RPSBLAST alignment for GI: 254780182 and conserved domain: TIGR01063
>gnl|CDD|162183 TIGR01063, gyrA, DNA gyrase, A subunit. This model describes the common type II DNA topoisomerase (DNA gyrase). Two apparently independently arising families, one in the Proteobacteria and one in Gram-positive lineages, are both designated toposisomerase IV. Length = 800
Score = 1029 bits (2664), Expect = 0.0
Identities = 424/885 (47%), Positives = 586/885 (66%), Gaps = 86/885 (9%)
Query: 16 ITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCA 75
I V+I +EM+ SYL YA++VI+ RA+PD+RDGLKPVHRRIL+ M ++G+ +K Y K A
Sbjct: 1 IVPVNIEEEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYAMYELGLTPDKPYKKSA 60
Query: 76 RISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRL 135
RI G+VMGKYHPHG++AIYD L RMAQD+SLR L++GQGNFGS+DGDPPAA RYTE RL
Sbjct: 61 RIVGDVMGKYHPHGDSAIYDTLVRMAQDFSLRYPLVDGQGNFGSIDGDPPAAMRYTEARL 120
Query: 136 QKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATNIPTHNL 195
K A LL D+ K+TVDF PNYDGS QEP VL +R+PN+LVNG GIAVGMATNIP HNL
Sbjct: 121 TKIAEELLRDIDKETVDFVPNYDGSEQEPTVLPSRFPNLLVNGSSGIAVGMATNIPPHNL 180
Query: 196 GEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIRGVSH 255
GE++D +A IDNPDI + L+E+I+GPDFPTG +ILGR+GI++AY TGRGSIVIR +
Sbjct: 181 GEIIDALLAYIDNPDISIQELLEVIKGPDFPTGGIILGRSGIRSAYETGRGSIVIRARAE 240
Query: 256 IEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYRVVIELK 315
IE+ S RE I+VTEIPYQVNKA ++EKIAELVREK+I I+D+RDESDR+G R+VIELK
Sbjct: 241 IEEDSKGREAIIVTEIPYQVNKARLIEKIAELVREKKIEGISDIRDESDREGIRIVIELK 300
Query: 316 RGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKY 375
R A A+V+LN LY+ T LQ F +NM+AL P+ L +L+AFV R++V+ RRT +
Sbjct: 301 RDAVAEVVLNNLYKQTQLQVSFGINMLALVKGLPKVLNLKELLEAFVEHRKDVITRRTIF 360
Query: 376 LLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIKDLIDLID 435
L KA +RAH+L GL IA+ N+DEV+ +IR S N E A+ L++R
Sbjct: 361 ELRKAEERAHILEGLLIALDNIDEVIALIRASQNTEEAKTRLVER--------------- 405
Query: 436 DSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDILSSRS 495
LSE+Q +AIL++RL RLTGL R+ ++ E L I + DIL+S
Sbjct: 406 -----------FSLSEIQAQAILDMRLQRLTGLEREKLQEEYKELLELIADLEDILASEE 454
Query: 496 RLLGIIKQELLSVKDELDTPRRTRIV-EGLLDMEDEDCIVREDMVVTVSHLGYVKRVPLS 554
R+L II++EL +K++ PRRT IV + D++ ED I RE++VVT+SH GYVKRVP+S
Sbjct: 455 RVLEIIREELEEIKEQFGDPRRTEIVYDESEDIDIEDLIARENVVVTLSHNGYVKRVPVS 514
Query: 555 VYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVWRLPIGSPQAR 614
YR Q+RGGKG SG M+D+DF+ L + STH +LFF++ G VY KV+++P S A+
Sbjct: 515 AYRLQKRGGKGVSGADMKDDDFIEQLLVASTHDYLLFFTNRGKVYWLKVYQIPEASRTAK 574
Query: 615 GKALINILSLNQGERITTIMPFPEDESSWNNLYVVFATKHGNVRRNKLSDFIQINRSGKI 674
GK ++N+L L ERIT I+ E + + LY+ FATK+G V++ L++F I +G I
Sbjct: 575 GKPIVNLLPLQPDERITAILSVKEFD---DGLYLFFATKNGVVKKTSLTEFSNIRSNGII 631
Query: 675 AMKLDSRDEILSVETCTQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVRGISLAKGDQ 734
A+KLD DE++SV + +++++L +K G+ VRFP +R GR + GVRGI L D
Sbjct: 632 AIKLDDGDELISVRLTSGDDEVMLGSKNGKAVRFPEEDVRPM-GRAARGVRGIKLKNEDF 690
Query: 735 VISMAIVLHADADYDERICYMKHMSAQRRLISGDTEEITSLKNDSSVEGNISEERCQELK 794
V+S+ +V SEE
Sbjct: 691 VVSLLVV--------------------------------------------SEE------ 700
Query: 795 LKEQFILTVSEKGFGKRTSSYDFRISNRSGKGIRATDVSKINEIGALVAVFPVNDNDQII 854
++L V+E G+GKRTS ++R ++R GKG+++ ++ N G +V V+D+D+++
Sbjct: 701 ---SYLLIVTENGYGKRTSIEEYRETSRGGKGVKSIKITDRN--GQVVGAIAVDDDDELM 755
Query: 855 LVSDKGTLIRVPVNEIRIASRATKGVVIFSTAKDERVVSVERIRE 899
L++ G LIR V ++ R T+GV + +D+++VSV ++ +
Sbjct: 756 LITSAGKLIRTSVQDVSEQGRNTQGVRLIRLDEDDKLVSVSKVAK 800