RPSBLAST alignment for GI: 254780182 and conserved domain: KOG0355
>gnl|CDD|35576 KOG0355, KOG0355, KOG0355, DNA topoisomerase type II [Chromatin structure and dynamics]. Length = 842
Score = 121 bits (305), Expect = 7e-28
Identities = 68/628 (10%), Positives = 143/628 (22%), Gaps = 51/628 (8%)
Query: 13 EKGITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYV 72
+ V+I E + I + + + L + K
Sbjct: 73 KMNTIKVTIDKEKNEISVYNNGKGIPVTIHKVEKVYVPELIFGNLLTSSNYDDDEKKVTG 132
Query: 73 KCARISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTE 132
++ + D +MA + + + D YT+
Sbjct: 133 GRNGYGAKLCNIFSTEFTVETADREYKMAFKQTWINNMTRDEEPKIVPSTDED----YTK 188
Query: 133 CRLQ-KAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATNIP 191
F + +L D V V N N
Sbjct: 189 ITFSPDLEKFKMKELDDDIVALMARRAYDLAGSVKSVKVELN-GKNIPVKGFYDYVKMYL 247
Query: 192 THNLGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIR 251
+ + + + F V + T +V +
Sbjct: 248 EVLWLNDD---LKPLHEVLNFRWEVALALSDVGFQQ--VSFVNSIATTKGGTHVDYVVDQ 302
Query: 252 GVSHIEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYRVV 311
V+ + ++ + K + + L+ R + +
Sbjct: 303 IVAKLIDVVKKKKVKKDISVKPFQVKNHLWVFVNCLIENPTFESQTKERLTLRPKRFGSD 362
Query: 312 IELKRGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVR 371
EL + I + + L + L + + + + +
Sbjct: 363 CELSEKFTK-AIELKGVVESILSKSLNKYKDDLAKKRGKLTSRSKGIPKLEDANDAGTKT 421
Query: 372 RTK-YLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIKDL 430
K L+ D A L AV+ L V R + ++
Sbjct: 422 SEKCTLILTEGDSAKSL-----AVSGLSVVGR-----------------DYYGVFPLRGK 459
Query: 431 IDLIDDSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDI 490
+ + ++S+ L + AI+++ + L + I D
Sbjct: 460 LLNVREASHKQI------LKNAEINAIIKILGLQYKKK--YFDVESLRYGKLMIMTDQDH 511
Query: 491 LSSRSRLLGIIKQELLSVKDELDTPRRTRIVEGLLDMEDEDCIVREDMVVTVSHLGYVKR 550
S + L +I L P + ++ V S Y K
Sbjct: 512 DGSHIKGL-LINFIHHFWPSLLQIPFLEEFITPIVKATKGK-----QEVSFYSLPEYEKW 565
Query: 551 VPLSVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVWRLPIGS 610
+ + K G+ + F +LF G +
Sbjct: 566 KK-NTDNWKSWKIKYYKGLGTSTSKEAKEYFSDLDRHRILFKYDGGIDDEAIDMAFSKKK 624
Query: 611 PQARGKALINILSLNQGERITTIMPFPE 638
AR + L + + T + +
Sbjct: 625 IDARKEWLRKYMPEYLY-KTTKFVTISD 651