HHsearch alignment for GI: 254780183 and conserved domain: PRK13480

>PRK13480 3'-5' exoribonuclease YhaM; Provisional.
Probab=92.29  E-value=0.18  Score=29.09  Aligned_cols=72  Identities=11%  Similarity=0.207  Sum_probs=49.1

Q ss_pred             ECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
Q ss_conf             25886679869998699999983456420268845301124302110158987722110477159998413333320468
Q gi|254780183|r   14 LGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYIEGSLQTRKWQDQS   93 (159)
Q Consensus        14 l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V~Grl~~~~~~~kd   93 (159)
T Consensus        19 lv~~~~~~~tknG~~Yl~l~L~------D--------~tG~I~ak~W~~--~~~~~~~~~~g~~V~v~G~v~--~y~---   77 (314)
T PRK13480         19 LIKSATKGVASNGKPFLTLILQ------D--------KSGDIEAKLWDV--SKEDEATYVPETIVHVKGDII--NYR---   77 (314)
T ss_pred             EEEECHHHCCCCCCCEEEEEEE------C--------CCCEEEEEECCC--CHHHHHHCCCCCEEEEEEEEE--EEC---
T ss_conf             9987143318999814799998------3--------787688996789--866686378998899999998--768---


Q ss_pred             CCEEEEEEEEEEEEEEC
Q ss_conf             83768899999776984
Q gi|254780183|r   94 GNNRYTTEIIMRSMVML  110 (159)
Q Consensus        94 G~~r~~~~V~a~~i~~l  110 (159)
T Consensus        78 g----~~Ql~i~~i~~~   90 (314)
T PRK13480         78 G----RKQLKVNQIRLA   90 (314)
T ss_pred             C----CCCEEEEEEEEC
T ss_conf             9----862588885767