HHsearch alignment for GI: 254780183 and conserved domain: pfam00436

>pfam00436 SSB Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.

Probab=99.97  E-value=2e-30  Score=201.46  Aligned_cols=104  Identities=42%  Similarity=0.766  Sum_probs=98.1

Q ss_pred             CCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             83799996425886679869998699999983456420268845301124302110158987722110477159998413
Q gi|254780183|r    5 LNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYIEGSL   84 (159)
Q Consensus         5 mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V~Grl   84 (159)
T Consensus         1 mN~v~l~G~l~~dpe~r~~~~g~~~~~f~va~~~~~~~~~-~~~~~~t~~~~v~~~g~-~A~~~~~~l~KG~~V~V~G~l   78 (104)
T pfam00436         1 MNKVILVGRLTRDPELRYTPNGNAVANFTLAVNRRFKDQN-GESDEETDFIRVVVWGK-LAENAAEYLKKGSLVYVEGRL   78 (104)
T ss_pred             CCEEEEEEEECCCCEEEECCCCCEEEEEEEEEEECCCCCC-CCCCCCCEEEEEEECCH-HHHHHHHCCCCCCEEEEEEEE
T ss_conf             9699999990569899996899889999999960213467-87024558998773054-465431227899799999997


Q ss_pred             CCCCCCCCCCCEEEEEEEEEEEEEEC
Q ss_conf             33332046883768899999776984
Q gi|254780183|r   85 QTRKWQDQSGNNRYTTEIIMRSMVML  110 (159)
Q Consensus        85 ~~~~~~~kdG~~r~~~~V~a~~i~~l  110 (159)
T Consensus        79 ~~~~~~~~~G~~r~~~~v~~~~i~~l  104 (104)
T pfam00436        79 RTRKYEDQEGQKRYVTEIVADNVQFL  104 (104)
T ss_pred             EEEEEECCCCCEEEEEEEEEEEEEEC
T ss_conf             81137999998999999999999949