RPSBLAST alignment for GI: 254780182 and conserved domain: TIGR01061
>gnl|CDD|162182 TIGR01061, parC_Gpos, DNA topoisomerase IV, A subunit, Gram-positive. Operationally, topoisomerase IV is a type II topoisomerase required for the decatenation of chromosome segregation. Not every bacterium has both a topo II and a topo IV. The topo IV families of the Gram-positive bacteria and the Gram-negative bacteria appear not to represent a single clade among the type II topoisomerases, and are represented by separate models for this reason. Length = 738
Score = 550 bits (1419), Expect = e-157
Identities = 274/729 (37%), Positives = 416/729 (57%), Gaps = 39/729 (5%)
Query: 16 ITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCA 75
I + + + S+ YA +I RA+PD+RDGLKPV RRIL+ M Q G ++K Y K A
Sbjct: 1 IFNKPLEEVFGESFGKYAKYIIQDRALPDIRDGLKPVQRRILYAMFQDGNTFDKPYKKSA 60
Query: 76 RISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRL 135
R GE+MGKYHPHG+++IYDA+ RM+QDW L+E GN GS+DGD AA RYTE RL
Sbjct: 61 RTVGEIMGKYHPHGDSSIYDAMVRMSQDWKNNWTLVEMHGNNGSIDGDNAAAMRYTEARL 120
Query: 136 QKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATNIPTHNL 195
A LL D+ K TV F PN+D S +EP VL A +PN+L+NG GIA G ATNIP HNL
Sbjct: 121 SLIASELLKDIDKKTVSFIPNFDDSEKEPTVLPALFPNLLINGATGIAAGYATNIPPHNL 180
Query: 196 GEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIRGVSH 255
EV+D + ID+P+ +D LMEI++GPDFPTG +I G GI AY TG+G +IR
Sbjct: 181 NEVIDALIYRIDHPNCSVDKLMEIVKGPDFPTGGIIQGEDGISKAYETGKGKFIIRAKIE 240
Query: 256 IEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYRVVIELK 315
IE QIV+TEIPY+ NKA +++KI E++ + ++ I ++RDESDR G R++IELK
Sbjct: 241 IEVNKNGLNQIVITEIPYETNKANIVKKIEEIIFDNKVAGIEEVRDESDRNGIRIIIELK 300
Query: 316 RGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKY 375
+ A+A+ ILN L+++T LQ ++ NMVA+ P + L+ L A++ EV++ R+KY
Sbjct: 301 KDANAEKILNFLFKHTDLQINYNFNMVAIANRTPIQVGLLSYLDAYIKHCHEVIINRSKY 360
Query: 376 LLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIKDLIDLID 435
L KA R ++ GL A++ +DE++++IR S + A+ +LID
Sbjct: 361 ELEKASKRLEIVEGLIKAISIIDEIIKLIRSSEDKSDAKE----------------NLID 404
Query: 436 DSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDILSSRS 495
+ +T E Q AI+ LRL RLT +++ E N L +I I++S
Sbjct: 405 NFKFT----------ENQAEAIVSLRLYRLTNTDIFELKEEQNELEKKIISLEQIIASEK 454
Query: 496 RLLGIIKQELLSVKDELDTPRRTRIVEGL--LDMEDEDCIVREDMVVTVSHLGYVKRVPL 553
++K++L K + RR++I + + + + + + I ED V ++ GY+KR
Sbjct: 455 ARNKLLKKQLEEYKKQFAQQRRSQIEDFINQIKINESELIENEDYYVLITKAGYIKRTSN 514
Query: 554 SVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVWRLPIGSPQA 613
+ + + G +D+D + I +T +L F+SLG + V +L +
Sbjct: 515 RSFASSKYTDFG-----SKDDDILFAQTIANTTDQILIFTSLGNIINIPVHKLADIRWKD 569
Query: 614 RGKALINILSLNQGERITTIMPFPEDESSWNNLYVVFATKHGNVRRNKLSDFIQINRSGK 673
G+ L N ++ ++ E I + +E + +V A+K G V+R +L++ I R+ K
Sbjct: 570 LGEHLSNKITFDENETIVFVGTM--NEFDVDQPILVLASKLGMVKRIELTEL-NIKRNSK 626
Query: 674 --IAMKLDSRDEILSVETCTQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVRGISLAK 731
+ +KL +D ++S ++ I L + LG + F + I V G + GV+G+ L +
Sbjct: 627 ATLCIKLKDKDHLISAFLQQKDKLICLVSDLGYALVFHTNEIPVV-GAKAAGVKGMKLKE 685
Query: 732 GDQVISMAI 740
DQV S I
Sbjct: 686 DDQVKSGVI 694