RPSBLAST alignment for GI: 254780182 and conserved domain: COG0188
>gnl|CDD|30537 COG0188, GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair]. Length = 804
Score = 931 bits (2409), Expect = 0.0
Identities = 441/894 (49%), Positives = 584/894 (65%), Gaps = 93/894 (10%)
Query: 10 EEEEKGITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNK 69
+ + I + I DEM+ SYL YA++VI+GRA+PD+RDGLKPV RRIL+ M ++G+ +K
Sbjct: 2 SDPSEEIEPIDIEDEMKRSYLDYAMSVIVGRALPDVRDGLKPVQRRILYAMFELGLTPDK 61
Query: 70 KYVKCARISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAER 129
KY K ARI G+VMGKYHPHG+++IYDAL RMAQD+SLR L++GQGNFGS+DGDP AA R
Sbjct: 62 KYKKSARIVGDVMGKYHPHGDSSIYDALVRMAQDFSLRYPLVDGQGNFGSIDGDPAAAMR 121
Query: 130 YTECRLQKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATN 189
YTE RL K A LL+D+ KDTVDF PNYDGS +EP VL AR+PN+LVNG GIAVGMATN
Sbjct: 122 YTEARLSKIAEELLEDIDKDTVDFVPNYDGSEKEPEVLPARFPNLLVNGSSGIAVGMATN 181
Query: 190 IPTHNLGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIV 249
IP HNLGEV+D +A+IDNPD +D LMEII+GPDFPTG +I+GR+GI+ AY TGRGSI
Sbjct: 182 IPPHNLGEVIDALIALIDNPDATIDELMEIIKGPDFPTGGIIIGRSGIREAYETGRGSIR 241
Query: 250 IRGVSHIEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYR 309
+R + IE T REQIV+TEIPYQVNKA ++EKIAELV+EK+I I+D+RDESDR+G R
Sbjct: 242 VRAKAEIEDTKNGREQIVITEIPYQVNKAKLIEKIAELVKEKKIEGISDIRDESDREGIR 301
Query: 310 VVIELKRGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVV 369
+VIELKR A A+V+LN L++ T LQ+ F+VNM+AL +P+ L IL F+ R EVV
Sbjct: 302 IVIELKRDAVAEVVLNNLFKLTDLQTSFNVNMLALVNGRPKVLNLKEILSEFLEHRLEVV 361
Query: 370 VRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIKD 429
RRT+Y LNKA +R H+L GL IA+ N+DEV+ IIR S + A+ ELM R
Sbjct: 362 TRRTEYELNKAEERLHILEGLLIALLNIDEVIEIIRESKDKPEAKEELMAR--------- 412
Query: 430 LIDLIDDSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLD 489
LSE Q AIL+LRL RLTGL + I EL L EI +
Sbjct: 413 -----------------FGLSEKQAEAILDLRLRRLTGLEEEKIEKELKELEKEIADLEK 455
Query: 490 ILSSRSRLLGIIKQELLSVKDELDTPRRTRIVEGLLDM-EDEDCIVREDMVVTVSHLGYV 548
IL+S RLL IIK+ELL +K + RRT IVE D EDED I ED+VVT+SH GY+
Sbjct: 456 ILASEERLLDIIKKELLEIKKKFGDERRTEIVEEEEDEIEDEDLIAEEDVVVTLSHKGYI 515
Query: 549 KRVPLSVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVWRLPI 608
KRVPL Y AQR SG+ +++ DF+ LF +TH ++LFF+S G VYK KV+ LP
Sbjct: 516 KRVPLKGYEAQRV-----SGLGLKEGDFLERLFEANTHDTLLFFTSKGRVYKLKVYELPE 570
Query: 609 GSPQARGKALINILSLNQGERITTIMPFPEDESSWNNLYVVFATKHGNVRRNKLSDFIQI 668
GS ++RG+ ++N+LSL +GE+IT ++P +D+ Y+ ATK G V++ LS+F I
Sbjct: 571 GSRRSRGEPIVNLLSLEKGEKITAVLPVNDDQ------YLFLATKKGYVKKTSLSEFKNI 624
Query: 669 NRSGKIAMKLDSRDEILSVE-TCTQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVRGI 727
GKIA+KL DE++SV T ++DILL T G+ +RFP S +R GR + GV+GI
Sbjct: 625 RSKGKIAIKLKEGDELVSVSLTSDGDDDILLVTSNGKALRFPESEVRE-MGRGAKGVKGI 683
Query: 728 SLAKGDQVISMAIVLHADADYDERICYMKHMSAQRRLISGDTEEITSLKNDSSVEGNISE 787
L +GD+V+S V+ D
Sbjct: 684 KLKEGDKVVS-LSVVEDDEAK--------------------------------------- 703
Query: 788 ERCQELKLKEQFILTVSEKGFGKRTSSYDFRISNRSGKGIRATDVSKINEIGALVAVFPV 847
+LTV+E+G+GKRT ++ ++ R GKG+ +K N G +VA V
Sbjct: 704 ------------LLTVTERGYGKRTKISEYPVTKRGGKGVILIKGTKRN-RGKVVAAITV 750
Query: 848 NDNDQIILVSDKGTLIRVPVNEIRIASRATKGVVIFSTAKDERVVSVERIRESE 901
+++D+I+L++ +G LIR V+EI I R T+GV + + +DE+VVSV R++E +
Sbjct: 751 DEDDEIMLITSRGKLIRTAVSEISITGRNTQGVKLINLDEDEKVVSVARVKEED 804