639
Query: 427 IKDLIDLIDDSSYTIGSDGTMY-LSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIK 485
I ++ + + ++ I +++ +D + I
Sbjct: 640 IIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVK---GATSDEEDEESSHEDTENVIN 696
Query: 486 ECLDILSSRSRLLGIIKQELLSVKDE 511
++ + LLG+ L + +
Sbjct: 697 GPEELYGTYEYLLGMRIWSLTKERYQ 722