RPSBLAST alignment for GI: 254780182 and conserved domain: TIGR01063

>gnl|CDD|162183 TIGR01063, gyrA, DNA gyrase, A subunit. This model describes the common type II DNA topoisomerase (DNA gyrase). Two apparently independently arising families, one in the Proteobacteria and one in Gram-positive lineages, are both designated toposisomerase IV. Length = 800
 Score = 1029 bits (2664), Expect = 0.0
 Identities = 424/885 (47%), Positives = 586/885 (66%), Gaps = 86/885 (9%)

Query: 16  ITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCA 75
           I  V+I +EM+ SYL YA++VI+ RA+PD+RDGLKPVHRRIL+ M ++G+  +K Y K A
Sbjct: 1   IVPVNIEEEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYAMYELGLTPDKPYKKSA 60

Query: 76  RISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRL 135
           RI G+VMGKYHPHG++AIYD L RMAQD+SLR  L++GQGNFGS+DGDPPAA RYTE RL
Sbjct: 61  RIVGDVMGKYHPHGDSAIYDTLVRMAQDFSLRYPLVDGQGNFGSIDGDPPAAMRYTEARL 120

Query: 136 QKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATNIPTHNL 195
            K A  LL D+ K+TVDF PNYDGS QEP VL +R+PN+LVNG  GIAVGMATNIP HNL
Sbjct: 121 TKIAEELLRDIDKETVDFVPNYDGSEQEPTVLPSRFPNLLVNGSSGIAVGMATNIPPHNL 180

Query: 196 GEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIRGVSH 255
           GE++D  +A IDNPDI +  L+E+I+GPDFPTG +ILGR+GI++AY TGRGSIVIR  + 
Sbjct: 181 GEIIDALLAYIDNPDISIQELLEVIKGPDFPTGGIILGRSGIRSAYETGRGSIVIRARAE 240

Query: 256 IEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYRVVIELK 315
           IE+ S  RE I+VTEIPYQVNKA ++EKIAELVREK+I  I+D+RDESDR+G R+VIELK
Sbjct: 241 IEEDSKGREAIIVTEIPYQVNKARLIEKIAELVREKKIEGISDIRDESDREGIRIVIELK 300

Query: 316 RGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKY 375
           R A A+V+LN LY+ T LQ  F +NM+AL    P+   L  +L+AFV  R++V+ RRT +
Sbjct: 301 RDAVAEVVLNNLYKQTQLQVSFGINMLALVKGLPKVLNLKELLEAFVEHRKDVITRRTIF 360

Query: 376 LLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIKDLIDLID 435
            L KA +RAH+L GL IA+ N+DEV+ +IR S N E A+  L++R               
Sbjct: 361 ELRKAEERAHILEGLLIALDNIDEVIALIRASQNTEEAKTRLVER--------------- 405

Query: 436 DSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDILSSRS 495
                        LSE+Q +AIL++RL RLTGL R+ ++ E   L   I +  DIL+S  
Sbjct: 406 -----------FSLSEIQAQAILDMRLQRLTGLEREKLQEEYKELLELIADLEDILASEE 454

Query: 496 RLLGIIKQELLSVKDELDTPRRTRIV-EGLLDMEDEDCIVREDMVVTVSHLGYVKRVPLS 554
           R+L II++EL  +K++   PRRT IV +   D++ ED I RE++VVT+SH GYVKRVP+S
Sbjct: 455 RVLEIIREELEEIKEQFGDPRRTEIVYDESEDIDIEDLIARENVVVTLSHNGYVKRVPVS 514

Query: 555 VYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVWRLPIGSPQAR 614
            YR Q+RGGKG SG  M+D+DF+  L + STH  +LFF++ G VY  KV+++P  S  A+
Sbjct: 515 AYRLQKRGGKGVSGADMKDDDFIEQLLVASTHDYLLFFTNRGKVYWLKVYQIPEASRTAK 574

Query: 615 GKALINILSLNQGERITTIMPFPEDESSWNNLYVVFATKHGNVRRNKLSDFIQINRSGKI 674
           GK ++N+L L   ERIT I+   E +   + LY+ FATK+G V++  L++F  I  +G I
Sbjct: 575 GKPIVNLLPLQPDERITAILSVKEFD---DGLYLFFATKNGVVKKTSLTEFSNIRSNGII 631

Query: 675 AMKLDSRDEILSVETCTQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVRGISLAKGDQ 734
           A+KLD  DE++SV   + +++++L +K G+ VRFP   +R   GR + GVRGI L   D 
Sbjct: 632 AIKLDDGDELISVRLTSGDDEVMLGSKNGKAVRFPEEDVRPM-GRAARGVRGIKLKNEDF 690

Query: 735 VISMAIVLHADADYDERICYMKHMSAQRRLISGDTEEITSLKNDSSVEGNISEERCQELK 794
           V+S+ +V                                            SEE      
Sbjct: 691 VVSLLVV--------------------------------------------SEE------ 700

Query: 795 LKEQFILTVSEKGFGKRTSSYDFRISNRSGKGIRATDVSKINEIGALVAVFPVNDNDQII 854
               ++L V+E G+GKRTS  ++R ++R GKG+++  ++  N  G +V    V+D+D+++
Sbjct: 701 ---SYLLIVTENGYGKRTSIEEYRETSRGGKGVKSIKITDRN--GQVVGAIAVDDDDELM 755

Query: 855 LVSDKGTLIRVPVNEIRIASRATKGVVIFSTAKDERVVSVERIRE 899
           L++  G LIR  V ++    R T+GV +    +D+++VSV ++ +
Sbjct: 756 LITSAGKLIRTSVQDVSEQGRNTQGVRLIRLDEDDKLVSVSKVAK 800