HHsearch alignment of GI: 254780183 and MMDB domain: 2hpi_A_1024-1128
>2hpi_A (A:1024-1128) DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=96.16 E-value=0.013 Score=35.56 Aligned_cols=81 Identities=16% Similarity=0.270 Sum_probs=58.6
Q ss_pred CEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 37999964258866798699986999999834564202688453011243021101589877221104771599984133
Q gi|254780183|r 6 NKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYIEGSLQ 85 (159)
Q Consensus 6 N~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V~Grl~ 85 (159)
..|.+.|-|.. ...+.+.+|..++-++|. |.+.-+.|++|.+. -+.....|..|..|+|+|++.
T Consensus 20 ~~v~i~G~v~~-~~~~~tk~G~~~a~~~le--------------D~tg~~e~~~F~~~-~~~~~~~l~~~~~v~i~g~v~ 83 (105)
T 2hpi_A 20 PKVLLSGMVEE-VVRKPTRSGGMMARFTLS--------------DETGALEVVVFGRA-YEGVSPKLKEDIPLLVLAEVE 83 (105)
T ss_dssp CEEEEEEEECC-C------------CEEEE--------------ETTEEEEEC--------------CTTCEEEEEEEEC
T ss_pred CEEEEEEEEEE-EEECCCCCCCEEEEEEEE--------------ECCCCEEEEECHHH-HHHHHHHHCCCCEEEEEEEEE
T ss_conf 78999999989-997017899979999999--------------89987899984799-999988851498799999999
Q ss_pred CCCCCCCCCCEEEEEEEEEEEEEECCC
Q ss_conf 333204688376889999977698466
Q gi|254780183|r 86 TRKWQDQSGNNRYTTEIIMRSMVMLDG 112 (159)
Q Consensus 86 ~~~~~~kdG~~r~~~~V~a~~i~~l~~ 112 (159)
.+. .+.+.++.+..|+.
T Consensus 84 ~~~----------~~~l~v~~i~~l~~ 100 (105)
T 2hpi_A 84 KGE----------ELRVLAQAVWTLEE 100 (105)
T ss_dssp ---------------CEEEEEEEEHHH
T ss_pred ECC----------CEEEEEEECCCHHH
T ss_conf 789----------52899966365999