RPSBLAST alignment for GI: 254780182 and conserved domain: TIGR01061

>gnl|CDD|162182 TIGR01061, parC_Gpos, DNA topoisomerase IV, A subunit, Gram-positive. Operationally, topoisomerase IV is a type II topoisomerase required for the decatenation of chromosome segregation. Not every bacterium has both a topo II and a topo IV. The topo IV families of the Gram-positive bacteria and the Gram-negative bacteria appear not to represent a single clade among the type II topoisomerases, and are represented by separate models for this reason. Length = 738
 Score =  550 bits (1419), Expect = e-157
 Identities = 274/729 (37%), Positives = 416/729 (57%), Gaps = 39/729 (5%)

Query: 16  ITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCA 75
           I +  + +    S+  YA  +I  RA+PD+RDGLKPV RRIL+ M Q G  ++K Y K A
Sbjct: 1   IFNKPLEEVFGESFGKYAKYIIQDRALPDIRDGLKPVQRRILYAMFQDGNTFDKPYKKSA 60

Query: 76  RISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRL 135
           R  GE+MGKYHPHG+++IYDA+ RM+QDW     L+E  GN GS+DGD  AA RYTE RL
Sbjct: 61  RTVGEIMGKYHPHGDSSIYDAMVRMSQDWKNNWTLVEMHGNNGSIDGDNAAAMRYTEARL 120

Query: 136 QKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATNIPTHNL 195
              A  LL D+ K TV F PN+D S +EP VL A +PN+L+NG  GIA G ATNIP HNL
Sbjct: 121 SLIASELLKDIDKKTVSFIPNFDDSEKEPTVLPALFPNLLINGATGIAAGYATNIPPHNL 180

Query: 196 GEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIRGVSH 255
            EV+D  +  ID+P+  +D LMEI++GPDFPTG +I G  GI  AY TG+G  +IR    
Sbjct: 181 NEVIDALIYRIDHPNCSVDKLMEIVKGPDFPTGGIIQGEDGISKAYETGKGKFIIRAKIE 240

Query: 256 IEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYRVVIELK 315
           IE       QIV+TEIPY+ NKA +++KI E++ + ++  I ++RDESDR G R++IELK
Sbjct: 241 IEVNKNGLNQIVITEIPYETNKANIVKKIEEIIFDNKVAGIEEVRDESDRNGIRIIIELK 300

Query: 316 RGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKY 375
           + A+A+ ILN L+++T LQ  ++ NMVA+    P +  L+  L A++    EV++ R+KY
Sbjct: 301 KDANAEKILNFLFKHTDLQINYNFNMVAIANRTPIQVGLLSYLDAYIKHCHEVIINRSKY 360

Query: 376 LLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIKDLIDLID 435
            L KA  R  ++ GL  A++ +DE++++IR S +   A+                 +LID
Sbjct: 361 ELEKASKRLEIVEGLIKAISIIDEIIKLIRSSEDKSDAKE----------------NLID 404

Query: 436 DSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDILSSRS 495
           +  +T          E Q  AI+ LRL RLT     +++ E N L  +I     I++S  
Sbjct: 405 NFKFT----------ENQAEAIVSLRLYRLTNTDIFELKEEQNELEKKIISLEQIIASEK 454

Query: 496 RLLGIIKQELLSVKDELDTPRRTRIVEGL--LDMEDEDCIVREDMVVTVSHLGYVKRVPL 553
               ++K++L   K +    RR++I + +  + + + + I  ED  V ++  GY+KR   
Sbjct: 455 ARNKLLKKQLEEYKKQFAQQRRSQIEDFINQIKINESELIENEDYYVLITKAGYIKRTSN 514

Query: 554 SVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVWRLPIGSPQA 613
             + + +    G      +D+D +    I +T   +L F+SLG +    V +L     + 
Sbjct: 515 RSFASSKYTDFG-----SKDDDILFAQTIANTTDQILIFTSLGNIINIPVHKLADIRWKD 569

Query: 614 RGKALINILSLNQGERITTIMPFPEDESSWNNLYVVFATKHGNVRRNKLSDFIQINRSGK 673
            G+ L N ++ ++ E I  +     +E   +   +V A+K G V+R +L++   I R+ K
Sbjct: 570 LGEHLSNKITFDENETIVFVGTM--NEFDVDQPILVLASKLGMVKRIELTEL-NIKRNSK 626

Query: 674 --IAMKLDSRDEILSVETCTQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVRGISLAK 731
             + +KL  +D ++S     ++  I L + LG  + F  + I V  G  + GV+G+ L +
Sbjct: 627 ATLCIKLKDKDHLISAFLQQKDKLICLVSDLGYALVFHTNEIPVV-GAKAAGVKGMKLKE 685

Query: 732 GDQVISMAI 740
            DQV S  I
Sbjct: 686 DDQVKSGVI 694