RPSBLAST alignment of GI: 254780182 and protein with PDBid: 2inr
>2inr_A DNA topoisomerase 4 subunit A; topoisomerase II fold; HET: DNA; 2.80A {Staphylococcus aureus} Length = 514
Score = 534 bits (1377), Expect = e-152
Identities = 207/518 (39%), Positives = 319/518 (61%), Gaps = 26/518 (5%)
Query: 11 EEEKGITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKK 70
E + I +S+ D + + + Y+ +I RA+PD+RDGLKPV RRIL+ M G +K
Sbjct: 23 EVSEIIQDLSLEDVLGDRFGRYSKYIIQERALPDVRDGLKPVQRRILYAMYSSGNTHDKN 82
Query: 71 YVKCARISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERY 130
+ K A+ G+V+G+YHPHG++++Y+A+ R++QDW LR +LIE GN GS+D DPPAA RY
Sbjct: 83 FRKSAKTVGDVIGQYHPHGDSSVYEAMVRLSQDWKLRHVLIEMHGNNGSIDNDPPAAMRY 142
Query: 131 TECRLQKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATNI 190
TE +L A LL D+ K+TV F PNYD + EP+VL +R+PN+LVNG GI+ G AT+I
Sbjct: 143 TEAKLSLLAEELLRDINKETVSFIPNYDDTTLEPMVLPSRFPNLLVNGSTGISAGYATDI 202
Query: 191 PTHNLGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVI 250
P HNL EV+ + IDNPDI ++ LM+ I+GPDFPTG +I G GIK AY +G+G I++
Sbjct: 203 PPHNLAEVIQATLKYIDNPDITVNQLMKYIKGPDFPTGGIIQGIDGIKKAYESGKGRIIV 262
Query: 251 RGVSHIEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYRV 310
R E R+Q+++TEIPY+VNK++++++I EL +K++ I ++RDE+DR G R+
Sbjct: 263 RSKVEEETLRNGRKQLIITEIPYEVNKSSLVKRIDELRADKKVDGIVEVRDETDRTGLRI 322
Query: 311 VIELKRGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVV 370
IELK+ +++ I N LY+ + LQ ++ NMVA++ +P+ + I+ +++ + EVV
Sbjct: 323 AIELKKDVNSESIKNYLYKNSDLQISYNFNMVAISDGRPKLMGIRQIIDSYLNHQIEVVA 382
Query: 371 RRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIKDL 430
RTK+ L+ A R H++ GL A++ LD+V+ +IR S N A+ L++
Sbjct: 383 NRTKFELDNAEKRMHIVEGLIKALSILDKVIELIRSSKNKRDAKENLIEV---------- 432
Query: 431 IDLIDDSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDI 490
+E Q AI+ L+L RLT + E L IK+ I
Sbjct: 433 ----------------YEFTEEQAEAIVMLQLYRLTNTDIVALEGEHKELEALIKQLRHI 476
Query: 491 LSSRSRLLGIIKQELLSVKDELDTPRRTRIVEGLLDME 528
L + LL +IK+EL +K + + R + I + +++
Sbjct: 477 LDNHDALLNVIKEELNEIKKKFKSERLSLIEAEIEEIK 514