RPSBLAST alignment for GI: 254780182 and conserved domain: PRK13979

>gnl|CDD|184434 PRK13979, PRK13979, DNA topoisomerase IV subunit A; Provisional. Length = 957
 Score =  542 bits (1398), Expect = e-154
 Identities = 316/931 (33%), Positives = 480/931 (51%), Gaps = 97/931 (10%)

Query: 16  ITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCA 75
           I  + + + M  +YL YA+ V   RA+PD+RDGLKPVHRRIL+G   +    +K Y K A
Sbjct: 13  IIKIPLEEAMPENYLPYAVEVAKDRALPDVRDGLKPVHRRILYGAYMLKAFPDKPYYKSA 72

Query: 76  RISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRL 135
           RI G+++GKYHPHG++++YDA+  +AQD++ R+ LI+G GN+GS+DGD  AA RYTE RL
Sbjct: 73  RIVGDILGKYHPHGDSSVYDAMVILAQDFTTRMPLIDGHGNWGSIDGDSAAAMRYTEARL 132

Query: 136 QKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATNIPTHNL 195
              A  +L D+ KD V+   NY  S +EP VL ARYPN+LVNG  GIAVG+ATNIP HNL
Sbjct: 133 TPIAMEMLRDIDKDVVNMVDNYSDSEKEPEVLPARYPNLLVNGAFGIAVGLATNIPPHNL 192

Query: 196 GEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIRGVSH 255
            EV+DG +A IDN +I    LM  I+GPD PTG +++G+  + +AY TG G + +R  + 
Sbjct: 193 KEVIDGTLAYIDNNEITTKELMNYIKGPDLPTGGILIGKKSLLSAYETGEGKVTLRAKTK 252

Query: 256 IEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKR----IVDIADLRDESDRQGYRVV 311
           IEK    R  IV+TE PY+ NKA +L+ I+E+  +K+    + +I+D+RDESDR G R V
Sbjct: 253 IEKLENGRLGIVITEFPYRRNKAKLLQTISEMTADKKHSKALENISDIRDESDRNGIRAV 312

Query: 312 IELKRGA---SADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEV 368
           IE K+ A    A+ +L  LY+ T LQ   S NMVAL   KPE   L  +LK +V  ++EV
Sbjct: 313 IEFKKSADEDVAEKVLKYLYKKTDLQCNISFNMVALADGKPETMGLKTMLKHYVEHQKEV 372

Query: 369 VVRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIK 428
           V RRTK  L  A  R H++ G   A+  +DE+++ IR S + + A   L+++        
Sbjct: 373 VTRRTKKELEIAEKRFHIVEGFIKAIGIMDEIIKTIRSSKSKKDASENLIEK-------- 424

Query: 429 DLIDLIDDSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECL 488
                                ++ Q  AILEL L RLTGL       E   L   IK+  
Sbjct: 425 ------------------FGFTDEQAEAILELMLYRLTGLEIVAFEKEYKELEKLIKKLT 466

Query: 489 DILSSRSRLLGIIKQELLSVKDELDTPRRTRIVE----GLLDMEDEDCIVREDMVVTVSH 544
            ILSS   LL +IK+EL  VK++    RRT I+E      +D+  E+ IV ED+V+T+S+
Sbjct: 467 KILSSEKELLKVIKKELKEVKEKYGDERRTSIIEDDEKAKIDV--EELIVVEDVVITLSN 524

Query: 545 LGYVKRVPLSVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVW 604
            G++KR+PL  Y    R       +  R+ DF   L   +T  ++L F+  G +Y+ K  
Sbjct: 525 EGFIKRIPLKSY---NRSNSNVEDIEYREGDFNKFLIQSNTKDTLLIFTDKGNMYQIKGI 581

Query: 605 RLPIGSPQARGKALINI---LSLNQGERITTIMPFPEDESSWNNLYVVFATKHGNVRRNK 661
            +P    + +G+ L  I   + L   E+I       ED +   +   +F T  G +++  
Sbjct: 582 NIPEFKWKEKGERLDEIIKGIDLES-EKIIEAYSI-EDFTPQKD--FIFITDSGGIKKTS 637

Query: 662 LSDFIQINRSGKIAMKLDSRDEILSVE--TCTQENDIL-LTTKLGQCVRFPISAIRV-FA 717
           L  F   N +  +A+KL   ++++ V+    T+E   + + TK G  + F +    +   
Sbjct: 638 LDKF-VTNYTKLMALKLKKGEKLIKVKLVDRTREEKFIKIKTKKG--LSFTVEEPELEPV 694

Query: 718 GRNSVGVRGISLAKGDQVISMAIV-----------------LHADADYDERICYMKHMSA 760
            RN +G +   L   D +  +                    +      ++    +   S+
Sbjct: 695 DRNIIGYQLFDLLPNDSIKKVDFCDNYEYKEFYVNINKKGIIKISDKDNKSSISVFTNSS 754

Query: 761 QRRLISGDTEEITS-----LKNDSSVEGNISEERCQ----ELKLK---------EQFILT 802
           +  LI  D  ++       L+N  +   NIS         E  +K         +  I  
Sbjct: 755 KNLLIFSDEGKVYKIPAFMLQNIKNEGINISALTGDFEKDEKIIKIISIFEFEEDLSIYF 814

Query: 803 VSEKGFGKRTSSYDFRISNRSGKGIRATDVSKINEIGALVAV-FPVNDNDQIILVSDKGT 861
            S+KG  K+T   +F+    S +  +       ++   LV V    ++   I+L+++KG 
Sbjct: 815 FSKKGLVKKTLLNEFKGEGNSTQAYKFK-----HKEDELVNVDIKEHEEKNILLITEKGM 869

Query: 862 LIRVPVNEIRIASRATKGVVIFSTAKDERVV 892
            IR     +    +   GV   S   +++V+
Sbjct: 870 AIRFKSEAVNPMGKIASGVTGISLKDEDKVI 900