HHsearch alignment of GI: 254780183 and MMDB domain: 3dm3_A_
>3dm3_A (A:) Replication factor A; probably plays AN essential for replication of the chromosome, DNA recombination and repair; 2.40A {Methanocaldococcus jannaschii}
Probab=91.04 E-value=1.1 Score=24.02 Aligned_cols=64 Identities=14% Similarity=0.091 Sum_probs=43.5
Q ss_pred CEEEEEEEECCCC--EEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEEEE-
Q ss_conf 3799996425886--6798699986999999834564202688453011243021101589877221104771599984-
Q gi|254780183|r 6 NKVILIGNLGADP--DVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYIEG- 82 (159)
Q Consensus 6 N~v~l~G~l~~dP--elr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V~G- 82 (159)
..|.++|.+.+-- ....+.+|.....+.+-+ .|.|..+.+++|+.+ +. ..++.|+.|.+.|
T Consensus 15 ~~v~v~g~V~~~~~~~~~~~~~g~~~~~~~~~i------------~D~Tg~i~~t~w~~~-~~---~~l~~g~~v~i~g~ 78 (105)
T 3dm3_A 15 MTATFEGEVISALPIKEFKRADGSIGKLKSFIV------------RDETGSIRVTLWDNL-TD---IDVGRGDYVRVRGY 78 (105)
T ss_dssp EEEEEEEEEEEEEEEEEEECTTSCEEEEEEEEE------------EETTEEEEEEEEGGG-GG---SCCCTTCEEEEEEE
T ss_pred CEEEEEEEEEECCCCEEEECCCCCEEEEEEEEE------------ECCCCEEEEEEECCC-CC---CCCCCCCEEEEEEE
T ss_conf 858999999982587479926998889999999------------849981999996352-22---55899999999708
Q ss_pred CCC
Q ss_conf 133
Q gi|254780183|r 83 SLQ 85 (159)
Q Consensus 83 rl~ 85 (159)
++.
T Consensus 79 ~v~ 81 (105)
T 3dm3_A 79 IRE 81 (105)
T ss_dssp EEE
T ss_pred EEC
T ss_conf 973