RPSBLAST alignment of GI: 254780182 and protein with PDBid: 2nov

>2nov_A DNA topoisomerase 4 subunit A; protein, PARC, TOPO IV, GRAM-positive bacteria, quinolone target, DNA binding, DNA cleavage; HET: DNA; 2.67A {Streptococcus pneumoniae} PDB: 3foe_A* 3fof_A* Length = 496
 Score =  481 bits (1240), Expect = e-136
 Identities = 213/513 (41%), Positives = 317/513 (61%), Gaps = 26/513 (5%)

Query: 16  ITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCA 75
           I ++S+ D M   +  Y+  +I  RA+PD+RDGLKPV RRIL+ M +    ++K Y K A
Sbjct: 4   IQNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRRILYSMNKDSNTFDKSYRKSA 63

Query: 76  RISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRL 135
           +  G +MG +HPHG+++IYDA+ RM+Q+W  R +L+E  GN GS+DGDPPAA RYTE RL
Sbjct: 64  KSVGNIMGNFHPHGDSSIYDAMVRMSQNWKNREILVEMHGNNGSMDGDPPAAMRYTEARL 123

Query: 136 QKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATNIPTHNL 195
            + A +LL D+ K TV F  N+D + +EP VL A +PN+LVNG  GI+ G AT+IP HNL
Sbjct: 124 SEIAGYLLQDIEKKTVPFAWNFDDTEKEPTVLPAAFPNLLVNGSTGISAGYATDIPPHNL 183

Query: 196 GEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIRGVSH 255
            EV+D  V +ID+P   +D LME + GPDFPTGA+I GR  IK AY TG+G +V+R  + 
Sbjct: 184 AEVIDAAVYMIDHPTAKIDKLMEFLPGPDFPTGAIIQGRDEIKKAYETGKGRVVVRSKTE 243

Query: 256 IEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYRVVIELK 315
           IEK  G +EQIV+TEIPY++NKA +++KI ++    ++  IA++RDESDR G R+ IELK
Sbjct: 244 IEKLKGGKEQIVITEIPYEINKANLVKKIDDVRVNNKVAGIAEVRDESDRDGLRIAIELK 303

Query: 316 RGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKY 375
           + A+ +++LN L++YT LQ  ++ NMVA++ + P +  ++ IL +++A R EV++ R+++
Sbjct: 304 KDANTELVLNYLFKYTDLQINYNFNMVAIDNFTPRQVGIVPILSSYIAHRREVILARSRF 363

Query: 376 LLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIKDLIDLID 435
              KA  R H++ GL   ++ LDEV+ +IR S N   A+  L                  
Sbjct: 364 DKEKAEKRLHIVEGLIRVISILDEVIALIRASENKADAKENLKVS--------------- 408

Query: 436 DSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDILSSRS 495
                         +E Q  AI+ L+L RLT      ++ E   L  +I     I+    
Sbjct: 409 -----------YDFTEEQAEAIVTLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIGDER 457

Query: 496 RLLGIIKQELLSVKDELDTPRRTRIVEGLLDME 528
            +  ++K+EL  VK +  TPR + + +    +E
Sbjct: 458 TMYNLMKKELREVKKKFATPRLSSLEDTAKALE 490