PSIBLAST alignment of GI: 254780182 and protein with PDB id: 3nuh

>gi|302566244|pdb|3NUH|A Chain A, A Domain Insertion In E. Coli Gyrb Adopts A Novel Fold That Plays A Critical Role In Gyrase Function Length = 525

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 263/515 (51%), Positives = 349/515 (67%), Gaps = 9/515 (1%)

Query: 15  GITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKC 74
            IT V+I +E+++SYL YA +VI+GRA+PD+RDGLKPVHRR+L+    +G +WNK Y K 
Sbjct: 7   EITPVNIEEELKSSYLDYAXSVIVGRALPDVRDGLKPVHRRVLYAXNVLGNDWNKAYKKS 66

Query: 75  ARISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECR 134
           AR+ G+V+GKYHPHG++A+YD + R AQ +SLR  L++GQGNFGS+DGD  AA RYTE R
Sbjct: 67  ARVVGDVIGKYHPHGDSAVYDTIVRXAQPFSLRYXLVDGQGNFGSIDGDSAAAXRYTEIR 126

Query: 135 LQKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATNIPTHN 194
           L K AH L  DL K+TVDF  NYDG+ + P V   + PN+LVNG  GIAVG ATNIP HN
Sbjct: 127 LAKIAHELXADLEKETVDFVDNYDGTEKIPDVXPTKIPNLLVNGSSGIAVGXATNIPPHN 186

Query: 195 LGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIRGVS 254
           L EV++GC+A ID+ DI ++ L E I GPDFPT A+I GR GI+ AY TGRG + IR  +
Sbjct: 187 LTEVINGCLAYIDDEDISIEGLXEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARA 246

Query: 255 HIE-KTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYRVVIE 313
            +E      RE I+V EIPYQVNKA ++EKIAELV+EKR+  I+ LRDESD+ G R+VIE
Sbjct: 247 EVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGXRIVIE 306

Query: 314 LKRGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRT 373
           +KR A  +V+LN LY  T LQ  F +N VAL+  +P+   L  I+ AFV  R EVV RRT
Sbjct: 307 VKRDAVGEVVLNNLYSQTQLQVSFGINXVALHHGQPKIXNLKDIIAAFVRHRREVVTRRT 366

Query: 374 KYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIKDLIDL 433
            + L KARDRAH+L  LA+A+AN+D ++ +IR +P P  A+  L+   W   ++   ++ 
Sbjct: 367 IFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAXLER 426

Query: 434 IDDSSYTIG--------SDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIK 485
             D +             DG  YL+E Q +AIL+LRL +LTGL  + + +E   L  +I 
Sbjct: 427 AGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIA 486

Query: 486 ECLDILSSRSRLLGIIKQELLSVKDELDTPRRTRI 520
           E L IL S  RL  +I++EL  V+++    RRT I
Sbjct: 487 ELLRILGSADRLXEVIREELELVREQFGDKRRTEI 521