HHsearch results for GI: 254780183 and protein with PDBid: 1eqq_A
>1eqq_A Single stranded DNA binding protein; beta barrel, protein-DNA complex, replication/RNA complex; HET: 5MU; 3.20A {Escherichia coli} SCOP: b.40.4.3
Probab=100.00 E-value=2.4e-39 Score=253.37 Aligned_cols=113 Identities=56% Similarity=1.035 Sum_probs=104.3
Q ss_pred CC--CCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf 87--7837999964258866798699986999999834564202688453011243021101589877221104771599
Q gi|254780183|r 2 VA--SLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVY 79 (159)
Q Consensus 2 m~--~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~ 79 (159)
|| +||+|+|+|||++|||+|++++|.++++|+||++++|+++.+++|++.|+||+|+||| ++|+++++||+||++|+
T Consensus 1 m~~~~~N~v~l~G~l~~dPe~r~t~~G~~~~~f~la~~~~~~~~~~~~~~~~t~~~~v~~w~-~~Ae~~~~~l~KG~~V~ 79 (178)
T 1eqq_A 1 MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFG-KLAEVASEYLRKGSQVY 79 (178)
T ss_dssp -CCCCEEEEEEEEEESSSCCCCEETTTEECCCCEEEEEECCCCSSSSSCCCEEEEEEEEECH-HHHHHHHHHCCTTCEEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEECCCCCEEEEEEEEECCCCEECCCCCCCCCCEEEEEEEEC-HHHHHHHHHCCCCCEEE
T ss_conf 98778758999998576988988789988999999972551004788331211589889945-02433455406999899
Q ss_pred EEECCCCCCCCCCCCCEEEEEEEEEE---EEEECCCCCC
Q ss_conf 98413333320468837688999997---7698466777
Q gi|254780183|r 80 IEGSLQTRKWQDQSGNNRYTTEIIMR---SMVMLDGRRD 115 (159)
Q Consensus 80 V~Grl~~~~~~~kdG~~r~~~~V~a~---~i~~l~~~~~ 115 (159)
|+|+|++++|++++|++|+.++|+|+ .+.++.++..
T Consensus 80 V~G~l~~~~~~d~~G~~~~~~~i~~~~~~~l~~~~~~~~ 118 (178)
T 1eqq_A 80 IEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQG 118 (178)
T ss_dssp ECCEEEEEEEECSSSEEEEEEEEECSSSCCEECSCC---
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEEECCCCEEECCCCCC
T ss_conf 998776146888899689999999941685678647666