HHsearch alignment of GI: 254780183 and MMDB domain: 3koj_A_
>3koj_A (A:) Uncharacterized protein YCF41; single-strand binding protein family, PF00436, SNR59A, NESG, structural genomics, PSI-2; 1.90A {Synechococcus elongatus pcc 6301}
Probab=99.94 E-value=2.5e-26 Score=176.73 Aligned_cols=101 Identities=18% Similarity=0.264 Sum_probs=92.9
Q ss_pred CC-CCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf 98-77837999964258866798699986999999834564202688453011243021101589877221104771599
Q gi|254780183|r 1 MV-ASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVY 79 (159)
Q Consensus 1 mm-~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~ 79 (159)
|| .++|+|+|+|||++||++|++++|..++.|++++++++. +++.++||+|++||+ +|+++++||+||++|+
T Consensus 6 ~~~~~~N~v~l~G~l~~dp~~~~t~~g~~~~~~~~~~~~~~~------~~~~~~~i~v~~wg~-~Ae~~~~~l~KG~~V~ 78 (108)
T 3koj_A 6 HHHSHXNSCILQATVVEAPQLRYAQDNQTPVAEXVVQFPGLS------SKDAPARLKVVGWGA-VAQELQDRCRLNDEVV 78 (108)
T ss_dssp -CCSSCEEEEEEEEEEEEEEEEECTTSSSEEEEEEEEECC-----------CCEEEEEEEETH-HHHHHHHHCCTTCEEE
T ss_pred CCHHHCCEEEEEEEECCCCEEEECCCCCEEEEEEEEEECCCC------CCCCCEEEEEEEEHH-HHHHHHHHCCCCCEEE
T ss_conf 554228999999998779768882899879999999968984------578976999999789-9999998608999999
Q ss_pred EEECCCCCCCCCCCCCEEEEEEEEEEEEE
Q ss_conf 98413333320468837688999997769
Q gi|254780183|r 80 IEGSLQTRKWQDQSGNNRYTTEIIMRSMV 108 (159)
Q Consensus 80 V~Grl~~~~~~~kdG~~r~~~~V~a~~i~ 108 (159)
|+|+|+.++|+++||++++.++|+|++|.
T Consensus 79 V~G~l~~~~~~~~dG~~~~~~~i~a~~i~ 107 (108)
T 3koj_A 79 LEGRLRINSLLKPDGNREKQTELTVTRVH 107 (108)
T ss_dssp EEEEEEEEC--------CCEEEEEEEEEE
T ss_pred EEEEEECEEEECCCCCEEEEEEEEEEECC
T ss_conf 99998780789999989999999999716