HHsearch alignment for GI: 254780183 and conserved domain: PRK00448
>PRK00448 polC DNA polymerase III PolC; Validated.
Probab=94.88 E-value=0.13 Score=29.97 Aligned_cols=72 Identities=22% Similarity=0.363 Sum_probs=54.2
Q ss_pred CCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHH--HHHHHHHHHCCCCCEEEEE
Q ss_conf 78379999642588667986999869999998345642026884530112430211015--8987722110477159998
Q gi|254780183|r 4 SLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSE--ELCRIVEQYLRKGSKVYIE 81 (159)
Q Consensus 4 ~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~--~~Ae~~~~~l~KG~~V~V~ 81 (159)
T Consensus 233 ~~~~v~v~G~vf~-~e~~~~k~g~~i~~~~it--------------D~t~si~~k~f~~~~~~~~~~-~~i~~g~~v~v~ 296 (1436)
T PRK00448 233 EERRVVVEGYVFK-KEIKELKSGRHILTFKIT--------------DYTSSITVKKFLRDKEDLKKF-DEIKKGDWVKVR 296 (1436)
T ss_pred CCCEEEEEEEEEE-EEEEECCCCCEEEEEEEE--------------ECCCCEEEEEECCCCCHHHHH-HHCCCCCEEEEE
T ss_conf 2581899999986-674431579879999998--------------268868999944763327898-516799789999
Q ss_pred ECCCCCCCCC
Q ss_conf 4133333204
Q gi|254780183|r 82 GSLQTRKWQD 91 (159)
Q Consensus 82 Grl~~~~~~~ 91 (159)
T Consensus 297 g~~~~d~~~~ 306 (1436)
T PRK00448 297 GSVQNDTFTR 306 (1436)
T ss_pred EEEEECCCCC
T ss_conf 9985126777