HHsearch results for GI: 254780183 and protein with PDBid: 1v1q_A
>1v1q_A Primosomal replication protein N; primosome, DNA replication, DNA binding; 2.1A {Escherichia coli} SCOP: b.40.4.3 PDB: 2ccz_A
Probab=99.93 E-value=7.8e-26 Score=172.88 Aligned_cols=111 Identities=14% Similarity=0.193 Sum_probs=93.3
Q ss_pred CCCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 98778379999642588667986999869999998345642026884530112430211015898772211047715999
Q gi|254780183|r 1 MVASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYI 80 (159)
Q Consensus 1 mm~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V 80 (159)
|| +|+|+|+|||++|||+|+|++|.++++|+||+++.+. ..+.+++.+.|++|++||+ +|+.+++||+||++|+|
T Consensus 17 mm--~N~v~L~G~l~~dpelR~Tp~G~~v~~f~La~~s~~~--e~~~~r~~~~~i~vv~~G~-~Ae~~~~~l~KG~~V~V 91 (134)
T 1v1q_A 17 LM--TNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQE--EAGFHRQAWCQMPVIVSGH-ENQAITHSITVGSRITV 91 (134)
T ss_dssp GC--CEEEEEEEEEEEEEEEEECTTCCEEEEEEEEEEEEEE--ETTEEEEEEEEEEEEEEST-GGGGGGTTCCTTCEEEE
T ss_pred CC--EEEEEEEEEECCCCCEEECCCCCEEEEEEEEECCCEE--CCCCEEEEEEEEEEEEECH-HHHHHHHHCCCCCEEEE
T ss_conf 31--0089999997668646799999839999998735260--5896077789999999958-99999975378999999
Q ss_pred EECCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCC
Q ss_conf 8413333320468837688999997769846677766667
Q gi|254780183|r 81 EGSLQTRKWQDQSGNNRYTTEIIMRSMVMLDGRRDSLQGE 120 (159)
Q Consensus 81 ~Grl~~~~~~~kdG~~r~~~~V~a~~i~~l~~~~~~~~~~ 120 (159)
+|+|.+++| ++|+.+. .|.|++|+||+++.......
T Consensus 92 ~G~L~~rs~--kng~~r~--vl~a~~IefLds~~~~~a~~ 127 (134)
T 1v1q_A 92 QGFISCHKA--KNGLSKM--VLHAEQIELIDSVDKLAAAL 127 (134)
T ss_dssp EEEEEEECT--TTTSCEE--EEEEEEEEETTSCSCCCC--
T ss_pred EEEEEEEEC--CCCCCEE--EEEEEEEEEECCCCCCCCHH
T ss_conf 999573106--4899889--99999999803787532012