PSIBLAST alignment of GI: 254780182 and protein with PDB id: 3lpx

>gi|323462878|pdb|3LPX|A Chain A, Crystal Structure Of Gyra Length = 500
>gi|323462879|pdb|3LPX|B Chain B, Crystal Structure Of Gyra Length = 500
 Score =  559 bits (1439), Expect = e-156,   Method: Composition-based stats.
 Identities = 243/490 (49%), Positives = 342/490 (69%), Gaps = 9/490 (1%)

Query: 40  RAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCARISGEVMGKYHPHGNAAIYDALAR 99
           RA+PD+RDGLKPVHRR+LF M  +G +WNK Y K AR+ G+V+GKYHPHG+ A+YD + R
Sbjct: 2   RALPDVRDGLKPVHRRVLFAMDVLGNDWNKAYKKSARVVGDVIGKYHPHGDTAVYDTIVR 61

Query: 100 MAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRLQKAAHFLLDDLGKDTVDFRPNYDG 159
           MAQ +SLR +L++GQGNFGSVDGD  AA RYTE R+ K AH +L DL K+TVDF PNYDG
Sbjct: 62  MAQPFSLRYMLVDGQGNFGSVDGDSAAAMRYTEIRMSKIAHSILADLDKETVDFVPNYDG 121

Query: 160 SFQEPVVLCARYPNVLVNGGGGIAVGMATNIPTHNLGEVVDGCVAVIDNPDIDLDALMEI 219
           +   P V+  R PN+LVNG  GIAVGMATNIP HNL EV++ C+A+IDN ++  + ++E 
Sbjct: 122 TEHIPAVMPTRVPNLLVNGTSGIAVGMATNIPPHNLTEVINACLALIDNSELTFEEILEH 181

Query: 220 IRGPDFPTGAVILGRTGIKNAYATGRGSIVIRGVSHIEKTS-GDREQIVVTEIPYQVNKA 278
           I GPDFPT  +I GR GI+ AY TGRG I IR  + I+      +E I+V E+PYQVNKA
Sbjct: 182 IPGPDFPTAGIISGRAGIEEAYRTGRGKIKIRARASIDVHETTGKETIIVHELPYQVNKA 241

Query: 279 AMLEKIAELVREKRIVDIADLRDESDRQGYRVVIELKRGASADVILNQLYRYTSLQSLFS 338
            ++EK+AELV++KR+  I+ LRDESD+ G R+VIE+KRG   +V+LN LY+ T +Q  F 
Sbjct: 242 RLIEKMAELVKDKRLEGISALRDESDKDGMRMVIEIKRGEVGEVVLNNLYKLTQMQVSFG 301

Query: 339 VNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKYLLNKARDRAHVLVGLAIAVANLD 398
           +NMVAL   +P+ F +  +L+AFV  R EVV RRT + L KARDRAH+L GL+IA+AN+D
Sbjct: 302 LNMVALTNGQPKIFNIKEMLEAFVLHRREVVTRRTIFELRKARDRAHILEGLSIALANID 361

Query: 399 EVVRIIRFSPNPETARRELMQRSWNASDIKDLIDLIDDSSYTIG--------SDGTMYLS 450
            ++ +I+ S N + +  +L+ + W   ++ +++    + +             DG  YL+
Sbjct: 362 PIIEMIKNSNNRKESEEKLISQGWELGNVANMLSEAGNDAARPEWLEPEYGIRDGLYYLT 421

Query: 451 EVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDILSSRSRLLGIIKQELLSVKD 510
             Q +AI++L+L +L+G+  D I +E  +L   I E + IL++ +RL+ +I +EL++++D
Sbjct: 422 AEQAKAIVDLQLYKLSGMEHDKILSEYKALLDLIAELMHILATPARLMEVICEELVAIRD 481

Query: 511 ELDTPRRTRI 520
           E    RRT I
Sbjct: 482 EFGDERRTEI 491