PSIBLAST alignment of GI: 254780182 and protein with PDB id: 3l4j
>gi|297039743|pdb|3L4J|A Chain A, Topoisomerase Ii-Dna Cleavage Complex, Apo Length = 722
>gi|297039748|pdb|3L4K|A Chain A, Topoisomerase Ii-Dna Cleavage Complex, Metal-Bound Length = 722
Score = 168 bits (424), Expect = 5e-39, Method: Composition-based stats.
Identities = 88/492 (17%), Positives = 173/492 (35%), Gaps = 53/492 (10%)
Query: 16 ITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCA 75
+ + I+D + + +++ + R+IP++ DG KP R++L+G + + K +K A
Sbjct: 247 LKEIPISDFINKELILFSLADNI-RSIPNVLDGFKPGQRKVLYGCFKKNL---KSELKVA 302
Query: 76 RISGEVMG--KYHPHGNAAIYDALARMAQDW--SLRLLLIEGQGNFGSV--DGDPPAAER 129
+++ V YH HG ++ + +AQ++ S + L+ G FG+ G AA R
Sbjct: 303 QLAPYVSECTAYH-HGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKDAAAAR 361
Query: 130 -YTECRLQKAAHFLLDDLGKDTVDFRPNYDGSFQEPV-VLCARYPNVLVNGGGGIAVGMA 187
Y L K + + D EP L P +LVNG GI G +
Sbjct: 362 XYIYTELNKLTRKIFHPADDPLYKYIQE-DEKTVEPEWYLPI-LPMILVNGAEGIGTGWS 419
Query: 188 TNIPTHNLGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGS 247
T IP N E++ ++++ +++ G TG R
Sbjct: 420 TYIPPFNPLEIIKNIRHLMNDEELEQMHPWF-------------RGWTGTIEEIEPLR-- 464
Query: 248 IVIRGVSHIEKTSGDREQIVVTEIPYQVNKAAMLEKIAELV--REKRIVDIADLRDESDR 305
+ G + +TE+P + + + E + + +K I D+ ++ D
Sbjct: 465 YRMYGRIE----QIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQHD- 519
Query: 306 QGYRVVIELKRGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFR 365
+ +I L A Y L S S+ + + + + F
Sbjct: 520 DNIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEILSEFY 579
Query: 366 EEVVVRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNAS 425
+ + + H+ L V V+ I+ +EL + +
Sbjct: 580 YVRLEY-------YQKRKDHMSERLQWEVEKYSFQVKFIK-----MIIEKELTVTNKPRN 627
Query: 426 DIKDLIDLIDDSSYTIGSDGTMYLSEV---QTRAILELRLARLTGLGRDDIRNELNSLGI 482
I ++ + + SE +L +R+ LT + +
Sbjct: 628 AIIQELENLGFPRFNKEGKPYYG-SEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKET 686
Query: 483 EIKECLDILSSR 494
E++ L + +
Sbjct: 687 ELENLLKLSAKD 698