HHsearch alignment of GI: 254780183 and MMDB domain: 2hpi_A_1024-1128

>2hpi_A (A:1024-1128) DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=96.16  E-value=0.013  Score=35.56  Aligned_cols=81  Identities=16%  Similarity=0.270  Sum_probs=58.6

Q ss_pred             CEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf             37999964258866798699986999999834564202688453011243021101589877221104771599984133
Q gi|254780183|r    6 NKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYIEGSLQ   85 (159)
Q Consensus         6 N~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V~Grl~   85 (159)
                      ..|.+.|-|.. ...+.+.+|..++-++|.              |.+.-+.|++|.+. -+.....|..|..|+|+|++.
T Consensus        20 ~~v~i~G~v~~-~~~~~tk~G~~~a~~~le--------------D~tg~~e~~~F~~~-~~~~~~~l~~~~~v~i~g~v~   83 (105)
T 2hpi_A           20 PKVLLSGMVEE-VVRKPTRSGGMMARFTLS--------------DETGALEVVVFGRA-YEGVSPKLKEDIPLLVLAEVE   83 (105)
T ss_dssp             CEEEEEEEECC-C------------CEEEE--------------ETTEEEEEC--------------CTTCEEEEEEEEC
T ss_pred             CEEEEEEEEEE-EEECCCCCCCEEEEEEEE--------------ECCCCEEEEECHHH-HHHHHHHHCCCCEEEEEEEEE
T ss_conf             78999999989-997017899979999999--------------89987899984799-999988851498799999999


Q ss_pred             CCCCCCCCCCEEEEEEEEEEEEEECCC
Q ss_conf             333204688376889999977698466
Q gi|254780183|r   86 TRKWQDQSGNNRYTTEIIMRSMVMLDG  112 (159)
Q Consensus        86 ~~~~~~kdG~~r~~~~V~a~~i~~l~~  112 (159)
                      .+.          .+.+.++.+..|+.
T Consensus        84 ~~~----------~~~l~v~~i~~l~~  100 (105)
T 2hpi_A           84 KGE----------ELRVLAQAVWTLEE  100 (105)
T ss_dssp             ---------------CEEEEEEEEHHH
T ss_pred             ECC----------CEEEEEEECCCHHH
T ss_conf             789----------52899966365999