HHsearch alignment of GI: 254780183 and MMDB domain: 3ull_A_
>3ull_A (A:) DNA binding protein; DNA replication, mitochondrion, transit peptide; HET: DNA; 2.40A {Homo sapiens}
Probab=99.97 E-value=1e-31 Score=208.84 Aligned_cols=116 Identities=29% Similarity=0.598 Sum_probs=107.6
Q ss_pred CCCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCC-----EEECEEEECCCCCHHHHHHHHHHHCCCC
Q ss_conf 98778379999642588667986999869999998345642026884-----5301124302110158987722110477
Q gi|254780183|r 1 MVASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNE-----RREKTEWHSVIVFSEELCRIVEQYLRKG 75 (159)
Q Consensus 1 mm~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~-----~~d~t~~~~v~~~g~~~Ae~~~~~l~KG 75 (159)
|+.+||+|+|+|||++|||+|++++|.++++|+||++++|+++.+.. +.+.|+||.|++||+++|+++++||+||
T Consensus 10 ~~~~mN~v~l~G~l~~dpel~~~~~g~~~~~f~ia~~~~~~~~~g~~~~~~~~~~~t~~~~vv~~g~~~a~~~~~~l~kG 89 (132)
T 3ull_A 10 LERSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYVKKG 89 (132)
T ss_dssp CCCCEEEEEEEEEECSCCEEECCTTSCCEEEEEEEEEEEECC---------CCEEEEEEEEEEECSTTHHHHHHHHCCTT
T ss_pred ECCCCEEEEEEEECCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEEEEEHHHHHHHHHCCCC
T ss_conf 00782399999988879889986999879999998445301666641125400443409864547405654346524478
Q ss_pred CEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCC
Q ss_conf 15999841333332046883768899999776984667776
Q gi|254780183|r 76 SKVYIEGSLQTRKWQDQSGNNRYTTEIIMRSMVMLDGRRDS 116 (159)
Q Consensus 76 ~~V~V~Grl~~~~~~~kdG~~r~~~~V~a~~i~~l~~~~~~ 116 (159)
++|+|+|+|++++|+++||++++.++|+|++|.+|+.+...
T Consensus 90 ~~v~V~G~l~~~~~~~~dG~~~~~~~i~a~~i~~l~~~~~~ 130 (132)
T 3ull_A 90 SRIYLEGKIDYGEYMDKNNVRRQATTIIADNIIFLSDQTKE 130 (132)
T ss_dssp CEEEEEEEEECCCEESSSSEECCCEEEEEEEEECC------
T ss_pred CEEEEEEEECCCEEECCCCCEEEEEEEEEEEEEECCCCCCC
T ss_conf 89999938823110989998999999999699988898776