RPSBLAST alignment for GI: 254780182 and conserved domain: PRK13979
>gnl|CDD|184434 PRK13979, PRK13979, DNA topoisomerase IV subunit A; Provisional. Length = 957
Score = 542 bits (1398), Expect = e-154
Identities = 316/931 (33%), Positives = 480/931 (51%), Gaps = 97/931 (10%)
Query: 16 ITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCA 75
I + + + M +YL YA+ V RA+PD+RDGLKPVHRRIL+G + +K Y K A
Sbjct: 13 IIKIPLEEAMPENYLPYAVEVAKDRALPDVRDGLKPVHRRILYGAYMLKAFPDKPYYKSA 72
Query: 76 RISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRL 135
RI G+++GKYHPHG++++YDA+ +AQD++ R+ LI+G GN+GS+DGD AA RYTE RL
Sbjct: 73 RIVGDILGKYHPHGDSSVYDAMVILAQDFTTRMPLIDGHGNWGSIDGDSAAAMRYTEARL 132
Query: 136 QKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATNIPTHNL 195
A +L D+ KD V+ NY S +EP VL ARYPN+LVNG GIAVG+ATNIP HNL
Sbjct: 133 TPIAMEMLRDIDKDVVNMVDNYSDSEKEPEVLPARYPNLLVNGAFGIAVGLATNIPPHNL 192
Query: 196 GEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIRGVSH 255
EV+DG +A IDN +I LM I+GPD PTG +++G+ + +AY TG G + +R +
Sbjct: 193 KEVIDGTLAYIDNNEITTKELMNYIKGPDLPTGGILIGKKSLLSAYETGEGKVTLRAKTK 252
Query: 256 IEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKR----IVDIADLRDESDRQGYRVV 311
IEK R IV+TE PY+ NKA +L+ I+E+ +K+ + +I+D+RDESDR G R V
Sbjct: 253 IEKLENGRLGIVITEFPYRRNKAKLLQTISEMTADKKHSKALENISDIRDESDRNGIRAV 312
Query: 312 IELKRGA---SADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEV 368
IE K+ A A+ +L LY+ T LQ S NMVAL KPE L +LK +V ++EV
Sbjct: 313 IEFKKSADEDVAEKVLKYLYKKTDLQCNISFNMVALADGKPETMGLKTMLKHYVEHQKEV 372
Query: 369 VVRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIK 428
V RRTK L A R H++ G A+ +DE+++ IR S + + A L+++
Sbjct: 373 VTRRTKKELEIAEKRFHIVEGFIKAIGIMDEIIKTIRSSKSKKDASENLIEK-------- 424
Query: 429 DLIDLIDDSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECL 488
++ Q AILEL L RLTGL E L IK+
Sbjct: 425 ------------------FGFTDEQAEAILELMLYRLTGLEIVAFEKEYKELEKLIKKLT 466
Query: 489 DILSSRSRLLGIIKQELLSVKDELDTPRRTRIVE----GLLDMEDEDCIVREDMVVTVSH 544
ILSS LL +IK+EL VK++ RRT I+E +D+ E+ IV ED+V+T+S+
Sbjct: 467 KILSSEKELLKVIKKELKEVKEKYGDERRTSIIEDDEKAKIDV--EELIVVEDVVITLSN 524
Query: 545 LGYVKRVPLSVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVW 604
G++KR+PL Y R + R+ DF L +T ++L F+ G +Y+ K
Sbjct: 525 EGFIKRIPLKSY---NRSNSNVEDIEYREGDFNKFLIQSNTKDTLLIFTDKGNMYQIKGI 581
Query: 605 RLPIGSPQARGKALINI---LSLNQGERITTIMPFPEDESSWNNLYVVFATKHGNVRRNK 661
+P + +G+ L I + L E+I ED + + +F T G +++
Sbjct: 582 NIPEFKWKEKGERLDEIIKGIDLES-EKIIEAYSI-EDFTPQKD--FIFITDSGGIKKTS 637
Query: 662 LSDFIQINRSGKIAMKLDSRDEILSVE--TCTQENDIL-LTTKLGQCVRFPISAIRV-FA 717
L F N + +A+KL ++++ V+ T+E + + TK G + F + +
Sbjct: 638 LDKF-VTNYTKLMALKLKKGEKLIKVKLVDRTREEKFIKIKTKKG--LSFTVEEPELEPV 694
Query: 718 GRNSVGVRGISLAKGDQVISMAIV-----------------LHADADYDERICYMKHMSA 760
RN +G + L D + + + ++ + S+
Sbjct: 695 DRNIIGYQLFDLLPNDSIKKVDFCDNYEYKEFYVNINKKGIIKISDKDNKSSISVFTNSS 754
Query: 761 QRRLISGDTEEITS-----LKNDSSVEGNISEERCQ----ELKLK---------EQFILT 802
+ LI D ++ L+N + NIS E +K + I
Sbjct: 755 KNLLIFSDEGKVYKIPAFMLQNIKNEGINISALTGDFEKDEKIIKIISIFEFEEDLSIYF 814
Query: 803 VSEKGFGKRTSSYDFRISNRSGKGIRATDVSKINEIGALVAV-FPVNDNDQIILVSDKGT 861
S+KG K+T +F+ S + + ++ LV V ++ I+L+++KG
Sbjct: 815 FSKKGLVKKTLLNEFKGEGNSTQAYKFK-----HKEDELVNVDIKEHEEKNILLITEKGM 869
Query: 862 LIRVPVNEIRIASRATKGVVIFSTAKDERVV 892
IR + + GV S +++V+
Sbjct: 870 AIRFKSEAVNPMGKIASGVTGISLKDEDKVI 900