RPSBLAST alignment of GI: 254780182 and protein with PDBid: 3ilw
>3ilw_A DNA gyrase subunit A; DNA topology, topoisomerase, antibiotic resistance, breakage-reunion domain, structural genomics; HET: DNA; 1.60A {Mycobacterium tuberculosis} Length = 470
Score = 498 bits (1284), Expect = e-141
Identities = 224/491 (45%), Positives = 310/491 (63%), Gaps = 31/491 (6%)
Query: 36 VILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCARISGEVMGKYHPHGNAAIYD 95
VI+GRA+P++RDGLKPVHRR+L+ M G ++ + K AR E MG YHPHG+A+IYD
Sbjct: 5 VIVGRALPEVRDGLKPVHRRVLYAMFDSGFRPDRSHAKSARSVAETMGNYHPHGDASIYD 64
Query: 96 ALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRLQKAAHFLLDDLGKDTVDFRP 155
+L RMAQ WSLR L++GQGNFGS DPPAA RYTE RL A +L ++ ++TVDF P
Sbjct: 65 SLVRMAQPWSLRYPLVDGQGNFGSPGNDPPAAMRYTEARLTPLAMEMLREIDEETVDFIP 124
Query: 156 NYDGSFQEPVVLCARYPNVLVNGGGGIAVGMATNIPTHNLGEVVDGCVAVIDNPDIDLD- 214
NYDG QEP VL +R+PN+L NG GGIAVGMATNIP HNL E+ D ++N D D +
Sbjct: 125 NYDGRVQEPTVLPSRFPNLLANGSGGIAVGMATNIPPHNLRELADAVFWALENHDADEEE 184
Query: 215 ---ALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIRGVSHIEKTSGDREQIVVTEI 271
A+M ++GPDFPT +I+G G +AY TGRGSI +RGV +E+ S R +V+TE+
Sbjct: 185 TLAAVMGRVKGPDFPTAGLIVGSQGTADAYKTGRGSIRMRGVVEVEEDSRGRTSLVITEL 244
Query: 272 PYQVNKAAMLEKIAELVREKRIVDIADLRDE-SDRQGYRVVIELKRGASADVILNQLYRY 330
PYQVN + IAE VR+ ++ I+++ D+ SDR G R+VIE+KR A A V++N LY++
Sbjct: 245 PYQVNHDNFITSIAEQVRDGKLAGISNIEDQSSDRVGLRIVIEIKRDAVAKVVINNLYKH 304
Query: 331 TSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKYLLNKARDRAHVLVGL 390
T LQ+ F NM+A+ P L +++ +V + +V+VRRT Y L KA +RAH+L GL
Sbjct: 305 TQLQTSFGANMLAIVDGVPRTLRLDQLIRYYVDHQLDVIVRRTTYRLRKANERAHILRGL 364
Query: 391 AIAVANLDEVVRIIRFSPNPETARRELMQRSWNASDIKDLIDLIDDSSYTIGSDGTMYLS 450
A+ LDEV+ +IR S + AR L++ + +
Sbjct: 365 VKALDALDEVIALIRASETVDIARAGLIEL--------------------------LDID 398
Query: 451 EVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDILSSRSRLLGIIKQELLSVKD 510
E+Q +AIL+++L RL L R I ++L + EI + DIL+ R GI++ EL + D
Sbjct: 399 EIQAQAILDMQLRRLAALERQRIIDDLAKIEAEIADLEDILAKPERQRGIVRDELAEIVD 458
Query: 511 ELDTPRRTRIV 521
RRTRI+
Sbjct: 459 RHGDDRRTRII 469