RPSBLAST alignment of GI: 254780182 and protein with PDBid: 3l6v
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV} Length = 370
Score = 312 bits (799), Expect = 3e-85
Identities = 133/380 (35%), Positives = 202/380 (53%), Gaps = 24/380 (6%)
Query: 531 DCIVREDMVVTVSHLGYVKRVPLSVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVL 590
D I ED+VVT+SH GY KR P+S YRAQRRGG+GRS ++EDF+ L++V+TH ++L
Sbjct: 2 DLIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLL 61
Query: 591 FFSSLGFVYKEKVWRLPIGSPQARGKALINILSLNQGERITTIMPFPEDESSWNNLYVVF 650
F+S G V+ V +LP ARG+ +IN + L GER+ ++P E +N YV
Sbjct: 62 TFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPVREY---ADNRYVFM 118
Query: 651 ATKHGNVRRNKLSDFIQINRSGKIAMKLDSRDEILSVETCTQENDILLTTKLGQCVRFPI 710
AT++G V++ LS+F GKIA+ LD D ++ V + D+LL G+ VRF
Sbjct: 119 ATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGE 178
Query: 711 SAIRVFAGRNSVGVRGISLAKGDQVISMAIVLHADADYDERICYMKHMSAQRRLISGDTE 770
S +R GR + GVRGI LAKG++V+S+ + A DE E
Sbjct: 179 STVRSM-GRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEV------------------E 219
Query: 771 EITSLKNDSSVEGNISEERCQELKLKEQFILTVSEKGFGKRTSSYDFRISNRSGKGIRAT 830
+ ++ + + +G +ILT +E G+GKRT ++ R +G+
Sbjct: 220 DESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGI 279
Query: 831 DVSKINEIGALVAVFPVNDNDQIILVSDKGTLIRVPVNEIRIASRATKGVVIFSTAKDER 890
++ N LV + D+++L+SD GTL+R +EI R T+GV + +K E+
Sbjct: 280 QTTERNGK--LVRAVLLGSTDEVMLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEK 337
Query: 891 VVSVERIRESEIVDEAESTE 910
+ +VER+ S E E
Sbjct: 338 LQAVERLDASLEEPEDVVDE 357