HHsearch alignment for GI: 254780183 and conserved domain: PRK07279

>PRK07279 dnaE DNA polymerase III DnaE; Reviewed.
Probab=91.73  E-value=0.93  Score=24.85  Aligned_cols=78  Identities=17%  Similarity=0.420  Sum_probs=52.1

Q ss_pred             CEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf             37999964258866798699986999999834564202688453011243021101589877221104771599984133
Q gi|254780183|r    6 NKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYIEGSLQ   85 (159)
Q Consensus         6 N~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V~Grl~   85 (159)
T Consensus       885 ~~~~~~g~i~~-v~~~~tk~g~~maf~tl--------------eD~tg~ie~vvFp~~-y~~~~~~l~~~~~v~v~G~v~  948 (1033)
T PRK07279        885 SEATILVQIQS-IRIIRTKTGQQMAFLSV--------------NDTKKKLDVTLFPET-YRQYKDELKEGKFYYLKGKIQ  948 (1033)
T ss_pred             CCCEEEEEEEE-EEEEECCCCCEEEEEEE--------------EECCCCEEEEECHHH-HHHHHHHHCCCCEEEEEEEEE
T ss_conf             96279999988-89987798996999999--------------989986899986799-999999853598899999999


Q ss_pred             CCCCCCCCCCEEEEEEEEEEEEE
Q ss_conf             33320468837688999997769
Q gi|254780183|r   86 TRKWQDQSGNNRYTTEIIMRSMV  108 (159)
Q Consensus        86 ~~~~~~kdG~~r~~~~V~a~~i~  108 (159)
T Consensus       949 ~r-----~~~----~~li~~~i~  962 (1033)
T PRK07279        949 ER-----DGR----LQMVLQQIQ  962 (1033)
T ss_pred             EE-----CCE----EEEEHHHHH
T ss_conf             65-----998----999876412