HHsearch alignment of GI: 254780183 and MMDB domain: 1z9f_A_
>1z9f_A (A:) Single-strand binding protein; TM0604, single stranded DNA-binding protein, structural genomics, joint center for structural genomics, JCSG; 2.30A {Thermotoga maritima}
Probab=100.00 E-value=1.1e-34 Score=226.54 Aligned_cols=141 Identities=26% Similarity=0.512 Sum_probs=119.0
Q ss_pred CCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 87783799996425886679869998699999983456420268845301124302110158987722110477159998
Q gi|254780183|r 2 VASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYIE 81 (159)
Q Consensus 2 m~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V~ 81 (159)
|+.||+|+|+|||++|||+|++++|..+++|+||++++|+++.+ .+...++||+|++||+ +|+++++||+||++|+|+
T Consensus 13 m~~mn~v~l~G~l~~dpei~~~~~g~~~~~~~la~~~~~~~~~~-~~~~~t~~~~v~~~g~-~A~~~~~~l~KG~~V~V~ 90 (153)
T 1z9f_A 13 MSFFNKIILIGRLVRDPEERYTLSGTPVTTFTIAVDRVPRKNAP-DDAQTTDFFRIVTFGR-LAEFARTYLTKGRLVLVE 90 (153)
T ss_dssp CSCCCCEEEEEEESSCCEEEECC--CEEEEEEEEEEC------------CEEEEEEEEEHH-HHHHHHHHCCTTCEEEEE
T ss_pred HHHCCEEEEEEEECCCCEEEECCCCCEEEEEEEEEECCCCCCCC-CCCEEEEEEEEEECCC-CCHHHHHHCCCCCEEEEE
T ss_conf 50478899999937798899889998899998877042014677-4210101244453000-000111201588489999
Q ss_pred ECCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 413333320468837688999997769846677766667777777766777655666666765445677877455798
Q gi|254780183|r 82 GSLQTRKWQDQSGNNRYTTEIIMRSMVMLDGRRDSLQGEEQRSEQHSNNLKENVVGNRYSSPREESVFSDELDDEIPF 159 (159)
Q Consensus 82 Grl~~~~~~~kdG~~r~~~~V~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDdiPF 159 (159)
|+|+.++|++++|++++.++|+|++|.+|..+..........+.. .+....+..+..||||||
T Consensus 91 G~l~~~~~~~~~G~~~~~~~i~a~~i~~l~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~dddlPF 153 (153)
T 1z9f_A 91 GEMRMRRWETPTGEKRVSPEVVANVVRFMDRKPAETVSETEEELE---------------IPEEDFSSDTFSEDEPPF 153 (153)
T ss_dssp EEEEEEC-------CCCEEEEEEEEEEECC------------------------------------------------
T ss_pred EEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCC---------------CCCCCCCCCCCCCCCCCC
T ss_conf 966643789999989999999994899876777666566677778---------------886666788877788998